HEADER CELL CYCLE 29-MAR-07 2EP8 TITLE SOLUTION STRUCTURE OF THE BRCT DOMAIN FROM HUMAN PESCADILLO HOMOLOG 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PESCADILLO HOMOLOG 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BRCT DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PES1; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P060821-06; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS A/B/A 3 LAYERS, NUCLEOLUS, RIBOSOME BIOGENESIS, DNA DAMAGE, KEYWDS 2 STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL KEYWDS 3 AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 4 INITIATIVE, RSGI, CELL CYCLE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2EP8 1 REMARK SEQADV REVDAT 2 24-FEB-09 2EP8 1 VERSN REVDAT 1 02-OCT-07 2EP8 0 JRNL AUTH T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE BRCT DOMAIN FROM HUMAN PESCADILLO JRNL TITL 2 HOMOLOG 1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 2.0.17 REMARK 3 AUTHORS : VARIAN (VNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EP8 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000026937. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.46MM UNIFORMLY 13C,15N-LABELED REMARK 210 PROTEIN; 20MM TRISHCL, 100MM REMARK 210 NACL, 1MM DTT, 0.02% NAN3; 10% REMARK 210 D2O, 90% H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9822, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 323 52.07 -102.73 REMARK 500 1 LEU A 330 129.72 -35.41 REMARK 500 1 ILE A 346 -72.42 -66.41 REMARK 500 1 THR A 385 -179.85 -63.10 REMARK 500 2 SER A 316 133.60 -170.31 REMARK 500 2 GLU A 341 -39.58 -36.84 REMARK 500 2 THR A 365 -70.51 -117.32 REMARK 500 2 THR A 385 175.81 -50.49 REMARK 500 2 ILE A 388 103.97 -51.21 REMARK 500 2 ARG A 405 42.64 34.42 REMARK 500 3 PHE A 327 41.86 -96.75 REMARK 500 3 GLU A 341 -39.57 -38.07 REMARK 500 3 ALA A 364 171.25 -46.66 REMARK 500 3 THR A 365 -69.81 -101.04 REMARK 500 3 GLN A 383 30.56 -89.19 REMARK 500 3 THR A 385 87.04 -58.33 REMARK 500 3 ARG A 405 37.52 36.56 REMARK 500 3 TYR A 413 49.66 -106.05 REMARK 500 4 PHE A 327 31.31 -87.49 REMARK 500 4 ILE A 346 -70.50 -57.74 REMARK 500 4 GLN A 383 -73.90 -52.93 REMARK 500 4 ILE A 388 104.44 -36.17 REMARK 500 4 ARG A 405 31.45 36.95 REMARK 500 4 LEU A 407 85.66 -66.67 REMARK 500 4 TYR A 413 33.34 -96.06 REMARK 500 5 SER A 316 42.07 -99.29 REMARK 500 5 PHE A 327 37.50 -95.18 REMARK 500 5 ALA A 364 152.11 -44.63 REMARK 500 5 THR A 385 -70.70 -97.36 REMARK 500 5 ILE A 388 99.41 -68.66 REMARK 500 6 PHE A 327 39.37 -91.50 REMARK 500 6 ILE A 346 -72.58 -63.64 REMARK 500 6 ALA A 364 158.32 -38.72 REMARK 500 6 ASP A 370 99.30 -65.70 REMARK 500 6 ILE A 373 120.79 -34.45 REMARK 500 6 PRO A 381 94.46 -69.81 REMARK 500 6 GLN A 383 76.75 -118.26 REMARK 500 6 GLN A 384 105.05 -171.49 REMARK 500 6 THR A 385 46.68 32.90 REMARK 500 6 ILE A 388 100.35 -50.00 REMARK 500 6 LEU A 407 93.94 -69.60 REMARK 500 7 SER A 319 113.31 -162.05 REMARK 500 7 PHE A 327 36.78 -98.00 REMARK 500 7 LEU A 330 125.94 -37.31 REMARK 500 7 THR A 365 -64.82 -108.76 REMARK 500 7 GLN A 384 163.65 -44.82 REMARK 500 7 ILE A 388 116.87 -38.08 REMARK 500 7 ARG A 405 44.24 38.11 REMARK 500 7 LEU A 408 156.45 -46.04 REMARK 500 7 TYR A 413 36.03 -95.30 REMARK 500 REMARK 500 THIS ENTRY HAS 148 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSS001003833.2 RELATED DB: TARGETDB DBREF 2EP8 A 322 414 UNP O00541 PESC_HUMAN 322 414 SEQADV 2EP8 GLY A 315 UNP O00541 EXPRESSION TAG SEQADV 2EP8 SER A 316 UNP O00541 EXPRESSION TAG SEQADV 2EP8 SER A 317 UNP O00541 EXPRESSION TAG SEQADV 2EP8 GLY A 318 UNP O00541 EXPRESSION TAG SEQADV 2EP8 SER A 319 UNP O00541 EXPRESSION TAG SEQADV 2EP8 SER A 320 UNP O00541 EXPRESSION TAG SEQADV 2EP8 GLY A 321 UNP O00541 EXPRESSION TAG SEQRES 1 A 100 GLY SER SER GLY SER SER GLY LYS HIS LYS LYS LEU PHE SEQRES 2 A 100 GLU GLY LEU LYS PHE PHE LEU ASN ARG GLU VAL PRO ARG SEQRES 3 A 100 GLU ALA LEU ALA PHE ILE ILE ARG SER PHE GLY GLY GLU SEQRES 4 A 100 VAL SER TRP ASP LYS SER LEU CYS ILE GLY ALA THR TYR SEQRES 5 A 100 ASP VAL THR ASP SER ARG ILE THR HIS GLN ILE VAL ASP SEQRES 6 A 100 ARG PRO GLY GLN GLN THR SER VAL ILE GLY ARG CYS TYR SEQRES 7 A 100 VAL GLN PRO GLN TRP VAL PHE ASP SER VAL ASN ALA ARG SEQRES 8 A 100 LEU LEU LEU PRO VAL ALA GLU TYR PHE HELIX 1 1 PRO A 339 PHE A 350 1 12 HELIX 2 2 PRO A 395 ARG A 405 1 11 SHEET 1 A 2 LYS A 331 PHE A 333 0 SHEET 2 A 2 GLU A 353 SER A 355 1 O GLU A 353 N PHE A 332 SHEET 1 B 2 HIS A 375 ILE A 377 0 SHEET 2 B 2 CYS A 391 VAL A 393 1 O VAL A 393 N GLN A 376 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1