HEADER OXIDOREDUCTASE 27-OCT-05 2ET6 TITLE (3R)-HYDROXYACYL-COA DEHYDROGENASE DOMAIN OF CANDIDA TROPICALIS TITLE 2 PEROXISOMAL MULTIFUNCTIONAL ENZYME TYPE 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: (3R)-HYDROXYACYL-COA DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PEROXISOMAL HYDRATASE-DEHYDROGENASE-EPIMERASE, HDE, COMPND 5 MULTIFUNCTIONAL BETA-OXIDATION PROTEIN, MFP; COMPND 6 EC: 1.1.1.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA TROPICALIS; SOURCE 3 ORGANISM_TAXID: 5482; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 CODON PLUS(DE3)-RIL; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS DEHYDROGENASE, MFE-2, BETA-OXIDATION, PEROXISOME, SDR, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.S.YLIANTTILA,J.K.HILTUNEN,T.GLUMOFF REVDAT 6 03-APR-24 2ET6 1 REMARK REVDAT 5 14-FEB-24 2ET6 1 REMARK REVDAT 4 20-OCT-21 2ET6 1 SEQADV REVDAT 3 13-JUL-11 2ET6 1 VERSN REVDAT 2 24-FEB-09 2ET6 1 VERSN REVDAT 1 23-MAY-06 2ET6 0 JRNL AUTH M.S.YLIANTTILA,N.V.PURSIAINEN,A.M.HAAPALAINEN,A.H.JUFFER, JRNL AUTH 2 Y.POIRIER,J.K.HILTUNEN,T.GLUMOFF JRNL TITL CRYSTAL STRUCTURE OF YEAST PEROXISOMAL MULTIFUNCTIONAL JRNL TITL 2 ENZYME: STRUCTURAL BASIS FOR SUBSTRATE SPECIFICITY OF JRNL TITL 3 (3R)-HYDROXYACYL-COA DEHYDROGENASE UNITS. JRNL REF J.MOL.BIOL. V. 358 1286 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16574148 JRNL DOI 10.1016/J.JMB.2006.03.001 REMARK 2 REMARK 2 RESOLUTION. 2.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 26573 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1355 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.22 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.34 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3667 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.2520 REMARK 3 BIN FREE R VALUE SET COUNT : 200 REMARK 3 BIN FREE R VALUE : 0.2990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4465 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 345 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.52000 REMARK 3 B22 (A**2) : -1.34000 REMARK 3 B33 (A**2) : 5.86000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.359 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.243 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.201 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.344 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.931 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.876 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4554 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4111 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6167 ; 1.296 ; 1.947 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9596 ; 0.789 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 579 ; 6.871 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 692 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5094 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 889 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1045 ; 0.196 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4938 ; 0.226 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 2705 ; 0.082 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 292 ; 0.156 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 15 ; 0.192 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 30 ; 0.136 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.240 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2877 ; 1.490 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4611 ; 2.099 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1677 ; 1.374 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1556 ; 1.902 ; 4.