HEADER MEMBRANE PROTEIN 29-MAR-07 2EP6 TITLE SOLUTION STRUCTURE OF THE SECOND C2 DOMAIN FROM HUMAN MCTP2 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MCTP2 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C2 DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MCTP2; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P060327-19; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS BETA SANDWICH, CA2+ BINDING, MEMBRANE BINDING, STRUCTURAL GENOMICS, KEYWDS 2 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 MEMBRANE PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 4 29-MAY-24 2EP6 1 REMARK REVDAT 3 09-MAR-22 2EP6 1 REMARK SEQADV REVDAT 2 24-FEB-09 2EP6 1 VERSN REVDAT 1 02-OCT-07 2EP6 0 JRNL AUTH T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE SECOND C2 DOMAIN FROM HUMAN MCTP2 JRNL TITL 2 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 2.0.17 REMARK 3 AUTHORS : VARIAN (VNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EP6 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000026935. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.23MM UNIFORMLY 13C, 15N REMARK 210 -LABELED PROTEIN; 20MM TRISHCL, REMARK 210 100MM NACL, 1MM DTT, 0.02% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9822, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 89 42.54 -98.66 REMARK 500 1 VAL A 93 148.00 -36.86 REMARK 500 1 LEU A 104 -74.20 -82.39 REMARK 500 1 ILE A 185 102.68 -47.16 REMARK 500 1 ARG A 186 -60.48 -99.88 REMARK 500 1 PRO A 190 88.91 -69.78 REMARK 500 1 LYS A 198 -35.34 -33.80 REMARK 500 1 ASP A 199 59.07 -90.03 REMARK 500 1 LEU A 200 -29.33 -38.08 REMARK 500 1 PHE A 204 -70.88 -120.76 REMARK 500 1 LYS A 205 132.10 -174.97 REMARK 500 2 LYS A 105 -178.59 -173.77 REMARK 500 2 ALA A 112 -37.22 -39.19 REMARK 500 2 ASP A 119 51.49 -118.09 REMARK 500 2 PRO A 190 91.86 -69.70 REMARK 500 2 ASP A 199 31.55 -84.50 REMARK 500 2 LEU A 200 48.47 34.38 REMARK 500 2 PHE A 204 -70.66 -77.70 REMARK 500 3 LEU A 104 -73.42 -65.40 REMARK 500 3 ASN A 139 126.35 -170.37 REMARK 500 3 ASN A 141 68.56 -115.73 REMARK 500 3 LEU A 175 -63.63 -104.91 REMARK 500 3 SER A 184 -37.76 -35.57 REMARK 500 3 PRO A 190 90.19 -69.77 REMARK 500 3 ASN A 197 174.57 -56.89 REMARK 500 3 PHE A 204 -70.78 -80.24 REMARK 500 4 SER A 87 -60.42 -100.64 REMARK 500 4 LEU A 104 -70.14 -66.85 REMARK 500 4 LEU A 175 -60.95 -109.84 REMARK 500 4 ILE A 185 94.61 -55.86 REMARK 500 4 PRO A 190 89.75 -69.77 REMARK 500 4 LYS A 198 -36.16 -33.33 REMARK 500 4 ASP A 199 64.61 -102.10 REMARK 500 4 LEU A 200 -31.75 -35.26 REMARK 500 4 ALA A 203 175.54 -59.64 REMARK 500 4 PHE A 204 -74.88 -103.72 REMARK 500 4 LYS A 205 106.30 -174.79 REMARK 500 5 LEU A 110 146.94 -37.83 REMARK 500 5 ASP A 119 51.30 -117.40 REMARK 500 5 ASN A 139 120.91 -171.15 REMARK 500 5 ASP A 157 148.72 -36.25 REMARK 500 5 LEU A 175 72.91 -112.43 REMARK 500 5 PRO A 190 91.21 -69.79 REMARK 500 5 ASN A 197 171.53 -52.29 REMARK 500 5 GLU A 201 -57.25 -120.31 REMARK 500 5 LYS A 205 -73.29 -102.89 REMARK 500 6 LEU A 182 -34.63 -37.47 REMARK 500 6 ILE A 185 99.01 -37.06 REMARK 500 6 ARG A 186 -74.40 -72.00 REMARK 500 6 GLN A 189 138.41 -36.66 REMARK 500 REMARK 500 THIS ENTRY HAS 185 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSI002011251.1 RELATED DB: TARGETDB DBREF 2EP6 A 92 217 UNP Q8TAX2 Q8TAX2_HUMAN 92 217 SEQADV 2EP6 GLY A 85 UNP Q8TAX2 EXPRESSION TAG SEQADV 2EP6 SER A 86 UNP Q8TAX2 EXPRESSION TAG SEQADV 2EP6 SER A 87 UNP Q8TAX2 EXPRESSION TAG SEQADV 2EP6 GLY A 88 UNP Q8TAX2 EXPRESSION TAG SEQADV 2EP6 SER A 89 UNP Q8TAX2 EXPRESSION TAG SEQADV 2EP6 SER A 90 UNP Q8TAX2 EXPRESSION TAG SEQADV 2EP6 GLY A 91 UNP Q8TAX2 EXPRESSION TAG SEQRES 1 A 133 GLY SER SER GLY SER SER GLY ASP VAL LYS ASP VAL GLY SEQRES 2 A 133 ILE LEU GLN VAL LYS VAL LEU LYS ALA ALA ASP LEU LEU SEQRES 3 A 133 ALA ALA ASP PHE SER GLY LYS SER ASP PRO PHE CYS LEU SEQRES 4 A 133 LEU GLU LEU GLY ASN ASP ARG LEU GLN THR HIS THR VAL SEQRES 5 A 133 TYR LYS ASN LEU ASN PRO GLU TRP ASN LYS VAL PHE THR SEQRES 6 A 133 PHE PRO ILE LYS ASP ILE HIS ASP VAL LEU GLU VAL THR SEQRES 7 A 133 VAL PHE ASP GLU ASP GLY ASP LYS PRO PRO ASP PHE LEU SEQRES 8 A 133 GLY LYS VAL ALA ILE PRO LEU LEU SER ILE ARG ASP GLY SEQRES 9 A 133 GLN PRO ASN CYS TYR VAL LEU LYS ASN LYS ASP LEU GLU SEQRES 10 A 133 GLN ALA PHE LYS GLY VAL ILE TYR LEU GLU MET ASP LEU SEQRES 11 A 133 ILE TYR ASN HELIX 1 1 LEU A 183 ILE A 185 5 3 SHEET 1 A 4 LYS A 146 ILE A 152 0 SHEET 2 A 4 GLY A 97 ALA A 107 -1 N VAL A 101 O PHE A 148 SHEET 3 A 4 VAL A 207 TYR A 216 -1 O ASP A 213 N GLN A 100 SHEET 4 A 4 ASN A 191 CYS A 192 -1 N ASN A 191 O LEU A 210 SHEET 1 B 4 ASP A 129 GLN A 132 0 SHEET 2 B 4 PRO A 120 LEU A 126 -1 N LEU A 124 O LEU A 131 SHEET 3 B 4 VAL A 158 ASP A 167 -1 O PHE A 164 N PHE A 121 SHEET 4 B 4 LYS A 170 PHE A 174 -1 O LYS A 170 N ASP A 167 SHEET 1 C 4 ASP A 129 GLN A 132 0 SHEET 2 C 4 PRO A 120 LEU A 126 -1 N LEU A 124 O LEU A 131 SHEET 3 C 4 VAL A 158 ASP A 167 -1 O PHE A 164 N PHE A 121 SHEET 4 C 4 ALA A 179 PRO A 181 -1 O ILE A 180 N LEU A 159 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1