HEADER HYDROLASE 20-DEC-05 2FG0 TITLE CRYSTAL STRUCTURE OF A PUTATIVE GAMMA-D-GLUTAMYL-L-DIAMINO ACID TITLE 2 ENDOPEPTIDASE (NPUN_R0659) FROM NOSTOC PUNCTIFORME PCC 73102 AT 1.79 TITLE 3 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: COG0791: CELL WALL-ASSOCIATED HYDROLASES (INVASION- COMPND 3 ASSOCIATED PROTEINS); COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOSTOC PUNCTIFORME; SOURCE 3 ORGANISM_TAXID: 63737; SOURCE 4 STRAIN: PCC 73102; SOURCE 5 GENE: 53686717; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS NLPC/P60 FAMILY, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 7 25-JAN-23 2FG0 1 REMARK SEQADV LINK REVDAT 6 18-OCT-17 2FG0 1 REMARK REVDAT 5 13-JUL-11 2FG0 1 VERSN REVDAT 4 23-MAR-11 2FG0 1 HEADER TITLE KEYWDS REVDAT 3 10-MAR-09 2FG0 1 JRNL REVDAT 2 24-FEB-09 2FG0 1 VERSN REVDAT 1 10-JAN-06 2FG0 0 JRNL AUTH Q.XU,S.SUDEK,D.MCMULLAN,M.D.MILLER,B.GEIERSTANGER,D.H.JONES, JRNL AUTH 2 S.S.KRISHNA,G.SPRAGGON,B.BURSALAY,P.ABDUBEK,C.ACOSTA, JRNL AUTH 3 E.AMBING,T.ASTAKHOVA,H.L.AXELROD,D.CARLTON,J.CARUTHERS, JRNL AUTH 4 H.J.CHIU,T.CLAYTON,M.C.DELLER,L.DUAN,Y.ELIAS,M.A.ELSLIGER, JRNL AUTH 5 J.FEUERHELM,S.K.GRZECHNIK,J.HALE,G.WON HAN,J.HAUGEN, JRNL AUTH 6 L.JAROSZEWSKI,K.K.JIN,H.E.KLOCK,M.W.KNUTH,P.KOZBIAL,A.KUMAR, JRNL AUTH 7 D.MARCIANO,A.T.MORSE,E.NIGOGHOSSIAN,L.OKACH,S.OOMMACHEN, JRNL AUTH 8 J.PAULSEN,R.REYES,C.L.RIFE,C.V.TROUT,H.VAN DEN BEDEM, JRNL AUTH 9 D.WEEKES,A.WHITE,G.WOLF,C.ZUBIETA,K.O.HODGSON,J.WOOLEY, JRNL AUTH10 A.M.DEACON,A.GODZIK,S.A.LESLEY,I.A.WILSON JRNL TITL STRUCTURAL BASIS OF MUREIN PEPTIDE SPECIFICITY OF A JRNL TITL 2 GAMMA-D-GLUTAMYL-L-DIAMINO ACID ENDOPEPTIDASE. JRNL REF STRUCTURE V. 17 303 2009 JRNL REFN ISSN 0969-2126 JRNL PMID 19217401 JRNL DOI 10.1016/J.STR.2008.12.008 REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 68770 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.172 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3659 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.79 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4876 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.39 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE SET COUNT : 273 REMARK 3 BIN FREE R VALUE : 0.2790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3426 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 428 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.37000 REMARK 3 B22 (A**2) : 0.37000 REMARK 3 B33 (A**2) : -0.74000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.077 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.076 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.056 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.612 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.963 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3641 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3123 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4967 ; 1.513 ; 1.946 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7271 ; 0.891 