data_2EXF # _entry.id 2EXF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2EXF pdb_00002exf 10.2210/pdb2exf/pdb RCSB RCSB035211 ? ? WWPDB D_1000035211 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-04-24 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 5 'Structure model' 1 4 2024-05-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' pdbx_struct_oper_list 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_ref_seq_dif 9 4 'Structure model' struct_site 10 5 'Structure model' chem_comp_atom 11 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 29 4 'Structure model' '_struct_ref_seq_dif.details' 30 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2EXF _pdbx_database_status.recvd_initial_deposition_date 2005-11-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bourbigot, S.' 1 'Bouaziz, S.' 2 'Morellet, N.' 3 # _citation.id primary _citation.title 'How the HIV-1 nucleocapsid protein binds and destabilises the (-)primer binding site during reverse transcription.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 383 _citation.page_first 1112 _citation.page_last 1128 _citation.year 2008 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18773912 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2008.08.046 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bourbigot, S.' 1 ? primary 'Ramalanjaona, N.' 2 ? primary 'Boudier, C.' 3 ? primary 'Salgado, G.F.' 4 ? primary 'Roques, B.P.' 5 ? primary 'Mely, Y.' 6 ? primary 'Bouaziz, S.' 7 ? primary 'Morellet, N.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*GP*C)-3'" 4263.751 1 ? ? ? 'DNA (-) primer binding site' 2 polymer syn 'Nucleocapsid protein* (NC*)' 5022.822 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DC)(DC)(DT)(DG)(DT)(DT)(DC)(DG)(DG)(DG)(DC)' GTCCCTGTTCGGGC B ? 2 'polypeptide(L)' no no NVKCFNCGKEGHTARNCRAPRKKGCWKCGKEGHQMKDCTERQAN NVKCFNCGKEGHTARNCRAPRKKGCWKCGKEGHQMKDCTERQAN A ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DT n 1 3 DC n 1 4 DC n 1 5 DC n 1 6 DT n 1 7 DG n 1 8 DT n 1 9 DT n 1 10 DC n 1 11 DG n 1 12 DG n 1 13 DG n 1 14 DC n 2 1 ASN n 2 2 VAL n 2 3 LYS n 2 4 CYS n 2 5 PHE n 2 6 ASN n 2 7 CYS n 2 8 GLY n 2 9 LYS n 2 10 GLU n 2 11 GLY n 2 12 HIS n 2 13 THR n 2 14 ALA n 2 15 ARG n 2 16 ASN n 2 17 CYS n 2 18 ARG n 2 19 ALA n 2 20 PRO n 2 21 ARG n 2 22 LYS n 2 23 LYS n 2 24 GLY n 2 25 CYS n 2 26 TRP n 2 27 LYS n 2 28 CYS n 2 29 GLY n 2 30 LYS n 2 31 GLU n 2 32 GLY n 2 33 HIS n 2 34 GLN n 2 35 MET n 2 36 LYS n 2 37 ASP n 2 38 CYS n 2 39 THR n 2 40 GLU n 2 41 ARG n 2 42 GLN n 2 43 ALA n 2 44 ASN n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? 'the sequence is naturally found in human immunodeficiency virus type 1 (HIV-1)' 2 1 sample ? ? ? ? ? 'chemically synthesized by solid phase' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 101 101 DG G B . n A 1 2 DT 2 102 102 DT T B . n A 1 3 DC 3 103 103 DC C B . n A 1 4 DC 4 104 104 DC C B . n A 1 5 DC 5 105 105 DC C B . n A 1 6 DT 6 106 106 DT T B . n A 1 7 DG 7 107 107 DG G B . n A 1 8 DT 8 108 108 DT T B . n A 1 9 DT 9 109 109 DT T B . n A 1 10 DC 10 110 110 DC C B . n A 1 11 DG 11 111 111 DG G B . n A 1 12 DG 12 112 112 DG G B . n A 1 13 DG 13 113 113 DG G B . n A 1 14 DC 14 114 114 DC C B . n B 2 1 ASN 1 12 12 ASN ASN A . n B 2 2 VAL 2 13 13 VAL VAL A . n B 2 3 LYS 3 14 14 LYS LYS A . n B 2 4 CYS 4 15 15 CYS CYS A . n B 2 5 PHE 5 16 16 PHE PHE A . n B 2 6 ASN 6 17 17 ASN ASN A . n B 2 7 CYS 7 18 18 CYS CYS A . n B 2 8 GLY 8 19 19 GLY GLY A . n B 2 9 LYS 9 20 20 LYS LYS A . n B 2 10 GLU 10 21 21 GLU GLU A . n B 2 11 GLY 11 22 22 GLY GLY A . n B 2 12 HIS 12 23 23 HIS HIS A . n B 2 13 THR 13 24 24 THR THR A . n B 2 14 ALA 14 25 25 ALA ALA A . n B 2 15 ARG 15 26 26 ARG ARG A . n B 2 16 ASN 16 27 27 ASN ASN A . n B 2 17 CYS 17 28 28 CYS CYS A . n B 2 18 ARG 18 29 29 ARG ARG A . n B 2 19 ALA 19 30 30 ALA ALA A . n B 2 20 PRO 20 31 31 PRO PRO A . n B 2 21 ARG 21 32 32 ARG ARG A . n B 2 22 LYS 22 33 33 LYS LYS A . n B 2 23 LYS 23 34 34 LYS LYS A . n B 2 24 GLY 24 35 35 GLY GLY A . n B 2 25 CYS 25 36 36 CYS CYS A . n B 2 26 TRP 26 37 37 TRP TRP A . n B 2 27 LYS 27 38 38 LYS LYS A . n B 2 28 CYS 28 39 39 CYS CYS A . n B 2 29 GLY 29 40 40 GLY GLY A . n B 2 30 LYS 30 41 41 LYS LYS A . n B 2 31 GLU 31 42 42 GLU GLU A . n B 2 32 GLY 32 43 43 GLY GLY A . n B 2 33 HIS 33 44 44 HIS HIS A . n B 2 34 GLN 34 45 45 GLN GLN A . n B 2 35 MET 35 46 46 MET MET A . n B 2 36 LYS 36 47 47 LYS LYS A . n B 2 37 ASP 37 48 48 ASP ASP A . n B 2 38 CYS 38 49 49 CYS CYS A . n B 2 39 THR 39 50 50 THR THR A . n B 2 40 GLU 40 51 51 GLU GLU A . n B 2 41 ARG 41 52 52 ARG ARG A . n B 2 42 GLN 42 53 53 GLN GLN A . n B 2 43 ALA 43 54 54 ALA ALA A . n B 2 44 ASN 44 55 55 ASN ASN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 56 56 ZN ZN A . D 3 ZN 1 57 57 ZN ZN A . # _cell.entry_id 2EXF _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2EXF _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 2EXF _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _database_PDB_matrix.entry_id 2EXF _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2EXF _struct.title 'Solution structure of the HIV-1 nucleocapsid (NCp7(12-55)) complexed with the DNA (-) Primer Binding Site' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2EXF _struct_keywords.pdbx_keywords 'Viral Protein/DNA' _struct_keywords.text 'protein-DNA complex, stem-loop, bulge, zinc-finger, Viral Protein-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP POL_HV1PV P03368 2 VKCFNCGKEGHTARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 389 ? 