HEADER TRANSCRIPTION 17-DEC-05 2FEZ TITLE MYCOBACTERIUM TUBERCULOSIS EMBR COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE REGULATORY PROTEIN EMBR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: EMBR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: C41(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET23C KEYWDS TRANSCRIPTIONAL REGULATOR; WINGED-HELIX; TETRATRICOPEPTIDE REPEAT; KEYWDS 2 BETA-SANDWICH;, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR K.FUTTERER,L.J.ALDERWICK,G.S.BESRA REVDAT 5 14-FEB-24 2FEZ 1 REMARK REVDAT 4 13-JUL-11 2FEZ 1 VERSN REVDAT 3 24-FEB-09 2FEZ 1 VERSN REVDAT 2 16-MAY-06 2FEZ 1 JRNL REVDAT 1 24-JAN-06 2FEZ 0 JRNL AUTH L.J.ALDERWICK,V.MOLLE,L.KREMER,A.J.COZZONE,T.R.DAFFORN, JRNL AUTH 2 G.S.BESRA,K.FUTTERER JRNL TITL MOLECULAR STRUCTURE OF EMBR, A RESPONSE ELEMENT OF SER/THR JRNL TITL 2 KINASE SIGNALING IN MYCOBACTERIUM TUBERCULOSIS JRNL REF PROC.NATL.ACAD.SCI.USA V. 103 2558 2006 JRNL REFN ISSN 0027-8424 JRNL PMID 16477027 JRNL DOI 10.1073/PNAS.0507766103 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 29959 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1591 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2184 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.2590 REMARK 3 BIN FREE R VALUE SET COUNT : 118 REMARK 3 BIN FREE R VALUE : 0.3000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2847 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 240 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.18000 REMARK 3 B22 (A**2) : -0.93000 REMARK 3 B33 (A**2) : -0.24000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.177 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.149 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.110 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.441 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2904 ; 0.007 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3956 ; 1.061 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 372 ; 5.023 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 130 ;34.789 ;22.538 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 456 ;14.780 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;20.318 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 457 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2228 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1323 ; 0.187 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1974 ; 0.294 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 203 ; 0.142 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 39 ; 0.402 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.218 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1909 ; 0.443 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2978 ; 0.767 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1112 ; 1.249 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 978 ; 2.073 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 10 A 105 REMARK 3 ORIGIN FOR THE GROUP (A): 17.7950 54.6470 49.6430 REMARK 3 T TENSOR REMARK 3 T11: -0.1110 T22: -0.1148 REMARK 3 T33: -0.1197 T12: -0.0300 REMARK 3 T13: 0.0337 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 1.8931 L22: 3.6728 REMARK 3 L33: 2.3380 L12: -0.2608 REMARK 3 L13: 0.4502 L23: -0.9779 REMARK 3 S TENSOR REMARK 3 S11: 0.0140 S12: 0.0491 S13: 0.0861 REMARK 3 S21: 0.1785 S22: -0.0466 S23: -0.0677 REMARK 3 S31: -0.1065 S32: 0.1662 S33: 0.0326 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 107 A 285 REMARK 3 ORIGIN FOR THE GROUP (A): 11.3730 22.7480 56.5800 REMARK 3 T TENSOR REMARK 3 T11: -0.0478 T22: -0.0607 REMARK 3 T33: -0.0425 T12: -0.0125 REMARK 3 T13: -0.0232 T23: -0.0059 REMARK 3 L TENSOR REMARK 3 L11: 1.6361 L22: 3.0626 REMARK 3 L33: 0.9890 L12: 0.7229 REMARK 3 L13: 0.3739 L23: -0.4775 REMARK 3 S TENSOR REMARK 3 S11: 0.1994 S12: -0.0545 S13: -0.3041 REMARK 3 S21: 0.2782 S22: -0.1346 S23: -0.1266 REMARK 3 S31: 0.0461 S32: 0.0807 S33: -0.0649 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 286 A 382 REMARK 3 ORIGIN FOR THE GROUP (A): 14.1280 33.4760 33.3530 REMARK 3 T TENSOR REMARK 3 T11: -0.1223 T22: -0.1044 REMARK 3 T33: -0.0839 T12: 0.0086 REMARK 3 T13: 0.0235 T23: -0.0258 REMARK 3 L TENSOR REMARK 3 L11: 2.5223 L22: 4.4395 REMARK 3 L33: 5.6662 L12: -0.6574 REMARK 3 L13: 0.1625 L23: 0.9880 REMARK 3 S TENSOR REMARK 3 S11: 0.0031 S12: 0.1394 S13: 0.0306 REMARK 3 S21: -0.1710 S22: -0.1341 S23: 0.1089 REMARK 3 S31: -0.1242 S32: -0.0242 S33: 0.1310 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2FEZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JAN-06. REMARK 100 THE DEPOSITION ID IS D_1000035798. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-NOV-04; 28-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : ESRF; ESRF REMARK 200 BEAMLINE : ID14-3; BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.931; 0.9783,0.9887,0.9686 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH; MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31575 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 44.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.10 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.00 REMARK 200 R MERGE FOR SHELL (I) : 0.47000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NA-HEPES, PH 7.5, 15% PEG 4000, REMARK 280 0.2 M MAGNESIUM CHORIDE, 5 MM DITHIOTHREITOL, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 285K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 39.08600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.80700 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 70.40750 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 39.08600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.80700 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 70.40750 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 39.08600 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 41.80700 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 70.40750 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 39.08600 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 41.80700 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 70.40750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLY A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 THR A 6 REMARK 465 VAL A 7 REMARK 465 GLU A 8 REMARK 465 LYS A 9 REMARK 465 GLY A 383 REMARK 465 THR A 384 REMARK 465 HIS A 385 REMARK 465 GLY A 386 REMARK 465 GLY A 387 REMARK 465 THR A 388 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 193 CD OE1 OE2 REMARK 470 SER A 284 OG REMARK 470 GLN A 286 CG CD OE1 NE2 REMARK 470 GLN A 287 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 154 NH2 ARG A 154 2565 1.82 REMARK 500 CZ ARG A 154 NH2 ARG A 154 2565 2.01 REMARK 500 NH2 ARG A 91 OE2 GLU A 375 7555 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 61 -118.21 49.95 REMARK 500 PRO A 99 20.16 -68.04 REMARK 500 GLN A 257 53.82 37.49 REMARK 500 ASP A 321 21.43 -72.00 REMARK 500 LEU A 344 58.32 -93.89 REMARK 500 SER A 359 -77.98 -124.81 REMARK 500 CYS A 372 -114.31 53.18 REMARK 500 REMARK 500 REMARK: NULL DBREF 2FEZ A 1 388 UNP P66799 EMBR_MYCTU 1 388 SEQRES 1 A 388 MET ALA GLY SER ALA THR VAL GLU LYS ARG LEU ASP PHE