data_2FDT # _entry.id 2FDT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2FDT pdb_00002fdt 10.2210/pdb2fdt/pdb RCSB RCSB035757 ? ? WWPDB D_1000035757 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2FDT _pdbx_database_status.recvd_initial_deposition_date 2005-12-14 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nomura, Y.' 1 'Baba, S.' 2 'Nakazato, S.' 3 'Sakamoto, T.' 4 'Kajikawa, M.' 5 'Okada, N.' 6 'Kawai, G.' 7 # _citation.id primary _citation.title 'Solution structure and functional importance of a conserved RNA hairpin of eel LINE UnaL2' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 34 _citation.page_first 5184 _citation.page_last 5193 _citation.year 2006 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17000640 _citation.pdbx_database_id_DOI 10.1093/nar/gkl664 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nomura, Y.' 1 ? primary 'Kajikawa, M.' 2 ? primary 'Baba, S.' 3 ? primary 'Nakazato, S.' 4 ? primary 'Imai, T.' 5 ? primary 'Sakamoto, T.' 6 ? primary 'Okada, N.' 7 ? primary 'Kawai, G.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 36-mer _entity.formula_weight 11559.860 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ;Conserved 3' tail RNA hairpin of eel LINE UnaL2 ; # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGUUGUACGUCGCUUUGGAUAAAAGCGUCUGCGACC _entity_poly.pdbx_seq_one_letter_code_can GGUUGUACGUCGCUUUGGAUAAAAGCGUCUGCGACC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 U n 1 4 U n 1 5 G n 1 6 U n 1 7 A n 1 8 C n 1 9 G n 1 10 U n 1 11 C n 1 12 G n 1 13 C n 1 14 U n 1 15 U n 1 16 U n 1 17 G n 1 18 G n 1 19 A n 1 20 U n 1 21 A n 1 22 A n 1 23 A n 1 24 A n 1 25 G n 1 26 C n 1 27 G n 1 28 U n 1 29 C n 1 30 U n 1 31 G n 1 32 C n 1 33 G n 1 34 A n 1 35 C n 1 36 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details ;LINE36 were synthesized enzymatically by in vitro transcription with AmpliScribe T7 or T7 Flash transcription kits (Epicentre Technologies Co.) using by 13C- and 15N-labeled NTPs (Taiyo Nippon sanso). ; # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 2FDT _struct_ref.pdbx_db_accession 2FDT _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2FDT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 36 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 2FDT _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 36 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 36 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 '2D NOESY, 2D TOCSY' 1 2 1 '2D NOESY, 2D TOCSY, DQF-COSY, HP-COSY' 2 3 1 '2D HNN-COSY, 2D HSQC' 3 4 1 'HCP, HALF FILTERED NOESY, 2D HSQC, 2D TROSY' 4 5 1 '2D HNN-COSY, 2D HSQC' 5 6 1 'HCP, HALF FILTERED NOESY, 2D HSQC, 2D TROSY' 6 7 1 '2D HSQC, 2D TROSY' 7 8 1 '2D HSQC, 2D TROSY' 8 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 6.