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 313 REMARK 3 ORIGIN FOR THE GROUP (A): 39.1720 38.3060 16.4350 REMARK 3 T TENSOR REMARK 3 T11: 0.4755 T22: 0.3843 REMARK 3 T33: 0.0260 T12: 0.0132 REMARK 3 T13: 0.0059 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 1.5030 L22: 0.2167 REMARK 3 L33: 0.3584 L12: 0.2059 REMARK 3 L13: -0.3307 L23: -0.0119 REMARK 3 S TENSOR REMARK 3 S11: 0.0311 S12: 0.0210 S13: 0.0281 REMARK 3 S21: 0.0301 S22: -0.0051 S23: -0.0417 REMARK 3 S31: -0.0006 S32: 0.0200 S33: -0.0259 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 314 A 592 REMARK 3 ORIGIN FOR THE GROUP (A): 18.6940 39.8420 19.2650 REMARK 3 T TENSOR REMARK 3 T11: 0.4762 T22: 0.3814 REMARK 3 T33: 0.0186 T12: 0.0068 REMARK 3 T13: 0.0116 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 1.8262 L22: 0.5591 REMARK 3 L33: 0.4201 L12: 0.1506 REMARK 3 L13: -0.0728 L23: 0.0363 REMARK 3 S TENSOR REMARK 3 S11: 0.0256 S12: 0.0451 S13: 0.0689 REMARK 3 S21: 0.0001 S22: -0.0071 S23: 0.0258 REMARK 3 S31: 0.0037 S32: -0.0570 S33: -0.0185 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2ET6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-NOV-05. REMARK 100 THE DEPOSITION ID IS D_1000035061. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JAN-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : ENRAF-NONIUS FR591 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27948 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.220 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.22 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.740 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY IGZ6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 4000, 0.1 M SODIUM ACETATE PH REMARK 280 4.2, 0.2 M AMMONIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.44750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.72250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.17000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.72250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.44750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.17000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMMETRIC UNIT CONTAINS ONLY ONE BIOLOGICAL UNIT THAT REMARK 300 IS ONE MONOMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 41 REMARK 465 GLY A 42 REMARK 465 ALA A 43 REMARK 465 LEU A 44 REMARK 465 ASN A 45 REMARK 465 GLY A 46 REMARK 465 GLN A 47 REMARK 465 GLY A 48 REMARK 465 GLY A 49 REMARK 465 ASN A 50 REMARK 465 SER A 51 REMARK 465 THR A 504 REMARK 465 LEU A 505 REMARK 465 SER A 506 REMARK 465 ILE A 507 REMARK 465 MET A 508 REMARK 465 ARG A 509 REMARK 465 GLU A 510 REMARK 465 GLN A 511 REMARK 465 ASP A 512 REMARK 465 ASP A 604 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 789 O HOH A 867 3655 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 277 CE2 TYR