2 PDB 2EXF 2EXF 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2EXF A 2 ? 44 ? P03368 389 ? 431 ? 13 55 2 2 2EXF B 1 ? 14 ? 2EXF 101 ? 114 ? 101 114 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2EXF _struct_ref_seq_dif.mon_id ASN _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P03368 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'cloning artifact' _struct_ref_seq_dif.pdbx_auth_seq_num 12 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B CYS 4 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 15 A ZN 56 1_555 ? ? ? ? ? ? ? 2.254 ? ? metalc2 metalc ? ? B CYS 7 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 18 A ZN 56 1_555 ? ? ? ? ? ? ? 2.252 ? ? metalc3 metalc ? ? B HIS 12 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 23 A ZN 56 1_555 ? ? ? ? ? ? ? 2.354 ? ? metalc4 metalc ? ? B CYS 17 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 28 A ZN 56 1_555 ? ? ? ? ? ? ? 2.244 ? ? metalc5 metalc ? ? B CYS 25 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 36 A ZN 57 1_555 ? ? ? ? ? ? ? 2.245 ? ? metalc6 metalc ? ? B CYS 28 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 39 A ZN 57 1_555 ? ? ? ? ? ? ? 2.230 ? ? metalc7 metalc ? ? B HIS 33 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 44 A ZN 57 1_555 ? ? ? ? ? ? ? 2.395 ? ? metalc8 metalc ? ? B CYS 38 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 49 A ZN 57 1_555 ? ? ? ? ? ? ? 2.254 ? ? hydrog1 hydrog ? ? A DG 1 N3 ? ? ? 1_555 A DC 4 N4 ? ? B DG 101 B DC 104 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DG 13 O6 ? ? B DG 101 B DG 113 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? hydrog3 hydrog ? ? A DC 3 N3 ? ? ? 1_555 A DG 13 N1 ? ? B DC 103 B DG 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 3 N4 ? ? ? 1_555 A DG 13 O6 ? ? B DC 103 B DG 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 3 O2 ? ? ? 1_555 A DG 13 N2 ? ? B DC 103 B DG 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 4 N3 ? ? ? 1_555 A DG 12 N1 ? ? B DC 104 B DG 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 4 N4 ? ? ? 1_555 A DG 12 O6 ? ? B DC 104 B DG 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 4 O2 ? ? ? 1_555 A DG 12 N2 ? ? B DC 104 B DG 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 5 N3 ? ? ? 1_555 A DG 11 N1 ? ? B DC 105 B DG 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 5 N4 ? ? ? 1_555 A DG 11 O6 ? ? B DC 105 B DG 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 5 O2 ? ? ? 1_555 A DG 11 N2 ? ? B DC 105 B DG 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? B CYS 4 ? A CYS 15 ? 1_555 ZN ? C ZN . ? A ZN 56 ? 1_555 SG ? B CYS 7 ? A CYS 18 ? 1_555 110.3 ? 2 SG ? B CYS 4 ? A CYS 15 ? 1_555 ZN ? C ZN . ? A ZN 56 ? 1_555 NE2 ? B HIS 12 ? A HIS 23 ? 1_555 110.6 ? 3 SG ? B CYS 7 ? A CYS 18 ? 1_555 ZN ? C ZN . ? A ZN 56 ? 1_555 NE2 ? B HIS 12 ? A HIS 23 ? 1_555 91.5 ? 4 SG ? B CYS 4 ? A CYS 15 ? 1_555 ZN ? C ZN . ? A ZN 56 ? 1_555 SG ? B CYS 17 ? A CYS 28 ? 1_555 108.8 ? 5 SG ? B CYS 7 ? A CYS 18 ? 1_555 ZN ? C ZN . ? A ZN 56 ? 1_555 SG ? B CYS 17 ? A CYS 28 ? 1_555 109.7 ? 6 NE2 ? B HIS 12 ? A HIS 23 ? 1_555 ZN ? C ZN . ? A ZN 56 ? 1_555 SG ? B CYS 17 ? A CYS 28 ? 1_555 124.3 ? 7 SG ? B CYS 25 ? A CYS 36 ? 1_555 ZN ? D ZN . ? A ZN 57 ? 1_555 SG ? B CYS 28 ? A CYS 39 ? 1_555 105.3 ? 8 SG ? B CYS 25 ? A CYS 36 ? 1_555 ZN ? D ZN . ? A ZN 57 ? 1_555 NE2 ? B HIS 33 ? A HIS 44 ? 1_555 119.7 ? 9 SG ? B CYS 28 ? A CYS 39 ? 1_555 ZN ? D ZN . ? A ZN 57 ? 1_555 NE2 ? B HIS 33 ? A HIS 44 ? 1_555 101.9 ? 10 SG ? B CYS 25 ? A CYS 36 ? 1_555 ZN ? D ZN . ? A ZN 57 ? 1_555 SG ? B CYS 38 ? A CYS 49 ? 1_555 108.6 ? 11 SG ? B CYS 28 ? A CYS 39 ? 1_555 ZN ? D ZN . ? A ZN 57 ? 1_555 SG ? B CYS 38 ? A CYS 49 ? 1_555 108.8 ? 12 NE2 ? B HIS 33 ? A HIS 44 ? 1_555 ZN ? D ZN . ? A ZN 57 ? 1_555 SG ? B CYS 38 ? A CYS 49 ? 1_555 111.7 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 56 ? 4 'BINDING SITE FOR RESIDUE ZN A 56' AC2 Software A ZN 57 ? 4 'BINDING SITE FOR RESIDUE ZN A 57' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS B 4 ? CYS A 15 . ? 1_555 ? 2 AC1 4 CYS B 7 ? CYS A 18 . ? 1_555 ? 3 AC1 4 HIS B 12 ? HIS A 23 . ? 1_555 ? 4 AC1 4 CYS B 17 ? CYS A 28 . ? 1_555 ? 5 AC2 4 CYS B 25 ? CYS A 36 . ? 1_555 ? 6 AC2 4 CYS B 28 ? CYS A 39 . ? 1_555 ? 7 AC2 4 HIS B 33 ? HIS A 44 . ? 1_555 ? 8 AC2 4 CYS B 38 ? CYS A 49 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DG 101 ? ? "C1'" B DG 101 ? ? N9 B DG 101 ? ? 110.27 108.30 1.97 0.30 N 2 1 "O4'" B DT 102 ? ? "C1'" B DT 102 ? ? N1 B DT 102 ? ? 110.76 108.30 2.46 0.30 N 3 1 "O4'" B DC 104 ? ? "C1'" B DC 104 ? ? N1 B DC 104 ? ? 112.87 108.30 4.57 0.30 N 4 1 "O4'" B DC 105 ? ? "C1'" B DC 105 ? ? N1 B DC 105 ? ? 110.79 108.30 2.49 0.30 N 5 1 "O4'" B DT 106 ? ? "C1'" B DT 106 ? ? N1 B DT 106 ? ? 