data_2EQK # _entry.id 2EQK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2EQK pdb_00002eqk 10.2210/pdb2eqk/pdb RCSB RCSB026985 ? ? WWPDB D_1000026985 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsb001011045.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2EQK _pdbx_database_status.recvd_initial_deposition_date 2007-03-30 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dang, W.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Shirouzu, M.' 5 'Terada, T.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the TUDOR domain of Tudor domain-containing protein 4' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dang, W.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Shirouzu, M.' 5 ? primary 'Terada, T.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Tudor domain-containing protein 4' _entity.formula_weight 9708.189 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'TUDOR domain' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGMIAAYENSKWEPVKWENDMHCAVKIQDKNQWRRGQIIRMVTDTLVEVLLYDVGVELVVNVDCLRKLEENLKTM GRLSL ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGMIAAYENSKWEPVKWENDMHCAVKIQDKNQWRRGQIIRMVTDTLVEVLLYDVGVELVVNVDCLRKLEENLKTM GRLSL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsb001011045.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 MET n 1 9 ILE n 1 10 ALA n 1 11 ALA n 1 12 TYR n 1 13 GLU n 1 14 ASN n 1 15 SER n 1 16 LYS n 1 17 TRP n 1 18 GLU n 1 19 PRO n 1 20 VAL n 1 21 LYS n 1 22 TRP n 1 23 GLU n 1 24 ASN n 1 25 ASP n 1 26 MET n 1 27 HIS n 1 28 CYS n 1 29 ALA n 1 30 VAL n 1 31 LYS n 1 32 ILE n 1 33 GLN n 1 34 ASP n 1 35 LYS n 1 36 ASN n 1 37 GLN n 1 38 TRP n 1 39 ARG n 1 40 ARG n 1 41 GLY n 1 42 GLN n 1 43 ILE n 1 44 ILE n 1 45 ARG n 1 46 MET n 1 47 VAL n 1 48 THR n 1 49 ASP n 1 50 THR n 1 51 LEU n 1 52 VAL n 1 53 GLU n 1 54 VAL n 1 55 LEU n 1 56 LEU n 1 57 TYR n 1 58 ASP n 1 59 VAL n 1 60 GLY n 1 61 VAL n 1 62 GLU n 1 63 LEU n 1 64 VAL n 1 65 VAL n 1 66 ASN n 1 67 VAL n 1 68 ASP n 1 69 CYS n 1 70 LEU n 1 71 ARG n 1 72 LYS n 1 73 LEU n 1 74 GLU n 1 75 GLU n 1 76 ASN n 1 77 LEU n 1 78 LYS n 1 79 THR n 1 80 MET n 1 81 GLY n 1 82 ARG n 1 83 LEU n 1 84 SER n 1 85 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene TDRD4 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P060911-18 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TDRD4_HUMAN _struct_ref.pdbx_db_accession Q9NUY9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MIAAYENSKWEPVKWENDMHCAVKIQDKNQWRRGQIIRMVTDTLVEVLLYDVGVELVVNVDCLRKLEENLKTMGRLSL _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2EQK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 85 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9NUY9 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 78 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 85 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2EQK GLY A 1 ? UNP Q9NUY9 ? ? 'expression tag' 1 1 1 2EQK SER A 2 ? UNP Q9NUY9 ? ? 