SEQRES 2 A 388 GLY LEU LEU GLY PRO LEU GLN MET THR ILE ASP GLY THR SEQRES 3 A 388 PRO VAL PRO SER GLY THR PRO LYS GLN ARG ALA VAL LEU SEQRES 4 A 388 ALA MET LEU VAL ILE ASN ARG ASN ARG PRO VAL GLY VAL SEQRES 5 A 388 ASP ALA LEU ILE THR ALA LEU TRP GLU GLU TRP PRO PRO SEQRES 6 A 388 SER GLY ALA ARG ALA SER ILE HIS SER TYR VAL SER ASN SEQRES 7 A 388 LEU ARG LYS LEU LEU GLY GLY ALA GLY ILE ASP PRO ARG SEQRES 8 A 388 VAL VAL LEU ALA ALA ALA PRO PRO GLY TYR ARG LEU SER SEQRES 9 A 388 ILE PRO ASP ASN THR CYS ASP LEU GLY ARG PHE VAL ALA SEQRES 10 A 388 GLU LYS THR ALA GLY VAL HIS ALA ALA ALA ALA GLY ARG SEQRES 11 A 388 PHE GLU GLN ALA SER ARG HIS LEU SER ALA ALA LEU ARG SEQRES 12 A 388 GLU TRP ARG GLY PRO VAL LEU ASP ASP LEU ARG ASP PHE SEQRES 13 A 388 GLN PHE VAL GLU PRO PHE ALA THR ALA LEU VAL GLU ASP SEQRES 14 A 388 LYS VAL LEU ALA HIS THR ALA LYS ALA GLU ALA GLU ILE SEQRES 15 A 388 ALA CYS GLY ARG ALA SER ALA VAL ILE ALA GLU LEU GLU SEQRES 16 A 388 ALA LEU THR PHE GLU HIS PRO TYR ARG GLU PRO LEU TRP SEQRES 17 A 388 THR GLN LEU ILE THR ALA TYR TYR LEU SER ASP ARG GLN SEQRES 18 A 388 SER ASP ALA LEU GLY ALA TYR ARG ARG VAL LYS THR THR SEQRES 19 A 388 LEU ALA ASP ASP LEU GLY ILE ASP PRO GLY PRO THR LEU SEQRES 20 A 388 ARG ALA LEU ASN GLU ARG ILE LEU ARG GLN GLN PRO LEU SEQRES 21 A 388 ASP ALA LYS LYS SER ALA LYS THR THR ALA ALA GLY THR SEQRES 22 A 388 VAL THR VAL LEU ASP GLN ARG THR MET ALA SER GLY GLN SEQRES 23 A 388 GLN ALA VAL ALA TYR LEU HIS ASP ILE ALA SER GLY ARG SEQRES 24 A 388 GLY TYR PRO LEU GLN ALA ALA ALA THR ARG ILE GLY ARG SEQRES 25 A 388 LEU HIS ASP ASN ASP ILE VAL LEU ASP SER ALA ASN VAL SEQRES 26 A 388 SER ARG HIS HIS ALA VAL ILE VAL ASP THR GLY THR ASN SEQRES 27 A 388 TYR VAL ILE ASN ASP LEU ARG SER SER ASN GLY VAL HIS SEQRES 28 A 388 VAL GLN HIS GLU ARG ILE ARG SER ALA VAL THR LEU ASN SEQRES 29 A 388 ASP GLY ASP HIS ILE ARG ILE CYS ASP HIS GLU PHE THR SEQRES 30 A 388 PHE GLN ILE SER ALA GLY THR HIS GLY GLY THR FORMUL 2 HOH *240(H2 O) HELIX 1 1 THR A 32 ASN A 45 1 14 HELIX 2 2 GLY A 51 GLU A 61 1 11 HELIX 3 3 GLY A 67 GLY A 84 1 18 HELIX 4 4 GLY A 85 GLY A 87 5 3 HELIX 5 5 ASP A 89 VAL A 93 1 5 HELIX 6 6 PRO A 106 THR A 109 5 4 HELIX 7 7 CYS A 110 ALA A 128 1 19 HELIX 8 8 ARG A 130 ARG A 143 1 14 HELIX 9 9 LEU A 150 ARG A 154 5 5 HELIX 10 10 PHE A 158 CYS A 184 1 27 HELIX 11 11 ARG A 186 HIS A 201 1 16 HELIX 12 12 ARG A 204 SER A 218 1 15 HELIX 13 13 ARG A 220 GLY A 240 1 21 HELIX 14 14 GLY A 244 ARG A 256 1 13 HELIX 15 15 ASP A 261 THR A 281 1 21 SHEET 1 A 3 LEU A 11 GLY A 14 0 SHEET 2 A 3 GLN A 20 ILE A 23 -1 O THR A 22 N ASP A 12 SHEET 3 A 3 THR A 26 PRO A 27 -1 O THR A 26 N ILE A 23 SHEET 1 B 3 PRO A 49 VAL A 50 0 SHEET 2 B 3 GLY A 100 LEU A 103 -1 O TYR A 101 N VAL A 50 SHEET 3 B 3 LEU A 94 ALA A 97 -1 N ALA A 97 O GLY A 100 SHEET 1 C 6 GLY A 300 PRO A 302 0 SHEET 2 C 6 TYR A 291 ASP A 294 -1 N LEU A 292 O TYR A 301 SHEET 3 C 6 HIS A 374 GLN A 379 -1 O THR A 377 N HIS A 293 SHEET 4 C 6 HIS A 368 ILE A 371 -1 N ILE A 369 O PHE A 376 SHEET 5 C 6 HIS A 351 VAL A 352 -1 N HIS A 351 O ARG A 370 SHEET 6 C 6 GLU A 355 ARG A 356 -1 O GLU A 355 N VAL A 352 SHEET 1 D 5 ILE A 318 VAL A 319 0 SHEET 2 D 5 ALA A 307 GLY A 311 1 N ARG A 309 O ILE A 318 SHEET 3 D 5 ALA A 330 ASP A 334 -1 O ALA A 330 N ILE A 310 SHEET 4 D 5 TYR A 339 ASP A 343 -1 O VAL A 340 N VAL A 333 SHEET 5 D 5 ALA A 360 THR A 362 -1 O VAL A 361 N ILE A 341 CRYST1 78.172 83.614 140.815 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012792 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011960 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007102 0.00000