HEADER CONTRACTILE PROTEIN 23-DEC-05 2FH4 TITLE C-TERMINAL HALF OF GELSOLIN SOAKED IN EGTA AT PH 8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GELSOLIN; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: C-TERMINAL HALF DOMAIN; COMPND 5 SYNONYM: ACTIN-DEPOLYMERIZING FACTOR, ADF, BREVIN, AGEL; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: XL1 BLUE; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: MODIFIED PGEX-6P-1 KEYWDS GELSOLIN, EGTA, CONTRACTILE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.CHUMNARNSILPA,A.LOONCHANTA,B.XUE,H.CHOE,D.UROSEV,H.WANG, AUTHOR 2 L.D.BURTNICK,R.C.ROBINSON REVDAT 4 13-MAR-24 2FH4 1 REMARK REVDAT 3 23-MAY-18 2FH4 1 REMARK REVDAT 2 24-FEB-09 2FH4 1 VERSN REVDAT 1 13-JUN-06 2FH4 0 JRNL AUTH S.CHUMNARNSILPA,A.LOONCHANTA,B.XUE,H.CHOE,D.UROSEV,H.WANG, JRNL AUTH 2 U.LINDBERG,L.D.BURTNICK,R.C.ROBINSON JRNL TITL CALCIUM ION EXCHANGE IN CRYSTALLINE GELSOLIN JRNL REF J.MOL.BIOL. V. 357 773 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16466744 JRNL DOI 10.1016/J.JMB.2006.01.026 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.36 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 22390 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.310 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1206 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1604 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.3030 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.4430 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7325 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 67 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.551 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.420 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.959 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.921 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.825 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7668 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10405 ; 1.347 ; 1.949 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 957 ; 6.630 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 365 ;38.660 ;24.438 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1238 ;21.155 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 51 ;14.893 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1102 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5959 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3631 ; 0.235 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5026 ; 0.316 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 312 ; 0.178 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 6 ; 0.394 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 79 ; 0.221 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.222 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4875 ; 0.713 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7635 ; 1.291 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3226 ; 1.172 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2770 ; 2.012 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2FH4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-DEC-05. REMARK 100 THE DEPOSITION ID IS D_1000035871. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUL-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I711 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.970 REMARK 200 MONOCHROMATOR : SINGLE SI(111) CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55955 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.240 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, PH 4.5, MICRO BATCH UNDER REMARK 280 OIL, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.05600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.87350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.89100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 77.87350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.05600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.89100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A MONOMER. THERE ARE 3 BIOLOGICAL REMARK 300 UNITS IN THE ASYMMETRIC UNIT (CHAINS A, B AND C) REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 526 REMARK 465 GLU A 527 REMARK 465 GLY A 528 REMARK 465 GLY A 529 REMARK 465 ASP A 636 REMARK 465 ALA A 637 REMARK 465 SER A 646 REMARK 465 ASN A 647 REMARK 465 LYS A 648 REMARK 465 ILE A 649 REMARK 465 GLY A 650 REMARK 465 ARG A 651 REMARK 465 PHE A 652 REMARK 465 VAL A 653 REMARK 465 ILE A 654 REMARK 465 GLU A 655 REMARK 465 PRO A 708 REMARK 465 ALA A 709 REMARK 465 ASN A 710 REMARK 465 ARG A 711 REMARK 465 ASP A 712 REMARK 465 ARG A 713 REMARK 465 ARG A 714 REMARK 465 SER A 742 REMARK 465 VAL A 743 REMARK 465 ASP A 744 REMARK 465 PRO A 745 REMARK 465 LEU A 746 REMARK 465 ASP A 747 REMARK 465 ARG A 748 REMARK 465 ALA A 749 REMARK 465 MET A 750 REMARK 465 ALA A 751 REMARK 465 GLU A 752 REMARK 465 LEU A 753 REMARK 465 ALA A 754 REMARK 465 ALA A 755 REMARK 465 MET B 412 REMARK 465 ASP B 413 REMARK 465 HIS B 455 REMARK 465 GLY B 456 REMARK 465 GLY B 457 REMARK 465 ARG B 458 REMARK 465 SER B 525 REMARK 465 ARG B 526 REMARK 465 GLU B 527 REMARK 465 GLY B 528 REMARK 465 GLY B 529 REMARK 465 SER B 742 REMARK 465 VAL B 743 REMARK 465 ASP B 744 REMARK 465 PRO B 745 REMARK 465 LEU B 746 REMARK 465 ASP B 747 REMARK 465 ARG B 748 REMARK 465 ALA B 749 REMARK 465 MET B 750 REMARK 465 ALA B 751 REMARK 465 GLU B 752 REMARK 465 LEU B 753 REMARK 465 ALA B 754 REMARK 465 ALA B 755 REMARK 465 MET C 412 REMARK 465 ASP C 413 REMARK 465 ARG C 454 REMARK 465 HIS C 455 REMARK 465 GLY C 456 REMARK 465 GLY C 457 REMARK 465 ARG C 458 REMARK 465 GLN C 459 REMARK 465 ARG C 526 REMARK 465 GLU C 527 REMARK 465 GLY C 528 REMARK 465 GLY C 529 REMARK 465 SER C 742 REMARK 465 VAL C 743 REMARK 465 ASP C 744 REMARK 465 PRO C 745 REMARK 465 LEU C 746 REMARK 465 ASP C 747 REMARK 465 ARG C 748 REMARK 465 ALA C 749 REMARK 465 MET C 750 REMARK 465 ALA C 751 REMARK 465 GLU C 752 REMARK 465 LEU C 753 REMARK 465 ALA C 754 REMARK 465 ALA C 755 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASP C 565 CG ASP C 565 OD1 0.163 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 497 105.88 -162.18 REMARK 500 GLN A 501 109.42 -36.85 REMARK 500 THR A 531 -169.53 -69.25 REMARK 500 ALA A 534 109.57 -55.33 REMARK 500 PRO A 556 26.37 -60.72 REMARK 500 LYS A 557 -160.21 -75.92 REMARK 500 SER A 573 -85.33 -86.11 REMARK 500 GLN A 604 96.96 -65.14 REMARK 500 SER A 609 40.78 -148.30 REMARK 500 PHE A 614 -71.35 -50.39 REMARK 500 ALA A 623 97.11 -55.23 REMARK 500 TYR A 624 -158.30 -73.00 REMARK 500 LYS A 633 -79.15 -79.61 REMARK 500 LYS A 634 73.87 -62.26 REMARK 500 ASP A 665 -8.30 -52.93 REMARK 500 TRP A 677 -61.30 63.34 REMARK 500 GLN A 679 147.17 -173.48 REMARK 500 