111.14 108.30 2.84 0.30 N 6 1 C6 B DT 106 ? ? C5 B DT 106 ? ? C7 B DT 106 ? ? 118.09 122.90 -4.81 0.60 N 7 1 "O4'" B DG 107 ? ? "C1'" B DG 107 ? ? N9 B DG 107 ? ? 112.75 108.30 4.45 0.30 N 8 1 "O4'" B DT 108 ? ? "C1'" B DT 108 ? ? N1 B DT 108 ? ? 111.57 108.30 3.27 0.30 N 9 1 "O4'" B DT 109 ? ? "C1'" B DT 109 ? ? N1 B DT 109 ? ? 113.86 108.30 5.56 0.30 N 10 1 C6 B DT 109 ? ? C5 B DT 109 ? ? C7 B DT 109 ? ? 118.74 122.90 -4.16 0.60 N 11 1 "O4'" B DC 110 ? ? "C1'" B DC 110 ? ? N1 B DC 110 ? ? 111.76 108.30 3.46 0.30 N 12 1 "O4'" B DG 111 ? ? "C1'" B DG 111 ? ? N9 B DG 111 ? ? 114.73 108.30 6.43 0.30 N 13 1 "O4'" B DG 112 ? ? "C1'" B DG 112 ? ? N9 B DG 112 ? ? 112.09 108.30 3.79 0.30 N 14 1 "O4'" B DG 113 ? ? "C1'" B DG 113 ? ? N9 B DG 113 ? ? 112.18 108.30 3.88 0.30 N 15 2 "C4'" B DG 101 ? ? "C3'" B DG 101 ? ? "C2'" B DG 101 ? ? 95.54 102.20 -6.66 0.70 N 16 2 "O4'" B DG 101 ? ? "C1'" B DG 101 ? ? N9 B DG 101 ? ? 112.88 108.30 4.58 0.30 N 17 2 "O4'" B DC 103 ? ? "C1'" B DC 103 ? ? N1 B DC 103 ? ? 113.42 108.30 5.12 0.30 N 18 2 "O4'" B DC 104 ? ? "C1'" B DC 104 ? ? N1 B DC 104 ? ? 111.09 108.30 2.79 0.30 N 19 2 "O4'" B DC 105 ? ? "C1'" B DC 105 ? ? N1 B DC 105 ? ? 110.33 108.30 2.03 0.30 N 20 2 C6 B DT 106 ? ? C5 B DT 106 ? ? C7 B DT 106 ? ? 118.76 122.90 -4.14 0.60 N 21 2 "C4'" B DG 107 ? ? "C3'" B DG 107 ? ? "C2'" B DG 107 ? ? 97.81 102.20 -4.39 0.70 N 22 2 "O4'" B DG 107 ? ? "C1'" B DG 107 ? ? N9 B DG 107 ? ? 112.56 108.30 4.26 0.30 N 23 2 "O4'" B DT 109 ? ? "C1'" B DT 109 ? ? N1 B DT 109 ? ? 114.83 108.30 6.53 0.30 N 24 2 C6 B DT 109 ? ? C5 B DT 109 ? ? C7 B DT 109 ? ? 118.40 122.90 -4.50 0.60 N 25 2 "O4'" B DC 110 ? ? "C1'" B DC 110 ? ? N1 B DC 110 ? ? 119.19 108.30 10.89 0.30 N 26 2 "O4'" B DG 111 ? ? "C1'" B DG 111 ? ? N9 B DG 111 ? ? 114.53 108.30 6.23 0.30 N 27 3 "O4'" B DG 101 ? ? "C1'" B DG 101 ? ? N9 B DG 101 ? ? 110.82 108.30 2.52 0.30 N 28 3 "O4'" B DT 102 ? ? "C1'" B DT 102 ? ? N1 B DT 102 ? ? 113.46 108.30 5.16 0.30 N 29 3 "O4'" B DC 103 ? ? "C1'" B DC 103 ? ? N1 B DC 103 ? ? 112.51 108.30 4.21 0.30 N 30 3 "O4'" B DC 105 ? ? "C1'" B DC 105 ? ? N1 B DC 105 ? ? 112.52 108.30 4.22 0.30 N 31 3 C6 B DT 106 ? ? C5 B DT 106 ? ? C7 B DT 106 ? ? 119.19 122.90 -3.71 0.60 N 32 3 "O4'" B DG 107 ? ? "C1'" B DG 107 ? ? N9 B DG 107 ? ? 110.47 108.30 2.17 0.30 N 33 3 "O4'" B DT 108 ? ? "C1'" B DT 108 ? ? N1 B DT 108 ? ? 110.72 108.30 2.42 0.30 N 34 3 "O4'" B DT 109 ? ? "C1'" B DT 109 ? ? N1 B DT 109 ? ? 112.83 108.30 4.53 0.30 N 35 3 C6 B DT 109 ? ? C5 B DT 109 ? ? C7 B DT 109 ? ? 118.77 122.90 -4.13 0.60 N 36 3 "O4'" B DC 110 ? ? "C1'" B DC 110 ? ? N1 B DC 110 ? ? 114.90 108.30 6.60 0.30 N 37 3 N1 B DC 110 ? ? C2 B DC 110 ? ? O2 B DC 110 ? ? 122.85 118.90 3.95 0.60 N 38 3 "O4'" B DG 111 ? ? "C1'" B DG 111 ? ? N9 B DG 111 ? ? 111.53 108.30 3.23 0.30 N 39 3 "O4'" B DG 112 ? ? "C1'" B DG 112 ? ? N9 B DG 112 ? ? 110.85 108.30 2.55 0.30 N 40 3 "O4'" B DG 113 ? ? "C1'" B DG 113 ? ? N9 B DG 113 ? ? 111.37 108.30 3.07 0.30 N 41 3 CA A CYS 49 ? ? CB A CYS 49 ? ? SG A CYS 49 ? ? 123.45 114.20 9.25 1.10 N 42 4 "O4'" B DG 101 ? ? "C1'" B DG 101 ? ? N9 B DG 101 ? ? 110.15 108.30 1.85 0.30 N 43 4 "O4'" B DC 103 ? ? "C1'" B DC 103 ? ? N1 B DC 103 ? ? 110.62 108.30 2.32 0.30 N 44 4 "O4'" B DC 105 ? ? "C1'" B DC 105 ? ? N1 B DC 105 ? ? 112.75 108.30 4.45 0.30 N 45 4 "O4'" B DT 106 ? ? "C1'" B DT 106 ? ? N1 B DT 106 ? ? 111.35 108.30 3.05 0.30 N 46 4 N3 B DT 106 ? ? C2 B DT 106 ? ? O2 B DT 106 ? ? 118.45 122.30 -3.85 0.60 N 47 4 C6 B DT 106 ? ? C5 B DT 106 ? ? C7 B DT 106 ? ? 119.14 122.90 -3.76 0.60 N 48 4 "O4'" B DG 107 ? ? "C1'" B DG 107 ? ? N9 B DG 107 ? ? 111.84 108.30 3.54 0.30 N 49 4 "O4'" B DT 109 ? ? "C4'" B DT 109 ? ? "C3'" B DT 109 ? ? 101.19 104.50 -3.31 0.40 N 50 4 "C5'" B DT 109 ? ? "C4'" B DT 109 ? ? "C3'" B DT 109 ? ? 124.62 115.70 8.92 1.20 N 51 4 "C1'" B DT 109 ? ? "O4'" B DT 109 ? ? "C4'" B DT 109 ? ? 103.04 110.10 -7.06 1.00 N 52 4 "O4'" B DT 109 ? ? "C1'" B DT 109 ? ? N1 B DT 109 ? ? 115.74 108.30 7.44 0.30 N 53 4 C6 B DT 109 ? ? C5 B DT 109 ? ? C7 B DT 109 ? ? 117.35 122.90 -5.55 0.60 N 54 4 "O4'" B DC 110 ? ? "C1'" B DC 110 ? ? N1 B DC 110 ? ? 119.44 108.30 11.14 0.30 N 55 4 "O4'" B DG 111 ? ? "C1'" B DG 111 ? ? N9 B DG 111 ? ? 113.17 108.30 4.87 0.30 N 56 4 "O4'" B DG 112 ? ? "C1'" B DG 112 ? ? N9 B DG 112 ? ? 113.11 108.30 4.81 0.30 N 57 4 "O4'" B DG 113 ? ? "C1'" B DG 113 ? ? N9 B DG 113 ? ? 114.31 108.30 6.01 0.30 N 58 5 "O4'" B DC 103 ? ? "C1'" B DC 103 ? ? N1 B DC 103 ? ? 113.82 108.30 5.52 0.30 N 59 5 "O4'" B DC 105 ? ? "C1'" B DC 105 ? ? N1 B DC 105 ? ? 112.21 108.30 3.91 0.30 N 60 5 "O4'" B DT 106 ? ? "C1'" B DT 106 ? ? N1 B DT 106 ? ? 110.84 108.30 2.54 0.30 N 61 5 C6 B DT 106 ? ? C5 B DT 106 ? ? C7 B DT 106 ? ? 118.70 122.90 -4.20 0.60 N 62 5 "C4'" B DG 107 ? ? "C3'" B DG 107 ? ? "C2'" B DG 107 ? ? 97.40 102.20 -4.80 0.70 N 63 5 "O4'" B DT 109 ? ? "C1'" B DT 109 ? ? N1 B DT 109 ? ? 114.93 108.30 6.63 0.30 N 64 5 C6 B DT 109 ? ? C5 B DT 109 ? ? C7 B DT 109 ? ? 118.61 122.90 -4.29 0.60 N 65 5 "O4'" B DC 110 ? ? "C1'" B DC 110 ? ? N1 B DC 110 ? ? 118.31 108.30 10.01 0.30 N 66 5 "O4'" B DG 111 ? ? "C1'" B DG 111 ? ? N9 B DG 111 ? ? 112.30 108.30 4.00 0.30 N 67 5 "O4'" B DG 113 ? ? "C1'" B DG 113 ? ? N9 B DG 113 ? ? 