HEADER OXIDOREDUCTASE 06-DEC-05 2F9S TITLE 2ND CRYSTAL STRUCTURE OF A SOLUBLE DOMAIN OF RESA IN THE TITLE 2 OXIDISED FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOL-DISULFIDE OXIDOREDUCTASE RESA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SOLUBLE EXTRACELLULAR DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: RESA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET21 DERIVATIVE KEYWDS THIOREDOXIN-LIKE PROTEIN, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR C.L.COLBERT,Q.WU,P.J.A.ERBEL,K.H.GARDNER,J.DEISENHOFER REVDAT 2 24-FEB-09 2F9S 1 VERSN REVDAT 1 18-APR-06 2F9S 0 JRNL AUTH C.L.COLBERT,Q.WU,P.J.A.ERBEL,K.H.GARDNER, JRNL AUTH 2 J.DEISENHOFER JRNL TITL MECHANISM OF SUBSTRATE SPECIFICITY IN BACILLUS JRNL TITL 2 SUBTILIS RESA, A THIOREDOXIN-LIKE PROTEIN INVOLVED JRNL TITL 3 IN CYTOCHROME C MATURATION JRNL REF PROC.NATL.ACAD.SCI.USA V. 103 4410 2006 JRNL REFN ISSN 0027-8424 JRNL PMID 16537372 JRNL DOI 10.1073/PNAS.0600552103 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 65610 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3477 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4839 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1920 REMARK 3 BIN FREE R VALUE SET COUNT : 238 REMARK 3 BIN FREE R VALUE : 0.1850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2351 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 171 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.36000 REMARK 3 B22 (A**2) : 0.36000 REMARK 3 B33 (A**2) : -0.54000 REMARK 3 B12 (A**2) : 0.18000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.049 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.048 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.029 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.708 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2355 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2115 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3216 ; 1.747 ; 1.945 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4995 ; 1.241 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 281 ; 8.246 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 370 ; 0.122 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2527 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 438 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 424 ; 0.290 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2333 ; 0.240 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1255 ; 0.113 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 112 ; 0.207 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.384 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 47 ; 0.338 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.245 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1410 ; 1.102 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2345 ; 1.847 ; 3.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 945 ; 1.825 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 867 ; 2.722 ; 3.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 2F9S COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-DEC-05. REMARK 100 THE RCSB ID CODE IS RCSB035629. