HEADER GENE REGULATION 30-NOV-05 2F7B TITLE CATM EFFECTOR BINDING DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HTH-TYPE TRANSCRIPTIONAL REGULATOR CATM; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CAT OPERON TRANSCRIPTIONAL REGULATOR; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAYLYI; SOURCE 3 ORGANISM_TAXID: 202950; SOURCE 4 STRAIN: ADP1; SOURCE 5 GENE: CATM, CATR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21B KEYWDS LTTR, LYSR-TYPE TRANSCRIPTIONAL REGULATOR, INDUCER BINDING DOMAIN, KEYWDS 2 EFFECTOR BINDING DOMAIN, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR T.CLARK,S.HADDAD,O.EZEZIKA,E.NEIDLE,C.MOMANY REVDAT 6 23-AUG-23 2F7B 1 REMARK SEQADV REVDAT 5 18-OCT-17 2F7B 1 REMARK REVDAT 4 13-JUL-11 2F7B 1 VERSN REVDAT 3 24-FEB-09 2F7B 1 VERSN REVDAT 2 20-MAR-07 2F7B 1 JRNL REVDAT 1 31-OCT-06 2F7B 0 JRNL AUTH O.C.EZEZIKA,S.HADDAD,T.J.CLARK,E.L.NEIDLE,C.MOMANY JRNL TITL DISTINCT EFFECTOR-BINDING SITES ENABLE SYNERGISTIC JRNL TITL 2 TRANSCRIPTIONAL ACTIVATION BY BENM, A LYSR-TYPE REGULATOR. JRNL REF J.MOL.BIOL. V. 367 616 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17291527 JRNL DOI 10.1016/J.JMB.2006.09.090 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.CLARK,S.HADDAD,E.NEIDLE,C.MOMANY REMARK 1 TITL CRYSTALLIZATION OF THE EFFECTOR-BINDING DOMAINS OF BENM AND REMARK 1 TITL 2 CATM, LYSR-TYPE TRANSCRIPTIONAL REGULATORS FROM REMARK 1 TITL 3 ACINETOBACTER SP. ADP1. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 60 105 2004 REMARK 1 REFN ISSN 0907-4449 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 60.75 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 3 NUMBER OF REFLECTIONS : 18410 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.186 REMARK 3 FREE R VALUE TEST SET COUNT : 1007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1371 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.49 REMARK 3 BIN R VALUE (WORKING SET) : 0.2090 REMARK 3 BIN FREE R VALUE SET COUNT : 63 REMARK 3 BIN FREE R VALUE : 0.2780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1688 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 359 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 20.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.29600 REMARK 3 B22 (A**2) : 0.68200 REMARK 3 B33 (A**2) : -0.97800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.154 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.159 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.125 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.879 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.914 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1754 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1781 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2387 ; 1.080 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4067 ; 0.727 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 217 ; 5.391 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 73 ;37.543 ;24.521 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 314 ;12.191 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;11.931 