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 466 ; 5.661 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 177 ;35.222 ;24.915 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 548 ;12.460 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;14.612 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 527 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4231 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 763 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 684 ; 0.214 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3296 ; 0.185 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1851 ; 0.192 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2287 ; 0.091 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 334 ; 0.160 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.224 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 40 ; 0.267 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 18 ; 0.161 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2383 ; 2.060 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 942 ; 0.495 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3624 ; 2.896 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1546 ; 5.072 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1343 ; 6.639 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 13 A 234 2 REMARK 3 1 B 13 B 234 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 1277 ; 0.10 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 A (A): 1904 ; 0.28 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 1277 ; 0.26 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1904 ; 0.91 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 90 REMARK 3 ORIGIN FOR THE GROUP (A): 1.5390 27.3290 -0.1350 REMARK 3 T TENSOR REMARK 3 T11: -0.0217 T22: 0.0178 REMARK 3 T33: -0.0224 T12: -0.0640 REMARK 3 T13: 0.0107 T23: -0.0567 REMARK 3 L TENSOR REMARK 3 L11: 1.7904 L22: 1.2285 REMARK 3 L33: 1.2286 L12: -0.5339 REMARK 3 L13: -0.5529 L23: -0.0950 REMARK 3 S TENSOR REMARK 3 S11: -0.1647 S12: 0.3686 S13: -0.2115 REMARK 3 S21: -0.1069 S22: -0.0038 S23: 0.0650 REMARK 3 S31: 0.2047 S32: -0.1508 S33: 0.1685 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 91 A 234 REMARK 3 ORIGIN FOR THE GROUP (A): 20.5560 36.8180 10.4540 REMARK 3 T TENSOR REMARK 3 T11: -0.0441 T22: -0.0521 REMARK 3 T33: -0.0321 T12: -0.0063 REMARK 3 T13: -0.0081 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 1.2847 L22: 1.0652 REMARK 3 L33: 0.8521 L12: 0.1301 REMARK 3 L13: 0.0406 L23: 0.4379 REMARK 3 S TENSOR REMARK 3 S11: -0.0947 S12: 0.0591 S13: 0.0615 REMARK 3 S21: -0.0925 S22: 0.0754 S23: -0.0348 REMARK 3 S31: 0.0267 S32: 0.0663 S33: 0.0193 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 13 B 90 REMARK 3 ORIGIN FOR THE GROUP (A): 32.5410 52.7610 46.7880 REMARK 3 T TENSOR REMARK 3 T11: -0.0104 T22: 0.0013 REMARK 3 T33: -0.0514 T12: -0.0223 REMARK 3 T13: -0.0401 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.9603 L22: 