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength '50mM NaCl' _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '0.9mM RNA; 10mM PHOSPHATE BUFFER (pH 6.0); 50mM NACL; 95% H2O, 5% D2O' '95% H2O/5% D2O' 2 '0.9mM RNA; 10mM PHOSPHATE BUFFER (pH 6.0); 50mM NACL; 100% D2O' '100% D2O' 3 '0.3mM RNA U-15N, 13C-GUANOSINE, CYTIDINE; 10mM PHOSPHATE BUFFER (pH 6.0); 50mM NACL; 95% H2O, 5% D2O' '95% H2O/5% D2O' 4 '0.3mM RNA U-15N, 13C-GUANOSINE, CYTIDINE; 10mM PHOSPHATE BUFFER (pH 6.0); 50mM NACL; 100% D2O' '100% D2O' 5 '0.9mM RNA U-15N, 13C-ADENOSINE, URIDINE; 10mM PHOSPHATE BUFFER (pH 6.0); 50mM NACL; 95% H2O, 5% D2O' '95% H2O/5% D2O' 6 '0.9mM RNA U-15N, 13C-ADENOSINE, URIDINE; 10mM PHOSPHATE BUFFER (pH 6.0); 50mM NACL; 100% D2O' '100% D2O' 7 '0.3mM RNA U-15N, 13C-GUANOSINE, CYTIDINE; 10mM PHOSPHATE BUFFER (pH 6.0); 50mM NACL; 16mg/ml PF1 BACTERIAPHAGE; 100% D2O' '100% D2O' 8 '0.9mM RNA U-15N, 13C-ADENOSINE, URIDINE; 10mM PHOSPHATE BUFFER (pH 6.0); 50mM NACL; 16mg/ml PF1 BACTERIAPHAGE; 100% D2O' '100% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.type 1 DRX Bruker 500 ? 2 DRX Bruker 600 ? # _pdbx_nmr_refine.entry_id 2FDT _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ;A total of 404 NOE distance restraints including the seven restraints for the absence of NOE cross peaks, 182 dihedral restraints, 62 hydrogen bonding restraints, 11 planarity restraints and 144 chiral restraints were used.Furthermore, refinement structures using 75 RDC restraints. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2FDT _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 11 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2FDT _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'minimized average structure' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.6 ? 1 'data analysis' Felix 97.0 ? 2 'structure solution' Discover 97.0 ? 3 refinement XPLOR-NIH 2.10 ? 4 # _exptl.entry_id 2FDT _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2FDT _struct.title 'Solution structure of a conserved RNA hairpin of eel LINE UnaL2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details 'minimized average' # _struct_keywords.entry_id 2FDT _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'RDC, LINE, retrotransposition, RNA hairpin, RNA' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 36 N3 ? ? A G 1 A C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 36 O2 ? ? A G 1 A C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 36 N4 ? ? A G 1 A C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 35 N3 ? ? A G 2 A C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 35 O2 ? ? A G 2 A C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 35 N4 ? ? A G 2 A C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A U 3 N3 ? ? ? 