'expression tag' 2 2 1 2EQK SER A 3 ? UNP Q9NUY9 ? ? 'expression tag' 3 3 1 2EQK GLY A 4 ? UNP Q9NUY9 ? ? 'expression tag' 4 4 1 2EQK SER A 5 ? UNP Q9NUY9 ? ? 'expression tag' 5 5 1 2EQK SER A 6 ? UNP Q9NUY9 ? ? 'expression tag' 6 6 1 2EQK GLY A 7 ? UNP Q9NUY9 ? ? 'expression tag' 7 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.0mM 13C, 15N-labeled protein; 20mM d-Tris-HCl (pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2EQK _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2EQK _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, structures with the lowest energy, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2EQK _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.6 Bruker 1 processing NMRPipe 20031121 Delaglio,F. 2 'data analysis' NMRView 5.0.4 Johnson,B.A. 3 'data analysis' KUJIRA 0.9814 Kobayashi,N. 4 'structure solution' CYANA 2.0.17 Guntert,P. 5 refinement CYANA 2.0.17 Guntert,P. 6 # _exptl.entry_id 2EQK _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2EQK _struct.title 'Solution structure of the TUDOR domain of Tudor domain-containing protein 4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2EQK _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;TUDOR domain, Tudor domain-containing protein 4, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSCRIPTION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MET A 8 ? ASN A 14 ? MET A 8 ASN A 14 1 ? 7 HELX_P HELX_P2 2 GLU A 75 ? LYS A 78 ? GLU A 75 LYS A 78 1 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 62 ? ASN A 66 ? GLU A 62 ASN A 66 A 2 LEU A 51 ? LEU A 55 ? LEU A 51 LEU A 55 A 3 TRP A 38 ? MET A 46 ? TRP A 38 MET A 46 A 4 HIS A 27 ? LYS A 31 ? HIS A 27 LYS A 31 A 5 LEU A 70 ? LYS A 72 ? LEU A 70 LYS A 72 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 65 ? O VAL A 65 N VAL A 52 ? N VAL A 52 A 2 3 O GLU A 53 ? O GLU A 53 N ARG A 45 ? N ARG A 45 A 3 4 O ARG A 39 ? O ARG A 39 N VAL A 30 ? N VAL A 30 A 4 5 N ALA A 29 ? N ALA A 29 O ARG A 71 ? O ARG A 71 # _database_PDB_matrix.entry_id 2EQK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2EQK _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 MET 8 8 8 MET MET A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 TYR 12 12 12 TYR TYR A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 ASN 14 14 14 ASN ASN A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 TRP 17 17 17 TRP TRP A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 TRP 22 22 22 TRP TRP A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 MET 26 26 26 MET MET A . n A 1 27 HIS 27 27 27 HIS HIS A . n A 1 28 CYS 28 28 28 CYS CYS A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 GLN 33 33 33 GLN GLN A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 TRP 38 38 38 TRP TRP A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 GLN 42 42 42 GLN GLN A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 MET 46 46 46 MET MET