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 279 ; 0.059 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1925 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 375 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 311 ; 0.183 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1862 ; 0.157 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 801 ; 0.168 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1074 ; 0.077 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 253 ; 0.124 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.149 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 102 ; 0.215 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 27 ; 0.078 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1403 ; 0.778 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 432 ; 0.081 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1755 ; 1.170 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1468 ; 0.499 ; 5.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 755 ; 2.362 ; 7.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1538 ; 0.740 ; 7.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 630 ; 3.161 ;10.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2599 ; 1.312 ;10.000 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 90 A 112 REMARK 3 ORIGIN FOR THE GROUP (A): 50.7960 17.8830 55.6960 REMARK 3 T TENSOR REMARK 3 T11: -0.0416 T22: 0.0340 REMARK 3 T33: -0.0484 T12: 0.0031 REMARK 3 T13: 0.0170 T23: 0.0244 REMARK 3 L TENSOR REMARK 3 L11: 2.9727 L22: 3.0786 REMARK 3 L33: 2.8680 L12: -0.4633 REMARK 3 L13: -0.1863 L23: 1.4061 REMARK 3 S TENSOR REMARK 3 S11: -0.0611 S12: 0.0458 S13: -0.0361 REMARK 3 S21: -0.0047 S22: -0.0038 S23: 0.1243 REMARK 3 S31: -0.1851 S32: -0.0989 S33: 0.0650 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 113 A 120 REMARK 3 ORIGIN FOR THE GROUP (A): 40.0900 17.1990 50.7300 REMARK 3 T TENSOR REMARK 3 T11: -0.0773 T22: 0.2067 REMARK 3 T33: 0.0756 T12: -0.0002 REMARK 3 T13: -0.0596 T23: 0.0190 REMARK 3 L TENSOR REMARK 3 L11: 7.2183 L22: 17.3811 REMARK 3 L33: 8.6557 L12: 3.4069 REMARK 3 L13: -2.0658 L23: -4.4733 REMARK 3 S TENSOR REMARK 3 S11: -0.4214 S12: 0.3347 S13: 0.3727 REMARK 3 S21: -1.0185 S22: 0.4110 S23: 0.2282 REMARK 3 S31: -0.2376 S32: 0.0304 S33: 0.0105 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 121 A 148 REMARK 3 ORIGIN FOR THE GROUP (A): 52.9600 27.6440 61.7330 REMARK 3 T TENSOR REMARK 3 T11: 0.0119 T22: -0.0354 REMARK 3 T33: -0.0153 T12: 0.0132 REMARK 3 T13: 0.0073 T23: 0.0225 REMARK 3 L TENSOR REMARK 3 L11: 4.8257 L22: 1.4605 REMARK 3 L33: 1.9671 L12: -0.2011 REMARK 3 L13: -1.2802 L23: 0.7196 REMARK 3 S TENSOR REMARK 3 S11: -0.0287 S12: -0.0161 S13: 0.4274 REMARK 3 S21: 0.0606 S22: 0.0315 S23: -0.0434 REMARK 3 S31: -0.3242 S32: 0.0020 S33: -0.0028 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 149 A 156 REMARK 3 ORIGIN FOR THE GROUP (A): 50.8940 27.0650 72.2910 REMARK 3 T TENSOR REMARK 3 T11: 0.0206 T22: 0.0204 REMARK 3 T33: -0.0256 T12: 0.0083 REMARK 3 T13: 0.0458 T23: -0.0098 REMARK 3 L TENSOR REMARK 3 L11: 