1_555 A A 34 N1 ? ? A U 3 A A 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A U 3 O4 ? ? ? 1_555 A A 34 N6 ? ? A U 3 A A 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A U 4 N3 ? ? ? 1_555 A G 33 O6 ? ? A U 4 A G 33 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog10 hydrog ? ? A U 4 O2 ? ? ? 1_555 A G 33 N1 ? ? A U 4 A G 33 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog11 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 32 N3 ? ? A G 5 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 32 O2 ? ? A G 5 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 32 N4 ? ? A G 5 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A U 6 N3 ? ? ? 1_555 A G 31 O6 ? ? A U 6 A G 31 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog15 hydrog ? ? A U 6 O2 ? ? ? 1_555 A G 31 N1 ? ? A U 6 A G 31 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog16 hydrog ? ? A G 9 N1 ? ? ? 1_555 A C 29 N3 ? ? A G 9 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 9 N2 ? ? ? 1_555 A C 29 O2 ? ? A G 9 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 9 O6 ? ? ? 1_555 A C 29 N4 ? ? A G 9 A C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A U 10 N3 ? ? ? 1_555 A U 28 O2 ? ? A U 10 A U 28 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog20 hydrog ? ? A U 10 O4 ? ? ? 1_555 A U 28 N3 ? ? A U 10 A U 28 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog21 hydrog ? ? A C 11 N3 ? ? ? 1_555 A G 27 N1 ? ? A C 11 A G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 11 N4 ? ? ? 1_555 A G 27 O6 ? ? A C 11 A G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A C 11 O2 ? ? ? 1_555 A G 27 N2 ? ? A C 11 A G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 12 N1 ? ? ? 1_555 A C 26 N3 ? ? A G 12 A C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 12 N2 ? ? ? 1_555 A C 26 O2 ? ? A G 12 A C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 12 O6 ? ? ? 1_555 A C 26 N4 ? ? A G 12 A C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 25 N1 ? ? A C 13 A G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 25 O6 ? ? A C 13 A G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 25 N2 ? ? A C 13 A G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A U 14 N3 ? ? ? 1_555 A A 24 N1 ? ? A U 14 A A 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A U 14 O4 ? ? ? 1_555 A A 24 N6 ? ? A U 14 A A 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A U 15 N3 ? ? ? 1_555 A A 23 N1 ? ? A U 15 A A 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A U 15 O4 ? ? ? 1_555 A A 23 N6 ? ? A U 15 A A 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 17 N3 ? ? ? 