HEADER OXIDOREDUCTASE 02-NOV-05 2EWD OBSLTE 17-DEC-14 2EWD 4ND2 TITLE CRYSTAL STRUCTURE OF THE LACTATE DEHYDROGENASE FROM CRYPTOSPORIDIUM TITLE 2 PARVUM COMPLEXED WITH SUBSTRATE (PYRUVIC ACID) AND COFACTOR ANALOG TITLE 3 (3-ACETYLPYRIDINE ADENINE DINUCLEOTIDE). COMPND MOL_ID: 1; COMPND 2 MOLECULE: LACTATE DEHYDROGENASE,; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.27; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRYPTOSPORIDIUM PARVUM; SOURCE 3 ORGANISM_TAXID: 5807; SOURCE 4 GENE: LDH1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS PROTEIN-SUBSTRATE_COFACTOR ANALOG COMPLEX, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR O.A.SENKOVICH,D.CHATTOPADHYAY REVDAT 4 17-DEC-14 2EWD 1 OBSLTE REVDAT 3 13-JUL-11 2EWD 1 VERSN REVDAT 2 24-FEB-09 2EWD 1 VERSN REVDAT 1 12-DEC-06 2EWD 0 JRNL AUTH O.A.SENKOVICH,D.CHATTOPADHYAY JRNL TITL STRUCTURE OF CRYPTOSPORIDIUM PARVUM LACTATE DEHYDROGENASE IN JRNL TITL 2 COMPLEX WITH SUBSTRATES AND COFACTORS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 67287 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 6816 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.09 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2150 REMARK 3 BIN FREE R VALUE : 0.2510 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 846 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.009 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4708 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 118 REMARK 3 SOLVENT ATOMS : 236 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.84200 REMARK 3 B22 (A**2) : -4.84200 REMARK 3 B33 (A**2) : 9.68300 REMARK 3 B12 (A**2) : -2.84200 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM SIGMAA (A) : 0.13 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.16 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 49.95 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR:PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : APA_GOL_PYR_PAR1.TXT REMARK 3 PARAMETER FILE 3 : CNS_TOPPAR:ION.PARAM REMARK 3 PARAMETER FILE 4 : CNS_TOPPAR:WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EWD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-DEC-05. REMARK 100 THE RCSB ID CODE IS RCSB035173. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9998 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67287 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 10.700 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 8.70 REMARK 200 R MERGE FOR SHELL (I) : 0.18600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY: 1T2D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.45 M AMMONIUM SULFATE, 0.1 M SODIUM REMARK 280 CACODYLATE, PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 123.76000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 61.88000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 61.88000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 123.76000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 22650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -95.