11.8036 L22: 5.5540 REMARK 3 L33: 8.6977 L12: 4.4321 REMARK 3 L13: 8.0417 L23: 1.4570 REMARK 3 S TENSOR REMARK 3 S11: -0.2120 S12: -0.2231 S13: -0.0300 REMARK 3 S21: 0.3762 S22: 0.0608 S23: -0.2257 REMARK 3 S31: -0.4974 S32: 0.2675 S33: 0.1512 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 157 A 163 REMARK 3 ORIGIN FOR THE GROUP (A): 55.5700 13.4870 69.3630 REMARK 3 T TENSOR REMARK 3 T11: 0.0023 T22: 0.0153 REMARK 3 T33: 0.0102 T12: -0.0042 REMARK 3 T13: 0.0360 T23: 0.0345 REMARK 3 L TENSOR REMARK 3 L11: 16.9209 L22: 6.7683 REMARK 3 L33: 4.6831 L12: -10.5499 REMARK 3 L13: -6.7254 L23: 4.8121 REMARK 3 S TENSOR REMARK 3 S11: -0.3005 S12: -0.2932 S13: -0.1059 REMARK 3 S21: 0.3319 S22: 0.2356 S23: -0.2159 REMARK 3 S31: -0.2842 S32: 0.1250 S33: 0.0649 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 164 A 175 REMARK 3 ORIGIN FOR THE GROUP (A): 78.9370 7.7730 62.2740 REMARK 3 T TENSOR REMARK 3 T11: -0.0355 T22: 0.0158 REMARK 3 T33: 0.0011 T12: 0.0118 REMARK 3 T13: -0.0674 T23: -0.0177 REMARK 3 L TENSOR REMARK 3 L11: 5.9591 L22: 4.9741 REMARK 3 L33: 3.8041 L12: -1.2712 REMARK 3 L13: -2.9261 L23: 0.7056 REMARK 3 S TENSOR REMARK 3 S11: 0.1611 S12: -0.1486 S13: -0.0547 REMARK 3 S21: 0.0651 S22: 0.1045 S23: -0.4852 REMARK 3 S31: 0.0982 S32: 0.2940 S33: -0.2656 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 176 A 188 REMARK 3 ORIGIN FOR THE GROUP (A): 78.9000 8.9820 71.4970 REMARK 3 T TENSOR REMARK 3 T11: -0.0097 T22: 0.0070 REMARK 3 T33: -0.0280 T12: -0.0081 REMARK 3 T13: -0.0687 T23: -0.0122 REMARK 3 L TENSOR REMARK 3 L11: 3.0921 L22: 14.7512 REMARK 3 L33: 2.9319 L12: 2.8266 REMARK 3 L13: 0.7595 L23: 5.8754 REMARK 3 S TENSOR REMARK 3 S11: -0.1213 S12: 0.0659 S13: -0.0309 REMARK 3 S21: 0.0715 S22: 0.1679 S23: -0.3020 REMARK 3 S31: 0.0154 S32: 0.3875 S33: -0.0466 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 189 A 199 REMARK 3 ORIGIN FOR THE GROUP (A): 74.5820 23.0650 63.1860 REMARK 3 T TENSOR REMARK 3 T11: 0.0091 T22: 0.0077 REMARK 3 T33: -0.0803 T12: -0.0708 REMARK 3 T13: -0.0281 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 17.0563 L22: 7.2752 REMARK 3 L33: 2.3570 L12: -5.7403 REMARK 3 L13: 1.5052 L23: -1.7669 REMARK 3 S TENSOR REMARK 3 S11: -0.2680 S12: -0.0877 S13: 0.0141 REMARK 3 S21: 0.4952 S22: 0.0736 S23: -0.1626 REMARK 3 S31: -0.3994 S32: 0.0673 S33: 0.1944 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 200 A 220 REMARK 3 ORIGIN FOR THE GROUP (A): 72.8370 22.8430 71.5800 REMARK 3 T TENSOR REMARK 3 T11: 0.0291 T22: 0.0134 REMARK 3 T33: 0.0226 T12: -0.0310 REMARK 3 T13: -0.0617 T23: -0.0460 REMARK 3 L TENSOR REMARK 3 L11: 4.6898 L22: 1.0235 REMARK 3 L33: 6.4807 L12: -1.9969 REMARK 3 L13: 2.6958 L23: -2.0720 REMARK 3 S TENSOR REMARK 3 S11: -0.1678 S12: -0.2909 S13: 0.2801 REMARK 3 S21: 0.1978 S22: 0.0181 S23: -0.0855 REMARK 3 S31: -0.5668 S32: -0.0237 S33: 0.1497 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 221 A 237 REMARK 3 ORIGIN FOR THE GROUP (A): 74.1560 20.4110 56.4810 REMARK 3 T TENSOR REMARK 3 T11: 0.0012 T22: 0.0514 REMARK 3 T33: -0.0253 T12: -0.0177 REMARK 3 T13: 0.0033 