HEADER IMMUNOGLOBULIN 27-MAY-92 2F19 TITLE THREE-DIMENSIONAL STRUCTURE OF TWO CRYSTAL FORMS OF FAB TITLE 2 R19.9, FROM A MONOCLONAL ANTI-ARSONATE ANTIBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: IGG2B-KAPPA R19.9 FAB (LIGHT CHAIN); COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: IGG2B-KAPPA R19.9 FAB (HEAVY CHAIN); COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 7 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 8 ORGANISM_TAXID: 10090 KEYWDS IMMUNOGLOBULIN EXPDTA X-RAY DIFFRACTION AUTHOR M.B.LASCOMBE,P.M.ALZARI,R.J.POLJAK,A.NISONOFF REVDAT 4 25-AUG-09 2F19 1 SOURCE REVDAT 3 24-FEB-09 2F19 1 VERSN REVDAT 2 01-APR-03 2F19 1 JRNL REVDAT 1 15-OCT-92 2F19 0 SPRSDE 15-OCT-92 2F19 1F19 JRNL AUTH M.-B.LASCOMBE,P.M.ALZARI,R.J.POLJAK,A.NISONOFF JRNL TITL THREE-DIMENSIONAL STRUCTURE OF TWO CRYSTAL FORMS OF JRNL TITL 2 FABR19.9 FROM A MONOCLONAL ANTI-ARSONATE ANTIBODY. JRNL REF PROC.NATL.ACAD.SCI.USA V. 89 9429 1992 JRNL REFN ISSN 0027-8424 JRNL PMID 1409652 JRNL DOI 10.1073/PNAS.89.20.9429 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.B.LASCOMBE,P.M.ALZARI,G.BOULOT,P.SALUDJIAN, REMARK 1 AUTH 2 P.TOUGARD,C.BEREK,S.HABA,E.M.ROSEN,A.NISONOFF, REMARK 1 AUTH 3 R.J.POLJAK REMARK 1 TITL THREE-DIMENSIONAL STRUCTURE OF FAB R19.9, A REMARK 1 TITL 2 MONOCLONAL MURINE ANTIBODY SPECIFIC FOR THE REMARK 1 TITL 3 P-AZOBENZENEARSONATE GROUP REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 86 607 1989 REMARK 1 REFN ISSN 0027-8424 REMARK 1 REFERENCE 2 REMARK 1 AUTH R.A.MARIUZZA,A.G.AMIT,G.BOULOT,P.SALUDJIAN, REMARK 1 AUTH 2 F.A.SAUL,P.TOUGARD,R.J.POLJAK,J.CONGER,E.LAMOYI, REMARK 1 AUTH 3 A.NISONOFF REMARK 1 TITL CRYSTALLIZATION OF THE FAB FRAGMENTS OF MONOCLONAL REMARK 1 TITL 2 ANTI-P-AZOPHENYLARSONATE ANTIBODIES AND THEIR REMARK 1 TITL 3 COMPLEXES WITH HAPTENS REMARK 1 REF J.BIOL.CHEM. V. 259 5954 1984 REMARK 1 REFN ISSN 0021-9258 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3320 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.014 REMARK 3 BOND ANGLES (DEGREES) : 3.40 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THE POSITIONS OF MANY LOOPS IN THE CONSTANT REGION AND OF REMARK 3 THE THIRD COMPLEMENTARITY-DETERMINING REGION OF THE HEAVY REMARK 3 CHAIN (RESIDUES H 101 - H 109) ARE SOMEWHAT ARBITRARY, AS REMARK 3 INDICATED BY LARGE TEMPERATURE FACTORS. REMARK 4 REMARK 4 2F19 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 40.40000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS L 55 NE2 HIS L 55 CD2 -0.071 REMARK 500 HIS L 80 NE2 HIS L 80 CD2 -0.069 REMARK 500 HIS L 189 NE2 HIS L 189 CD2 -0.069 REMARK 500 HIS L 198 NE2 HIS L 198 CD2 -0.069 REMARK 500 HIS H 210 NE2 HIS H 210 CD2 -0.071 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL L 19 CB - CA - C ANGL. DEV. = -11.5 DEGREES REMARK 500 ARG L 24 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 TRP L 35 CD1 - CG - CD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 TRP L 35 CE2 - CD2 - CG ANGL. DEV. = -5.8 DEGREES REMARK 500 ASP L 41 CA - C - N ANGL. DEV. = -12.5 DEGREES REMARK 500 LEU L 46 CA - CB - CG ANGL. DEV. = 14.0 DEGREES REMARK 500 THR L 51 CA - CB - CG2 ANGL. DEV. = 9.3 DEGREES