112.81 108.30 4.51 0.30 N 68 5 "C3'" B DG 113 ? ? "O3'" B DG 113 ? ? P B DC 114 ? ? 127.37 119.70 7.67 1.20 Y 69 6 "O4'" B DG 101 ? ? "C1'" B DG 101 ? ? N9 B DG 101 ? ? 110.46 108.30 2.16 0.30 N 70 6 "O4'" B DT 102 ? ? "C1'" B DT 102 ? ? N1 B DT 102 ? ? 111.87 108.30 3.57 0.30 N 71 6 C6 B DT 102 ? ? C5 B DT 102 ? ? C7 B DT 102 ? ? 119.08 122.90 -3.82 0.60 N 72 6 "O4'" B DC 103 ? ? "C1'" B DC 103 ? ? N1 B DC 103 ? ? 113.31 108.30 5.01 0.30 N 73 6 "O4'" B DC 104 ? ? "C1'" B DC 104 ? ? N1 B DC 104 ? ? 110.92 108.30 2.62 0.30 N 74 6 "O4'" B DC 105 ? ? "C1'" B DC 105 ? ? N1 B DC 105 ? ? 112.21 108.30 3.91 0.30 N 75 6 N3 B DT 106 ? ? C2 B DT 106 ? ? O2 B DT 106 ? ? 118.35 122.30 -3.95 0.60 N 76 6 "C4'" B DG 107 ? ? "C3'" B DG 107 ? ? "C2'" B DG 107 ? ? 97.97 102.20 -4.23 0.70 N 77 6 "O4'" B DG 107 ? ? "C1'" B DG 107 ? ? N9 B DG 107 ? ? 110.40 108.30 2.10 0.30 N 78 6 "O4'" B DT 108 ? ? "C1'" B DT 108 ? ? N1 B DT 108 ? ? 110.68 108.30 2.38 0.30 N 79 6 "O4'" B DT 109 ? ? "C1'" B DT 109 ? ? N1 B DT 109 ? ? 114.81 108.30 6.51 0.30 N 80 6 C6 B DT 109 ? ? C5 B DT 109 ? ? C7 B DT 109 ? ? 118.53 122.90 -4.37 0.60 N 81 6 "O4'" B DC 110 ? ? "C1'" B DC 110 ? ? N1 B DC 110 ? ? 119.32 108.30 11.02 0.30 N 82 6 N1 B DC 110 ? ? C2 B DC 110 ? ? O2 B DC 110 ? ? 122.54 118.90 3.64 0.60 N 83 6 "O4'" B DG 111 ? ? "C1'" B DG 111 ? ? N9 B DG 111 ? ? 115.41 108.30 7.11 0.30 N 84 6 "O4'" B DG 112 ? ? "C1'" B DG 112 ? ? N9 B DG 112 ? ? 110.37 108.30 2.07 0.30 N 85 6 "O4'" B DG 113 ? ? "C1'" B DG 113 ? ? N9 B DG 113 ? ? 111.15 108.30 2.85 0.30 N 86 7 "O4'" B DG 101 ? ? "C1'" B DG 101 ? ? N9 B DG 101 ? ? 110.25 108.30 1.95 0.30 N 87 7 "O4'" B DT 102 ? ? "C1'" B DT 102 ? ? N1 B DT 102 ? ? 113.58 108.30 5.28 0.30 N 88 7 "O4'" B DC 103 ? ? "C1'" B DC 103 ? ? N1 B DC 103 ? ? 112.09 108.30 3.79 0.30 N 89 7 "O4'" B DC 104 ? ? "C1'" B DC 104 ? ? N1 B DC 104 ? ? 111.28 108.30 2.98 0.30 N 90 7 "O4'" B DC 105 ? ? "C1'" B DC 105 ? ? N1 B DC 105 ? ? 113.03 108.30 4.73 0.30 N 91 7 N3 B DT 106 ? ? C2 B DT 106 ? ? O2 B DT 106 ? ? 118.35 122.30 -3.95 0.60 N 92 7 "O4'" B DG 107 ? ? "C1'" B DG 107 ? ? N9 B DG 107 ? ? 114.13 108.30 5.83 0.30 N 93 7 "O4'" B DT 108 ? ? "C1'" B DT 108 ? ? N1 B DT 108 ? ? 111.12 108.30 2.82 0.30 N 94 7 "O4'" B DT 109 ? ? "C1'" B DT 109 ? ? N1 B DT 109 ? ? 114.27 108.30 5.97 0.30 N 95 7 C6 B DT 109 ? ? C5 B DT 109 ? ? C7 B DT 109 ? ? 118.61 122.90 -4.29 0.60 N 96 7 "O4'" B DC 110 ? ? "C4'" B DC 110 ? ? "C3'" B DC 110 ? ? 101.93 104.50 -2.57 0.40 N 97 7 "O4'" B DC 110 ? ? "C1'" B DC 110 ? ? N1 B DC 110 ? ? 117.88 108.30 9.58 0.30 N 98 7 "O4'" B DG 111 ? ? "C1'" B DG 111 ? ? N9 B DG 111 ? ? 111.61 108.30 3.31 0.30 N 99 7 "O4'" B DG 112 ? ? "C1'" B DG 112 ? ? N9 B DG 112 ? ? 111.18 108.30 2.88 0.30 N 100 8 "O4'" B DG 101 ? ? "C1'" B DG 101 ? ? N9 B DG 101 ? ? 114.28 108.30 5.98 0.30 N 101 8 "O4'" B DC 103 ? ? "C1'" B DC 103 ? ? N1 B DC 103 ? ? 113.22 108.30 4.92 0.30 N 102 8 "O4'" B DC 104 ? ? "C1'" B DC 104 ? ? N1 B DC 104 ? ? 110.21 108.30 1.91 0.30 N 103 8 "O4'" B DC 105 ? ? "C1'" B DC 105 ? ? N1 B DC 105 ? ? 113.04 108.30 4.74 0.30 N 104 8 N3 B DT 106 ? ? C2 B DT 106 ? ? O2 B DT 106 ? ? 118.49 122.30 -3.81 0.60 N 105 8 "O4'" B DG 107 ? ? "C1'" B DG 107 ? ? N9 B DG 107 ? ? 113.13 108.30 4.83 0.30 N 106 8 "O4'" B DT 108 ? ? "C1'" B DT 108 ? ? N1 B DT 108 ? ? 111.20 108.30 2.90 0.30 N 107 8 "O4'" B DT 109 ? ? "C1'" B DT 109 ? ? N1 B DT 109 ? ? 113.02 108.30 4.72 0.30 N 108 8 C6 B DT 109 ? ? C5 B DT 109 ? ? C7 B DT 109 ? ? 119.00 122.90 -3.90 0.60 N 109 8 "O4'" B DC 110 ? ? "C1'" B DC 110 ? ? N1 B DC 110 ? ? 116.52 108.30 8.22 0.30 N 110 8 N1 B DC 110 ? ? C2 B DC 110 ? ? O2 B DC 110 ? ? 123.02 118.90 4.12 0.60 N 111 8 "O4'" B DG 111 ? ? "C1'" B DG 111 ? ? N9 B DG 111 ? ? 115.26 108.30 6.96 0.30 N 112 8 "O4'" B DG 113 ? ? "C1'" B DG 113 ? ? N9 B DG 113 ? ? 110.40 108.30 2.10 0.30 N 113 9 "O4'" B DG 101 ? ? "C1'" B DG 101 ? ? N9 B DG 101 ? ? 111.77 108.30 3.47 0.30 N 114 9 "C1'" B DC 103 ? ? "O4'" B DC 103 ? ? "C4'" B DC 103 ? ? 103.49 110.10 -6.61 1.00 N 115 9 "O4'" B DC 103 ? ? "C1'" B DC 103 ? ? N1 B DC 103 ? ? 115.00 108.30 6.70 0.30 N 116 9 "O4'" B DC 104 ? ? "C1'" B DC 104 ? ? N1 B DC 104 ? ? 110.29 108.30 1.99 0.30 N 117 9 "O4'" B DC 105 ? ? "C1'" B DC 105 ? ? N1 B DC 105 ? ? 112.69 108.30 4.39 0.30 N 118 9 N3 B DT 106 ? ? C2 B DT 106 ? ? O2 B DT 106 ? ? 118.26 122.30 -4.04 0.60 N 119 9 C6 B DT 106 ? ? C5 B DT 106 ? ? C7 B DT 106 ? ? 118.21 122.90 -4.69 0.60 N 120 9 "C4'" B DG 107 ? ? "C3'" B DG 107 ? ? "C2'" B DG 107 ? ? 97.38 102.20 -4.82 0.70 N 121 9 "O4'" B DG 107 ? ? "C1'" B DG 107 ? ? "C2'" B DG 107 ? ? 110.31 106.80 3.51 0.50 N 122 9 C6 B DT 108 ? ? C5 B DT 108 ? ? C7 B DT 108 ? ? 118.99 122.90 -3.91 0.60 N 123 9 "O4'" B DT 109 ? ? "C1'" B DT 109 ? ? N1 B DT 109 ? ? 112.31 108.30 4.01 0.30 N 124 9 C6 B DT 109 ? ? C5 B DT 109 ? ? C7 B DT 109 ? ? 118.40 122.90 -4.50 0.60 N 125 9 "O4'" B DC 110 ? ? "C4'" B DC 110 ? ? "C3'" B DC 110 ? ? 101.24 104.50 -3.26 0.40 N 126 9 "O4'" B DC 110 ? ? "C1'" B DC 110 ? ? N1 B DC 110 ? ? 119.73 108.30 11.43 0.30 N 127 9 "O4'" B DG 112 ? ? "C1'" B DG 112 ? ? N9 B DG 112 ? ? 113.05 108.30 4.75 0.30 N 128 9 "O4'" B DG 113 ? ? "C1'" B DG 113 ? ? N9 B DG 113 ? ? 