1.8830 REMARK 3 L33: 1.0011 L12: -0.7489 REMARK 3 L13: 0.3657 L23: -0.3155 REMARK 3 S TENSOR REMARK 3 S11: 0.0185 S12: -0.1203 S13: 0.0831 REMARK 3 S21: 0.2738 S22: -0.0678 S23: -0.1230 REMARK 3 S31: -0.0625 S32: 0.1112 S33: 0.0493 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 91 B 234 REMARK 3 ORIGIN FOR THE GROUP (A): 18.5120 37.0230 36.0390 REMARK 3 T TENSOR REMARK 3 T11: 0.0166 T22: -0.0256 REMARK 3 T33: -0.0230 T12: -0.0214 REMARK 3 T13: 0.0028 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 1.1170 L22: 1.5671 REMARK 3 L33: 1.3157 L12: -0.0072 REMARK 3 L13: 0.4125 L23: 0.4592 REMARK 3 S TENSOR REMARK 3 S11: 0.0474 S12: -0.1614 S13: -0.0973 REMARK 3 S21: 0.2214 S22: -0.1068 S23: 0.1613 REMARK 3 S31: 0.2405 S32: -0.1167 S33: 0.0594 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION REMARK 3 DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE REMARK 3 MSE REMARK 3 RESIDUES WAS REDUCED TO 0.7 TO ACCOUNT FOR THE REDUCED SCATTERING REMARK 3 POWER REMARK 3 DUE TO PARTIAL S-MET INCORPORATION. REMARK 3 3. THE DIFFERENCE DENSITY MAP NEAR A/B 116 IS NOISY. REMARK 4 REMARK 4 2FG0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-DEC-05. REMARK 100 THE DEPOSITION ID IS D_1000035834. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-SEP-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0163, 0.9798 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72488 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.790 REMARK 200 RESOLUTION RANGE LOW (A) : 29.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.14700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.01146 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.130 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE MODEL FROM A SECOND CRYSTAL FORM OF SE-MET CRYSTALS REMARK 200 (P 41 2 2, PDB ID 2EVR) WAS USED AS A STARTING MODEL TO SPEED UP REMARK 200 THE REFINEMENT. THE STRUCTURE CAN BE SOLVED BY SE-MAD. MORE THAN REMARK 200 90 PERCENT OF PROTEIN MODELS CAN BE AUTOMATICALLY TRACED FROM REMARK 200 EXPERIMENTAL PHASES ONLY. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4M NA3CITRATE, 0.1M HEPES, VAPOR REMARK 280 DIFFUSION, SITTING DROP, NANODROP, TEMPERATURE 277K, PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.83500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 62.54000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 62.54000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 24.41750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 62.54000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 62.54000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 73.25250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 62.54000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 62.54000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 24.41750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 62.54000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 62.54000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 