HEADER OXIDOREDUCTASE 08-NOV-05 2EXR TITLE X-RAY STRUCTURE OF CYTOKININ OXIDASE/DEHYDROGENASE (CKX) FROM TITLE 2 ARABIDOPSIS THALIANA AT5G21482 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOKININ DEHYDROGENASE 7; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CYTOKININ OXIDASE 7, CKO7, ATCKX7, ATCKX5; COMPND 5 EC: 1.5.99.12; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: CKX7, CKX5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B834 P(RARE2); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PVP 16 KEYWDS AT5G21482.1, CYTOKININ OXIDASE/DEHYDROGENASE, CKX, STRUCTURAL KEYWDS 2 GENOMICS, PROTEIN STRUCTURE INITIATIVE, PSI, CENTER FOR EUKARYOTIC KEYWDS 3 STRUCTURAL GENOMICS, CESG, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR G.E.WESENBERG,G.N.PHILLIPS JR.,B.W.HAN,E.BITTO,C.A.BINGMAN,E.BAE, AUTHOR 2 CENTER FOR EUKARYOTIC STRUCTURAL GENOMICS (CESG) REVDAT 8 06-NOV-24 2EXR 1 REMARK SEQADV LINK REVDAT 7 18-OCT-17 2EXR 1 REMARK REVDAT 6 28-MAR-12 2EXR 1 JRNL VERSN REVDAT 5 24-FEB-09 2EXR 1 VERSN REVDAT 4 18-MAR-08 2EXR 1 JRNL REVDAT 3 11-MAR-08 2EXR 1 JRNL REVDAT 2 22-JAN-08 2EXR 1 JRNL REVDAT 1 29-NOV-05 2EXR 0 JRNL AUTH E.BAE,C.A.BINGMAN,E.BITTO,D.J.ACETI,G.N.PHILLIPS JRNL TITL CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA CYTOKININ JRNL TITL 2 DEHYDROGENASE. JRNL REF PROTEINS V. 70 303 2008 JRNL REFN ISSN 0887-3585 JRNL PMID 17886275 JRNL DOI 10.1002/PROT.21678 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 52917 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.044 REMARK 3 FREE R VALUE TEST SET COUNT : 2669 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.75 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2762 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 71.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.2220 REMARK 3 BIN FREE R VALUE SET COUNT : 130 REMARK 3 BIN FREE R VALUE : 0.2620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3853 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 53 REMARK 3 SOLVENT ATOMS : 633 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.09800 REMARK 3 B22 (A**2) : 1.63300 REMARK 3 B33 (A**2) : -1.53500 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.117 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.115 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.075 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.208 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4223 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5795 ; 1.392 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 553 ; 5.608 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 209 ;34.949 ;23.397 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 695 ;13.121 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 39 ;13.478 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 629 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3309 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2092 ; 0.198 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2909 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 524 ; 0.141 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 62 ; 0.179 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 36 ; 0.168 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2595 ; 1.277 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4127 ; 2.096 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1886 ; 3.331 ; 6.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1635 ; 4.643 ; 8.