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-NOV-03; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; APS REMARK 200 BEAMLINE : 19-BM; 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9641; 0.9807, 0.9808, 0.9537 REMARK 200 MONOCHROMATOR : SI; SI REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : SBC; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 69296 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.401 REMARK 200 RESOLUTION RANGE LOW (A) : 52.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 1.0 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05100 REMARK 200 FOR THE DATA SET : 17.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 1.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.35300 REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM TRIS HCL; 2.2M AMMONIUM REMARK 280 SULFATE; 2MM L-CYSTEINE, PH 6.8, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 111.33267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 55.66633 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 83.49950 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 27.83317 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 139.16583 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: MONOMER IS THE BIOLOGICAL ASSEMBLY REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 37 REMARK 465 GLU A 176 REMARK 465 THR A 177 REMARK 465 SER A 178 REMARK 465 GLY A 179 REMARK 465 LEU A 180 REMARK 465 GLU A 181 REMARK 465 HIS A 182 REMARK 465 HIS A 183 REMARK 465 HIS A 184 REMARK 465 HIS A 185 REMARK 465 HIS A 186 REMARK 465 HIS A 187 REMARK 465 SER B 37 REMARK 465 GLU B 38 REMARK 465 GLY B 39 REMARK 465 GLU B 176 REMARK 465 THR B 177 REMARK 465 SER B 178 REMARK 465 GLY B 179 REMARK 465 LEU B 180 REMARK 465 GLU B 181 REMARK 465 HIS B 182 REMARK 465 HIS B 183 REMARK 465 HIS B 184 REMARK 465 HIS B 185 REMARK 465 HIS B 186 REMARK 465 HIS B 187 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 GLY A 175 REMARK 475 GLY B 175 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 38 CG CD OE1 OE2 REMARK 480 ARG A 54 NE CZ NH1 NH2 REMARK 480 LYS A 63 CE NZ REMARK 480 GLU A 75 CB CG CD OE1 OE2 REMARK 480 MSE A 84 CG SE CE REMARK 480 LYS A 89 CE NZ REMARK 480 GLU A 149 CB CG CD OE1 OE2 REMARK 480 LYS A 151 CE NZ REMARK 480 MSE A 160 CG SE CE REMARK 480 MSE A 169 CG SE CE REMARK 480 LYS B 61 CB CG CD CE NZ REMARK 480 ASN B 86 CA CB CG OD1 ND2 REMARK 480 ILE B 108 CB CG1 CG2 CD1 REMARK 480 LYS B 115 CD CE NZ REMARK 480 GLN B 130 CG CD OE1 NE2 REMARK 480 ASP B 133 CB CG OD1 OD2 REMARK 480 ASP B 136 CB CG OD1 OD2 REMARK 480 ASP B 167 CB CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 128 O HOH A 260 2.00 REMARK 500 OD2 ASP B 167 O HOH B 254 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 89 CD LYS A 89 CE -0.170 REMARK 500 GLU A 149 CB GLU A 149 CG 0.352 REMARK 500 GLU A 149 CG GLU A 149 CD -0.206 REMARK 500 GLU A 149 CD GLU A 149 OE1 -0.076 REMARK 500 GLU A 149 CD GLU A 149 OE2 -0.237 REMARK 500 LYS A 151 CD LYS A 151 CE -0.396 REMARK 500 PRO A 174 C GLY A 175 N -0.663 REMARK 500 PRO B 174 C GLY B 175 N -0.318 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 149 CG - CD - OE2 ANGL. DEV. = 12.3 DEGREES REMARK 500 LYS A 151 CG - CD - CE ANGL. DEV. = 40.4 DEGREES REMARK 500 PRO A 174 O - C - N ANGL. DEV. = 12.1 DEGREES REMARK 500 GLY A 175 C - N - CA ANGL. DEV. = 37.1 DEGREES REMARK 500 PRO B 174 CA - C - N ANGL. DEV. = 17.9 DEGREES REMARK 500 PRO B 174 O - C - N ANGL. DEV. = -11.