REMARK 500 ARG L 53 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ILE L 83 CA - C - N ANGL. DEV. = -13.9 DEGREES REMARK 500 ARG L 96 NE - CZ - NH1 ANGL. DEV. = 7.0 DEGREES REMARK 500 ARG L 96 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG L 108 NE - CZ - NH1 ANGL. DEV. = 4.8 DEGREES REMARK 500 TRP L 148 CD1 - CG - CD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 TRP L 148 CE2 - CD2 - CG ANGL. DEV. = -5.7 DEGREES REMARK 500 ARG L 155 NE - CZ - NH1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG L 155 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 TRP L 163 CD1 - CG - CD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 TRP L 163 CE2 - CD2 - CG ANGL. DEV. = -5.8 DEGREES REMARK 500 ASN L 212 CA - C - N ANGL. DEV. = -15.5 DEGREES REMARK 500 ARG H 13 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 CYS H 22 CA - CB - SG ANGL. DEV. = 8.6 DEGREES REMARK 500 TRP H 36 CD1 - CG - CD2 ANGL. DEV. = 5.2 DEGREES REMARK 500 TRP H 36 CE2 - CD2 - CG ANGL. DEV. = -5.7 DEGREES REMARK 500 LEU H 45 CA - CB - CG ANGL. DEV. = 13.9 DEGREES REMARK 500 TRP H 47 CD1 - CG - CD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 TRP H 47 CE2 - CD2 - CG ANGL. DEV. = -5.3 DEGREES REMARK 500 VAL H 72 CA - CB - CG2 ANGL. DEV. = -10.5 DEGREES REMARK 500 ARG H 74 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG H 84 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG H 84 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG H 98 CB - CG - CD ANGL. DEV. = -16.1 DEGREES REMARK 500 VAL H 108 CA - CB - CG1 ANGL. DEV. = -11.9 DEGREES REMARK 500 TYR H 110 CA - CB - CG ANGL. DEV. = 11.6 DEGREES REMARK 500 TRP H 114 CE2 - CD2 - CG ANGL. DEV. = -5.2 DEGREES REMARK 500 TYR H 156 CB - CG - CD2 ANGL. DEV. = -4.2 DEGREES REMARK 500 TRP H 165 CD1 - CG - CD2 ANGL. DEV. = 7.1 DEGREES REMARK 500 TRP H 165 CE2 - CD2 - CG ANGL. DEV. = -5.8 DEGREES REMARK 500 LEU H 180 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 LEU H 181 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 TRP H 199 CD1 - CG - CD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 TRP H 199 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 THR H 215 CA - CB - CG2 ANGL. DEV. = 8.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU L 15 155.65 -49.73 REMARK 500 ASP L 28 107.48 -34.05 REMARK 500 SER L 30 46.49 33.20 REMARK 500 ASP L 41 91.97 44.54 REMARK 500 THR L 51 -56.19 72.36 REMARK 500 SER L 60 4.27 -69.22 REMARK 500 ASN L 77 73.14 50.78 REMARK 500 LEU L 78 106.34 -53.32 REMARK 500 SER L 127 33.05 -75.08 REMARK 500 PRO L 141 174.60 -54.76 REMARK 500 ASN L 157 66.24 86.15 REMARK 500 THR L 180 98.99 50.66 REMARK 500 HIS L 189 120.64 70.14 REMARK 500 GLU L 213 -10.66 -158.17 REMARK 500 VAL H 2 111.70 35.84 REMARK 500 ALA H 14 154.52 -48.07 REMARK 500 SER H 16 -144.17 -75.55 REMARK 500 LYS H 55 179.90 49.30 REMARK 500 TYR H 57 -116.09 -122.86 REMARK 500 PHE H 100 156.00 -48.15 REMARK 500 SER H 104 134.96 139.92 REMARK 500 ASP H 105 -59.33 168.62 REMARK 500 ALA H 107 -159.96 -48.45 REMARK 500 VAL H 108 -24.16 96.49 REMARK 500 TYR H 110 130.01 162.34 REMARK 500 SER H 124 71.12 -118.99 REMARK 500 PRO H 137 140.25 -30.16 REMARK 500 THR H 142 72.45 -54.76 REMARK 500 THR H 143 79.58 35.69 REMARK 500 SER H 167 53.76 29.47 REMARK 500 SER H 169 -50.35 -169.75 REMARK 500 SER H 173 13.43 56.21 REMARK 500 PRO H 178 134.79 -38.38 REMARK 500 GLN H 182 -120.43 -86.11 REMARK 500 ALA H 184 -40.78 82.55 REMARK 500 SER H 197 10.83 88.01 REMARK 500 GLN H 202 -13.75 57.43 REMARK 500 THR H 203 113.71 56.18 REMARK 500 THR H 216 98.65 -161.