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS, SELENIUM C COEFFICIENT FOR STRUCTURE FACTOR REMARK 3 CALCULATION SET TO -9.00, MOLPROBITY USED TO ASSIST IN FINAL REMARK 3 MODEL BUILDING. REMARK 4 REMARK 4 2EXR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-NOV-05. REMARK 100 THE DEPOSITION ID IS D_1000035222. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-05; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; NULL REMARK 200 RADIATION SOURCE : APS; NULL REMARK 200 BEAMLINE : 22-ID; NULL REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97911, 0.96403; NULL REMARK 200 MONOCHROMATOR : CRYOGENICALLY COOLED SI (220) REMARK 200 DOUBLE BOUNCE; NULL REMARK 200 OPTICS : HORIZONTAL SAGITALLY FOCUSING REMARK 200 2ND BENT MONOCHROMATOR CRYSTAL, REMARK 200 VERTICAL BENT FOCUSING MIRROR; REMARK 200 NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52961 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 42.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.7090 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.23200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.373 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP, DM 5.0, PHENIX, SHELXD, SOLOMON REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION (10 MG/ML PROTEIN, REMARK 280 0.10 M BIS TRIS, 0.050 M SODIUM CHLORIDE, 0.0031 M SODIUM AZIDE, REMARK 280 0.0003 M TCEP, PH 7.0) MIXED IN A 1:1 RATIO WITH THE WELL REMARK 280 SOLUTION (24% MEPEG 5K, 0.05 M MAGNESIUM SULFATE, 0.1 M HEPPS PH REMARK 280 8.5),TEMPERATURE 277K, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 95.46000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 95.46000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 22.92900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.25100 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 22.92900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.25100 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 95.46000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 22.92900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 57.25100 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 95.46000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 22.92900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 57.25100 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 ILE A 2 REMARK 465 ALA A 3 REMARK 465 TYR A 4 REMARK 465 ILE A 5 REMARK 465 GLU A 6 REMARK 465 PRO A 7 REMARK 465 TYR A 8 REMARK 465 PHE A 9 REMARK 465 LEU A 10 REMARK 465 GLU A 11 REMARK 465 ASN A 12 REMARK 465 ASP A 13 REMARK 465 ALA A 14 REMARK 465 GLU A 15 REMARK 465 ALA A 16 REMARK 465 ALA A 17 REMARK 465 SER A 18 REMARK 465 ALA A 19 REMARK 465 ALA A 20 REMARK 465 THR A 21 REMARK 465 ALA A 22 REMARK 465 ALA A 23 REMARK 465 GLY A 24 REMARK 465 LYS A 25 REMARK 465 SER A 26 REMARK 465 THR A 27 REMARK 465 ASP A 28 REMARK 465 GLY A 29 REMARK 465 VAL A 30 REMARK 465 SER A 31 REMARK 465 GLU A 32 REMARK 465 SER A 33 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN A 328 O HOH A 1104 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 120 85.99 -163.07 REMARK 500 ASP A 129 -106.32 62.32 REMARK 500 ASN A 174 -74.06 -121.03 REMARK 500 ALA A 175 -54.47 -168.81 REMARK 500 SER A 207 -174.92 -170.54 REMARK 500 SER A 270 -149.17 -129.61 REMARK 500 SER A 270 -142.68 -135.53 REMARK 500 LEU A 348 53.90 -119.46 REMARK 500 GLU A 402 -68.08 -130.29 REMARK 500 ASP A 508 61.58 -152.