73.25250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 48.83500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 VAL A 2 REMARK 465 ARG A 3 REMARK 465 LEU A 4 REMARK 465 SER A 5 REMARK 465 GLU A 6 REMARK 465 ALA A 7 REMARK 465 GLU A 8 REMARK 465 VAL A 9 REMARK 465 GLN A 10 REMARK 465 ASN A 11 REMARK 465 PRO A 12 REMARK 465 MSE B -11 REMARK 465 GLY B -10 REMARK 465 SER B -9 REMARK 465 ASP B -8 REMARK 465 LYS B -7 REMARK 465 ILE B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MSE B 1 REMARK 465 VAL B 2 REMARK 465 ARG B 3 REMARK 465 LEU B 4 REMARK 465 SER B 5 REMARK 465 GLU B 6 REMARK 465 ALA B 7 REMARK 465 GLU B 8 REMARK 465 VAL B 9 REMARK 465 GLN B 10 REMARK 465 ASN B 11 REMARK 465 PRO B 12 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 13 CG CD CE NZ REMARK 470 LYS A 106 CE NZ REMARK 470 LYS A 192 CE NZ REMARK 470 GLU A 230 CG CD OE1 OE2 REMARK 470 ARG A 233 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 234 C O REMARK 470 LYS B 13 CG CD CE NZ REMARK 470 GLN B 172 CG CD OE1 NE2 REMARK 470 LYS B 192 CE NZ REMARK 470 GLU B 230 CG CD OE1 OE2 REMARK 470 ARG B 233 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 234 C O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 14 128.29 -171.23 REMARK 500 ASN A 52 -136.37 57.64 REMARK 500 LEU A 181 -83.11 -111.35 REMARK 500 ASP A 209 -178.97 -68.08 REMARK 500 LEU B 14 130.18 -173.38 REMARK 500 ASN B 52 -129.95 64.43 REMARK 500 LEU B 181 -86.85 -111.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 235 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 235 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 236 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 359701 RELATED DB: TARGETDB DBREF 2FG0 A 1 234 GB 53686717 ZP_00105875 1 234 DBREF 2FG0 B 1 234 GB 53686717 ZP_00105875 1 234 SEQADV 2FG0 MSE A -11 GB 53686717 EXPRESSION TAG SEQADV 2FG0 GLY A -10 GB 53686717 EXPRESSION TAG SEQADV 2FG0 SER A -9 GB 53686717 EXPRESSION TAG SEQADV 2FG0 ASP A -8 GB 53686717 EXPRESSION TAG SEQADV 2FG0 LYS A -7 GB 53686717 EXPRESSION TAG SEQADV 2FG0 ILE A -6 GB 53686717 EXPRESSION TAG SEQADV 2FG0 HIS A -5 GB 53686717 EXPRESSION TAG SEQADV 2FG0 HIS A -4 GB 53686717 EXPRESSION TAG SEQADV 2FG0 HIS A -3 GB 53686717 EXPRESSION TAG SEQADV 2FG0 HIS A -2 GB 53686717 EXPRESSION TAG SEQADV 2FG0 HIS A -1 GB 53686717 EXPRESSION TAG SEQADV 2FG0 HIS A 0 GB 53686717 EXPRESSION TAG SEQADV 2FG0 MSE A 1 GB 53686717 MET 1 MODIFIED RESIDUE SEQADV 2FG0 MSE A 108 GB 53686717 MET 108 MODIFIED RESIDUE SEQADV 2FG0 MSE A 130 GB 53686717 MET 130 MODIFIED RESIDUE SEQADV 2FG0 MSE B -11 GB 53686717 EXPRESSION TAG SEQADV 2FG0 GLY B -10 GB 53686717 EXPRESSION TAG SEQADV 2FG0 SER B -9 GB 53686717 EXPRESSION TAG SEQADV 2FG0 ASP B -8 GB 53686717 EXPRESSION TAG SEQADV 2FG0 LYS B -7 GB 53686717 EXPRESSION TAG SEQADV 2FG0 ILE B -6 GB 53686717 EXPRESSION TAG SEQADV 2FG0 HIS B -5 GB 53686717 EXPRESSION TAG SEQADV 2FG0 HIS B -4 GB 53686717 EXPRESSION TAG SEQADV 2FG0 HIS B -3 GB 53686717 EXPRESSION