110.17 108.30 1.87 0.30 N 129 10 "C4'" B DG 101 ? ? "C3'" B DG 101 ? ? "C2'" B DG 101 ? ? 95.60 102.20 -6.60 0.70 N 130 10 "O4'" B DG 101 ? ? "C1'" B DG 101 ? ? N9 B DG 101 ? ? 113.65 108.30 5.35 0.30 N 131 10 "O4'" B DC 103 ? ? "C1'" B DC 103 ? ? N1 B DC 103 ? ? 111.63 108.30 3.33 0.30 N 132 10 "O4'" B DC 104 ? ? "C1'" B DC 104 ? ? N1 B DC 104 ? ? 110.45 108.30 2.15 0.30 N 133 10 "O4'" B DT 106 ? ? "C1'" B DT 106 ? ? N1 B DT 106 ? ? 110.57 108.30 2.27 0.30 N 134 10 C6 B DT 106 ? ? C5 B DT 106 ? ? C7 B DT 106 ? ? 118.47 122.90 -4.43 0.60 N 135 10 "C4'" B DG 107 ? ? "C3'" B DG 107 ? ? "C2'" B DG 107 ? ? 97.70 102.20 -4.50 0.70 N 136 10 "O4'" B DT 109 ? ? "C1'" B DT 109 ? ? N1 B DT 109 ? ? 113.63 108.30 5.33 0.30 N 137 10 C6 B DT 109 ? ? C5 B DT 109 ? ? C7 B DT 109 ? ? 118.42 122.90 -4.48 0.60 N 138 10 "O4'" B DC 110 ? ? "C1'" B DC 110 ? ? N1 B DC 110 ? ? 119.60 108.30 11.30 0.30 N 139 10 "O4'" B DG 111 ? ? "C1'" B DG 111 ? ? N9 B DG 111 ? ? 115.46 108.30 7.16 0.30 N 140 10 "O4'" B DG 112 ? ? "C1'" B DG 112 ? ? N9 B DG 112 ? ? 110.48 108.30 2.18 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 13 ? ? -160.86 111.22 2 1 CYS A 49 ? ? -29.67 135.35 3 1 GLU A 51 ? ? -72.90 -100.36 4 1 ALA A 54 ? ? -166.53 -49.50 5 2 CYS A 18 ? ? -142.43 -26.16 6 2 GLU A 21 ? ? -78.08 -164.72 7 2 PRO A 31 ? ? -58.63 101.57 8 2 LYS A 38 ? ? -73.50 -76.54 9 2 CYS A 49 ? ? -37.26 139.14 10 2 GLU A 51 ? ? -79.79 -103.89 11 2 ARG A 52 ? ? -155.93 56.98 12 3 VAL A 13 ? ? -163.69 103.41 13 3 LYS A 34 ? ? -102.82 -69.19 14 3 LYS A 38 ? ? -77.60 -70.22 15 3 GLU A 51 ? ? -69.72 -81.26 16 3 GLN A 53 ? ? -72.47 -79.98 17 3 ALA A 54 ? ? -86.86 49.50 18 4 CYS A 18 ? ? -158.71 -29.91 19 4 LYS A 38 ? ? -65.65 -74.26 20 4 GLU A 51 ? ? -51.64 -73.68 21 4 ALA A 54 ? ? -154.61 -36.26 22 5 CYS A 18 ? ? -160.54 -48.84 23 5 LYS A 34 ? ? -125.50 -56.69 24 5 LYS A 38 ? ? -63.62 -72.29 25 5 GLU A 51 ? ? -51.93 -77.22 26 6 CYS A 15 ? ? -39.48 126.98 27 6 CYS A 18 ? ? -155.45 -30.33 28 6 LYS A 34 ? ? -135.68 -50.35 29 6 CYS A 49 ? ? -38.75 141.35 30 6 GLU A 51 ? ? -82.89 -83.67 31 7 CYS A 18 ? ? -144.62 -17.20 32 7 CYS A 28 ? ? -33.94 107.57 33 7 LYS A 38 ? ? -68.66 -70.83 34 7 CYS A 49 ? ? -31.35 129.99 35 7 GLU A 51 ? ? -72.85 -81.64 36 7 ARG A 52 ? ? 59.33 80.58 37 8 CYS A 18 ? ? -159.08 -37.73 38 8 LYS A 38 ? ? -68.17 -77.70 39 8 CYS A 49 ? ? -31.34 131.23 40 8 GLU A 51 ? ? -52.65 -73.29 41 8 ARG A 52 ? ? -176.36 65.18 42 9 CYS A 18 ? ? -155.20 -31.13 43 9 CYS A 28 ? ? -26.00 117.28 44 9 LYS A 38 ? ? -81.06 -73.44 45 9 CYS A 49 ? ? -29.71 137.17 46 9 GLU A 51 ? ? -63.94 -77.26 47 10 CYS A 18 ? ? -159.08 -29.55 48 10 THR A 24 ? ? -117.03 -166.68 49 10 CYS A 36 ? ? -32.09 114.37 50 10 LYS A 38 ? ? -76.94 -75.20 51 10 CYS A 49 ? ? -22.45 122.83 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG B 101 ? ? 0.083 'SIDE CHAIN' 2 1 DC B 104 ? ? 0.086 'SIDE CHAIN' 3 1 DC B 105 ? ? 0.082 'SIDE CHAIN' 4 1 DC B 110 ? ? 0.079 'SIDE CHAIN' 5 2 DC B 104 ? ? 0.076 'SIDE CHAIN' 6 2 DT B 109 ? ? 0.062 'SIDE CHAIN' 7 2 DC B 110 ? ? 0.073 'SIDE CHAIN' 8 3 DG B 107 ? ? 0.169 'SIDE CHAIN' 9 3 DT B 109 ? ? 0.075 'SIDE CHAIN' 10 3 DC B 110 ? ? 0.063 'SIDE CHAIN' 11 4 DC B 104 ? ? 0.090 'SIDE CHAIN' 12 4 DG B 107 ? ? 0.112 'SIDE CHAIN' 13 4 DT B 108 ? ? 0.082 'SIDE CHAIN' 14 4 DT B 109 ? ? 0.142 'SIDE CHAIN' 15 4 DC B 114 ? ? 0.090 'SIDE CHAIN' 16 5 DC B 104 ? ? 0.097 'SIDE CHAIN' 17 5 DC B 105 ? ? 0.077 'SIDE CHAIN' 18 5 DT B 106 ? ? 0.089 'SIDE CHAIN' 19 5 DG B 107 ? ? 0.063 'SIDE CHAIN' 20 5 DT B 109 ? ? 0.067 'SIDE CHAIN' 21 5 DC B 110 ? ? 0.099 'SIDE CHAIN' 22 5 DG B 111 ? ? 0.079 'SIDE CHAIN' 23 5 DC B 114 ? ? 0.061 'SIDE CHAIN' 24 6 DC B 105 ? ? 0.074 'SIDE CHAIN' 25 6 DG B 111 ? ? 0.054 'SIDE CHAIN' 26 7 DC B 104 ? ? 0.074 'SIDE CHAIN' 27 7 DC B 105 ? ? 0.091 'SIDE CHAIN' 28 8 DC B 104 ? ? 0.088 'SIDE CHAIN' 29 8 DC B 105 ? ? 0.071 'SIDE CHAIN' 30 8 DT B 106 ? ? 0.100 'SIDE CHAIN' 31 8 DG B 107 ? ? 0.067 'SIDE CHAIN' 32 8 DT B 109 ? ? 0.073 'SIDE CHAIN' 33 8 DC B 110 ? ? 0.071 'SIDE CHAIN' 34 8 DG B 112 ? ? 0.058 'SIDE CHAIN' 35 8 PHE A 16 ? ? 0.153 'SIDE CHAIN' 36 9 DC B 105 ? ? 0.100 'SIDE CHAIN' 37 9 DT B 106 ? ? 0.065 'SIDE CHAIN' 38 9 DG B 111 ? ? 0.060 'SIDE CHAIN' 39 9 DG B 112 ? ? 0.050 'SIDE CHAIN' 40 9 PHE A 16 ? ? 0.097 'SIDE CHAIN' 41 10 DC B 104 ? ? 0.087 'SIDE CHAIN' 42 10 DG B 107 ? ? 0.097 'SIDE CHAIN' 43 10 DT B 109 ? ? 0.108 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 2EXF _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria ;structures with acceptable covalent geometry,structures with favorable non-bond energy,structures with the least restraint violations,structures with the lowest energy ; _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2EXF _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '1mM NCp7(12-55), 1mM DP(-)PBS, 90% H2O, 10% D2O' '90% H2O/10% D2O' 2 '1mM NCp7(12-55), 1mM DP(-)PBS, 90% H2O, 10% D2O, 30mM NaCl, 0.2mM MgCl2' '90% H2O, 10% D2O, 30mM NaCl, 0.2mM MgCl2' 3 '2mM NCp7(12-55), 1mM DP(-)PBS, 90% H2O, 10% D2O' '90% H2O/10% D2O' 4 '2mM NCp7(12-55), 1mM DP(-)PBS, 90% H2O, 10% D2O, 30mM NaCl, 0.2mM MgCl2' '90% H2O, 10% D2O, 30mM NaCl, 0.2mM MgCl2' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 