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 1.3895 L22: 5.2489 REMARK 3 L33: 1.1574 L12: 0.3878 REMARK 3 L13: 1.2399 L23: -0.1664 REMARK 3 S TENSOR REMARK 3 S11: 0.0204 S12: 0.0570 S13: 0.1087 REMARK 3 S21: -0.1198 S22: -0.0458 S23: -0.0946 REMARK 3 S31: -0.2101 S32: 0.0791 S33: 0.0254 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 238 A 250 REMARK 3 ORIGIN FOR THE GROUP (A): 70.6190 12.8960 60.4370 REMARK 3 T TENSOR REMARK 3 T11: -0.0076 T22: 0.0289 REMARK 3 T33: 0.0031 T12: 0.0002 REMARK 3 T13: 0.0011 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 6.5227 L22: 3.1940 REMARK 3 L33: 2.7306 L12: 2.9629 REMARK 3 L13: 2.2072 L23: 0.5818 REMARK 3 S TENSOR REMARK 3 S11: -0.0905 S12: 0.0864 S13: 0.1025 REMARK 3 S21: -0.1527 S22: 0.1465 S23: 0.0135 REMARK 3 S31: 0.1311 S32: 0.1040 S33: -0.0560 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 251 A 266 REMARK 3 ORIGIN FOR THE GROUP (A): 71.7870 8.9340 64.2370 REMARK 3 T TENSOR REMARK 3 T11: -0.0378 T22: 0.0331 REMARK 3 T33: -0.0010 T12: -0.0240 REMARK 3 T13: -0.0013 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 0.4466 L22: 1.0612 REMARK 3 L33: 8.6489 L12: -0.0589 REMARK 3 L13: -1.6397 L23: 0.4062 REMARK 3 S TENSOR REMARK 3 S11: -0.1062 S12: -0.0096 S13: -0.0217 REMARK 3 S21: 0.1431 S22: -0.1361 S23: -0.0008 REMARK 3 S31: 0.2055 S32: -0.2822 S33: 0.2422 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 267 A 289 REMARK 3 ORIGIN FOR THE GROUP (A): 44.1940 20.8370 64.9080 REMARK 3 T TENSOR REMARK 3 T11: -0.0553 T22: 0.0849 REMARK 3 T33: -0.0147 T12: 0.0443 REMARK 3 T13: 0.0705 T23: 0.0164 REMARK 3 L TENSOR REMARK 3 L11: 2.1528 L22: 4.4081 REMARK 3 L33: 2.0766 L12: -1.5742 REMARK 3 L13: 1.8265 L23: -0.0256 REMARK 3 S TENSOR REMARK 3 S11: -0.1283 S12: -0.3363 S13: -0.1773 REMARK 3 S21: 0.2095 S22: -0.0664 S23: 0.3179 REMARK 3 S31: -0.1590 S32: -0.3051 S33: 0.1947 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 290 A 303 REMARK 3 ORIGIN FOR THE GROUP (A): 48.8380 6.2370 65.7800 REMARK 3 T TENSOR REMARK 3 T11: -0.0193 T22: 0.0263 REMARK 3 T33: 0.0481 T12: -0.0056 REMARK 3 T13: 0.0586 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 6.2677 L22: 3.8434 REMARK 3 L33: 4.0470 L12: -0.7168 REMARK 3 L13: 4.8656 L23: -1.5640 REMARK 3 S TENSOR REMARK 3 S11: 0.0627 S12: -0.2817 S13: 0.1996 REMARK 3 S21: 0.4102 S22: -0.0251 S23: 0.4071 REMARK 3 S31: -0.1308 S32: -0.4761 S33: -0.0375 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2F7B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-DEC-05. REMARK 100 THE DEPOSITION ID IS D_1000035540. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.00727 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22581 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 60.746 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 200 DATA REDUNDANCY : 10.30 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.73000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 7.