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 138 -77.77 -118.82 REMARK 500 SER B 138 126.48 -179.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 PRO B 174 -10.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ST9 RELATED DB: PDB REMARK 900 SIMILAR STRUCTURE FROM ALTERNATIVE CONDITIONS. REMARK 900 RELATED ID: 1SU9 RELATED DB: PDB REMARK 900 REDUCED FORM OF RESA DBREF 2F9S A 37 179 UNP P35160 RESA_BACSU 37 179 DBREF 2F9S B 37 179 UNP P35160 RESA_BACSU 37 179 SEQADV 2F9S MSE A 84 UNP P35160 MET 84 MODIFIED RESIDUE SEQADV 2F9S MSE A 114 UNP P35160 MET 114 MODIFIED RESIDUE SEQADV 2F9S MSE A 160 UNP P35160 MET 160 MODIFIED RESIDUE SEQADV 2F9S MSE A 164 UNP P35160 MET 164 MODIFIED RESIDUE SEQADV 2F9S MSE A 169 UNP P35160 MET 169 MODIFIED RESIDUE SEQADV 2F9S LEU A 180 UNP P35160 EXPRESSION TAG SEQADV 2F9S GLU A 181 UNP P35160 EXPRESSION TAG SEQADV 2F9S HIS A 182 UNP P35160 EXPRESSION TAG SEQADV 2F9S HIS A 183 UNP P35160 EXPRESSION TAG SEQADV 2F9S HIS A 184 UNP P35160 EXPRESSION TAG SEQADV 2F9S HIS A 185 UNP P35160 EXPRESSION TAG SEQADV 2F9S HIS A 186 UNP P35160 EXPRESSION TAG SEQADV 2F9S HIS A 187 UNP P35160 EXPRESSION TAG SEQADV 2F9S MSE B 84 UNP P35160 MET 84 MODIFIED RESIDUE SEQADV 2F9S MSE B 114 UNP P35160 MET 114 MODIFIED RESIDUE SEQADV 2F9S MSE B 160 UNP P35160 MET 160 MODIFIED RESIDUE SEQADV 2F9S MSE B 164 UNP P35160 MET 164 MODIFIED RESIDUE SEQADV 2F9S MSE B 169 UNP P35160 MET 169 MODIFIED RESIDUE SEQADV 2F9S LEU B 180 UNP P35160 EXPRESSION TAG SEQADV 2F9S GLU B 181 UNP P35160 EXPRESSION TAG SEQADV 2F9S HIS B 182 UNP P35160 EXPRESSION TAG SEQADV 2F9S HIS B 183 UNP P35160 EXPRESSION TAG SEQADV 2F9S HIS B 184 UNP P35160 EXPRESSION TAG SEQADV 2F9S HIS B 185 UNP P35160 EXPRESSION TAG SEQADV 2F9S HIS B 186 UNP P35160 EXPRESSION TAG SEQADV 2F9S HIS B 187 UNP P35160 EXPRESSION TAG SEQRES 1 A 151 SER GLU GLY SER ASP ALA PRO ASN PHE VAL LEU GLU ASP SEQRES 2 A 151 THR ASN GLY LYS ARG ILE GLU LEU SER ASP LEU LYS GLY SEQRES 3 A 151 LYS GLY VAL PHE LEU ASN PHE TRP GLY THR TRP CYS GLU SEQRES 4 A 151 PRO CYS LYS LYS GLU PHE PRO TYR MSE ALA ASN GLN TYR SEQRES 5 A 151 LYS HIS PHE LYS SER GLN GLY VAL GLU ILE VAL ALA VAL SEQRES 6 A 151 ASN VAL GLY GLU SER LYS ILE ALA VAL HIS ASN PHE MSE SEQRES 7 A 151 LYS SER TYR GLY VAL ASN PHE PRO VAL VAL LEU ASP THR SEQRES 8 A 151 ASP ARG GLN VAL LEU ASP ALA TYR ASP VAL SER PRO LEU SEQRES 9 A 151 PRO THR THR PHE LEU ILE ASN PRO GLU GLY LYS VAL VAL SEQRES 10 A 151 LYS VAL VAL THR GLY THR MSE THR GLU SER MSE ILE HIS SEQRES 11 A 151 ASP TYR MSE ASN LEU ILE LYS PRO GLY GLU THR SER GLY SEQRES 12 A 151 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 151 SER GLU GLY SER ASP ALA PRO ASN PHE VAL LEU GLU ASP SEQRES 2 B 151 THR ASN GLY LYS ARG ILE GLU LEU SER ASP LEU LYS GLY SEQRES 3 B 151 LYS GLY VAL PHE LEU ASN PHE TRP GLY THR TRP CYS GLU SEQRES 4 B 151 PRO CYS LYS LYS GLU PHE PRO TYR MSE ALA ASN GLN TYR SEQRES 5 B 151 LYS HIS PHE LYS SER GLN GLY VAL GLU ILE VAL ALA VAL SEQRES 6 B 151 ASN VAL GLY GLU SER LYS ILE ALA VAL HIS ASN PHE MSE SEQRES 7 B 151 LYS SER TYR GLY VAL ASN PHE PRO VAL VAL LEU ASP THR SEQRES 8 B 151 ASP ARG GLN VAL LEU ASP ALA TYR ASP VAL SER PRO LEU SEQRES 9 B 151 PRO THR THR PHE