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER L 203 PRO L 204 148.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR L 36 0.07 SIDE_CHAIN REMARK 500 TYR L 50 0.07 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (11X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 THR L 180 24.9 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FAI RELATED DB: PDB REMARK 900 CRYSTAL FORM II DBREF 2F19 L 109 214 UNP P01837 KAC_MOUSE 1 106 DBREF 2F19 H 1 221 PDB 2F19 2F19 1 221 SEQRES 1 L 214 ASP ILE GLN MET THR GLN THR THR SER SER LEU SER ALA SEQRES 2 L 214 SER LEU GLY ASP ARG VAL THR ILE SER CYS ARG ALA SER SEQRES 3 L 214 GLN ASP ILE SER ASN TYR LEU ASN TRP TYR GLN GLN LYS SEQRES 4 L 214 PRO ASP GLY THR VAL LYS LEU LEU ILE TYR TYR THR SER SEQRES 5 L 214 ARG LEU HIS SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR ASP TYR SER LEU THR ILE SER ASN LEU SEQRES 7 L 214 GLU HIS GLU ASP ILE ALA THR TYR PHE CYS GLN GLN GLY SEQRES 8 L 214 SER THR LEU PRO ARG THR PHE GLY GLY GLY THR LYS LEU SEQRES 9 L 214 GLU ILE LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE SEQRES 10 L 214 PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SEQRES 11 L 214 SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP SEQRES 12 L 214 ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN SEQRES 13 L 214 ASN GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER MET SER SER THR LEU THR LEU THR SEQRES 15 L 214 LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU SEQRES 16 L 214 ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER SEQRES 17 L 214 PHE ASN ARG ASN GLU CYS SEQRES 1 H 221 GLN VAL GLN LEU GLN GLN SER GLY ALA GLU LEU VAL ARG SEQRES 2 H 221 ALA GLY SER SER VAL LYS MET SER CYS LYS ALA SER GLY SEQRES 3 H 221 TYR THR PHE THR SER TYR GLY VAL ASN TRP VAL LYS GLN SEQRES 4 H 221 ARG PRO GLY GLN GLY LEU GLU TRP ILE GLY TYR ILE ASN SEQRES 5 H 221 PRO GLY LYS GLY TYR LEU SER TYR ASN GLU LYS PHE LYS SEQRES 6 H 221 GLY LYS THR THR LEU THR VAL ASP ARG SER SER SER THR SEQRES 7 H 221 ALA TYR MET GLN LEU ARG SER LEU THR SER GLU ASP ALA SEQRES 8 H 221 ALA VAL TYR PHE CYS ALA ARG SER PHE TYR GLY GLY SER SEQRES 9 H 221 ASP LEU ALA VAL TYR TYR PHE ASP SER TRP GLY GLN GLY SEQRES 10 H 221 THR THR LEU THR VAL SER SER ALA LYS THR THR PRO PRO SEQRES 11 H 221 SER VAL TYR PRO LEU ALA PRO GLY CYS GLY ASP THR THR SEQRES 12 H 221 GLY SER SER VAL THR LEU GLY CYS LEU VAL LYS GLY TYR SEQRES 13 H 221 PHE PRO GLU SER VAL THR VAL THR TRP ASN SER GLY SER SEQRES 14 H 221 LEU SER SER SER VAL HIS THR PHE PRO ALA LEU LEU GLN SEQRES 15 H 221 SER ALA LEU TYR THR MET SER SER SER VAL THR VAL PRO SEQRES 16 H 221 SER SER THR TRP PRO SER GLN THR VAL THR CYS SER VAL SEQRES 17 H 221 ALA HIS PRO ALA SER SER THR THR VAL ASP LYS LYS LEU