283 ambient 6.5 '1mM protein, 1mM oligonucleotide' . K 2 283 ambient 6.5 '1mM protein, 1mM oligonucleotide, 30mM NaCl, 0.2mM MgCl2' . K 3 293 ambient 6.5 '1mM protein, 1mM oligonucleotide' . K 4 293 ambient 6.5 '1mM protein, 1mM oligonucleotide, 30mM NaCl, 0.2mM MgCl2' . K 5 303 ambient 6.5 '1mM protein, 1mM oligonucleotide' . K 6 303 ambient 6.5 '1mM protein, 1mM oligonucleotide, 30mM NaCl, 0.2mM MgCl2' . K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 '2D TOCSY' 1 2 1 '2D NOESY' 1 3 1 '2D TOCSY' 2 4 1 '2D NOESY' 2 5 2 '2D TOCSY' 1 6 2 '2D NOESY' 1 # _pdbx_nmr_refine.entry_id 2EXF _pdbx_nmr_refine.method ;restrained molecular dynamics restrained simulated annealing energy minimization ; _pdbx_nmr_refine.details 'structures are based on 705 restraints (NOE derived distance constraints)' _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.0 Bruker 1 processing XwinNMR 3.0 Bruker 2 refinement Discover 2.98 Accelrys 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DC OP3 O N N 88 DC P P N N 89 DC OP1 O N N 90 DC OP2 O N N 91 DC "O5'" O N N 92 DC "C5'" C N N 93 DC "C4'" C N R 94 DC "O4'" O N N 95 DC "C3'" C N S 96 DC "O3'" O N N 97 DC "C2'" C N N 98 DC "C1'" C N R 99 DC N1 N N N 100 DC C2 C N N 101 DC O2 O N N 102 DC N3 N N N 103 DC C4 C N N 104 DC N4 N N N 105 DC C5 C N N 106 DC C6 C N N 107 DC HOP3 H N N 108 DC HOP2 H N N 109 DC "H5'" H N N 110 DC "H5''" H N N 111 DC "H4'" H N N 112 DC "H3'" H N N 113 DC "HO3'" H N N 114 DC "H2'" H N N 115 DC "H2''" H N N 116 DC "H1'" H N N 117 DC H41 H N N 118 DC H42 H N N 119 DC H5 H N N 120 DC H6 H N N 121 DG OP3 O N N 122 DG P P N N 123 DG OP1 O N N 124 DG OP2 O N N 125 DG "O5'" O N N 126 DG "C5'" C N N 127 DG "C4'" C N R 128 DG "O4'" O N N 129 DG "C3'" C N S 130 DG "O3'" O N N 131 DG "C2'" C N N 132 DG "C1'" C N R 133 DG N9 N Y N 134 DG C8 C Y N 135 DG N7 N Y N 136 DG C5 C Y N 137 DG C6 C N N 138 DG O6 O N N 139 DG N1 N N N 140 DG C2 C N N 141 DG N2 N N N 142 DG N3 N N N 143 DG C4 C Y N 144 DG HOP3 H N N 145 DG HOP2 H N N 146 DG "H5'" H N N 147 DG "H5''" H N N 148 DG "H4'" H N N 149 DG "H3'" H N N 150 DG "HO3'" H N N 151 DG "H2'" H N N 152 DG "H2''" H N N 153 DG "H1'" H N N 154 DG H8 H N N 155 DG H1 H N N 156 DG H21 H N N 157 DG H22 H N N 158 DT OP3 O N N 159 DT P P N N 160 DT OP1 O N N 161 DT OP2 O N N 162 DT "O5'" O N N 163 DT "C5'" C N N 164 DT "C4'" C N R 165 DT "O4'" O N N 166 DT "C3'" C N S 167 DT "O3'" O N N 168 DT "C2'" C N N 169 DT "C1'" C N R 170 DT N1 N N N 171 DT C2 C N N 172 DT O2 O N N 173 DT N3 N N N 174 DT C4 C N N 175 DT O4 O N N 176 DT C5 C N N 177 DT C7 C N N 178 DT C6 C N N 179 DT HOP3 H N N 180 DT HOP2 H N N 181 DT "H5'" H N N 182 DT "H5''" H N N 183 DT "H4'" H N N 184 DT "H3'" H N N 185 DT "HO3'" H N N 186 DT "H2'" H N N 187 DT "H2''" H N N 188 DT "H1'" H N N 189 DT H3 H N N 190 DT H71 H N N 191 DT H72 H N N 192 DT H73 H N N 193 DT H6 H N N 194 GLN N N N N 195 GLN CA C N S 196 GLN C C N N 197 GLN O O N N 198 GLN CB C N N 199 GLN CG C N N 200 GLN CD C N N 201 GLN OE1 O N N 202 GLN NE2 N N N 203 GLN OXT O N N 204 GLN H H N N 205 GLN H2 H N N 206 GLN HA H N N 207 GLN HB2 H N N 208 GLN HB3 H N N 209 GLN HG2 H N N 210 GLN HG3 H N N 211 GLN HE21 H N N 212 GLN HE22 H N N 213 GLN HXT H N N 214 GLU N N N N 215 GLU CA C N S 216 GLU C C N N 217 GLU O O N N 218 GLU CB C N N 219 GLU CG C N N 220 GLU CD C N N 221 GLU OE1 O N N 222 GLU OE2 O N N 223 GLU OXT O N N 224 GLU H H N N 225 GLU H2 H N N 226 GLU HA H N N 227 GLU HB2 H N N 228 GLU HB3 H N N 229 GLU HG2 H N N 230 GLU HG3 H N N 231 GLU HE2 H N N 232 GLU HXT H N N 233 GLY N N N N 234 GLY CA C N N 235 GLY C C N N 236 GLY O O N N 237 GLY OXT O N N 238 GLY H H N N 239 GLY H2 H N N 240 GLY HA2 H N N 241 GLY HA3 H N N 242 GLY HXT H N N 243 HIS N N N N 244 HIS CA C N S 245 HIS C C N N 246 HIS O O N N 247 HIS CB C N N 248 HIS CG C Y N 249 HIS ND1 N Y N 250 HIS CD2 C Y N 251 HIS CE1 C Y N 252 HIS NE2 N Y N 253 HIS OXT O N N 254 HIS H H N N 255 HIS H2 H N N 256 HIS HA H N N 257 HIS HB2 H N N 258 HIS HB3 H N N 259 HIS HD1 H N N 260 HIS HD2 H N N 261 HIS HE1 H N N 262 HIS HE2 H N N 263 HIS HXT H N N 264 LYS N N N N 265 LYS CA C N S 266 LYS C C N N 267 LYS O O N N 268 LYS CB C N N 269 LYS CG C N N 270 LYS CD C N N 271 LYS CE C N N 272 LYS NZ N N N 273 LYS OXT O N N 274 LYS H H N N 275 LYS H2 H N N 276 LYS HA H N N 277 LYS HB2 H N N 278 LYS HB3 H N N 279 LYS HG2 H N N 280 LYS HG3 H N N 281 LYS HD2 H N N 282 LYS HD3 H N N 283 LYS HE2 H N N 284 LYS HE3 H N N 285 LYS HZ1 H N N 286 LYS HZ2 H N N 287 LYS HZ3 H N N 288 LYS HXT H N N 289 MET N N N N 290 MET CA C N S 291 MET C C N N 292 MET O O N N 293 MET CB C N N 294 MET CG C N N 295 MET SD S N N 296 MET CE C N N 297 MET OXT O N N 298 MET H H N N 299 MET H2 H N N 300 MET HA H N N 301 MET HB2 H N N 302 MET HB3 H N N 303 MET HG2 H N N 304 MET HG3 H N N 305 MET HE1 H N N 306 MET HE2 H N N 307 MET HE3 H N N 308 MET HXT H N N 309 PHE N N N N 310 PHE CA C N S 311 PHE C C N N 312 PHE O O N N 313 PHE CB C N N 314 PHE CG C Y N 315 PHE CD1 C Y N 316 PHE CD2 C Y N 317 PHE CE1 C Y N 318 PHE CE2 C Y N 319 PHE CZ C Y N 320 PHE OXT O N N 321 PHE H H N N 322 PHE H2 H N N 323 PHE HA H N N 324 PHE HB2 H N N 325 PHE HB3 H N N 326 PHE HD1 