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2F6G REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, AMMONIUM SULFATE, SODIUM REMARK 280 ACETATE, NACL, TRIS, GLYCEROL, IMIDAZOLE, MICROBATCH UNDER OIL, REMARK 280 TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 33.09200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.76450 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 51.09450 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 33.09200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.76450 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 51.09450 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 33.09200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 37.76450 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 51.09450 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 33.09200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 37.76450 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 51.09450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT (EFFECTOR BINDING DOMAIN) IS A DIMER REMARK 300 GENERATED FROM THE MONOMER IN THE ASYMMETRIC UNIT BY THE OPERATION, REMARK 300 1-X, Y, -Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -134.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 132.36800 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 102.18900 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 11770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -358.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 132.36800 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 132.36800 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 102.18900 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 102.18900 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A1004 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 81 REMARK 465 ALA A 82 REMARK 465 LYS A 83 REMARK 465 ARG A 84 REMARK 465 ILE A 85 REMARK 465 ALA A 86 REMARK 465 THR A 87 REMARK 465 VAL A 88 REMARK 465 SER A 89 REMARK 465 SER A 304 REMARK 465 ILE A 305 REMARK 465 LEU A 306 REMARK 465 GLU A 307 REMARK 465 HIS A 308 REMARK 465 HIS A 309 REMARK 465 HIS A 310 REMARK 465 HIS A 311 REMARK 465 HIS A 312 REMARK 465 HIS A 313 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1005 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2F6G RELATED DB: PDB REMARK 900 RELATED ID: 2F6P RELATED DB: PDB REMARK 900 RELATED ID: 2F78 RELATED DB: PDB REMARK 900 RELATED ID: 2F7A RELATED DB: PDB REMARK 900 RELATED ID: 2F7C RELATED DB: PDB REMARK 900 RELATED ID: 2F8D RELATED DB: PDB REMARK 900 RELATED ID: 2F97 RELATED DB: PDB DBREF 2F7B A 81 303 UNP P07774 CATM_ACIAD 81 303 SEQADV 2F7B PRO A 174 UNP P07774 LEU 174 CLONING ARTIFACT SEQADV 2F7B SER A 304 UNP P07774 CLONING ARTIFACT SEQADV 2F7B ILE A 305 UNP P07774 CLONING ARTIFACT SEQADV 2F7B LEU A 306 UNP P07774 CLONING ARTIFACT SEQADV 2F7B GLU A 307 UNP P07774 CLONING ARTIFACT SEQADV 2F7B HIS A 308 UNP P07774 EXPRESSION TAG SEQADV 2F7B HIS A 309 UNP P07774 EXPRESSION TAG SEQADV 2F7B HIS A 310 UNP P07774 EXPRESSION TAG SEQADV 2F7B HIS A 311 UNP P07774 EXPRESSION TAG SEQADV 2F7B HIS A 312 UNP P07774 EXPRESSION TAG SEQADV 2F7B HIS A 313 UNP P07774 EXPRESSION TAG SEQRES 1 A 233 MET ALA LYS ARG ILE ALA THR VAL SER GLN THR LEU ARG SEQRES 2 