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 185.64000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 233 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG B 21 CB - CG - CD ANGL. DEV. = 19.6 DEGREES REMARK 500 ARG B 21 CG - CD - NE ANGL. DEV. = -15.6 DEGREES REMARK 500 ARG B 21 CD - NE - CZ ANGL. DEV. = 8.5 DEGREES REMARK 500 ARG B 21 NE - CZ - NH1 ANGL. DEV. = 7.5 DEGREES REMARK 500 ARG B 21 NE - CZ - NH2 ANGL. DEV. = -6.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 131 63.58 -150.02 REMARK 500 ALA A 164 -56.11 -158.76 REMARK 500 LYS A 243A -45.57 70.74 REMARK 500 TYR A 247 -17.76 -149.72 REMARK 500 CYS B 131 64.30 -150.43 REMARK 500 ALA B 164 -59.99 -163.03 REMARK 500 LYS B 243A -14.98 63.14 REMARK 500 TYR B 247 -16.71 -149.88 REMARK 500 ASN B 277 35.50 -146.24 REMARK 500 ALA B 332 -105.23 -58.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 38 0.12 SIDE CHAIN REMARK 500 TYR B 38 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 LEU B 113 24.7 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE A3D A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE A3D B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR B 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 602 REMARK 999 REMARK 999 SEQUENCE REMARK 999 ACCORDING TO AUTHORS IT IS NOT KNOWN IF THESE ARE PCR REMARK 999 ERRORS OR MUTATIONS CORRESPONDING DNA POLYMORPHISM REMARK 999 OR IF THEY ARE DUE TO ERRORS IN PROTEIN DATABASE. DBREF 2EWD A 17 333 GB 66362544 XP_628238 17 333 DBREF 2EWD B 17 333 GB 66362544 XP_628238 17 333 SEQADV 2EWD ASP A 65 GB 66362544 ASN 81 SEE REMARK 999 SEQADV 2EWD ALA A 184 GB 66362544 VAL 200 SEE REMARK 999 SEQADV 2EWD ASP B 65 GB 66362544 ASN 81 SEE REMARK 999 SEQADV 2EWD ALA B 184 GB 66362544 VAL 200 SEE REMARK 999 SEQRES 1 A 317 MET ILE GLU ARG ARG LYS ILE ALA VAL ILE GLY SER GLY SEQRES 2 A 317 GLN ILE GLY GLY ASN ILE ALA TYR ILE VAL GLY LYS ASP SEQRES 3 A 317 ASN LEU ALA ASP VAL VAL LEU PHE ASP ILE ALA GLU GLY SEQRES 4 A 317 ILE PRO GLN GLY LYS ALA LEU ASP ILE THR HIS SER MET SEQRES 5 A 317 VAL MET PHE GLY SER THR SER LYS VAL ILE GLY THR ASP SEQRES 6 A 317 ASP TYR ALA ASP ILE SER GLY SER ASP VAL VAL ILE ILE SEQRES 7 A 317 THR ALA SER ILE PRO GLY ARG PRO LYS ASP ASP ARG SER SEQRES 8 A 317 GLU LEU LEU PHE GLY ASN ALA ARG ILE LEU ASP SER VAL SEQRES 9 A 317 ALA GLU GLY VAL LYS LYS TYR CYS PRO ASN ALA PHE VAL SEQRES 10 A 317 ILE CYS ILE THR ASN PRO LEU ASP VAL MET VAL SER HIS SEQRES 11 A 317 PHE GLN LYS VAL SER GLY LEU PRO HIS ASN LYS VAL CYS SEQRES 12 A 317 GLY MET ALA GLY VAL LEU ASP SER SER ARG PHE ARG THR SEQRES 13 A 317 PHE ILE ALA GLN HIS PHE GLY VAL ASN ALA SER ASP VAL SEQRES 14 A 317 SER ALA ASN VAL ILE GLY GLY HIS GLY ASP GLY MET VAL SEQRES 15 A 317 PRO ALA THR SER SER VAL SER VAL GLY GLY VAL PRO LEU SEQRES 16 A 317 SER SER PHE ILE LYS GLN GLY LEU ILE THR GLN GLU GLN SEQRES 17 A 317 ILE ASP GLU ILE VAL CYS HIS THR ARG ILE ALA TRP LYS SEQRES 18 A 317 GLU VAL ALA ASP ASN LEU LYS THR GLY THR ALA TYR PHE SEQRES 19 A 317 ALA PRO ALA ALA ALA ALA VAL LYS MET ALA GLU ALA TYR SEQRES 20 A 317 LEU LYS ASP LYS LYS ALA VAL VAL PRO CYS SER ALA PHE SEQRES 21 A 317 CYS SER ASN HIS TYR GLY VAL LYS GLY ILE TYR MET GLY SEQRES 22 