HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 08-NOV-05 2EXN TITLE SOLUTION STRUCTURE FOR THE PROTEIN CODED BY GENE LOCUS BB0938 OF TITLE 2 BORDETELLA BRONCHISEPTICA. NORTHEAST STRUCTURAL GENOMICS TARGET TITLE 3 BOR11. COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN BOR11; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BORDETELLA BRONCHISEPTICA; SOURCE 3 ORGANISM_TAXID: 518; SOURCE 4 GENE: BB0938; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PMGK; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PET21D; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PBOR11-21 KEYWDS BETA BARREL CONTAINING FOLD; AUTOSTRUCTURE; AUTOASSIGN; NMR KEYWDS 2 STRUCTURE; BOR11, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, UNKNOWN KEYWDS 4 FUNCTION EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR P.ROSSI,T.RAMELOT,R.XIAO,C.K.HO,L.-C.MA,T.B.ACTON,M.A.KENNEDY, AUTHOR 2 G.T.MONTELIONE,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 4 24-JAN-18 2EXN 1 AUTHOR JRNL REMARK REVDAT 3 24-FEB-09 2EXN 1 VERSN REVDAT 2 07-FEB-06 2EXN 1 JRNL REVDAT 1 15-NOV-05 2EXN 0 SPRSDE 15-NOV-05 2EXN 2B2M JRNL AUTH P.ROSSI,T.RAMELOT,R.XIAO,C.K.HO,L.-C.MA,T.B.ACTON, JRNL AUTH 2 M.A.KENNEDY,G.T.MONTELIONE JRNL TITL (1)H, (13)C, AND (15)N RESONANCE ASSIGNMENTS FOR THE PROTEIN JRNL TITL 2 CODED BY GENE LOCUS BB0938 OF BORDETELLA BRONCHISEPTICA JRNL REF J.BIOMOL.NMR V. 33 197 2005 JRNL REFN ISSN 0925-2738 JRNL PMID 16331425 JRNL DOI 10.1007/S10858-005-2593-3 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CNS 1.1 REMARK 3 AUTHORS : VARIAN INC. (VNMR), BRUNGER (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EXN COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-NOV-05. REMARK 100 THE DEPOSITION ID IS D_1000035219. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 100 MM NACL REMARK 210 PRESSURE : ATMOSPHERIC ATM REMARK 210 SAMPLE CONTENTS : 0.7MM BOR11 (U-13C,15N), 0.02% REMARK 210 NAN3, 10MM DTT, 5MM CACL2, 100MM REMARK 210 NACL, 20MM MES, PH 6.5; 0.5MM REMARK 210 BOR11 (U-13C,15N), 0.02% NAN3, REMARK 210 10MM DTT, 5MM CACL2, 100MM NACL, REMARK 210 20MM MES, PH 6.5; 0.8MM BOR11 (5% REMARK 210 13C,U-15N), 0.02% NAN3, 10MM REMARK 210 DTT, 5MM CACL2, 100MM NACL, 20MM REMARK 210 MES, PH 6.5 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY; 4D_13C- REMARK 210 SEPARATED_NOESY; HNCA-J; HI-RES REMARK 210 13C-HSQC FOR VL STEREOSPECIFIC; REMARK 210 HET-NOE REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 750 MHZ; 800 MHZ; 500 REMARK 210 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE 2.1, REMARK 210 AUTOSTRUCTURE 