HEADER GENE REGULATION 22-NOV-05 2F3X TITLE CRYSTAL STRUCTURE OF FAPR (IN COMPLEX WITH EFFECTOR)- A GLOBAL TITLE 2 REGULATOR OF FATTY ACID BIOSYNTHESIS IN B. SUBTILIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION FACTOR FAPR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: C-TEMINAL DOMAIN + LINKER ALPHA HELIX (RESIDUES 44-188); COMPND 5 SYNONYM: FATTY ACID AND PHOSPHOLIPID BIOSYNTHESIS REGULATOR; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: FAPR; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PQE30 KEYWDS 'HOT-DOG' FOLD - MALONYL-COA COMPLEX, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR A.BUSCHIAZZO,M.E.GUERIN,P.M.ALZARI REVDAT 3 14-FEB-24 2F3X 1 REMARK SEQADV REVDAT 2 24-FEB-09 2F3X 1 VERSN REVDAT 1 31-OCT-06 2F3X 0 JRNL AUTH G.E.SCHUJMAN,M.GUERIN,A.BUSCHIAZZO,F.SCHAEFFER,L.I.LLARRULL, JRNL AUTH 2 G.REH,A.J.VILA,P.M.ALZARI,D.DE MENDOZA JRNL TITL STRUCTURAL BASIS OF LIPID BIOSYNTHESIS REGULATION IN JRNL TITL 2 GRAM-POSITIVE BACTERIA. JRNL REF EMBO J. V. 25 4074 2006 JRNL REFN ISSN 0261-4189 JRNL PMID 16932747 JRNL DOI 10.1038/SJ.EMBOJ.7601284 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 63.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 12545 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.500 REMARK 3 FREE R VALUE TEST SET COUNT : 941 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.18 REMARK 3 REFLECTION IN BIN (WORKING SET) : 841 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2750 REMARK 3 BIN FREE R VALUE SET COUNT : 63 REMARK 3 BIN FREE R VALUE : 0.3550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2238 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 10 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.69000 REMARK 3 B22 (A**2) : 0.69000 REMARK 3 B33 (A**2) : -1.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.591 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.321 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.215 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 26.708 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2320 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2177 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3132 ; 2.137 ; 1.991 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5045 ; 0.945 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 284 ; 8.360 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 112 ;35.850 ;24.821 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 425 ;22.542 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;18.749 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 366 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2551 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 436 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 471 ; 0.234 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2374 ; 0.206 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1131 ; 0.191 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1629 ; 0.098 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 58 ; 0.146 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 15 ; 0.216 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 32 ; 0.218 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.102 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1460 ; 0.793 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 586 ; 0.117 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2286 ; 1.275 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 937 ; 1.934 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 846 ; 3.342 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2F3X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-DEC-05. REMARK 100 THE DEPOSITION ID IS D_1000035421. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : KHOZU MONOCHROMATOR WITH A REMARK 200 MCLENNON CONTROLLER CONTAINING A REMARK 200 LN2 COOLED SI111 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12596 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 63.