H N N 327 PHE HD2 H N N 328 PHE HE1 H N N 329 PHE HE2 H N N 330 PHE HZ H N N 331 PHE HXT H N N 332 PRO N N N N 333 PRO CA C N S 334 PRO C C N N 335 PRO O O N N 336 PRO CB C N N 337 PRO CG C N N 338 PRO CD C N N 339 PRO OXT O N N 340 PRO H H N N 341 PRO HA H N N 342 PRO HB2 H N N 343 PRO HB3 H N N 344 PRO HG2 H N N 345 PRO HG3 H N N 346 PRO HD2 H N N 347 PRO HD3 H N N 348 PRO HXT H N N 349 THR N N N N 350 THR CA C N S 351 THR C C N N 352 THR O O N N 353 THR CB C N R 354 THR OG1 O N N 355 THR CG2 C N N 356 THR OXT O N N 357 THR H H N N 358 THR H2 H N N 359 THR HA H N N 360 THR HB H N N 361 THR HG1 H N N 362 THR HG21 H N N 363 THR HG22 H N N 364 THR HG23 H N N 365 THR HXT H N N 366 TRP N N N N 367 TRP CA C N S 368 TRP C C N N 369 TRP O O N N 370 TRP CB C N N 371 TRP CG C Y N 372 TRP CD1 C Y N 373 TRP CD2 C Y N 374 TRP NE1 N Y N 375 TRP CE2 C Y N 376 TRP CE3 C Y N 377 TRP CZ2 C Y N 378 TRP CZ3 C Y N 379 TRP CH2 C Y N 380 TRP OXT O N N 381 TRP H H N N 382 TRP H2 H N N 383 TRP HA H N N 384 TRP HB2 H N N 385 TRP HB3 H N N 386 TRP HD1 H N N 387 TRP HE1 H N N 388 TRP HE3 H N N 389 TRP HZ2 H N N 390 TRP HZ3 H N N 391 TRP HH2 H N N 392 TRP HXT H N N 393 VAL N N N N 394 VAL CA C N S 395 VAL C C N N 396 VAL O O N N 397 VAL CB C N N 398 VAL CG1 C N N 399 VAL CG2 C N N 400 VAL OXT O N N 401 VAL H H N N 402 VAL H2 H N N 403 VAL HA H N N 404 VAL HB H N N 405 VAL HG11 H N N 406 VAL HG12 H N N 407 VAL HG13 H N N 408 VAL HG21 H N N 409 VAL HG22 H N N 410 VAL HG23 H N N 411 VAL HXT H N N 412 ZN ZN ZN N N 413 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DC OP3 P sing N N 83 DC OP3 HOP3 sing N N 84 DC P OP1 doub N N 85 DC P OP2 sing N N 86 DC P "O5'" sing N N 87 DC OP2 HOP2 sing N N 88 DC "O5'" "C5'" sing N N 89 DC "C5'" "C4'" sing N N 90 DC "C5'" "H5'" sing N N 91 DC "C5'" "H5''" sing N N 92 DC "C4'" "O4'" sing N N 93 DC "C4'" "C3'" sing N N 94 DC "C4'" "H4'" sing N N 95 DC "O4'" "C1'" sing N N 96 DC "C3'" "O3'" sing N N 97 DC "C3'" "C2'" sing N N 98 DC "C3'" "H3'" sing N N 99 DC "O3'" "HO3'" sing N N 100 DC "C2'" "C1'" sing N N 101 DC "C2'" "H2'" sing N N 102 DC "C2'" "H2''" sing N N 103 DC "C1'" N1 sing N N 104 DC "C1'" "H1'" sing N N 105 DC N1 C2 sing N N 106 DC N1 C6 sing N N 107 DC C2 O2 doub N N 108 DC C2 N3 sing N N 109 DC N3 C4 doub N N 110 DC C4 N4 sing N N 111 DC C4 C5 sing N N 112 DC N4 H41 sing N N 113 DC N4 H42 sing N N 114 DC C5 C6 doub N N 115 DC C5 H5 sing N N 116 DC C6 H6 sing N N 117 DG OP3 P sing N N 118 DG OP3 HOP3 sing N N 119 DG P OP1 doub N N 120 DG P OP2 sing N N 121 DG P "O5'" sing N N 122 DG OP2 HOP2 sing N N 123 DG "O5'" "C5'" sing N N 124 DG "C5'" "C4'" sing N N 125 DG "C5'" "H5'" sing N N 126 DG "C5'" "H5''" sing N N 127 DG "C4'" "O4'" sing N N 128 DG "C4'" "C3'" sing N N 129 DG "C4'" "H4'" sing N N 130 DG "O4'" "C1'" sing N N 131 DG "C3'" "O3'" sing N N 132 DG "C3'" "C2'" sing N N 133 DG "C3'" "H3'" sing N N 134 DG "O3'" "HO3'" sing N N 135 DG "C2'" "C1'" sing N N 136 DG "C2'" "H2'" sing N N 137 DG "C2'" "H2''" sing N N 138 DG "C1'" N9 sing N N 139 DG "C1'" "H1'" sing N N 140 DG N9 C8 sing Y N 141 DG N9 C4 sing Y N 142 DG C8 N7 doub Y N 143 DG C8 H8 sing N N 144 DG N7 C5 sing Y N 145 DG C5 C6 sing N N 146 DG C5 C4 doub Y N 147 DG C6 O6 doub N N 148 DG C6 N1 sing N N 149 DG N1 C2 sing N N 150 DG N1 H1 sing N N 151 DG C2 N2 sing N N 152 DG C2 N3 doub N N 153 DG N2 H21 sing N N 154 DG N2 H22 sing N N 155 DG N3 C4 sing N N 156 DT OP3 P sing N N 157 DT OP3 HOP3 sing N N 158 DT P OP1 doub N N 159 DT P OP2 sing N N 160 DT P "O5'" sing N N 161 DT OP2 HOP2 sing N N 162 DT "O5'" "C5'" sing N N 163 DT "C5'" "C4'" sing N N 164 DT "C5'" "H5'" sing N N 165 DT "C5'" "H5''" sing N N 166 DT "C4'" "O4'" sing N N 167 DT "C4'" "C3'" sing N N 168 DT "C4'" "H4'" sing N N 169 DT "O4'" "C1'" sing N N 170 DT "C3'" "O3'" sing N N 171 DT "C3'" "C2'" sing N N 172 DT "C3'" "H3'" sing N N 173 DT "O3'" "HO3'" sing N N 174 DT "C2'" "C1'" sing N N 175 DT "C2'" "H2'" sing N N 176 DT "C2'" "H2''" sing N N 177 DT "C1'" N1 sing N N 178 DT "C1'" "H1'" sing N N 179 DT N1 C2 sing N N 180 DT N1 C6 sing N N 181 DT C2 O2 doub N N 182 DT C2 N3 sing N N 183 DT N3 C4 sing N N 184 DT N3 H3 sing N N 185 DT C4 O4 doub N N 186 DT C4 C5 sing N N 187 DT C5 C7 sing N N 188 DT C5 C6 doub N N 189 DT C7 H71 sing N N 190 DT C7 H72 sing N N 191 DT C7 H73 sing N N 192 DT C6 H6 sing N N 193 GLN N CA sing N N 194 GLN N H sing N N 195 GLN N H2 sing N N 196 GLN CA C sing N N 197 GLN CA CB sing N N 198 GLN CA HA sing N N 199 GLN C O doub N N 200 GLN C OXT sing N N 201 GLN CB CG sing N N 202 GLN CB HB2 sing N N 203 GLN CB HB3 sing N N 204 GLN CG CD sing N N 205 GLN CG HG2 sing N N 206 GLN CG HG3 sing N N 207 GLN CD OE1 doub N N 208 GLN CD NE2 sing N N 209 GLN NE2 HE21 sing N N 210 GLN NE2 HE22 sing N N 211 GLN OXT HXT sing N N 212 GLU N CA sing N N 213 GLU N H sing N N 214 GLU N H2 sing N N 215 GLU CA C sing N N 216 GLU CA CB sing N N 217 GLU CA HA sing N N 218 GLU C O doub N N 219 GLU C OXT sing N N 220 GLU CB CG sing N N 221 GLU CB HB2 sing N N 222 GLU CB HB3 sing N N 223 GLU CG CD sing N N 224 GLU CG HG2 sing N N 225 GLU CG HG3 sing N N 226 GLU CD OE1 doub N N 227 GLU CD OE2 sing N N 228 GLU OE2 HE2 sing N N 229 GLU OXT HXT