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 525 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GO.29544 RELATED DB: TARGETDB DBREF 2EXR A 2 524 UNP Q9FUJ1 CKX7_ARATH 2 524 SEQADV 2EXR SER A 1 UNP Q9FUJ1 CLONING ARTIFACT SEQADV 2EXR MSE A 57 UNP Q9FUJ1 MET 57 MODIFIED RESIDUE SEQADV 2EXR MSE A 103 UNP Q9FUJ1 MET 103 MODIFIED RESIDUE SEQADV 2EXR MSE A 112 UNP Q9FUJ1 MET 112 MODIFIED RESIDUE SEQADV 2EXR MSE A 241 UNP Q9FUJ1 MET 241 MODIFIED RESIDUE SEQADV 2EXR MSE A 412 UNP Q9FUJ1 MET 412 MODIFIED RESIDUE SEQADV 2EXR MSE A 458 UNP Q9FUJ1 MET 458 MODIFIED RESIDUE SEQADV 2EXR MSE A 506 UNP Q9FUJ1 MET 506 MODIFIED RESIDUE SEQADV 2EXR MSE A 510 UNP Q9FUJ1 MET 510 MODIFIED RESIDUE SEQRES 1 A 524 SER ILE ALA TYR ILE GLU PRO TYR PHE LEU GLU ASN ASP SEQRES 2 A 524 ALA GLU ALA ALA SER ALA ALA THR ALA ALA GLY LYS SER SEQRES 3 A 524 THR ASP GLY VAL SER GLU SER LEU ASN ILE GLN GLY GLU SEQRES 4 A 524 ILE LEU CYS GLY GLY ALA ALA ALA ASP ILE ALA GLY ARG SEQRES 5 A 524 ASP PHE GLY GLY MSE ASN CYS VAL LYS PRO LEU ALA VAL SEQRES 6 A 524 VAL ARG PRO VAL GLY PRO GLU ASP ILE ALA GLY ALA VAL SEQRES 7 A 524 LYS ALA ALA LEU ARG SER ASP LYS LEU THR VAL ALA ALA SEQRES 8 A 524 ARG GLY ASN GLY HIS SER ILE ASN GLY GLN ALA MSE ALA SEQRES 9 A 524 GLU GLY GLY LEU VAL VAL ASP MSE SER THR THR ALA GLU SEQRES 10 A 524 ASN HIS PHE GLU VAL GLY TYR LEU SER GLY GLY ASP ALA SEQRES 11 A 524 THR ALA PHE VAL ASP VAL SER GLY GLY ALA LEU TRP GLU SEQRES 12 A 524 ASP VAL LEU LYS ARG CYS VAL SER GLU TYR GLY LEU ALA SEQRES 13 A 524 PRO ARG SER TRP THR ASP TYR LEU GLY LEU THR VAL GLY SEQRES 14 A 524 GLY THR LEU SER ASN ALA GLY VAL SER GLY GLN ALA PHE SEQRES 15 A 524 ARG TYR GLY PRO GLN THR SER ASN VAL THR GLU LEU ASP SEQRES 16 A 524 VAL VAL THR GLY ASN GLY ASP VAL VAL THR CYS SER GLU SEQRES 17 A 524 ILE GLU ASN SER GLU LEU PHE PHE SER VAL LEU GLY GLY SEQRES 18 A 524 LEU GLY GLN PHE GLY ILE ILE THR ARG ALA ARG VAL LEU SEQRES 19 A 524 LEU GLN PRO ALA PRO ASP MSE VAL ARG TRP ILE ARG VAL SEQRES 20 A 524 VAL TYR THR GLU PHE ASP GLU PHE THR GLN ASP ALA GLU SEQRES 21 A 524 TRP LEU VAL SER GLN LYS ASN GLU SER SER PHE ASP TYR SEQRES 22 A 524 VAL GLU GLY PHE VAL PHE VAL ASN GLY ALA ASP PRO VAL SEQRES 23 A 524 ASN GLY TRP PRO THR VAL PRO LEU HIS PRO ASP HIS GLU SEQRES 24 A 524 PHE ASP PRO THR ARG LEU PRO GLN SER CYS GLY SER VAL SEQRES 25 A 524 LEU TYR CYS LEU GLU LEU GLY LEU HIS TYR ARG ASP SER SEQRES 26 A 524 ASP SER ASN SER THR ILE ASP LYS ARG VAL GLU ARG LEU SEQRES 27 A 524 ILE GLY ARG LEU ARG PHE ASN GLU GLY LEU ARG PHE GLU SEQRES 28 A 524 VAL ASP LEU PRO TYR VAL ASP PHE LEU LEU ARG VAL LYS SEQRES 29 A 524 ARG SER GLU GLU ILE ALA LYS GLU ASN GLY THR TRP GLU SEQRES 30 A 524 THR PRO HIS PRO TRP LEU ASN LEU PHE VAL SER LYS ARG SEQRES 31 A 524 ASP ILE GLY ASP PHE ASN ARG THR VAL PHE LYS GLU LEU SEQRES 32 A 524 VAL LYS ASN GLY VAL ASN GLY PRO MSE LEU VAL TYR PRO SEQRES 33 A 524 LEU LEU ARG SER ARG TRP ASP ASP ARG THR SER VAL VAL SEQRES 34 A 524 ILE PRO GLU GLU GLY GLU ILE PHE TYR ILE VAL ALA LEU SEQRES 35 A 524 LEU ARG PHE VAL PRO PRO CYS ALA LYS VAL SER SER VAL SEQRES 36 A 524 GLU LYS MSE VAL ALA GLN ASN GLN GLU ILE VAL HIS TRP SEQRES 37 A 524 CYS VAL LYS ASN GLY ILE ASP TYR LYS LEU TYR LEU PRO SEQRES 38 A 524 HIS TYR LYS SER GLN GLU GLU TRP ILE ARG HIS PHE GLY SEQRES 39 A 524 ASN ARG TRP SER ARG PHE VAL ASP ARG LYS ALA MSE PHE SEQRES 40 A 524 ASP PRO MSE ALA ILE LEU SER PRO GLY GLN LYS ILE PHE SEQRES 41 A 524 ASN ARG SER LEU MODRES 2EXR MSE A 57 MET SELENOMETHIONINE MODRES 2EXR MSE A 103 MET SELENOMETHIONINE MODRES 2EXR MSE A 112 MET SELENOMETHIONINE MODRES 2EXR MSE A 241 MET SELENOMETHIONINE MODRES 2EXR MSE A 412 MET SELENOMETHIONINE MODRES 2EXR MSE A 458 MET SELENOMETHIONINE MODRES 2EXR