A 277 CD2 0.096 REMARK 500 TYR A 297 CZ TYR A 297 CE2 0.084 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 5 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP A 79 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP A 353 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 408 CB - CG - OD2 ANGL. DEV. = 7.9 DEGREES REMARK 500 ASP A 420 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 531 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 64 33.16 -97.65 REMARK 500 ASP A 77 49.40 -84.47 REMARK 500 THR A 91 -173.90 -172.35 REMARK 500 ILE A 101 139.14 170.87 REMARK 500 SER A 149 -157.61 -90.38 REMARK 500 ALA A 239 114.67 -174.90 REMARK 500 PHE A 262 76.83 -64.45 REMARK 500 ASN A 288 137.67 -36.40 REMARK 500 THR A 453 -157.54 -98.43 REMARK 500 THR A 501 -78.67 -115.34 REMARK 500 ALA A 502 16.42 -163.48 REMARK 500 TYR A 516 66.26 -119.38 REMARK 500 REMARK 500 REMARK: NULL DBREF 2ET6 A 1 604 UNP P22414 FOX2_CANTR 1 604 SEQADV 2ET6 MET A 204 UNP P22414 LEU 204 CONFLICT SEQADV 2ET6 SER A 506 UNP P22414 THR 506 ENGINEERED MUTATION SEQADV 2ET6 MET A 508 UNP P22414 PHE 508 ENGINEERED MUTATION SEQRES 1 A 604 MET SER PRO VAL ASP PHE LYS ASP LYS VAL VAL ILE ILE SEQRES 2 A 604 THR GLY ALA GLY GLY GLY LEU GLY LYS TYR TYR SER LEU SEQRES 3 A 604 GLU PHE ALA LYS LEU GLY ALA LYS VAL VAL VAL ASN ASP SEQRES 4 A 604 LEU GLY GLY ALA LEU ASN GLY GLN GLY GLY ASN SER LYS SEQRES 5 A 604 ALA ALA ASP VAL VAL VAL ASP GLU ILE VAL LYS ASN GLY SEQRES 6 A 604 GLY VAL ALA VAL ALA ASP TYR ASN ASN VAL LEU ASP GLY SEQRES 7 A 604 ASP LYS ILE VAL GLU THR ALA VAL LYS ASN PHE GLY THR SEQRES 8 A 604 VAL HIS VAL ILE ILE ASN ASN ALA GLY ILE LEU ARG ASP SEQRES 9 A 604 ALA SER MET LYS LYS MET THR GLU LYS ASP TYR LYS LEU SEQRES 10 A 604 VAL ILE ASP VAL HIS LEU ASN GLY ALA PHE ALA VAL THR SEQRES 11 A 604 LYS ALA ALA TRP PRO TYR PHE GLN LYS GLN LYS TYR GLY SEQRES 12 A 604 ARG ILE VAL ASN THR SER SER PRO ALA GLY LEU TYR GLY SEQRES 13 A 604 ASN PHE GLY GLN ALA ASN TYR ALA SER ALA LYS SER ALA SEQRES 14 A 604 LEU LEU GLY PHE ALA GLU THR LEU ALA LYS GLU GLY ALA SEQRES 15 A 604 LYS TYR ASN ILE LYS ALA ASN ALA ILE ALA PRO LEU ALA SEQRES 16 A 604 ARG SER ARG MET THR GLU SER ILE MET PRO PRO PRO MET SEQRES 17 A 604 LEU GLU LYS LEU GLY PRO GLU LYS VAL ALA PRO LEU VAL SEQRES 18 A 604 LEU TYR LEU SER SER ALA GLU ASN GLU LEU THR GLY GLN SEQRES 19 A 604 PHE PHE GLU VAL ALA ALA GLY PHE TYR ALA GLN ILE ARG SEQRES 20 A 604 TRP GLU ARG SER GLY GLY VAL LEU PHE LYS PRO ASP GLN SEQRES 21 A 604 SER PHE THR ALA GLU VAL VAL ALA LYS ARG PHE SER GLU SEQRES 22 A 604 ILE LEU ASP TYR ASP ASP SER ARG LYS PRO GLU TYR LEU SEQRES 23 A 604 LYS ASN GLN TYR PRO PHE MET LEU ASN ASP TYR ALA THR SEQRES 24 A 604 LEU THR ASN GLU ALA ARG LYS LEU PRO ALA ASN ASP ALA SEQRES 25 A 604 SER GLY ALA PRO THR VAL SER LEU LYS ASP LYS VAL VAL SEQRES 26 A 604 LEU ILE THR GLY ALA GLY ALA GLY LEU GLY LYS GLU TYR SEQRES 27 A 604 ALA LYS TRP PHE ALA LYS TYR GLY ALA LYS VAL VAL VAL SEQRES 28 A 604 ASN ASP PHE LYS ASP ALA THR LYS THR VAL ASP GLU ILE SEQRES 29 A 604 LYS ALA ALA GLY GLY GLU ALA TRP PRO ASP GLN HIS ASP SEQRES 30 A 604 VAL ALA LYS ASP SER GLU ALA ILE ILE LYS ASN VAL ILE SEQRES 31 A 604 ASP LYS TYR GLY THR ILE ASP ILE LEU VAL ASN ASN ALA SEQRES 32 A 604 GLY