LEU ILE ASN PRO GLU GLY LYS VAL VAL SEQRES 10 B 151 LYS VAL VAL THR GLY THR MSE THR GLU SER MSE ILE HIS SEQRES 11 B 151 ASP TYR MSE ASN LEU ILE LYS PRO GLY GLU THR SER GLY SEQRES 12 B 151 LEU GLU HIS HIS HIS HIS HIS HIS MODRES 2F9S MSE A 84 MET SELENOMETHIONINE MODRES 2F9S MSE A 114 MET SELENOMETHIONINE MODRES 2F9S MSE A 160 MET SELENOMETHIONINE MODRES 2F9S MSE A 164 MET SELENOMETHIONINE MODRES 2F9S MSE A 169 MET SELENOMETHIONINE MODRES 2F9S MSE B 84 MET SELENOMETHIONINE MODRES 2F9S MSE B 114 MET SELENOMETHIONINE MODRES 2F9S MSE B 160 MET SELENOMETHIONINE MODRES 2F9S MSE B 164 MET SELENOMETHIONINE MODRES 2F9S MSE B 169 MET SELENOMETHIONINE HET MSE A 84 11 HET MSE A 114 8 HET MSE A 160 11 HET MSE A 164 8 HET MSE A 169 11 HET MSE B 84 8 HET MSE B 114 8 HET MSE B 160 8 HET MSE B 164 8 HET MSE B 169 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 HOH *171(H2 O) HELIX 1 1 SER A 58 LYS A 61 5 4 HELIX 2 2 CYS A 74 LYS A 92 1 19 HELIX 3 3 SER A 106 GLY A 118 1 13 HELIX 4 4 ARG A 129 TYR A 135 1 7 HELIX 5 5 THR A 161 LYS A 173 1 13 HELIX 6 6 SER B 58 LYS B 61 5 4 HELIX 7 7 CYS B 74 LYS B 92 1 19 HELIX 8 8 SER B 106 GLY B 118 1 13 HELIX 9 9 ARG B 129 TYR B 135 1 7 HELIX 10 10 THR B 161 LYS B 173 1 13 SHEET 1 A 6 SER A 40 ASP A 41 0 SHEET 2 A 6 LYS A 151 THR A 157 -1 O VAL A 152 N SER A 40 SHEET 3 A 6 THR A 142 ILE A 146 -1 N LEU A 145 O LYS A 154 SHEET 4 A 6 GLY A 64 TRP A 70 -1 N PHE A 69 O THR A 142 SHEET 5 A 6 VAL A 96 VAL A 103 1 O GLU A 97 N GLY A 64 SHEET 6 A 6 VAL A 123 ASP A 126 1 O VAL A 124 N ASN A 102 SHEET 1 B 2 VAL A 46 GLU A 48 0 SHEET 2 B 2 ARG A 54 GLU A 56 -1 O ILE A 55 N LEU A 47 SHEET 1 C 2 VAL B 46 GLU B 48 0 SHEET 2 C 2 ARG B 54 GLU B 56 -1 O ILE B 55 N LEU B 47 SHEET 1 D 5 VAL B 123 ASP B 126 0 SHEET 2 D 5 VAL B 96 VAL B 103 1 N ASN B 102 O VAL B 124 SHEET 3 D 5 GLY B 64 TRP B 70 1 N GLY B 64 O GLU B 97 SHEET 4 D 5 THR B 142 ILE B 146 -1 O THR B 142 N PHE B 69 SHEET 5 D 5 VAL B 152 THR B 157 -1 O VAL B 153 N LEU B 145 SSBOND 1 CYS A 74 CYS A 77 1555 1555 2.99 SSBOND 2 CYS B 74 CYS B 77 1555 1555 2.94 LINK C TYR A 83 N MSE A 84 1555 1555 1.33 LINK C MSE A 84 N ALA A 85 1555 1555 1.32 LINK C PHE A 113 N MSE A 114 1555 1555 1.32 LINK C MSE A 114 N LYS A 115 1555 1555 1.33 LINK C THR A 159 N MSE A 160 1555 1555 1.32 LINK C MSE A 160 N THR A 161 1555 1555 1.32 LINK C SER A 163 N MSE A 164 1555 1555 1.33 LINK C MSE A 164 N ILE A 165 1555 1555 1.33 LINK C TYR A 168 N MSE A 169 1555 1555 1.33 LINK C MSE A 169 N ASN A 170 1555 1555 1.34 LINK C TYR B 83 N MSE B 84 1555 1555 1.33 LINK C MSE B 84 N ALA B 85 1555 1555 1.33 LINK C PHE B 113 N MSE B 114 1555 1555 1.33 LINK C MSE B 114 N LYS B 115 1555 1555 1.32 LINK C THR B 159 N MSE B 160 1555 1555 1.33 LINK C MSE B 160 N THR B 161 1555 1555 1.33 LINK C SER B 163 N MSE B 164 1555 1555 1.33 LINK C MSE B 164 N ILE B 165 1555 1555 1.33 LINK C TYR B 168 N MSE B 169 1555 1555 1.33 LINK C MSE B 169 N ASN B 170 1555 1555 1.33 CISPEP 1 LEU A 140 PRO A 141 0 -3.59 CISPEP 2 PRO A 174 GLY A 175 0 3.25 CISPEP 3 SER B 138 PRO B 139 0 -4.27 CISPEP 4 LEU B 140 PRO B 141 0 -8.40 CRYST1 61.186 61.186 166.999 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016344 0.009436 0.000000 0.00000 SCALE2 0.000000 0.018872 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005988 0.00000