TAG SEQADV 2FG0 HIS B -2 GB 53686717 EXPRESSION TAG SEQADV 2FG0 HIS B -1 GB 53686717 EXPRESSION TAG SEQADV 2FG0 HIS B 0 GB 53686717 EXPRESSION TAG SEQADV 2FG0 MSE B 1 GB 53686717 MET 1 MODIFIED RESIDUE SEQADV 2FG0 MSE B 108 GB 53686717 MET 108 MODIFIED RESIDUE SEQADV 2FG0 MSE B 130 GB 53686717 MET 130 MODIFIED RESIDUE SEQRES 1 A 246 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 A 246 VAL ARG LEU SER GLU ALA GLU VAL GLN ASN PRO LYS LEU SEQRES 3 A 246 GLY GLU TYR GLN CYS LEU ALA ASP LEU ASN LEU PHE ASP SEQRES 4 A 246 SER PRO GLU CYS THR ARG LEU ALA THR GLN SER ALA SER SEQRES 5 A 246 GLY ARG HIS LEU TRP VAL THR SER ASN HIS GLN ASN LEU SEQRES 6 A 246 ALA VAL GLU VAL TYR LEU CYS GLU ASP ASP TYR PRO GLY SEQRES 7 A 246 TRP LEU SER LEU SER ASP PHE ASP SER LEU GLN PRO ALA SEQRES 8 A 246 THR VAL PRO TYR GLN ALA ALA THR PHE SER GLU SER GLU SEQRES 9 A 246 ILE LYS LYS LEU LEU ALA GLU VAL ILE ALA PHE THR GLN SEQRES 10 A 246 LYS ALA MSE GLN GLN SER ASN TYR TYR LEU TRP GLY GLY SEQRES 11 A 246 THR VAL GLY PRO ASN TYR ASP CYS SER GLY LEU MSE GLN SEQRES 12 A 246 ALA ALA PHE ALA SER VAL GLY ILE TRP LEU PRO ARG ASP SEQRES 13 A 246 ALA TYR GLN GLN GLU GLY PHE THR GLN PRO ILE THR ILE SEQRES 14 A 246 ALA GLU LEU VAL ALA GLY ASP LEU VAL PHE PHE GLY THR SEQRES 15 A 246 SER GLN LYS ALA THR HIS VAL GLY LEU TYR LEU ALA ASP SEQRES 16 A 246 GLY TYR TYR ILE HIS SER SER GLY LYS ASP GLN GLY ARG SEQRES 17 A 246 ASP GLY ILE GLY ILE ASP ILE LEU SER GLU GLN GLY ASP SEQRES 18 A 246 ALA VAL SER LEU SER TYR TYR GLN GLN LEU ARG GLY ALA SEQRES 19 A 246 GLY ARG VAL PHE LYS SER TYR GLU PRO GLN ARG ARG SEQRES 1 B 246 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 B 246 VAL ARG LEU SER GLU ALA GLU VAL GLN ASN PRO LYS LEU SEQRES 3 B 246 GLY GLU TYR GLN CYS LEU ALA ASP LEU ASN LEU PHE ASP SEQRES 4 B 246 SER PRO GLU CYS THR ARG LEU ALA THR GLN SER ALA SER SEQRES 5 B 246 GLY ARG HIS LEU TRP VAL THR SER ASN HIS GLN ASN LEU SEQRES 6 B 246 ALA VAL GLU VAL TYR LEU CYS GLU ASP ASP TYR PRO GLY SEQRES 7 B 246 TRP LEU SER LEU SER ASP PHE ASP SER LEU GLN PRO ALA SEQRES 8 B 246 THR VAL PRO TYR GLN ALA ALA THR PHE SER GLU SER GLU SEQRES 9 B 246 ILE LYS LYS LEU LEU ALA GLU VAL ILE ALA PHE THR GLN SEQRES 10 B 246 LYS ALA MSE GLN GLN SER ASN TYR TYR LEU TRP GLY GLY SEQRES 11 B 246 THR VAL GLY PRO ASN TYR ASP CYS SER GLY LEU MSE GLN SEQRES 12 B 246 ALA ALA PHE ALA SER VAL GLY ILE TRP LEU PRO ARG ASP SEQRES 13 B 246 ALA TYR GLN GLN GLU GLY PHE THR GLN PRO ILE THR ILE SEQRES 14 B 246 ALA GLU LEU VAL ALA GLY ASP LEU VAL PHE PHE GLY THR SEQRES 15 B 246 SER GLN LYS ALA THR HIS VAL GLY LEU TYR LEU ALA ASP SEQRES 16 B 246 GLY TYR TYR ILE HIS SER SER GLY LYS ASP GLN GLY ARG SEQRES 17 B 246 ASP GLY ILE GLY ILE ASP ILE LEU SER GLU GLN GLY ASP SEQRES 18 B 246 ALA VAL SER LEU SER TYR TYR GLN GLN LEU ARG GLY ALA SEQRES 19 B 246 GLY ARG VAL PHE LYS SER TYR GLU PRO GLN ARG ARG MODRES 2FG0 MSE A 108 MET SELENOMETHIONINE MODRES 2FG0 MSE A 130 MET SELENOMETHIONINE MODRES 2FG0 MSE B 108 MET