2.1.1, AUTOASSIGN REMARK 210 1.15, SPARKY 3.91, XPLOR(NIH) REMARK 210 2.0.6, DYANA 1.5 REMARK 210 METHOD USED : CS ASSIGNMENT: BACKBONE REMARK 210 AUTOASSIGN, MANUAL SIDECHAIN REMARK 210 HCCH-COSY AND TOCSYS. REMARK 210 AUTOSTRUCTURE FOR NOESY ASSIGN. REMARK 210 HYPER DIHEDRAL, DYANA, XPLOR(NIH) REMARK 210 , AND CNS FORCE-FIELD FOR REMARK 210 SIMULATED ANNEALING (DYANA,XPLOR REMARK 210 RUN WITHIN AUTOSTRUCTURE GUI) REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 56 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: AUTOQF SCORES AFTER CNS WITH EXPLICIT H2O REFINEMENT: REMARK 210 FINAL M-SCORE: 0.188 REMARK 210 FINAL DP-SCORE: 0.73 (RECALL=0.986, PRECISION=0.857, F-MEASURE= REMARK 210 0.917) REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 HIS A 131 REMARK 465 HIS A 132 REMARK 465 HIS A 133 REMARK 465 HIS A 134 REMARK 465 HIS A 135 REMARK 465 HIS A 136 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD1 HIS A 118 OD2 ASP A 120 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 10 -70.95 -73.88 REMARK 500 1 GLU A 47 46.00 -95.66 REMARK 500 1 MET A 54 84.15 -67.50 REMARK 500 1 PRO A 62 81.23 -66.98 REMARK 500 1 LEU A 65 -158.64 -68.67 REMARK 500 1 LEU A 71 -74.22 -54.21 REMARK 500 1 ASP A 72 28.84 -150.73 REMARK 500 1 GLU A 75 23.82 -144.79 REMARK 500 1 ASP A 76 -160.53 -109.38 REMARK 500 1 VAL A 80 99.74 -68.35 REMARK 500 1 PRO A 111 90.88 -62.64 REMARK 500 1 ALA A 122 -77.97 67.42 REMARK 500 1 VAL A 124 -30.14 -133.90 REMARK 500 1 ARG A 125 -37.97 78.13 REMARK 500 1 TRP A 126 138.35 77.73 REMARK 500 1 SER A 128 24.12 -79.01 REMARK 500 2 SER A 2 -38.21 -131.55 REMARK 500 2 LEU A 28 -177.27 -177.78 REMARK 500 2 MET A 54 91.85 -68.38 REMARK 500 2 PRO A 62 107.08 -46.16 REMARK 500 2 LEU A 65 -165.87 -67.70 REMARK 500 2 ASP A 72 88.55 75.29 REMARK 500 2 GLU A 75 29.72 -73.53 REMARK 500 2 PRO A 111 96.71 -60.26 REMARK 500 2 GLU A 123 -140.07 65.79 REMARK 500 2 VAL A 124 100.63 65.67 REMARK 500 2 TRP A 126 151.50 72.58 REMARK 500 2 LEU A 129 79.78 64.64 REMARK 500 3 SER A 2 -158.72 62.57 REMARK 500 3 THR A 16 31.66 -87.41 REMARK 500 3 GLU A 47 54.62 -92.68 REMARK 500 3 PRO A 62 98.03 -60.95 REMARK 500 3 LEU A 65 -154.38 -69.71 REMARK 500 3 ILE A 74 -85.48 -86.15 REMARK 500 3 GLU A 88 16.08 -143.81 REMARK 500 3 PRO A 111 97.91 -55.20 REMARK 500 3 GLU A 123 -135.00 -140.37 REMARK 500 3 VAL A 124 94.44 67.34 REMARK 500 3 TRP A 126 151.56 70.61 REMARK 500 3 PRO A 127 120.50 -37.02 REMARK 500 3 SER A 128 40.35 -96.07 REMARK 500 4 THR A 4 -137.61 40.34 REMARK 500 4 ALA A 10 -73.03 -72.89 REMARK 500 4 GLU A 47 38.97 -85.69 REMARK 500 4 MET A 