A 317 VAL PRO THR ILE ILE GLY LYS ASN GLY VAL GLU ASP ILE SEQRES 23 A 317 LEU GLU LEU ASP LEU THR PRO LEU GLU GLN LYS LEU LEU SEQRES 24 A 317 GLY GLU SER ILE ASN GLU VAL ASN THR ILE SER LYS VAL SEQRES 25 A 317 LEU ASP ASN ALA PRO SEQRES 1 B 317 MET ILE GLU ARG ARG LYS ILE ALA VAL ILE GLY SER GLY SEQRES 2 B 317 GLN ILE GLY GLY ASN ILE ALA TYR ILE VAL GLY LYS ASP SEQRES 3 B 317 ASN LEU ALA ASP VAL VAL LEU PHE ASP ILE ALA GLU GLY SEQRES 4 B 317 ILE PRO GLN GLY LYS ALA LEU ASP ILE THR HIS SER MET SEQRES 5 B 317 VAL MET PHE GLY SER THR SER LYS VAL ILE GLY THR ASP SEQRES 6 B 317 ASP TYR ALA ASP ILE SER GLY SER ASP VAL VAL ILE ILE SEQRES 7 B 317 THR ALA SER ILE PRO GLY ARG PRO LYS ASP ASP ARG SER SEQRES 8 B 317 GLU LEU LEU PHE GLY ASN ALA ARG ILE LEU ASP SER VAL SEQRES 9 B 317 ALA GLU GLY VAL LYS LYS TYR CYS PRO ASN ALA PHE VAL SEQRES 10 B 317 ILE CYS ILE THR ASN PRO LEU ASP VAL MET VAL SER HIS SEQRES 11 B 317 PHE GLN LYS VAL SER GLY LEU PRO HIS ASN LYS VAL CYS SEQRES 12 B 317 GLY MET ALA GLY VAL LEU ASP SER SER ARG PHE ARG THR SEQRES 13 B 317 PHE ILE ALA GLN HIS PHE GLY VAL ASN ALA SER ASP VAL SEQRES 14 B 317 SER ALA ASN VAL ILE GLY GLY HIS GLY ASP GLY MET VAL SEQRES 15 B 317 PRO ALA THR SER SER VAL SER VAL GLY GLY VAL PRO LEU SEQRES 16 B 317 SER SER PHE ILE LYS GLN GLY LEU ILE THR GLN GLU GLN SEQRES 17 B 317 ILE ASP GLU ILE VAL CYS HIS THR ARG ILE ALA TRP LYS SEQRES 18 B 317 GLU VAL ALA ASP ASN LEU LYS THR GLY THR ALA TYR PHE SEQRES 19 B 317 ALA PRO ALA ALA ALA ALA VAL LYS MET ALA GLU ALA TYR SEQRES 20 B 317 LEU LYS ASP LYS LYS ALA VAL VAL PRO CYS SER ALA PHE SEQRES 21 B 317 CYS SER ASN HIS TYR GLY VAL LYS GLY ILE TYR MET GLY SEQRES 22 B 317 VAL PRO THR ILE ILE GLY LYS ASN GLY VAL GLU ASP ILE SEQRES 23 B 317 LEU GLU LEU ASP LEU THR PRO LEU GLU GLN LYS LEU LEU SEQRES 24 B 317 GLY GLU SER ILE ASN GLU VAL ASN THR ILE SER LYS VAL SEQRES 25 B 317 LEU ASP ASN ALA PRO HET A3D A 401 44 HET PYR A 901 6 HET A3D B 402 44 HET PYR B 902 6 HET GOL A 600 6 HET GOL A 601 6 HET GOL B 602 6 HETNAM A3D 3-ACETYLPYRIDINE ADENINE DINUCLEOTIDE HETNAM PYR PYRUVIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 A3D 2(C22 H28 N6 O14 P2) FORMUL 4 PYR 2(C3 H4 O3) FORMUL 7 GOL 3(C3 H8 O3) FORMUL 10 HOH *236(H2 O) HELIX 1 1 GLY A 29 ASP A 43 1 14 HELIX 2 2 GLY A 57 GLY A 73B 1 18 HELIX 3 3 ASP A 84 SER A 89 5 6 HELIX 4 4 ASP A 108 GLU A 111 5 4 HELIX 5 5 LEU A 112 CYS A 131 1 20 HELIX 6 6 PRO A 141 GLY A 154 1 14 HELIX 7 7 PRO A 156 ASN A 158 5 3 HELIX 8 8 ALA A 164 GLY A 181 1 18 HELIX 9 9 ASN A 183 SER A 185 5 3 HELIX 10 10 THR A 203 SER A 205 5 3 HELIX 11 11 LEU A 210A GLN A 215 1 7 HELIX 12 12 THR A 220 LYS A 243A 1 24 HELIX 13 13 TYR A 247 LYS A 263 1 17 HELIX 14 14 THR A 308 ASN A 331 1 24 HELIX 15 15 GLY B 29 ASP B 43 1 14 HELIX 16 16 GLY B 57 VAL B 71 1 15 HELIX 17 17 ASP B 84 SER B 89 5 6 HELIX 18 18 ASP B 108 GLU B 111 5 4 HELIX 19 19 LEU B 112 CYS B 131 1 20 HELIX 20 20 PRO B 141 GLY B 154 1 14 HELIX 21 21 PRO B 156 ASN B 158 5 3 HELIX 22 22 ALA B 164 GLY B 181 1 18 HELIX 23 23 ASN B 183 SER B 185 5 3 HELIX 24 24 THR B 203 SER B 205 5 3 HELIX 25 25 LEU B 210A GLN B 215 1 7 HELIX 26 26 