HEADER TRANSCRIPTION 30-MAR-07 2EPR TITLE SOLUTION STRUCTURE OF THE SECOUND ZINC FINGER DOMAIN OF ZINC FINGER TITLE 2 PROTEIN 278 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POZ-, AT HOOK-, AND ZINC FINGER-CONTAINING PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ZINC FINGER DOMAIN, UNP RESIDUES 350-384; COMPND 5 SYNONYM: ZINC FINGER PROTEIN 278, ZINC FINGER SARCOMA GENE PROTEIN, COMPND 6 BTB-POZ DOMAIN ZINC FINGER TRANSCRIPTION FACTOR, PROTEIN KINASE A RI- COMPND 7 SUBUNIT ALPHA- ASSOCIATED PROTEIN, ZINC FINGER AND BTB DOMAIN- COMPND 8 CONTAINING PROTEIN 19; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PATZ1, PATZ, RIAZ, ZBTB19, ZNF278, ZSG; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P061204-08; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS C2H2, ZINC FINGER DOMAIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL KEYWDS 2 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR W.TANABE,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 29-MAY-24 2EPR 1 REMARK REVDAT 3 09-MAR-22 2EPR 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 2EPR 1 VERSN REVDAT 1 01-APR-08 2EPR 0 JRNL AUTH W.TANABE,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE SECOUND ZINC FINGER DOMAIN OF ZINC JRNL TITL 2 FINGER PROTEIN 278 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.1 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EPR COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000026956. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.25MM 13C-15N PROTEIN; 20MM D REMARK 210 -TRIS-HCL(PH7.0); 100MM NACL; REMARK 210 1MM D-DTT; 0.02% NAN3; 0.05MM REMARK 210 ZNCL2+1MM IDA; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20060702, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 347 -59.92 -120.18 REMARK 500 1 SER A 388 173.69 -59.84 REMARK 500 2 LYS A 381 73.09 56.24 REMARK 500 2 PRO A 387 -176.98 -69.79 REMARK 500 3 PRO A 382 78.84 -69.78 REMARK 500 3 TYR A 383 120.66 -171.60 REMARK 500 3 PRO A 387 -173.82 -69.81 REMARK 500 4 SER A 344 119.80 -169.38 REMARK 500 4 SER A 347 -64.76 -104.46 REMARK 500 4 ARG A 352 148.32 -170.18 REMARK 500 4 PRO A 387 95.48 -69.77 REMARK 500 5 PRO A 382 92.89 -69.73 REMARK 500 5 SER A 384 96.63 -65.94 REMARK 500 5 PRO A 387 -175.97 -69.80 REMARK 500 6 SER A 344 -175.99 -67.59 REMARK 500 6 CYS A 357 108.44 -52.60 REMARK 500 6 SER A 388 67.58 -101.79 REMARK 500 7 LYS A 381 73.65 57.20 REMARK 500 9 SER A 378 -59.16 -126.03 REMARK 500 9 GLU A 380 41.81 -107.25 REMARK 500 10 PRO A 382 -179.22 -69.80 REMARK 500 10 PRO A 387 -171.48 -69.73 REMARK 500 11 LYS A 381 70.62 -119.67 REMARK 500 11 PRO A 382 -174.27 -69.80 REMARK 500 12 GLU A 380 99.13 -61.13 REMARK 500 12 LYS A 381 71.11 -171.39 REMARK 500 12 SER A 388 179.97 -59.38 REMARK 500 13 THR A 351 70.29 -112.67 REMARK 500 13 GLN A 354 174.96 -57.49 REMARK 500 13 CYS A 357 99.80 -56.96 REMARK 500 13 GLU A 380 41.16 -105.52 REMARK 500 13 LYS A 381 73.11 -154.99 REMARK 500 13 PRO A 382 -179.23 -69.78 REMARK 500 14 SER A 388 -178.55 -69.73 REMARK 500 15 LYS A 353 47.77 -93.13 REMARK 500 15 LYS A 381 160.65 63.20 REMARK 500 15 SER A 384 130.83 -172.18 REMARK 500 15 PRO A 387 95.13 -69.73 REMARK 500 16 SER A 345 -62.40 -94.84 REMARK 500 17 LYS A 353 107.39 -54.01 REMARK 500 17 ILE A 359 -71.84 -53.07 REMARK 500 17 PRO A 382 -174.17 -69.78 REMARK 500 17 SER A 389 112.58 -161.50 REMARK 500 18 SER A 344 64.66 -118.54 REMARK 500 18 SER A 345 133.99 -174.48 REMARK 500 18 LYS A 353 -74.32 -115.56 REMARK 500 18 GLN A 354 173.76 -54.89 REMARK 500 18 CYS A 357 96.77 -62.09 REMARK 500 18 ILE A 359 -71.15 -51.63 REMARK 500 19 PRO A 382 -179.92 -69.81 REMARK 500 REMARK 500 THIS ENTRY HAS 52 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 357 SG REMARK 620 2 CYS A 360 SG 106.9 REMARK 620 3 HIS A 373 NE2 115.2 102.1 REMARK 620 4 HIS A 377 NE2 114.4 112.5 105.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSI002013231.1 RELATED DB: TARGETDB DBREF 2EPR A 350 384 UNP Q9HBE1 PATZ1_HUMAN 350 384 SEQADV 2EPR GLY A 343 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPR SER A 344 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPR SER A 345 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPR GLY A 346 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPR SER A 347 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPR SER A 348 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPR GLY A 349 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPR SER A 385 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPR GLY A 386 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPR PRO A 387 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPR SER A 388 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPR SER A 389 UNP Q9HBE1 EXPRESSION TAG SEQADV 2EPR GLY A 390 UNP Q9HBE1 EXPRESSION TAG SEQRES 1 A 48 GLY SER SER GLY SER SER GLY ARG THR ARG LYS GLN VAL SEQRES 2 A 48 ALA CYS GLU ILE CYS GLY LYS ILE PHE ARG ASP VAL TYR SEQRES 3 A 48 HIS LEU ASN ARG HIS LYS LEU SER HIS SER GLY GLU LYS SEQRES 4 A 48 PRO TYR SER SER GLY PRO SER SER GLY HET ZN A 201 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ HELIX 1 1 ASP A 366 LYS A 374 1 9 HELIX 2 2 LEU A 375 HIS A 377 5 3 SHEET 1 A 2 VAL A 355 CYS A 357 0 SHEET 2 A 2 LYS A 362 PHE A 364 -1 O PHE A 364 N VAL A 355 LINK ZN ZN A 201 SG CYS A 357 1555 1555 2.31 LINK ZN ZN A 201 SG CYS A 360 1555 1555 2.27 LINK ZN ZN A 201 NE2 HIS A 373 1555 1555 1.99 LINK ZN ZN A 201 NE2 HIS A 377 1555 1555 1.96 SITE 1 AC1 4 CYS A 357 ILE A 359 CYS A 360 PHE A 364 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1