HEADER OXIDOREDUCTASE 31-OCT-05 2EV9 TITLE CRYSTAL STRUCTURE OF SHIKIMATE 5-DEHYDROGENASE (AROE) FROM THERMUS TITLE 2 THERMOPHILUS HB8 IN COMPLEX WITH NADP(H) AND SHIKIMATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SHIKIMATE 5-DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: AROE; COMPND 5 EC: 1.1.1.25; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 GENE: AROE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET 11A KEYWDS SUBSTRATE, SHIKIMATE, COFACTOR, DIMER, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, KEYWDS 3 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR B.BAGAUTDINOV,N.KUNISHIMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 5 25-OCT-23 2EV9 1 REMARK REVDAT 4 13-JUL-11 2EV9 1 VERSN REVDAT 3 24-FEB-09 2EV9 1 VERSN REVDAT 2 13-NOV-07 2EV9 1 JRNL REVDAT 1 01-MAY-06 2EV9 0 JRNL AUTH B.BAGAUTDINOV,N.KUNISHIMA JRNL TITL CRYSTAL STRUCTURES OF SHIKIMATE DEHYDROGENASE AROE FROM JRNL TITL 2 THERMUS THERMOPHILUS HB8 AND ITS COFACTOR AND SUBSTRATE JRNL TITL 3 COMPLEXES: INSIGHTS INTO THE ENZYMATIC MECHANISM JRNL REF J.MOL.BIOL. V. 373 424 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17825835 JRNL DOI 10.1016/J.JMB.2007.08.017 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.07 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 38064 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1879 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 2 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.97 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3350 REMARK 3 BIN FREE R VALUE : 0.3950 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 183 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.029 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3990 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 82 REMARK 3 SOLVENT ATOMS : 418 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.94 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.01000 REMARK 3 B22 (A**2) : 7.13000 REMARK 3 B33 (A**2) : -0.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.25 REMARK 3 ESD FROM SIGMAA (A) : 0.28 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.33 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.970 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : OVERALL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EV9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-NOV-05. REMARK 100 THE DEPOSITION ID IS D_1000035133. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUL-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38064 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : 0.04200 REMARK 200 FOR THE DATA SET : 16.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.46800 REMARK 200 R SYM FOR SHELL (I) : 0.39000 REMARK 200 FOR SHELL : 2.150 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CNS 1.1 REMARK 200 STARTING MODEL: PDB ENTRY 2CY0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, SODIUM ACETATE REMARK 280 TRIHYDRATE, PEG4000, PH 4.6, MICROBATCH, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.97400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.53150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.77900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.53150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.97400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.77900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 262 REMARK 465 VAL A 263 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 161 -166.90 -105.80 REMARK 500 PRO B 62 51.53 -110.75 REMARK 500 LEU B 161 -166.18 -102.