1_555 A A 21 N6 ? ? A G 17 A A 21 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 2FDT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2FDT _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 U 3 3 3 U U A . n A 1 4 U 4 4 4 U U A . n A 1 5 G 5 5 5 G G A . n A 1 6 U 6 6 6 U U A . n A 1 7 A 7 7 7 A A A . n A 1 8 C 8 8 8 C C A . n A 1 9 G 9 9 9 G G A . n A 1 10 U 10 10 10 U U A . n A 1 11 C 11 11 11 C C A . n A 1 12 G 12 12 12 G G A . n A 1 13 C 13 13 13 C C A . n A 1 14 U 14 14 14 U U A . n A 1 15 U 15 15 15 U U A . n A 1 16 U 16 16 16 U U A . n A 1 17 G 17 17 17 G G A . n A 1 18 G 18 18 18 G G A . n A 1 19 A 19 19 19 A A A . n A 1 20 U 20 20 20 U U A . n A 1 21 A 21 21 21 A A A . n A 1 22 A 22 22 22 A A A . n A 1 23 A 23 23 23 A A A . n A 1 24 A 24 24 24 A A A . n A 1 25 G 25 25 25 G G A . n A 1 26 C 26 26 26 C C A . n A 1 27 G 27 27 27 G G A . n A 1 28 U 28 28 28 U U A . n A 1 29 C 29 29 29 C C A . n A 1 30 U 30 30 30 U U A . n A 1 31 G 31 31 31 G G A . n A 1 32 C 32 32 32 C C A . n A 1 33 G 33 33 33 G G A . n A 1 34 A 34 34 34 A A A . n A 1 35 C 35 35 35 C C A . n A 1 36 C 36 36 36 C C A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-12-05 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 6 H22 A G 17 ? ? H62 A A 21 ? ? 1.32 2 9 "HO2'" A G 18 ? ? "O5'" A A 19 ? ? 1.38 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 3 N3 A U 15 ? ? C4 A U 15 ? ? 1.436 1.380 0.056 0.009 N 2 4 N3 A U 15 ? ? C4 A U 15 ? ? 1.434 1.380 0.054 0.009 N 3 5 N3 A U 15 ? ? C4 A U 15 ? ? 1.435 1.380 0.055 0.009 N 4 6 N3 A U 15 ? ? C4 A U 15 ? ? 1.437 1.380 0.057 0.009 N 5 8 N3 A U 15 ? ? C4 A U 15 ? ? 1.434 1.380 0.054 0.009 N 6 9 N3 A U 15 ? ? C4 A U 15 ? ? 1.436 1.380 0.056 0.009 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 2 N1 A A 24 ? ? C6 A A 24 ? ? N6 A A 24 ? ? 114.60 118.60 -4.00 0.60 N 2 2 N1 A A 34 ? ? C6 A A 34 ? ? N6 A A 34 ? ? 114.93 118.60 -3.67 0.60 N 3 2 N1 A C 35 ? ? "C1'" A C 35 ? ? "C2'" A C 35 ? ? 123.19 114.00 9.19 1.30 N 4 3 N1 A A 24 ? ? C6 A A 24 ? ? N6 A A 24 ? ? 114.89 118.60 -3.71 0.60 N 5 4 N1 A A 24 ? ? C6 A A 24 ? ? N6 A A 24 ? ? 114.67 118.60 -3.93 0.60 N 6 4 N1 A A 34 ? ? C6 A A 34 ? ? N6 A A 34 ? ? 114.91 118.60 -3.69 0.60 N 7 5 N1 A A 24 ? ? C6 A A 24 ? ? N6 A A 24 ? ? 114.78 118.60 -3.82 0.60 N 8 6 N1 A A 24 ? ? C6 A A 24 ? ? N6 A A 24 ? ? 114.79 118.60 -3.81 0.60 N 9 7 N9 A A 23 ? ? "C1'" A A 23 ? ? "C2'" A A 23 ? ? 123.05 114.00 9.05 1.30 N 10 7 N1 A A 23 ? ? C6 A A 23 ? ? N6 A A 23 ? ? 114.66 118.60 -3.94 0.60 N 11 7 N1 A A 24 ? ? C6 A A 24 ? ? N6 A A 24 ? ? 114.85 118.60 -3.75 0.60 N 12 7 N1 A C 35 ? ? "C1'" A C 35 ? ? "C2'" A C 35 ? ? 122.65 114.00 8.65 1.30 N 13 8 N1 A C 11 ? ? "C1'" A C 11 ? ? "C2'" A C 11 ? ? 121.86 114.00 7.86 1.30 N 14 8 N1 A A 24 ? ? C6 A A 24 ? ? N6 A A 24 ? ? 114.80 118.60 -3.80 0.60 N 15 9 N1 A C 11 ? ? "C1'" A C 11 ? ? "C2'" A C 11 ? ? 122.38 114.00 8.38 1.30 N 16 9 N1 A A 24 ? ? C6 A A 24 ? ? N6 A A 24 ? ? 