ILE LEU ARG ASP ARG SER PHE ALA LYS MET SER LYS SEQRES 33 A 604 GLN GLU TRP ASP SER VAL GLN GLN VAL HIS LEU ILE GLY SEQRES 34 A 604 THR PHE ASN LEU SER ARG LEU ALA TRP PRO TYR PHE VAL SEQRES 35 A 604 GLU LYS GLN PHE GLY ARG ILE ILE ASN ILE THR SER THR SEQRES 36 A 604 SER GLY ILE TYR GLY ASN PHE GLY GLN ALA ASN TYR SER SEQRES 37 A 604 SER SER LYS ALA GLY ILE LEU GLY LEU SER LYS THR MET SEQRES 38 A 604 ALA ILE GLU GLY ALA LYS ASN ASN ILE LYS VAL ASN ILE SEQRES 39 A 604 VAL ALA PRO HIS ALA GLU THR ALA MET THR LEU SER ILE SEQRES 40 A 604 MET ARG GLU GLN ASP LYS ASN LEU TYR HIS ALA ASP GLN SEQRES 41 A 604 VAL ALA PRO LEU LEU VAL TYR LEU GLY THR ASP ASP VAL SEQRES 42 A 604 PRO VAL THR GLY GLU THR PHE GLU ILE GLY GLY GLY TRP SEQRES 43 A 604 ILE GLY ASN THR ARG TRP GLN ARG ALA LYS GLY ALA VAL SEQRES 44 A 604 SER HIS ASP GLU HIS THR THR VAL GLU PHE ILE LYS GLU SEQRES 45 A 604 HIS LEU ASN GLU ILE THR ASP PHE THR THR ASP THR GLU SEQRES 46 A 604 ASN PRO LYS SER THR THR GLU SER SER MET ALA ILE LEU SEQRES 47 A 604 SER ALA VAL GLY GLY ASP FORMUL 2 HOH *345(H2 O) HELIX 1 1 GLY A 18 LEU A 31 1 14 HELIX 2 2 LYS A 52 ASN A 64 1 13 HELIX 3 3 ASP A 77 GLY A 90 1 14 HELIX 4 4 THR A 111 LEU A 123 1 13 HELIX 5 5 LEU A 123 LYS A 141 1 19 HELIX 6 6 SER A 150 GLY A 156 1 7 HELIX 7 7 GLN A 160 ALA A 182 1 23 HELIX 8 8 SER A 197 SER A 202 1 6 HELIX 9 9 PRO A 205 GLU A 210 1 6 HELIX 10 10 GLY A 213 SER A 225 1 13 HELIX 11 11 THR A 263 LEU A 275 1 13 HELIX 12 12 PRO A 283 LYS A 287 5 5 HELIX 13 13 ASP A 296 ARG A 305 1 10 HELIX 14 14 ALA A 332 TYR A 345 1 14 HELIX 15 15 ALA A 357 ALA A 367 1 11 HELIX 16 16 ASP A 377 GLY A 394 1 18 HELIX 17 17 SER A 415 LEU A 427 1 13 HELIX 18 18 LEU A 427 LYS A 444 1 18 HELIX 19 19 SER A 454 TYR A 459 1 6 HELIX 20 20 GLN A 464 ALA A 486 1 23 HELIX 21 21 HIS A 517 GLN A 520 5 4 HELIX 22 22 VAL A 521 LEU A 528 1 8 HELIX 23 23 THR A 566 THR A 578 1 13 HELIX 24 24 SER A 589 GLY A 603 1 15 SHEET 1 A16 VAL A 67 ASP A 71 0 SHEET 2 A16 LYS A 34 ASN A 38 1 N VAL A 37 O VAL A 69 SHEET 3 A16 VAL A 10 ILE A 13 1 N VAL A 11 O LYS A 34 SHEET 4 A16 VAL A 94 ASN A 97 1 O ILE A 96 N ILE A 12 SHEET 5 A16 GLY A 143 THR A 148 1 O VAL A 146 N ASN A 97 SHEET 6 A16 ILE A 186 PRO A 193 1 O ASN A 189 N ASN A 147 SHEET 7 A16 PHE A 235 ALA A 239 1 O PHE A 236 N ALA A 192 SHEET 8 A16 PHE A 242 ARG A 250 -1 O ALA A 244 N GLU A 237 SHEET 9 A16 TRP A 546 ARG A 554 -1 O GLN A 553 N ARG A 247 SHEET 10 A16 THR A 539 GLY A 543 -1 N GLU A 541 O GLY A 548 SHEET 11 A16 ILE A 490 PRO A 497 1 N ALA A 496 O PHE A 540 SHEET 12 A16 GLY A 447 ILE A 452 1 N ILE A 449 O LYS A 491 SHEET 13 A16 ILE A 398 ASN A 401 1 N LEU A 399 O ILE A 450 SHEET 14 A16 VAL A 324 ILE A 327 1 N LEU A 326 O ILE A 398 SHEET 15 A16 LYS A 348 ASN A 352 1 O VAL A 350 N VAL A 325 SHEET 16 A16 GLU A 370 ASP A 374 1 O TRP A 372 N VAL A 351 SHEET 1 B 4 VAL A 254 LEU A 255 0 SHEET 2 B 4 TRP A 546 ARG A 554 -1 O ILE A 547 N VAL A 254 SHEET 3 B 4 PHE A 242 ARG A 250 -1 N ARG A 247 O GLN A 553 SHEET 4 B 4 ALA A 558 VAL A 559 -1 O ALA A 558 N TYR A 243 CRYST1 74.895 78.340 95.445 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013352 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012765 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010477 0.00000