SELENOMETHIONINE MODRES 2FG0 MSE B 130 MET SELENOMETHIONINE HET MSE A 108 8 HET MSE A 130 8 HET MSE B 108 8 HET MSE B 130 8 HET GOL A 235 6 HET GOL A 236 6 HET GOL B 235 6 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 GOL 3(C3 H8 O3) FORMUL 6 HOH *428(H2 O) HELIX 1 1 SER A 71 ASP A 74 5 4 HELIX 2 2 SER A 89 GLN A 109 1 21 HELIX 3 3 ASP A 125 SER A 136 1 12 HELIX 4 4 ASP A 144 THR A 152 1 9 HELIX 5 5 THR A 156 LEU A 160 5 5 HELIX 6 6 ASP A 209 GLN A 217 1 9 HELIX 7 7 SER B 71 ASP B 74 5 4 HELIX 8 8 SER B 89 GLN B 109 1 21 HELIX 9 9 ASP B 125 SER B 136 1 12 HELIX 10 10 ASP B 144 THR B 152 1 9 HELIX 11 11 THR B 156 LEU B 160 5 5 HELIX 12 12 ASP B 209 GLN B 217 1 9 SHEET 1 A 5 PRO A 65 SER A 69 0 SHEET 2 A 5 ALA A 54 LEU A 59 -1 N VAL A 55 O LEU A 68 SHEET 3 A 5 HIS A 43 GLN A 51 -1 N TRP A 45 O TYR A 58 SHEET 4 A 5 GLY A 15 CYS A 19 -1 N TYR A 17 O LEU A 44 SHEET 5 A 5 LEU A 76 PRO A 78 -1 O GLN A 77 N GLN A 18 SHEET 1 B 2 LEU A 23 PHE A 26 0 SHEET 2 B 2 LEU A 34 SER A 38 -1 O SER A 38 N LEU A 23 SHEET 1 C 6 GLN A 153 ILE A 155 0 SHEET 2 C 6 LEU A 219 ARG A 224 -1 O ARG A 224 N GLN A 153 SHEET 3 C 6 LEU A 165 THR A 170 -1 N LEU A 165 O GLY A 223 SHEET 4 C 6 LYS A 173 TYR A 180 -1 O GLY A 178 N VAL A 166 SHEET 5 C 6 TYR A 185 SER A 190 -1 O ILE A 187 N LEU A 179 SHEET 6 C 6 GLY A 198 ILE A 203 -1 O GLY A 200 N HIS A 188 SHEET 1 D 5 PRO B 65 SER B 69 0 SHEET 2 D 5 ALA B 54 LEU B 59 -1 N VAL B 57 O GLY B 66 SHEET 3 D 5 HIS B 43 GLN B 51 -1 N TRP B 45 O TYR B 58 SHEET 4 D 5 GLY B 15 CYS B 19 -1 N GLY B 15 O VAL B 46 SHEET 5 D 5 LEU B 76 PRO B 78 -1 O GLN B 77 N GLN B 18 SHEET 1 E 2 LEU B 23 PHE B 26 0 SHEET 2 E 2 LEU B 34 SER B 38 -1 O ALA B 35 N LEU B 25 SHEET 1 F 6 GLN B 153 ILE B 155 0 SHEET 2 F 6 LEU B 219 ARG B 224 -1 O ARG B 224 N GLN B 153 SHEET 3 F 6 LEU B 165 GLY B 169 -1 N PHE B 167 O GLY B 221 SHEET 4 F 6 ALA B 174 TYR B 180 -1 O GLY B 178 N VAL B 166 SHEET 5 F 6 TYR B 185 SER B 190 -1 O ILE B 187 N LEU B 179 SHEET 6 F 6 GLY B 198 ILE B 203 -1 O ASP B 202 N TYR B 186 LINK C ALA A 107 N MSE A 108 1555 1555 1.32 LINK C MSE A 108 N GLN A 109 1555 1555 1.33 LINK C LEU A 129 N MSE A 130 1555 1555 1.33 LINK C MSE A 130 N GLN A 131 1555 1555 1.33 LINK C ALA B 107 N MSE B 108 1555 1555 1.33 LINK C MSE B 108 N GLN B 109 1555 1555 1.33 LINK C LEU B 129 N MSE B 130 1555 1555 1.33 LINK C MSE B 130 N GLN B 131 1555 1555 1.32 CISPEP 1 GLY A 121 PRO A 122 0 5.39 CISPEP 2 GLY B 121 PRO B 122 0 6.36 SITE 1 AC1 9 ALA A 39 THR A 119 GLN A 131 ALA A 132 SITE 2 AC1 9 HOH A 238 HOH A 274 HOH A 281 THR B 80 SITE 3 AC1 9 VAL B 81 SITE 1 AC2 9 THR A 80 VAL A 81 ALA B 39 THR B 119 SITE 2 AC2 9 GLN B 131 ALA B 132 HOH B 237 HOH B 262 SITE 3 AC2 9 HOH B 289 SITE 1 AC3 6 ARG A 196 ILE A 201 GLY A 208 ASP A 209 SITE 2 AC3 6 SER A 212 GLN B 109 CRYST1 125.080 125.080 97.670 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008000 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008000 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010240 0.00000