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : 0.07900 REMARK 200 FOR THE DATA SET : 19.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.31000 REMARK 200 R SYM FOR SHELL (I) : 0.31000 REMARK 200 FOR SHELL : 6.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% ETHYLENGLYCOL, 5MM MALONYL-COA, PH REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.08300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 44.72050 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 44.72050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.54150 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 44.72050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 44.72050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 121.62450 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 44.72050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.72050 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 40.54150 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 44.72050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.72050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 121.62450 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 81.08300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY CORRESPONDS TO THE DIMER IN THE ASU REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 32 REMARK 465 ARG A 33 REMARK 465 GLY A 34 REMARK 465 SER A 35 REMARK 465 HIS A 36 REMARK 465 HIS A 37 REMARK 465 HIS A 38 REMARK 465 HIS A 39 REMARK 465 HIS A 40 REMARK 465 HIS A 41 REMARK 465 GLY A 42 REMARK 465 SER A 43 REMARK 465 HIS A 187 REMARK 465 SER A 188 REMARK 465 MET B 32 REMARK 465 ARG B 33 REMARK 465 GLY B 34 REMARK 465 SER B 35 REMARK 465 HIS B 36 REMARK 465 HIS B 37 REMARK 465 HIS B 38 REMARK 465 HIS B 39 REMARK 465 HIS B 40 REMARK 465 HIS B 41 REMARK 465 GLY B 42 REMARK 465 SER B 43 REMARK 465 HIS B 187 REMARK 465 SER B 188 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 53 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 151 CG CD CE NZ REMARK 470 LYS A 157 CG CD CE NZ REMARK 470 GLU A 158 CG CD OE1 OE2 REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 LYS B 159 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 77 CG GLU A 77 CD 0.116 REMARK 500 GLU A 172 CB GLU A 172 CG 0.122 REMARK 500 GLU A 172 CG GLU A 172 CD 0.104 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A 121 CB - CA - C ANGL. DEV. = -13.2 DEGREES REMARK 500 ARG A 138 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG A 138 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 VAL B 121 CB - CA - C ANGL. DEV. = -12.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 45 155.42 85.34 REMARK 500 ASP A 85 -79.81 -150.18 REMARK 500 ASN A 102 19.00 -152.16 REMARK 500 LYS A 159 41.13 35.12 REMARK 500 ARG A 184 -88.59 -141.46 REMARK 500 SER A 185 74.13 159.55 REMARK 500 ASP B 72 -49.88 -20.76 REMARK 500 ASP B 84 25.42 25.78 REMARK 500 ASP B 85 -76.05 -136.23 REMARK 500 ASP B 124 148.92 177.10 REMARK 500 ALA B 154 121.16 -179.23 REMARK 500 GLU B 156 60.08 -162.11 REMARK 500 GLU B 158 -88.68 -40.32 REMARK 500 LYS B 159 34.16 -73.55 REMARK 500 SER B 185 147.87 139.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 NUCLEOTIDIC PORTION OF MLC COULD NOT BE MODELED REMARK 600 DUE TO LACK OF ELECTRON DENSITY. REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 MLC A 391 REMARK 610 MLC B 390 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLC B 390 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLC A 391 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2F41 RELATED DB: PDB DBREF 2F3X A 44 188 UNP O34835 FAPR_BACSU 44 188 DBREF 2F3X B 44 188 UNP O34835 FAPR_BACSU 44 188 SEQADV 2F3X MET A 32 UNP O34835 CLONING ARTIFACT SEQADV 2F3X ARG A 33 UNP O34835 CLONING ARTIFACT SEQADV 2F3X GLY A 34 UNP O34835 CLONING ARTIFACT SEQADV 2F3X SER A 35 UNP O34835 CLONING ARTIFACT SEQADV 2F3X HIS A 36 UNP O34835 EXPRESSION TAG SEQADV 2F3X HIS A 37 UNP O34835 EXPRESSION TAG SEQADV 2F3X HIS A 38 UNP O34835 EXPRESSION TAG SEQADV 2F3X HIS A 39 UNP O34835 EXPRESSION TAG SEQADV 2F3X HIS A 40 UNP O34835 EXPRESSION TAG SEQADV 