A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 THR 48 48 48 THR THR A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 TYR 57 57 57 TYR TYR A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 ASN 66 66 66 ASN ASN A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 CYS 69 69 69 CYS CYS A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 LYS 78 78 78 LYS LYS A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 MET 80 80 80 MET MET A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 LEU 85 85 85 LEU LEU A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' 5 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_remark.id 650 _pdbx_database_remark.text ;HELIX DETERMINATION METHOD: AUTHOR DETERMINED ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 8 ? ? -58.19 -75.35 2 1 TRP A 17 ? ? -42.31 151.33 3 1 GLN A 33 ? ? -89.85 -71.16 4 1 ILE A 43 ? ? -47.52 94.11 5 1 LEU A 56 ? ? -81.94 48.88 6 1 TYR A 57 ? ? -36.04 -33.91 7 1 THR A 79 ? ? -117.84 78.90 8 1 SER A 84 ? ? -167.80 116.54 9 2 SER A 5 ? ? -43.18 108.52 10 2 MET A 8 ? ? -51.86 -75.39 11 2 TRP A 17 ? ? -38.40 150.16 12 2 PRO A 19 ? ? -69.74 99.56 13 2 ILE A 43 ? ? -44.63 90.51 14 2 LEU A 56 ? ? -77.11 48.75 15 2 TYR A 57 ? ? -34.12 -37.06 16 2 MET A 80 ? ? -50.96 173.37 17 2 LEU A 83 ? ? -34.51 145.80 18 2 SER A 84 ? ? -164.22 115.55 19 3 MET A 8 ? ? -38.15 -75.38 20 3 SER A 15 ? ? -40.92 157.89 21 3 ILE A 43 ? ? -51.24 89.08 22 3 LEU A 56 ? ? -78.49 49.39 23 3 TYR A 57 ? ? -35.96 -36.46 24 3 LEU A 73 ? ? -62.45 93.47 25 3 SER A 84 ? ? -108.62 44.97 26 4 MET A 8 ? ? -46.10 -75.51 27 4 PRO A 19 ? ? -69.73 90.97 28 4 ILE A 43 ? ? -41.33 96.47 29 4 VAL A 47 ? ? -80.38 -72.42 30 4 TYR A 57 ? ? -38.38 -31.12 31 4 LEU A 83 ? ? -49.74 109.23 32 5 SER A 5 ? ? -41.67 97.60 33 5 MET A 8 ? ? -53.20 -75.39 34 5 PRO A 19 ? ? -69.76 92.38 35 5 ILE A 43 ? ? -52.05 94.10 36 5 LEU A 56 ? ? -75.86 48.74 37 5 TYR A 57 ? ? -35.15 -34.25 38 5 SER A 84 ? ? -88.94 41.68 39 6 MET A 8 ? ? -49.85 -75.38 40 6 SER A 15 ? ? -47.18 174.93 41 6 PRO A 19 ? ? -69.83 99.21 42 6 ASP A 25 ? ? 71.07 43.53 43 6 GLN A 33 ? ? -73.39 -75.28 44 6 ILE A 43 ? ? -49.53 95.40 45 6 TYR A 57 ? ? -38.18 -30.57 46 7 MET A 8 ? ? -58.97 -75.44 47 7 PRO A 19 ? ? -69.80 98.99 48 7 GLN A 33 ? ? -76.30 -73.67 49 7 ILE A 43 ? ? -46.75 91.10 50 7 LEU A 56 ? ? -76.78 47.66 51 7 TYR A 57 ? ? -35.00 -37.82 52 7 GLU A 74 ? ? -57.43 -175.51 53 7 MET A 80 ? ? -102.55 69.17 54 8 SER A 3 ? ? -49.62 168.25 55 8 SER A 5 ? ? -86.44 41.33 56 8 MET A 8 ? ? -56.25 -74.95 57 8 SER A 15 ? ? -48.03 153.44 58 8 TRP A 17 ? ? -41.17 150.12 59 8 PRO A 19 ? ? -69.76 93.79 60 8 ASP A 25 ? ? 70.96 48.15 61 8 ILE A 43 ? ? -50.28 94.49 62 8 LEU A 56 ? ? -81.63 44.41 63 8 TYR A 57 ? ? -33.90 -33.82 64 8 LEU A 73 ? ? -64.03 94.67 65 8 SER A 84 ? ? -116.59 76.53 66 9 SER A 2 ? ? -172.73 140.37 67 9 MET A 8 ? ? -53.53 -74.92 68 9 TRP A 17 ? ? -44.17 157.02 69 9 PRO A 19 ? ? -69.74 96.73 70 9 ASN A 24 ? ? -37.15 153.02 71 9 ILE A 43 ? ? -48.27 89.97 72 9 THR A 50 ? ? -131.06 -31.32 73 9 LEU A 56 ? ? -77.75 49.30 74 9 TYR A 57 ? ? -35.98 -37.35 75 9 GLU A 74 ? ? -63.09 -178.00 76 9 ARG A 82 ? ? -98.62 33.62 77 10 SER A 6 ? ? 