HELIX 1 1 GLU L 79 ILE L 83 5 5 HELIX 2 2 SER L 121 SER L 127 1 7 HELIX 3 3 LYS L 183 ARG L 188 1 6 HELIX 4 4 THR H 28 TYR H 32 5 5 HELIX 5 5 THR H 87 ALA H 91 5 5 SHEET 1 A 4 MET L 4 GLN L 6 0 SHEET 2 A 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 A 4 ASP L 70 ILE L 75 -1 O TYR L 71 N CYS L 23 SHEET 4 A 4 PHE L 62 SER L 67 -1 O SER L 63 N THR L 74 SHEET 1 B 5 ARG L 53 LEU L 54 0 SHEET 2 B 5 VAL L 44 TYR L 49 -1 N TYR L 49 O ARG L 53 SHEET 3 B 5 LEU L 33 GLN L 38 -1 N TRP L 35 O ILE L 48 SHEET 4 B 5 THR L 85 GLN L 90 -1 O THR L 85 N GLN L 38 SHEET 5 B 5 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 C 6 ARG L 53 LEU L 54 0 SHEET 2 C 6 VAL L 44 TYR L 49 -1 N TYR L 49 O ARG L 53 SHEET 3 C 6 LEU L 33 GLN L 38 -1 N TRP L 35 O ILE L 48 SHEET 4 C 6 THR L 85 GLN L 90 -1 O THR L 85 N GLN L 38 SHEET 5 C 6 THR L 102 ILE L 106 -1 O THR L 102 N TYR L 86 SHEET 6 C 6 SER L 10 ALA L 13 1 N LEU L 11 O LYS L 103 SHEET 1 D 4 THR L 114 PHE L 118 0 SHEET 2 D 4 VAL L 133 PHE L 139 -1 O VAL L 133 N PHE L 118 SHEET 3 D 4 TYR L 173 THR L 178 -1 O TYR L 173 N PHE L 139 SHEET 4 D 4 ASN L 161 TRP L 163 -1 O SER L 162 N SER L 176 SHEET 1 E 2 GLY L 129 ALA L 130 0 SHEET 2 E 2 LEU L 181 THR L 182 -1 N LEU L 181 O ALA L 130 SHEET 1 F 4 SER L 153 GLU L 154 0 SHEET 2 F 4 ILE L 144 ILE L 150 -1 N ILE L 150 O SER L 153 SHEET 3 F 4 SER L 191 HIS L 198 -1 N THR L 193 O LYS L 149 SHEET 4 F 4 ILE L 205 ASN L 210 -1 N ILE L 205 O ALA L 196 SHEET 1 G 4 GLN H 3 GLN H 6 0 SHEET 2 G 4 SER H 17 SER H 25 -1 O LYS H 23 N GLN H 5 SHEET 3 G 4 THR H 78 ARG H 84 -1 O ALA H 79 N CYS H 22 SHEET 4 G 4 THR H 68 ASP H 73 -1 N THR H 69 O GLN H 82 SHEET 1 H 5 LEU H 58 TYR H 60 0 SHEET 2 H 5 LEU H 45 ILE H 51 -1 N TYR H 50 O SER H 59 SHEET 3 H 5 GLY H 33 GLN H 39 -1 N VAL H 34 O ILE H 51 SHEET 4 H 5 ALA H 92 SER H 99 -1 O VAL H 93 N GLN H 39 SHEET 5 H 5 PHE H 111 TRP H 114 -1 N ASP H 112 O ARG H 98 SHEET 1 I 6 LEU H 58 TYR H 60 0 SHEET 2 I 6 LEU H 45 ILE H 51 -1 N TYR H 50 O SER H 59 SHEET 3 I 6 GLY H 33 GLN H 39 -1 N VAL H 34 O ILE H 51 SHEET 4 I 6 ALA H 92 SER H 99 -1 O VAL H 93 N GLN H 39 SHEET 5 I 6 THR H 118 VAL H 122 -1 N THR H 118 O TYR H 94 SHEET 6 I 6 GLU H 10 VAL H 12 1 O GLU H 10 N THR H 121 SHEET 1 J 4 SER H 131 LEU H 135 0 SHEET 2 J 4 SER H 146 TYR H 156 -1 N GLY H 150 O LEU H 135 SHEET 3 J 4 TYR H 186 PRO H 195 -1 N TYR H 186 O TYR H 156 SHEET 4 J 4 VAL H 174 THR H 176 -1 N HIS H 175 O SER H 191 SHEET 1 K 3 THR H 162 TRP H 165 0 SHEET 2 K 3 VAL H 204 ALA H 209 -1 N SER H 207 O THR H 164 SHEET 3 K 3 VAL H 217 LEU H 221 -1 N VAL H 217 O VAL H 208 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.02 SSBOND 2 CYS L 134 CYS L 194 1555 1555 2.01 SSBOND 3 CYS H 22 CYS H 96 1555 1555 2.02 SSBOND 4 CYS H 151 CYS H 206 1555 1555 2.01 SSBOND 5 CYS L 214 CYS H 139 1555 1555 2.03 CISPEP 1 LEU L 94 PRO L 95 0 -5.96 CISPEP 2 TYR L 140 PRO L 141 0 -19.08 CISPEP 3 PHE H 157 PRO H 158 0 -5.56 CISPEP 4 TRP H 199 PRO H 200 0 -11.50 CRYST1 43.300 80.800 75.100 90.00 96.00 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023095 0.000000 0.002427 0.00000 SCALE2 0.000000 0.012376 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013389 0.00000