54 98.13 -59.81 REMARK 500 4 PRO A 62 102.74 -57.71 REMARK 500 4 LEU A 65 -159.10 -69.99 REMARK 500 4 ASP A 76 -89.44 -87.07 REMARK 500 4 PRO A 111 90.53 -66.48 REMARK 500 4 PRO A 119 -5.36 -57.58 REMARK 500 REMARK 500 THIS ENTRY HAS 121 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6693 RELATED DB: BMRB REMARK 900 COMPLETE NMR RESONANCE ASSIGNMENT. CONTAINS RAW DATA FILES REMARK 900 RELATED ID: BER44 RELATED DB: TARGETDB DBREF 2EXN A 1 120 UNP Q7WNU7 Q7WNU7_BORBR 1 120 SEQADV 2EXN MET A 121 UNP Q7WNU7 EXPRESSION TAG SEQADV 2EXN ALA A 122 UNP Q7WNU7 EXPRESSION TAG SEQADV 2EXN GLU A 123 UNP Q7WNU7 EXPRESSION TAG SEQADV 2EXN VAL A 124 UNP Q7WNU7 EXPRESSION TAG SEQADV 2EXN ARG A 125 UNP Q7WNU7 EXPRESSION TAG SEQADV 2EXN TRP A 126 UNP Q7WNU7 EXPRESSION TAG SEQADV 2EXN PRO A 127 UNP Q7WNU7 EXPRESSION TAG SEQADV 2EXN SER A 128 UNP Q7WNU7 EXPRESSION TAG SEQADV 2EXN LEU A 129 UNP Q7WNU7 EXPRESSION TAG SEQADV 2EXN GLU A 130 UNP Q7WNU7 EXPRESSION TAG SEQADV 2EXN HIS A 131 UNP Q7WNU7 EXPRESSION TAG SEQADV 2EXN HIS A 132 UNP Q7WNU7 EXPRESSION TAG SEQADV 2EXN HIS A 133 UNP Q7WNU7 EXPRESSION TAG SEQADV 2EXN HIS A 134 UNP Q7WNU7 EXPRESSION TAG SEQADV 2EXN HIS A 135 UNP Q7WNU7 EXPRESSION TAG SEQADV 2EXN HIS A 136 UNP Q7WNU7 EXPRESSION TAG SEQRES 1 A 136 MET SER THR THR ALA TYR GLN PRO ILE ALA GLU CYS GLY SEQRES 2 A 136 ALA THR THR GLN SER GLU ALA ALA ALA TYR GLN LYS ARG SEQRES 3 A 136 TRP LEU VAL ALA ASN ASP ALA GLY GLN TRP LEU ASN ARG SEQRES 4 A 136 ASP LEU CYS PRO ARG LEU ALA GLU VAL SER VAL GLU LEU SEQRES 5 A 136 ARG MET GLY TYR LEU VAL LEU LYS ALA PRO GLY MET LEU SEQRES 6 A 136 ARG LEU ASP ILE PRO LEU ASP VAL ILE GLU ASP ASP ASP SEQRES 7 A 136 SER VAL ARG TYR GLN MET LEU VAL GLY GLU GLN THR VAL SEQRES 8 A 136 ASP VAL VAL ASP GLU GLY GLU LEU ALA ALA ALA TRP ILE SEQRES 9 A 136 SER ASN HIS ALA GLY VAL PRO CYS ARG ILE LEU LYS VAL SEQRES 10 A 136 HIS PRO ASP MET ALA GLU VAL ARG TRP PRO SER LEU GLU SEQRES 11 A 136 HIS HIS HIS HIS HIS HIS HELIX 1 1 GLN A 17 TYR A 23 5 7 HELIX 2 2 CYS A 42 GLU A 47 5 6 HELIX 3 3 GLY A 97 ALA A 108 1 12 SHEET 1 A 2 TYR A 6 ILE A 9 0 SHEET 2 A 2 GLY A 13 THR A 15 -1 O THR A 15 N TYR A 6 SHEET 1 B 5 TRP A 36 LEU A 37 0 SHEET 2 B 5 TRP A 27 ASN A 31 -1 N VAL A 29 O LEU A 37 SHEET 3 B 5 CYS A 112 VAL A 117 -1 O LEU A 115 N LEU A 28 SHEET 4 B 5 GLN A 89 VAL A 94 -1 N VAL A 94 O LYS A 116 SHEET 5 B 5 TYR A 82 VAL A 86 -1 N TYR A 82 O VAL A 93 SHEET 1 C 3 SER A 49 LEU A 52 0 SHEET 2 C 3 TYR A 56 LYS A 60 -1 O LYS A 60 N SER A 49 SHEET 3 C 3 ARG A 66 PRO A 70 -1 O ILE A 69 N LEU A 57 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1