114.89 118.60 -3.71 0.60 N 17 10 N9 A A 23 ? ? "C1'" A A 23 ? ? "C2'" A A 23 ? ? 122.77 114.00 8.77 1.30 N 18 10 N1 A A 23 ? ? C6 A A 23 ? ? N6 A A 23 ? ? 114.74 118.60 -3.86 0.60 N 19 10 N1 A A 24 ? ? C6 A A 24 ? ? N6 A A 24 ? ? 114.89 118.60 -3.71 0.60 N 20 11 N1 A A 24 ? ? C6 A A 24 ? ? N6 A A 24 ? ? 114.47 118.60 -4.13 0.60 N 21 11 N1 A C 35 ? ? "C1'" A C 35 ? ? "C2'" A C 35 ? ? 122.61 114.00 8.61 1.30 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 2 U A 6 ? ? 0.076 'SIDE CHAIN' 2 2 C A 13 ? ? 0.110 'SIDE CHAIN' 3 2 C A 26 ? ? 0.095 'SIDE CHAIN' 4 2 C A 35 ? ? 0.118 'SIDE CHAIN' 5 3 U A 6 ? ? 0.074 'SIDE CHAIN' 6 3 C A 13 ? ? 0.123 'SIDE CHAIN' 7 3 C A 35 ? ? 0.094 'SIDE CHAIN' 8 4 U A 6 ? ? 0.069 'SIDE CHAIN' 9 4 C A 13 ? ? 0.124 'SIDE CHAIN' 10 4 C A 26 ? ? 0.064 'SIDE CHAIN' 11 4 C A 35 ? ? 0.086 'SIDE CHAIN' 12 5 U A 6 ? ? 0.071 'SIDE CHAIN' 13 5 C A 13 ? ? 0.135 'SIDE CHAIN' 14 5 C A 35 ? ? 0.085 'SIDE CHAIN' 15 6 U A 6 ? ? 0.077 'SIDE CHAIN' 16 6 C A 13 ? ? 0.122 'SIDE CHAIN' 17 6 C A 35 ? ? 0.096 'SIDE CHAIN' 18 7 U A 6 ? ? 0.076 'SIDE CHAIN' 19 7 C A 13 ? ? 0.112 'SIDE CHAIN' 20 7 C A 26 ? ? 0.106 'SIDE CHAIN' 21 7 C A 35 ? ? 0.115 'SIDE CHAIN' 22 8 U A 6 ? ? 0.079 'SIDE CHAIN' 23 8 C A 13 ? ? 0.114 'SIDE CHAIN' 24 8 C A 26 ? ? 0.098 'SIDE CHAIN' 25 8 C A 35 ? ? 0.099 'SIDE CHAIN' 26 9 U A 6 ? ? 0.066 'SIDE CHAIN' 27 9 C A 13 ? ? 0.122 'SIDE CHAIN' 28 9 C A 26 ? ? 0.062 'SIDE CHAIN' 29 9 C A 35 ? ? 0.097 'SIDE CHAIN' 30 10 U A 6 ? ? 0.073 'SIDE CHAIN' 31 10 C A 13 ? ? 0.112 'SIDE CHAIN' 32 10 U A 15 ? ? 0.056 'SIDE CHAIN' 33 10 C A 26 ? ? 0.098 'SIDE CHAIN' 34 10 C A 35 ? ? 0.097 'SIDE CHAIN' 35 11 U A 6 ? ? 0.074 'SIDE CHAIN' 36 11 C A 13 ? ? 0.121 'SIDE CHAIN' 37 11 C A 26 ? ? 0.104 'SIDE CHAIN' 38 11 C A 35 ? ? 0.105 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2FDT 'double helix' 2FDT 'a-form double helix' 2FDT 'hairpin loop' 2FDT 'mismatched base pair' 2FDT 'internal loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 36 1_555 -0.094 0.160 0.011 2.162 9.886 -2.176 1 A_G1:C36_A A 1 ? A 36 ? 19 1 1 A G 2 1_555 A C 35 1_555 -0.088 0.138 -0.596 -5.830 2.555 -2.169 2 A_G2:C35_A A 2 ? A 35 ? 19 1 1 A U 3 1_555 A A 34 1_555 0.158 -0.056 -0.764 -2.125 -15.821 -17.178 3 A_U3:A34_A A 3 ? A 34 ? 20 1 1 A U 4 1_555 A G 33 1_555 2.647 -0.178 0.152 -3.695 -11.688 -2.168 4 A_U4:G33_A A 4 ? A 33 ? 28 ? 1 A G 5 1_555 A C 32 1_555 -0.419 0.024 0.340 -8.467 -18.737 -2.352 5 A_G5:C32_A A 5 ? A 32 ? 19 1 1 A U 6 1_555 A G 31 1_555 2.901 -0.292 0.222 -13.281 -21.190 0.524 6 A_U6:G31_A A 6 ? A 31 ? 28 ? 1 A G 9 1_555 A C 29 1_555 -0.470 0.055 -0.097 0.487 -10.032 -1.104 7 A_G9:C29_A A 9 ? A 29 ? 19 1 1 A U 10 1_555 A U 28 1_555 -2.557 -1.477 0.338 8.188 -16.335 5.699 8 A_U10:U28_A A 10 ? A 28 ? 