39.17 51.21 78 10 MET A 8 ? ? -57.36 -75.45 79 10 PRO A 19 ? ? -69.78 94.48 80 10 ASP A 25 ? ? 70.08 50.42 81 10 GLN A 33 ? ? -75.35 -74.40 82 10 ILE A 43 ? ? -52.92 92.46 83 10 ILE A 44 ? ? -71.25 -70.02 84 10 VAL A 47 ? ? -78.43 -71.08 85 10 LEU A 56 ? ? -79.76 46.59 86 10 TYR A 57 ? ? -35.26 -36.22 87 11 MET A 8 ? ? -36.80 -75.43 88 11 PRO A 19 ? ? -69.72 96.50 89 11 ILE A 43 ? ? -47.42 91.61 90 11 LEU A 56 ? ? -78.43 49.86 91 11 TYR A 57 ? ? -36.84 -35.52 92 11 VAL A 67 ? ? -49.39 -19.33 93 11 LEU A 73 ? ? -67.28 96.69 94 11 ARG A 82 ? ? -34.83 136.93 95 11 LEU A 83 ? ? -36.11 127.72 96 11 SER A 84 ? ? -107.16 41.33 97 12 MET A 8 ? ? -61.61 -71.75 98 12 TRP A 17 ? ? -37.29 130.33 99 12 PRO A 19 ? ? -69.74 91.42 100 12 ILE A 43 ? ? -46.24 96.53 101 12 LEU A 56 ? ? -77.32 47.84 102 12 TYR A 57 ? ? -34.33 -38.90 103 12 THR A 79 ? ? -92.29 52.00 104 13 MET A 8 ? ? -66.91 -72.64 105 13 TRP A 17 ? ? -47.80 168.14 106 13 ILE A 43 ? ? -44.24 91.81 107 13 LEU A 56 ? ? -75.74 48.97 108 13 TYR A 57 ? ? -36.24 -30.39 109 14 MET A 8 ? ? -36.36 -75.34 110 14 LYS A 21 ? ? -60.52 93.30 111 14 ILE A 43 ? ? -52.57 88.33 112 14 LEU A 56 ? ? -78.31 46.75 113 14 TYR A 57 ? ? -33.95 -36.81 114 14 LEU A 73 ? ? -67.50 97.38 115 15 MET A 8 ? ? -61.99 -74.66 116 15 SER A 15 ? ? -68.52 -176.77 117 15 TRP A 17 ? ? -39.93 152.60 118 15 ILE A 43 ? ? -45.50 91.01 119 15 LEU A 56 ? ? -78.61 49.26 120 15 TYR A 57 ? ? -36.14 -34.94 121 16 SER A 6 ? ? -161.68 112.82 122 16 MET A 8 ? ? -49.98 -75.42 123 16 PRO A 19 ? ? -69.72 97.81 124 16 ASP A 25 ? ? 35.93 53.73 125 16 ILE A 43 ? ? -42.56 93.27 126 16 LEU A 56 ? ? -76.94 47.76 127 16 TYR A 57 ? ? -35.72 -35.26 128 17 SER A 5 ? ? -129.92 -56.44 129 17 MET A 8 ? ? -35.52 -75.43 130 17 PRO A 19 ? ? -69.79 96.93 131 17 ILE A 43 ? ? -49.96 89.42 132 17 LEU A 56 ? ? -76.92 47.75 133 17 TYR A 57 ? ? -35.69 -34.68 134 17 LEU A 73 ? ? -62.80 94.39 135 17 LYS A 78 ? ? -62.42 -72.47 136 17 MET A 80 ? ? -114.80 79.09 137 18 SER A 5 ? ? -35.63 132.40 138 18 MET A 8 ? ? -59.55 -75.41 139 18 SER A 15 ? ? -59.65 177.81 140 18 PRO A 19 ? ? -69.76 98.30 141 18 GLN A 33 ? ? -75.19 -75.23 142 18 ILE A 43 ? ? -47.77 91.53 143 18 VAL A 47 ? ? -81.85 -70.15 144 18 LEU A 56 ? ? -76.21 48.64 145 18 TYR A 57 ? ? -37.02 -29.09 146 18 THR A 79 ? ? -84.22 33.14 147 19 MET A 8 ? ? -34.92 -75.42 148 19 TRP A 17 ? ? -46.75 158.98 149 19 ILE A 43 ? ? -45.04 93.76 150 19 VAL A 47 ? ? -90.52 -64.64 151 19 LEU A 56 ? ? -75.72 48.91 152 19 TYR A 57 ? ? -33.89 -34.19 153 19 THR A 79 ? ? -100.12 43.61 154 20 SER A 6 ? ? -71.26 -70.11 155 20 MET A 8 ? ? -35.05 -75.42 156 20 PRO A 19 ? ? -69.78 95.85 157 20 ILE A 43 ? ? -45.50 91.19 158 20 LEU A 56 ? ? -76.04 48.54 159 20 TYR A 57 ? ? -34.61 -36.00 #