A 233 ILE GLY TYR VAL SER SER LEU LEU TYR GLY LEU LEU PRO SEQRES 3 A 233 GLU ILE ILE TYR LEU PHE ARG GLN GLN ASN PRO GLU ILE SEQRES 4 A 233 HIS ILE GLU LEU ILE GLU CYS GLY THR LYS ASP GLN ILE SEQRES 5 A 233 ASN ALA LEU LYS GLN GLY LYS ILE ASP LEU GLY PHE GLY SEQRES 6 A 233 ARG LEU LYS ILE THR ASP PRO ALA ILE ARG ARG ILE VAL SEQRES 7 A 233 LEU HIS LYS GLU GLN LEU LYS LEU ALA ILE HIS LYS HIS SEQRES 8 A 233 HIS HIS PRO ASN GLN PHE ALA ALA THR GLY VAL HIS LEU SEQRES 9 A 233 SER GLN ILE ILE ASP GLU PRO MET LEU LEU TYR PRO VAL SEQRES 10 A 233 SER GLN LYS PRO ASN PHE ALA THR PHE ILE GLN SER LEU SEQRES 11 A 233 PHE THR GLU LEU GLY LEU VAL PRO SER LYS LEU THR GLU SEQRES 12 A 233 ILE ARG GLU ILE GLN LEU ALA LEU GLY LEU VAL ALA ALA SEQRES 13 A 233 GLY GLU GLY VAL CYS ILE VAL PRO ALA SER ALA MET ASP SEQRES 14 A 233 ILE GLY VAL LYS ASN LEU LEU TYR ILE PRO ILE LEU ASP SEQRES 15 A 233 ASP ASP ALA TYR SER PRO ILE SER LEU ALA VAL ARG ASN SEQRES 16 A 233 MET ASP HIS SER ASN TYR ILE PRO LYS ILE LEU ALA CYS SEQRES 17 A 233 VAL GLN GLU VAL PHE ALA THR HIS HIS ILE ARG PRO LEU SEQRES 18 A 233 ILE GLU SER ILE LEU GLU HIS HIS HIS HIS HIS HIS HET SO4 A1001 5 HET SO4 A1002 5 HET SO4 A1003 5 HET SO4 A1004 5 HET CL A1005 1 HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION FORMUL 2 SO4 4(O4 S 2-) FORMUL 6 CL CL 1- FORMUL 7 HOH *359(H2 O) HELIX 1 1 SER A 98 GLY A 103 5 6 HELIX 2 2 LEU A 104 ASN A 116 1 13 HELIX 3 3 GLY A 127 GLN A 137 1 11 HELIX 4 4 HIS A 183 ILE A 188 5 6 HELIX 5 5 ASN A 202 GLU A 213 1 12 HELIX 6 6 GLU A 226 ALA A 236 1 11 HELIX 7 7 SER A 246 ILE A 250 5 5 HELIX 8 8 ASN A 280 HIS A 296 1 17 SHEET 1 A 8 HIS A 120 GLU A 125 0 SHEET 2 A 8 THR A 91 TYR A 96 1 N LEU A 92 O HIS A 120 SHEET 3 A 8 LEU A 142 GLY A 145 1 O LEU A 142 N GLY A 95 SHEET 4 A 8 TYR A 266 ARG A 274 -1 O ALA A 272 N GLY A 143 SHEET 5 A 8 ILE A 154 HIS A 169 -1 N HIS A 160 O ILE A 269 SHEET 6 A 8 VAL A 240 PRO A 244 -1 O CYS A 241 N ALA A 167 SHEET 7 A 8 MET A 192 LEU A 194 1 N LEU A 193 O VAL A 240 SHEET 8 A 8 LEU A 221 GLU A 223 1 O THR A 222 N LEU A 194 SHEET 1 B 6 HIS A 120 GLU A 125 0 SHEET 2 B 6 THR A 91 TYR A 96 1 N LEU A 92 O HIS A 120 SHEET 3 B 6 LEU A 142 GLY A 145 1 O LEU A 142 N GLY A 95 SHEET 4 B 6 TYR A 266 ARG A 274 -1 O ALA A 272 N GLY A 143 SHEET 5 B 6 ILE A 154 HIS A 169 -1 N HIS A 160 O ILE A 269 SHEET 6 B 6 LEU A 255 PRO A 259 -1 O ILE A 258 N LEU A 166 CISPEP 1 TYR A 195 PRO A 196 0 -4.63 CISPEP 2 LYS A 200 PRO A 201 0 4.17 SITE 1 AC1 10 GLY A 127 THR A 128 ARG A 146 LEU A 147 SITE 2 AC1 10 PRO A 196 ASN A 202 PHE A 203 HOH A1027 SITE 3 AC1 10 HOH A1036 HOH A1057 SITE 1 AC2 9 LYS A 148 ARG A 156 VAL A 158 LYS A 161 SITE 2 AC2 9 TYR A 266 PRO A 268 HOH A1186 HOH A1235 SITE 3 AC2 9 HOH A1250 SITE 1 AC3 4 HIS A 173 PRO A 174 ASN A 175 GLN A 176 SITE 1 AC4 2 LYS A 170 HIS A 171 SITE 1 AC5 5 ARG A 146 TYR A 195 GLU A 226 ILE A 227 SITE 2 AC5 5 HOH A1035 CRYST1 66.184 75.529 102.189 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015110 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013240 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009790 0.00000