sing N N 230 GLY N CA sing N N 231 GLY N H sing N N 232 GLY N H2 sing N N 233 GLY CA C sing N N 234 GLY CA HA2 sing N N 235 GLY CA HA3 sing N N 236 GLY C O doub N N 237 GLY C OXT sing N N 238 GLY OXT HXT sing N N 239 HIS N CA sing N N 240 HIS N H sing N N 241 HIS N H2 sing N N 242 HIS CA C sing N N 243 HIS CA CB sing N N 244 HIS CA HA sing N N 245 HIS C O doub N N 246 HIS C OXT sing N N 247 HIS CB CG sing N N 248 HIS CB HB2 sing N N 249 HIS CB HB3 sing N N 250 HIS CG ND1 sing Y N 251 HIS CG CD2 doub Y N 252 HIS ND1 CE1 doub Y N 253 HIS ND1 HD1 sing N N 254 HIS CD2 NE2 sing Y N 255 HIS CD2 HD2 sing N N 256 HIS CE1 NE2 sing Y N 257 HIS CE1 HE1 sing N N 258 HIS NE2 HE2 sing N N 259 HIS OXT HXT sing N N 260 LYS N CA sing N N 261 LYS N H sing N N 262 LYS N H2 sing N N 263 LYS CA C sing N N 264 LYS CA CB sing N N 265 LYS CA HA sing N N 266 LYS C O doub N N 267 LYS C OXT sing N N 268 LYS CB CG sing N N 269 LYS CB HB2 sing N N 270 LYS CB HB3 sing N N 271 LYS CG CD sing N N 272 LYS CG HG2 sing N N 273 LYS CG HG3 sing N N 274 LYS CD CE sing N N 275 LYS CD HD2 sing N N 276 LYS CD HD3 sing N N 277 LYS CE NZ sing N N 278 LYS CE HE2 sing N N 279 LYS CE HE3 sing N N 280 LYS NZ HZ1 sing N N 281 LYS NZ HZ2 sing N N 282 LYS NZ HZ3 sing N N 283 LYS OXT HXT sing N N 284 MET N CA sing N N 285 MET N H sing N N 286 MET N H2 sing N N 287 MET CA C sing N N 288 MET CA CB sing N N 289 MET CA HA sing N N 290 MET C O doub N N 291 MET C OXT sing N N 292 MET CB CG sing N N 293 MET CB HB2 sing N N 294 MET CB HB3 sing N N 295 MET CG SD sing N N 296 MET CG HG2 sing N N 297 MET CG HG3 sing N N 298 MET SD CE sing N N 299 MET CE HE1 sing N N 300 MET CE HE2 sing N N 301 MET CE HE3 sing N N 302 MET OXT HXT sing N N 303 PHE N CA sing N N 304 PHE N H sing N N 305 PHE N H2 sing N N 306 PHE CA C sing N N 307 PHE CA CB sing N N 308 PHE CA HA sing N N 309 PHE C O doub N N 310 PHE C OXT sing N N 311 PHE CB CG sing N N 312 PHE CB HB2 sing N N 313 PHE CB HB3 sing N N 314 PHE CG CD1 doub Y N 315 PHE CG CD2 sing Y N 316 PHE CD1 CE1 sing Y N 317 PHE CD1 HD1 sing N N 318 PHE CD2 CE2 doub Y N 319 PHE CD2 HD2 sing N N 320 PHE CE1 CZ doub Y N 321 PHE CE1 HE1 sing N N 322 PHE CE2 CZ sing Y N 323 PHE CE2 HE2 sing N N 324 PHE CZ HZ sing N N 325 PHE OXT HXT sing N N 326 PRO N CA sing N N 327 PRO N CD sing N N 328 PRO N H sing N N 329 PRO CA C sing N N 330 PRO CA CB sing N N 331 PRO CA HA sing N N 332 PRO C O doub N N 333 PRO C OXT sing N N 334 PRO CB CG sing N N 335 PRO CB HB2 sing N N 336 PRO CB HB3 sing N N 337 PRO CG CD sing N N 338 PRO CG HG2 sing N N 339 PRO CG HG3 sing N N 340 PRO CD HD2 sing N N 341 PRO CD HD3 sing N N 342 PRO OXT HXT sing N N 343 THR N CA sing N N 344 THR N H sing N N 345 THR N H2 sing N N 346 THR CA C sing N N 347 THR CA CB sing N N 348 THR CA HA sing N N 349 THR C O doub N N 350 THR C OXT sing N N 351 THR CB OG1 sing N N 352 THR CB CG2 sing N N 353 THR CB HB sing N N 354 THR OG1 HG1 sing N N 355 THR CG2 HG21 sing N N 356 THR CG2 HG22 sing N N 357 THR CG2 HG23 sing N N 358 THR OXT HXT sing N N 359 TRP N CA sing N N 360 TRP N H sing N N 361 TRP N H2 sing N N 362 TRP CA C sing N N 363 TRP CA CB sing N N 364 TRP CA HA sing N N 365 TRP C O doub N N 366 TRP C OXT sing N N 367 TRP CB CG sing N N 368 TRP CB HB2 sing N N 369 TRP CB HB3 sing N N 370 TRP CG CD1 doub Y N 371 TRP CG CD2 sing Y N 372 TRP CD1 NE1 sing Y N 373 TRP CD1 HD1 sing N N 374 TRP CD2 CE2 doub Y N 375 TRP CD2 CE3 sing Y N 376 TRP NE1 CE2 sing Y N 377 TRP NE1 HE1 sing N N 378 TRP CE2 CZ2 sing Y N 379 TRP CE3 CZ3 doub Y N 380 TRP CE3 HE3 sing N N 381 TRP CZ2 CH2 doub Y N 382 TRP CZ2 HZ2 sing N N 383 TRP CZ3 CH2 sing Y N 384 TRP CZ3 HZ3 sing N N 385 TRP CH2 HH2 sing N N 386 TRP OXT HXT sing N N 387 VAL N CA sing N N 388 VAL N H sing N N 389 VAL N H2 sing N N 390 VAL CA C sing N N 391 VAL CA CB sing N N 392 VAL CA HA sing N N 393 VAL C O doub N N 394 VAL C OXT sing N N 395 VAL CB CG1 sing N N 396 VAL CB CG2 sing N N 397 VAL CB HB sing N N 398 VAL CG1 HG11 sing N N 399 VAL CG1 HG12 sing N N 400 VAL CG1 HG13 sing N N 401 VAL CG2 HG21 sing N N 402 VAL CG2 HG22 sing N N 403 VAL CG2 HG23 sing N N 404 VAL OXT HXT sing N N 405 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2EXF 'b-form double helix' 2EXF 'hairpin loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 3 1_555 A DG 13 1_555 -0.262 -0.194 -1.866 38.452 1.721 -4.309 1 B_DC103:DG113_B B 103 ? B 113 ? 19 1 1 A DC 4 1_555 A DG 12 1_555 0.710 -0.256 -0.142 -23.156 2.222 -1.855 2 B_DC104:DG112_B B 104 ? B 112 ? 19 1 1 A DC 5 1_555 A DG 11 1_555 0.403 -0.214 -0.328 -6.422 20.673 -4.853 3 B_DC105:DG111_B B 105 ? B 111 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 3 1_555 A DG 13 1_555 A DC 4 1_555 A DG 12 1_555 -0.123 -2.101 5.101 -14.041 7.592 36.451 -4.434 -2.297 4.354 11.485 21.240 39.684 1 BB_DC103DC104:DG112DG113_BB B 103 ? B 113 ? B 104 ? B 112 ? 1 A DC 4 1_555 A DG 12 1_555 A DC 5 1_555 A DG 11 1_555 0.272 0.302 3.047 1.766 10.244 22.166 -2.335 -0.116 2.910 24.955 -4.303 24.455 2 BB_DC104DC105:DG111DG112_BB B 104 ? B 112 ? B 105 ? B 111 ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.type ? # _atom_sites.entry_id 2EXF _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S ZN # loop_