THR B 220 LYS B 243A 1 24 HELIX 27 27 TYR B 247 LYS B 263 1 17 HELIX 28 28 THR B 308 ASN B 331 1 24 SHEET 1 A 6 VAL A 78 THR A 81 0 SHEET 2 A 6 ASP A 47 PHE A 52 1 N LEU A 51 O ILE A 79 SHEET 3 A 6 LYS A 22 ILE A 26 1 N VAL A 25 O PHE A 52 SHEET 4 A 6 VAL A 93 ILE A 96 1 O VAL A 93 N ALA A 24 SHEET 5 A 6 PHE A 134 CYS A 137 1 O ILE A 136 N VAL A 94 SHEET 6 A 6 VAL A 160 GLY A 162 1 O CYS A 161 N CYS A 137 SHEET 1 B 3 VAL A 187 SER A 188 0 SHEET 2 B 3 SER A 207 VAL A 208 -1 O SER A 207 N SER A 188 SHEET 3 B 3 VAL A 209C PRO A 209D-1 O VAL A 209C N VAL A 208 SHEET 1 C 2 VAL A 191 ILE A 192 0 SHEET 2 C 2 VAL A 200 PRO A 201 -1 O VAL A 200 N ILE A 192 SHEET 1 D 3 ALA A 267 CYS A 275 0 SHEET 2 D 3 ILE A 285 GLY A 294 -1 O THR A 291 N VAL A 269 SHEET 3 D 3 GLY A 297 ILE A 302 -1 O GLU A 299 N ILE A 292 SHEET 1 E 6 VAL B 78 THR B 81 0 SHEET 2 E 6 ASP B 47 PHE B 52 1 N LEU B 51 O ILE B 79 SHEET 3 E 6 LYS B 22 ILE B 26 1 N VAL B 25 O PHE B 52 SHEET 4 E 6 VAL B 93 ILE B 96 1 O ILE B 95 N ALA B 24 SHEET 5 E 6 PHE B 134 CYS B 137 1 O PHE B 134 N VAL B 94 SHEET 6 E 6 VAL B 160 GLY B 162 1 O CYS B 161 N CYS B 137 SHEET 1 F 3 VAL B 187 SER B 188 0 SHEET 2 F 3 SER B 207 VAL B 208 -1 O SER B 207 N SER B 188 SHEET 3 F 3 VAL B 209C PRO B 209D-1 O VAL B 209C N VAL B 208 SHEET 1 G 2 VAL B 191 ILE B 192 0 SHEET 2 G 2 VAL B 200 PRO B 201 -1 O VAL B 200 N ILE B 192 SHEET 1 H 3 ALA B 267 CYS B 275 0 SHEET 2 H 3 ILE B 285 GLY B 294 -1 O THR B 291 N VAL B 269 SHEET 3 H 3 GLY B 297 ILE B 302 -1 O GLU B 299 N ILE B 292 CISPEP 1 ASN A 140 PRO A 141 0 -0.11 CISPEP 2 ASN B 140 PRO B 141 0 -0.51 SITE 1 AC1 33 GLY A 29 GLN A 30 ILE A 31 PHE A 52 SITE 2 AC1 33 ASP A 53 ILE A 54 THR A 97 ALA A 98 SITE 3 AC1 33 SER A 99 LEU A 112 ILE A 119 ILE A 138 SITE 4 AC1 33 ASN A 140 MET A 163 LEU A 167 HIS A 195 SITE 5 AC1 33 GLU A 222 ALA A 246 PRO A 250 PYR A 901 SITE 6 AC1 33 HOH A 905 HOH A 906 HOH A 908 HOH A 925 SITE 7 AC1 33 HOH A 926 HOH A 929 HOH A 952 HOH A 969 SITE 8 AC1 33 HOH A 971 HOH A 976 HOH A 986 HOH A 994 SITE 9 AC1 33 HOH A1012 SITE 1 AC2 9 ARG A 109 ASN A 140 LEU A 167 ARG A 171 SITE 2 AC2 9 HIS A 195 TRP A 236 THR A 245 A3D A 401 SITE 3 AC2 9 HOH A 902 SITE 1 AC3 26 GLY B 29 GLN B 30 ILE B 31 PHE B 52 SITE 2 AC3 26 ASP B 53 ILE B 54 THR B 97 ALA B 98 SITE 3 AC3 26 SER B 99 LEU B 112 ASN B 116 ILE B 119 SITE 4 AC3 26 ILE B 138 ASN B 140 MET B 163 LEU B 167 SITE 5 AC3 26 HIS B 195 ALA B 246 PRO B 250 PYR B 902 SITE 6 AC3 26 HOH B 907 HOH B 908 HOH B 927 HOH B 938 SITE 7 AC3 26 HOH B 940 HOH B 990 SITE 1 AC4 9 ARG B 109 ASN B 140 LEU B 167 ARG B 171 SITE 2 AC4 9 HIS B 195 TRP B 236 THR B 245 A3D B 402 SITE 3 AC4 9 HOH B 909 SITE 1 AC5 4 PRO A 201 THR A 203 VAL A 229 GLU A 311 SITE 1 AC6 10 PRO A 141 LEU A 142 ASP A 143 VAL A 144 SITE 2 AC6 10 GLY A 194 HIS A 195 GLU A 321 VAL A 322 SITE 3 AC6 10 ILE A 325 HOH A 963 SITE 1 AC7 5 PRO B 201 THR B 203 GLU B 311 LEU B 314 SITE 2 AC7 5 HOH B 924 CRYST1 95.830 95.830 185.640 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010435 0.006025 0.000000 0.00000 SCALE2 0.000000 0.012049 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005387 0.00000