2F3X HIS A 41 UNP O34835 EXPRESSION TAG SEQADV 2F3X GLY A 42 UNP O34835 CLONING ARTIFACT SEQADV 2F3X SER A 43 UNP O34835 CLONING ARTIFACT SEQADV 2F3X MET B 32 UNP O34835 CLONING ARTIFACT SEQADV 2F3X ARG B 33 UNP O34835 CLONING ARTIFACT SEQADV 2F3X GLY B 34 UNP O34835 CLONING ARTIFACT SEQADV 2F3X SER B 35 UNP O34835 CLONING ARTIFACT SEQADV 2F3X HIS B 36 UNP O34835 EXPRESSION TAG SEQADV 2F3X HIS B 37 UNP O34835 EXPRESSION TAG SEQADV 2F3X HIS B 38 UNP O34835 EXPRESSION TAG SEQADV 2F3X HIS B 39 UNP O34835 EXPRESSION TAG SEQADV 2F3X HIS B 40 UNP O34835 EXPRESSION TAG SEQADV 2F3X HIS B 41 UNP O34835 EXPRESSION TAG SEQADV 2F3X GLY B 42 UNP O34835 CLONING ARTIFACT SEQADV 2F3X SER B 43 UNP O34835 CLONING ARTIFACT SEQRES 1 A 157 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER GLU SEQRES 2 A 157 LEU SER ILE PRO GLU LEU ARG GLU ARG ILE LYS ASN VAL SEQRES 3 A 157 ALA GLU LYS THR LEU GLU ASP GLU VAL LYS SER LEU SER SEQRES 4 A 157 LEU ASP GLU VAL ILE GLY GLU ILE ILE ASP LEU GLU LEU SEQRES 5 A 157 ASP ASP GLN ALA ILE SER ILE LEU GLU ILE LYS GLN GLU SEQRES 6 A 157 HIS VAL PHE SER ARG ASN GLN ILE ALA ARG GLY HIS HIS SEQRES 7 A 157 LEU PHE ALA GLN ALA ASN SER LEU ALA VAL ALA VAL ILE SEQRES 8 A 157 ASP ASP GLU LEU ALA LEU THR ALA SER ALA ASP ILE ARG SEQRES 9 A 157 PHE THR ARG GLN VAL LYS GLN GLY GLU ARG VAL VAL ALA SEQRES 10 A 157 LYS ALA LYS VAL THR ALA VAL GLU LYS GLU LYS GLY ARG SEQRES 11 A 157 THR VAL VAL GLU VAL ASN SER TYR VAL GLY GLU GLU ILE SEQRES 12 A 157 VAL PHE SER GLY ARG PHE ASP MET TYR ARG SER LYS HIS SEQRES 13 A 157 SER SEQRES 1 B 157 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER GLU SEQRES 2 B 157 LEU SER ILE PRO GLU LEU ARG GLU ARG ILE LYS ASN VAL SEQRES 3 B 157 ALA GLU LYS THR LEU GLU ASP GLU VAL LYS SER LEU SER SEQRES 4 B 157 LEU ASP GLU VAL ILE GLY GLU ILE ILE ASP LEU GLU LEU SEQRES 5 B 157 ASP ASP GLN ALA ILE SER ILE LEU GLU ILE LYS GLN GLU SEQRES 6 B 157 HIS VAL PHE SER ARG ASN GLN ILE ALA ARG GLY HIS HIS SEQRES 7 B 157 LEU PHE ALA GLN ALA ASN SER LEU ALA VAL ALA VAL ILE SEQRES 8 B 157 ASP ASP GLU LEU ALA LEU THR ALA SER ALA ASP ILE ARG SEQRES 9 B 157 PHE THR ARG GLN VAL LYS GLN GLY GLU ARG VAL VAL ALA SEQRES 10 B 157 LYS ALA LYS VAL THR ALA VAL GLU LYS GLU LYS GLY ARG SEQRES 11 B 157 THR VAL VAL GLU VAL ASN SER TYR VAL GLY GLU GLU ILE SEQRES 12 B 157 VAL PHE SER GLY ARG PHE ASP MET TYR ARG SER LYS HIS SEQRES 13 B 157 SER HET MLC A 391 32 HET MLC B 390 32 HETNAM MLC MALONYL-COENZYME A FORMUL 3 MLC 2(C24 H38 N7 O19 P3 S) FORMUL 5 HOH *10(H2 O) HELIX 1 1 SER A 46 ASP A 64 1 19 HELIX 2 2 SER A 70 VAL A 74 5 5 HELIX 3 3 LYS A 94 VAL A 98 5 5 HELIX 4 4 ARG A 106 VAL A 121 1 16 HELIX 5 5 LYS A 157 GLY A 160 5 4 HELIX 6 6 SER B 46 LEU B 62 1 17 HELIX 7 7 SER B 70 VAL B 74 5 5 HELIX 8 8 LYS B 94 VAL B 98 5 5 HELIX 9 9 ARG B 106 VAL B 121 1 16 SHEET 1 A12 GLU A 77 GLU A 82 0 SHEET 2 A12 GLN A 86 GLU A 92 -1 O GLN A 86 N GLU A 82 SHEET 3 A12 ARG A 145 GLU A 156 -1 O ALA A 150 N ALA A 87 SHEET 4 A12 ARG A 161 VAL A 170 -1 O VAL A 163 N ALA A 154 SHEET 5 A12 GLU A 173 TYR A 183 -1 O VAL A 175 N SER A 168 SHEET 6 A12 LEU A 128 PHE A 136 -1 N LEU A 128 O TYR A 183 SHEET 7 A12 ALA B 127 PHE B 136 -1 O PHE B 136 N ALA A 130 SHEET 8 A12 GLU B 173 ARG B 184 -1 O ASP B 181 N ALA B 130 SHEET 9 A12 ARG B 161 VAL B 170 -1 N SER B 168 O PHE B 176 SHEET 10 A12 ARG B 145 GLU B 156 -1 N ALA B 154 O VAL B 163 SHEET 11 A12 GLN B 86 GLU B 92 -1 N LEU B 91 O VAL B 146 SHEET 12 A12 GLU B 77 GLU B 82 -1 N GLU B 82 O GLN B 86 SITE 1 AC1 12 ASN A 115 VAL A 119 THR A 129 ARG A 161 SITE 2 AC1 12 PHE B 99 ALA B 105 ARG B 106 GLY B 107 SITE 3 AC1 12 PHE B 136 THR B 137 ARG B 138 GLN B 139 SITE 1 AC2 13 PHE A 99 ALA A 105 ARG A 106 GLY A 107 SITE 2 AC2 13 HIS A 108 PHE A 136 THR A 137 ARG A 138 SITE 3 AC2 13 GLN A 139 ASN B 115 VAL B 119 LEU B 128 SITE 4 AC2 13 THR B 129 CRYST1 89.441 89.441 162.166 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011181 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011181 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006167 0.00000