16 1 1 A C 11 1_555 A G 27 1_555 0.013 0.167 0.059 -5.304 -12.423 0.224 9 A_C11:G27_A A 11 ? A 27 ? 19 1 1 A G 12 1_555 A C 26 1_555 0.014 0.166 0.195 -5.714 -1.994 -2.730 10 A_G12:C26_A A 12 ? A 26 ? 19 1 1 A C 13 1_555 A G 25 1_555 -0.015 0.203 -0.021 9.798 -1.955 -2.472 11 A_C13:G25_A A 13 ? A 25 ? 19 1 1 A U 14 1_555 A A 24 1_555 0.099 -0.165 -1.318 14.671 -17.905 -15.051 12 A_U14:A24_A A 14 ? A 24 ? 20 1 1 A U 15 1_555 A A 23 1_555 0.141 0.016 -0.493 5.480 -17.319 -16.343 13 A_U15:A23_A A 15 ? A 23 ? 20 1 1 A G 17 1_555 A A 21 1_555 7.066 -3.200 0.461 11.776 16.337 8.899 14 A_G17:A21_A A 17 ? A 21 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 36 1_555 A G 2 1_555 A C 35 1_555 -0.149 -2.175 3.764 4.705 11.861 28.781 -6.289 1.178 2.628 22.517 -8.933 31.428 1 AA_G1G2:C35C36_AA A 1 ? A 36 ? A 2 ? A 35 ? 1 A G 2 1_555 A C 35 1_555 A U 3 1_555 A A 34 1_555 -1.120 -1.457 3.770 3.716 6.250 31.672 -3.803 2.715 3.281 11.266 -6.699 32.475 2 AA_G2U3:A34C35_AA A 2 ? A 35 ? A 3 ? A 34 ? 1 A U 3 1_555 A A 34 1_555 A U 4 1_555 A G 33 1_555 1.040 -1.043 3.695 -2.524 9.144 38.797 -2.674 -1.840 3.305 13.520 3.732 39.896 3 AA_U3U4:G33A34_AA A 3 ? A 34 ? A 4 ? A 33 ? 1 A U 4 1_555 A G 33 1_555 A G 5 1_555 A C 32 1_555 0.323 -2.255 3.177 1.387 14.675 21.464 -8.113 -0.425 1.390 34.630 -3.273 25.989 4 AA_U4G5:C32G33_AA A 4 ? A 33 ? A 5 ? A 32 ? 1 A G 5 1_555 A C 32 1_555 A U 6 1_555 A G 31 1_555 -0.069 -0.957 3.604 4.489 7.281 46.266 -1.848 0.485 3.404 9.174 -5.656 47.007 5 AA_G5U6:G31C32_AA A 5 ? A 32 ? A 6 ? A 31 ? 1 A U 6 1_555 A G 31 1_555 A G 9 1_555 A C 29 1_555 -0.727 -3.935 5.287 11.548 29.647 52.120 -5.834 1.472 2.690 30.726 -11.968 60.479 6 AA_U6G9:C29G31_AA A 6 ? A 31 ? A 9 ? A 29 ? 1 A G 9 1_555 A C 29 1_555 A U 10 1_555 A U 28 1_555 0.194 -1.798 2.957 -8.422 7.989 25.700 -5.224 -2.009 2.145 16.904 17.822 28.159 7 AA_G9U10:U28C29_AA A 9 ? A 29 ? A 10 ? A 28 ? 1 A U 10 1_555 A U 28 1_555 A C 11 1_555 A G 27 1_555 -0.168 -0.843 3.813 0.224 8.886 50.680 -1.669 0.212 3.626 10.290 -0.259 51.403 8 AA_U10C11:G27U28_AA A 10 ? A 28 ? A 11 ? A 27 ? 1 A C 11 1_555 A G 27 1_555 A G 12 1_555 A C 26 1_555 -0.539 -1.626 3.242 -2.130 13.448 26.628 -5.631 0.653 2.217 27.065 4.287 29.851 9 AA_C11G12:C26G27_AA A 11 ? A 27 ? A 12 ? A 26 ? 1 A G 12 1_555 A C 26 1_555 A C 13 1_555 A G 25 1_555 -0.108 -1.347 3.259 0.933 1.374 29.339 -2.946 0.411 3.189 2.709 -1.839 29.385 10 AA_G12C13:G25C26_AA A 12 ? A 26 ? A 13 ? A 25 ? 1 A C 13 1_555 A G 25 1_555 A U 14 1_555 A A 24 1_555 -0.997 -1.152 3.298 7.034 14.170 31.178 -3.874 2.633 2.305 24.488 -12.156 34.873 11 AA_C13U14:A24G25_AA A 13 ? A 25 ? A 14 ? A 24 ? 1 A U 14 1_555 A A 24 1_555 A U 15 1_555 A A 23 1_555 0.646 -1.426 3.990 -1.843 7.370 36.298 -3.404 -1.307 3.606 11.673 2.920 37.058 12 AA_U14U15:A23A24_AA A 14 ? A 24 ? A 15 ? A 23 ? #