MSE A 506 MET SELENOMETHIONINE MODRES 2EXR MSE A 510 MET SELENOMETHIONINE HET MSE A 57 8 HET MSE A 103 8 HET MSE A 112 8 HET MSE A 241 8 HET MSE A 412 8 HET MSE A 458 8 HET MSE A 506 8 HET MSE A 510 13 HET FAD A 525 53 HETNAM MSE SELENOMETHIONINE HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 HOH *633(H2 O) HELIX 1 1 GLY A 43 GLY A 51 1 9 HELIX 2 2 GLY A 70 SER A 84 1 15 HELIX 3 3 SER A 113 ALA A 116 5 4 HELIX 4 4 LEU A 141 GLY A 154 1 14 HELIX 5 5 THR A 167 SER A 173 1 7 HELIX 6 6 GLN A 180 GLY A 185 1 6 HELIX 7 7 PRO A 186 SER A 189 5 4 HELIX 8 8 ASN A 211 LEU A 219 1 9 HELIX 9 9 GLU A 251 SER A 264 1 14 HELIX 10 10 GLY A 288 VAL A 292 5 5 HELIX 11 11 ASP A 301 LEU A 305 5 5 HELIX 12 12 SER A 327 GLY A 340 1 14 HELIX 13 13 TYR A 356 LEU A 361 1 6 HELIX 14 14 VAL A 363 ASN A 373 1 11 HELIX 15 15 LYS A 389 VAL A 399 1 11 HELIX 16 16 SER A 420 TRP A 422 5 3 HELIX 17 17 LYS A 451 ASN A 472 1 22 HELIX 18 18 SER A 485 GLY A 494 1 10 HELIX 19 19 ARG A 496 ASP A 508 1 13 HELIX 20 20 SER A 514 LYS A 518 5 5 SHEET 1 A 4 GLU A 39 LEU A 41 0 SHEET 2 A 4 ALA A 64 ARG A 67 -1 O ARG A 67 N GLU A 39 SHEET 3 A 4 LEU A 108 ASP A 111 1 O VAL A 109 N VAL A 66 SHEET 4 A 4 VAL A 89 ARG A 92 1 N ARG A 92 O VAL A 110 SHEET 1 B 4 PHE A 120 TYR A 124 0 SHEET 2 B 4 ALA A 132 SER A 137 -1 O ASP A 135 N GLU A 121 SHEET 3 B 4 GLY A 226 PRO A 237 -1 O VAL A 233 N VAL A 134 SHEET 4 B 4 LEU A 155 ALA A 156 -1 N ALA A 156 O GLN A 236 SHEET 1 C 5 PHE A 120 TYR A 124 0 SHEET 2 C 5 ALA A 132 SER A 137 -1 O ASP A 135 N GLU A 121 SHEET 3 C 5 GLY A 226 PRO A 237 -1 O VAL A 233 N VAL A 134 SHEET 4 C 5 VAL A 191 THR A 198 -1 N VAL A 197 O ILE A 227 SHEET 5 C 5 VAL A 203 SER A 207 -1 O VAL A 204 N VAL A 196 SHEET 1 D 8 ARG A 349 PRO A 355 0 SHEET 2 D 8 MSE A 241 TYR A 249 -1 N ARG A 246 O PHE A 350 SHEET 3 D 8 VAL A 312 TYR A 322 -1 O LEU A 316 N VAL A 247 SHEET 4 D 8 TYR A 273 VAL A 280 -1 N PHE A 279 O LEU A 313 SHEET 5 D 8 MSE A 412 LEU A 418 -1 O MSE A 412 N VAL A 278 SHEET 6 D 8 ILE A 436 LEU A 442 -1 O PHE A 437 N LEU A 417 SHEET 7 D 8 LEU A 383 SER A 388 -1 N VAL A 387 O TYR A 438 SHEET 8 D 8 TYR A 476 LEU A 478 -1 O LYS A 477 N PHE A 386 LINK C GLY A 56 N MSE A 57 1555 1555 1.33 LINK C MSE A 57 N ASN A 58 1555 1555 1.32 LINK ND1 HIS A 96 C8M FAD A 525 1555 1555 1.39 LINK C ALA A 102 N MSE A 103 1555 1555 1.33 LINK C MSE A 103 N ALA A 104 1555 1555 1.34 LINK C ASP A 111 N MSE A 112 1555 1555 1.32 LINK C MSE A 112 N SER A 113 1555 1555 1.33 LINK C ASP A 240 N MSE A 241 1555 1555 1.33 LINK C MSE A 241 N VAL A 242 1555 1555 1.33 LINK C PRO A 411 N MSE A 412 1555 1555 1.34 LINK C MSE A 412 N LEU A 413 1555 1555 1.33 LINK C LYS A 457 N MSE A 458 1555 1555 1.33 LINK C MSE A 458 N VAL A 459 1555 1555 1.33 LINK C ALA A 505 N MSE A 506 1555 1555 1.33 LINK C MSE A 506 N PHE A 507 1555 1555 1.33 LINK C PRO A 509 N MSE A 510 1555 1555 1.33 LINK C MSE A 510 N ALA A 511 1555 1555 1.34 SITE 1 AC1 32 PHE A 54 ALA A 91 GLY A 93 ASN A 94 SITE 2 AC1 32 GLY A 95 HIS A 96 SER A 97 GLN A 101 SITE 3 AC1 32 ALA A 102 THR A 161 ASP A 162 TYR A 163 SITE 4 AC1 32 LEU A 166 THR A 167 GLY A 169 GLY A 170 SITE 5 AC1 32 SER A 173 ASN A 174 GLY A 176 VAL A 177 SITE 6 AC1 32 GLY A 223 GLY A 226 ILE A 227 ILE A 228 SITE 7 AC1 32 TRP A 382 TYR A 479 SER A 514 GLN A 517 SITE 8 AC1 32 HOH A 552 HOH A 571 HOH A 573 HOH A 672 CRYST1 45.858 114.502 190.920 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021810 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008730 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005240 0.00000