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SKM A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SKM B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 1411 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1WXD RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN APO FORM REMARK 900 RELATED ID: 2CY0 RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMPLEX WITH NADP REMARK 900 RELATED ID: 2D5C RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMPLEX WITH SHIKIMATE REMARK 900 RELATED ID: TTK003000004.3 RELATED DB: TARGETDB DBREF 2EV9 A 1 263 UNP Q5SJF8 Q5SJF8_THET8 1 263 DBREF 2EV9 B 1 263 UNP Q5SJF8 Q5SJF8_THET8 1 263 SEQRES 1 A 263 MET LEU ARG PHE ALA VAL LEU GLY HIS PRO VAL ALA HIS SEQRES 2 A 263 SER LEU SER PRO ALA MET HIS ALA PHE ALA LEU GLU SER SEQRES 3 A 263 LEU GLY LEU GLU GLY SER TYR GLU ALA TRP ASP THR PRO SEQRES 4 A 263 LEU GLU ALA LEU PRO GLY ARG LEU LYS GLU VAL ARG ARG SEQRES 5 A 263 ALA PHE ARG GLY VAL ASN LEU THR LEU PRO LEU LYS GLU SEQRES 6 A 263 ALA ALA LEU ALA HIS LEU ASP TRP VAL SER PRO GLU ALA SEQRES 7 A 263 GLN ARG ILE GLY ALA VAL ASN THR VAL LEU GLN VAL GLU SEQRES 8 A 263 GLY ARG LEU PHE GLY PHE ASN THR ASP ALA PRO GLY PHE SEQRES 9 A 263 LEU GLU ALA LEU LYS ALA GLY GLY ILE PRO LEU LYS GLY SEQRES 10 A 263 PRO ALA LEU VAL LEU GLY ALA GLY GLY ALA GLY ARG ALA SEQRES 11 A 263 VAL ALA PHE ALA LEU ARG GLU ALA GLY LEU GLU VAL TRP SEQRES 12 A 263 VAL TRP ASN ARG THR PRO GLN ARG ALA LEU ALA LEU ALA SEQRES 13 A 263 GLU GLU PHE GLY LEU ARG ALA VAL PRO LEU GLU LYS ALA SEQRES 14 A 263 ARG GLU ALA ARG LEU LEU VAL ASN ALA THR ARG VAL GLY SEQRES 15 A 263 LEU GLU ASP PRO SER ALA SER PRO LEU PRO ALA GLU LEU SEQRES 16 A 263 PHE PRO GLU GLU GLY ALA ALA VAL ASP LEU VAL TYR ARG SEQRES 17 A 263 PRO LEU TRP THR ARG PHE LEU ARG GLU ALA LYS ALA LYS SEQRES 18 A 263 GLY LEU LYS VAL GLN THR GLY LEU PRO MET LEU ALA TRP SEQRES 19 A 263 GLN GLY ALA LEU ALA PHE ARG LEU TRP THR GLY LEU LEU SEQRES 20 A 263 PRO ASP PRO SER GLY MET GLU GLU ALA ALA ARG ARG ALA SEQRES 21 A 263 LEU GLY VAL SEQRES 1 B 263 MET LEU ARG PHE ALA VAL LEU GLY HIS PRO VAL ALA HIS SEQRES 2 B 263 SER LEU SER PRO ALA MET HIS ALA PHE ALA LEU GLU SER SEQRES 3 B 263 LEU GLY LEU GLU GLY SER TYR GLU ALA TRP ASP THR PRO SEQRES 4 B 263 LEU GLU ALA LEU PRO GLY ARG LEU LYS GLU VAL ARG ARG SEQRES 5 B 263 ALA PHE ARG GLY VAL ASN LEU THR LEU PRO LEU LYS GLU SEQRES 6 B 263 ALA ALA LEU ALA HIS LEU ASP TRP VAL SER PRO GLU ALA SEQRES 7 B 263 GLN ARG ILE GLY ALA VAL ASN THR VAL LEU GLN VAL GLU SEQRES 8 B 263 GLY ARG LEU PHE GLY PHE ASN THR ASP ALA PRO GLY PHE SEQRES 9 B 263 LEU GLU ALA LEU LYS ALA GLY GLY ILE PRO LEU LYS GLY SEQRES 10 B 263 PRO ALA LEU VAL LEU GLY ALA GLY GLY ALA GLY ARG ALA SEQRES 11 B 263 VAL ALA PHE ALA LEU ARG GLU ALA GLY LEU GLU VAL TRP SEQRES 12 B 263 VAL TRP ASN ARG THR PRO GLN ARG ALA LEU ALA LEU ALA SEQRES 13 B 263 GLU GLU PHE GLY LEU ARG ALA VAL PRO LEU GLU LYS ALA SEQRES 14 B 263 ARG GLU ALA ARG LEU LEU VAL ASN ALA THR ARG VAL GLY SEQRES 15 B 263 LEU GLU ASP PRO SER ALA SER PRO LEU PRO ALA GLU LEU SEQRES 16 B 263 PHE PRO GLU GLU GLY ALA ALA VAL ASP LEU VAL TYR ARG SEQRES 17 B 263 PRO LEU TRP THR ARG PHE LEU ARG GLU ALA LYS ALA LYS SEQRES 18 B 263 GLY LEU LYS VAL GLN THR GLY LEU PRO MET LEU ALA TRP SEQRES 19 B 263 GLN GLY ALA LEU ALA PHE ARG LEU TRP THR GLY LEU LEU SEQRES 20 B 263 PRO ASP PRO SER GLY MET GLU GLU ALA ALA ARG ARG ALA SEQRES 21 B 263 LEU GLY VAL HET SO4 A1402 5 HET SKM A 301 12 HET NAP A1411 48 HET SO4 B1401 5 HET SKM B 302 12 HETNAM SO4 SULFATE ION HETNAM SKM (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC HETNAM 2 SKM ACID HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN SKM SHIKIMATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 SKM 2(C7 H10 O5) FORMUL 5 NAP C21 H28 N7 O17 P3 FORMUL 8 HOH *418(H2 O) HELIX 1 1 LEU A 15 LEU A 27 1 13 HELIX 2 2 PRO A 39 GLU A 41 5 3 HELIX 3 3 ALA A 42 PHE A 54 1 13 HELIX 4 4 GLU A 65 LEU A 71 5 7 HELIX 5 5 SER A 75 GLY A 82 1 8 HELIX 6 6 THR A 99 GLY A 111 1 13 HELIX 7 7 GLY A 125 ALA A 138 1 14 HELIX 8 8 THR A 148 GLY A 160 1 13 HELIX 9 9 PRO A 165 ALA A 172 5 8 HELIX 10 10 PRO A 192 PHE A 196 5 5 HELIX 11 11 THR A 212 LYS A 221 1 10 HELIX 12 12 GLY A 228 GLY A 245 1 18 HELIX 13 13 ASP A 249 LEU A 261 1 13 HELIX 14 14 LEU B 15 LEU B 27 1 13 HELIX 15 15 PRO B 39 GLU B 41 5 3 HELIX 16 16 ALA B 42 PHE B 54 1 13 HELIX 17 17 ALA B 67 LEU B 71 5 5 HELIX 18 18 SER B 75 GLY B 82 1 8 HELIX 19 19 THR B 99 GLY B 111 1 13 HELIX 20 20 GLY B 125 ALA B 138 1 14 HELIX 21 21 THR B 148 GLY B 160 1 13 HELIX 22 22 PRO B 165 ALA B 172 5 8 HELIX 23 23 PRO B 192 PHE B 196 5 5 HELIX 24 24 THR B 212 LYS B 221 1 10 HELIX 25 25 GLY B 228 GLY B 245 1 18 HELIX 26 26 ASP B 249 GLY B 262 1 14 SHEET 1 A 6 GLY A 31 ASP A 37 0 SHEET 2 A 6 LEU A 2 GLY A 8 1 N LEU A 2 O SER A 32 SHEET 3 A 6 GLY A 56 LEU A 59 1 O ASN A 58 N LEU A 7 SHEET 4 A 6 THR A 86 VAL A 90 -1 O VAL A 87 N VAL A 57 SHEET 5 A 6 ARG A 93 PHE A 97 -1 O ARG A 93 N VAL A 90 SHEET 6 A 6 TRP A 73 VAL A 74 1 N TRP A 73 O GLY A 96 SHEET 1 B 6 ARG A 162 ALA A 163 0 SHEET 2 B 6 VAL A 142 TRP A 145 1 N VAL A 144 O ARG A 162 SHEET 3 B 6 ALA A 119 LEU A 122 1 N ALA A 119 O TRP A 143 SHEET 4 B 6 LEU A 174 ASN A 177 1 O LEU A 174 N LEU A 120 SHEET 5 B 6 ALA A 201 ASP A 204 1 O VAL A 203 N LEU A 175 SHEET 6 B 6 LYS A 224 GLN A 226 1 O LYS A 224 N ALA A 202 SHEET 1 C 6 GLY B 31 ASP B 37 0 SHEET 2 C 6 LEU B 2 GLY B 8 1 N PHE B 4 O SER B 32 SHEET 3 C 6 GLY B 56 LEU B 59 1 O ASN B 58 N ALA B 5 SHEET 4 C 6 THR B 86 VAL B 90 -1 O VAL B 87 N VAL B 57 SHEET 5 C 6 ARG B 93 PHE B 97 -1 O PHE B 97 N THR B 86 SHEET 6 C 6 TRP B 73 VAL B 74 1 N TRP B 73 O GLY B 96 SHEET 1 D 6 ARG B 162 ALA B 163 0 SHEET 2 D 6 VAL B 142 TRP B 145 1 N VAL B 144 O ARG B 162 SHEET 3 D 6 ALA B 119 LEU B 122 1 N ALA B 119 O TRP B 143 SHEET 4 D 6 LEU B 174 ASN B 177 1 O LEU B 174 N LEU B 120 SHEET 5 D 6 ALA B 201 ASP B 204 1 O VAL B 203 N LEU B 175 SHEET 6 D 6 LYS B 224 GLN B 226 1 O LYS B 224 N ALA B 202 CISPEP 1 HIS A 9 PRO A 10 0 0.20 CISPEP 2 LEU A 61 PRO A 62 0 0.02 CISPEP 3 GLY A 117 PRO A 118 0 -0.02 CISPEP 4 ARG A 208 PRO A 209 0 -0.15 CISPEP 5 HIS B 9 PRO B 10 0 -0.04 CISPEP 6 LEU B 61 PRO B 62 0 -0.06 CISPEP 7 GLY B 117 PRO B 118 0 0.12 CISPEP 8 ARG B 208 PRO B 209 0 -0.16 SITE 1 AC1 7 PRO A 192 ARG A 213 HOH A1478 HOH A1489 SITE 2 AC1 7 HOH A1490 HOH A1491 HOH A1648 SITE 1 AC2 5 GLY B 125 GLY B 126 ARG B 151 ARG B 180 SITE 2 AC2 5 HOH B1476 SITE 1 AC3 11 VAL A 6 SER A 14 SER A 16 ASN A 58 SITE 2 AC3 11 THR A 60 LYS A 64 ASN A 85 ASP A 100 SITE 3 AC3 11 TYR A 207 GLN A 235 HOH A1508 SITE 1 AC4 10 VAL B 6 SER B 14 SER B 16 ASN B 58 SITE 2 AC4 10 THR B 60 LYS B 64 ASN B 85 ASP B 100 SITE 3 AC4 10 GLN B 235 HOH B1415 SITE 1 AC5 23 LEU A 61 GLY A 123 ALA A 124 GLY A 125 SITE 2 AC5 23 GLY A 126 ALA A 127 ASN A 146 ARG A 147 SITE 3 AC5 23 THR A 148 ARG A 151 ALA A 178 THR A 179 SITE 4 AC5 23 ARG A 180 VAL A 181 LEU A 205 GLY A 228 SITE 5 AC5 23 LEU A 232 HOH A1454 HOH A1456 HOH A1466 SITE 6 AC5 23 HOH A1580 HOH A1612 HOH A1651 CRYST1 61.948 71.558 113.063 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016143 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013975 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008845 0.00000