ILE A 717 67.05 -114.51 REMARK 500 ASP B 415 19.80 -67.91 REMARK 500 TYR B 453 137.60 -38.26 REMARK 500 SER B 497 123.44 -175.55 REMARK 500 PRO B 556 72.47 -66.72 REMARK 500 ARG B 599 57.93 39.22 REMARK 500 TYR B 624 -164.98 -122.21 REMARK 500 ASP B 632 107.66 -59.11 REMARK 500 LYS B 634 48.81 -72.65 REMARK 500 MET B 635 89.67 -63.10 REMARK 500 ASP B 636 -95.87 -119.34 REMARK 500 LYS B 648 -54.68 -28.75 REMARK 500 TRP B 677 -54.96 83.98 REMARK 500 PHE B 724 30.96 -146.08 REMARK 500 TYR B 740 -68.20 -9.97 REMARK 500 SER C 428 43.02 -105.67 REMARK 500 ASP C 434 103.57 -51.08 REMARK 500 GLN C 473 -62.61 -13.08 REMARK 500 HIS C 507 -74.98 -51.70 REMARK 500 SER C 510 -7.36 -55.79 REMARK 500 SER C 545 -69.43 -14.55 REMARK 500 ALA C 546 -75.24 -44.02 REMARK 500 ALA C 548 153.38 -48.83 REMARK 500 PRO C 556 37.01 -72.14 REMARK 500 VAL C 603 84.73 -169.90 REMARK 500 PRO C 611 153.86 -46.24 REMARK 500 LYS C 621 100.71 14.30 REMARK 500 PRO C 628 -73.59 -32.88 REMARK 500 MET C 635 92.34 -60.68 REMARK 500 ASP C 636 84.05 -39.36 REMARK 500 ILE C 649 11.27 -68.78 REMARK 500 ARG C 651 119.10 178.02 REMARK 500 THR C 676 42.82 -107.05 REMARK 500 REMARK 500 THIS ENTRY HAS 56 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 535 THR A 536 141.55 REMARK 500 PRO B 602 VAL B 603 148.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FH1 RELATED DB: PDB REMARK 900 THE SAME PROTEIN SOAKED IN LOW CALCIUM AT PH 4.5 REMARK 900 RELATED ID: 2FH2 RELATED DB: PDB REMARK 900 THE SAME PROTEIN SOAKED IN EGTA AT PH 4.5 REMARK 900 RELATED ID: 2FH3 RELATED DB: PDB REMARK 900 THE SAME PROTEIN SOAKED IN LOW CALCIUM AT PH 8 DBREF 2FH4 A 412 755 UNP P06396 GELS_HUMAN 439 782 DBREF 2FH4 B 412 755 UNP P06396 GELS_HUMAN 439 782 DBREF 2FH4 C 412 755 UNP P06396 GELS_HUMAN 439 782 SEQRES 1 A 344 MET ASP ASP ASP GLY THR GLY GLN LYS GLN ILE TRP ARG SEQRES 2 A 344 ILE GLU GLY SER ASN LYS VAL PRO VAL ASP PRO ALA THR SEQRES 3 A 344 TYR GLY GLN PHE TYR GLY GLY ASP SER TYR ILE ILE LEU SEQRES 4 A 344 TYR ASN TYR ARG HIS GLY GLY ARG GLN GLY GLN ILE ILE SEQRES 5 A 344 TYR ASN TRP GLN GLY ALA GLN SER THR GLN ASP GLU VAL SEQRES 6 A 344 ALA ALA SER ALA ILE LEU THR ALA GLN LEU ASP GLU GLU SEQRES 7 A 344 LEU GLY GLY THR PRO VAL GLN SER ARG VAL VAL GLN GLY SEQRES 8 A 344 LYS GLU PRO ALA HIS LEU MET SER LEU PHE GLY GLY LYS SEQRES 9 A 344 PRO MET ILE ILE TYR LYS GLY GLY THR SER ARG GLU GLY SEQRES 10 A 344 GLY GLN THR ALA PRO ALA SER THR ARG LEU PHE GLN VAL SEQRES 11 A 344 ARG ALA ASN SER ALA GLY ALA THR ARG ALA VAL GLU VAL SEQRES 12 A 344 LEU PRO LYS ALA GLY ALA LEU ASN SER ASN ASP ALA PHE SEQRES 13 A 344 VAL LEU LYS THR PRO SER ALA ALA TYR LEU TRP VAL GLY SEQRES 14 A 344 THR GLY ALA SER GLU ALA GLU LYS THR GLY ALA GLN GLU SEQRES 15 A 344 LEU LEU ARG VAL LEU ARG ALA GLN PRO VAL GLN VAL ALA SEQRES 16 A 344 GLU GLY SER GLU PRO ASP GLY PHE TRP GLU ALA LEU GLY SEQRES 17 A 344 GLY LYS ALA ALA TYR ARG THR SER PRO ARG LEU LYS ASP SEQRES 18 A 344 LYS LYS MET ASP ALA HIS PRO PRO ARG LEU PHE ALA CYS SEQRES 19 A 344 SER ASN LYS ILE GLY ARG PHE VAL ILE GLU GLU VAL PRO SEQRES 20 A 344 GLY GLU LEU MET GLN GLU ASP LEU ALA THR ASP ASP VAL SEQRES 21 A 344 MET LEU LEU ASP THR TRP ASP GLN VAL PHE VAL TRP VAL SEQRES 22 A 344 GLY LYS ASP SER GLN GLU GLU GLU LYS THR GLU ALA LEU SEQRES 23 A 344 THR SER ALA LYS ARG TYR ILE GLU THR ASP PRO ALA ASN SEQRES 24 A 344 ARG ASP ARG ARG THR PRO ILE THR VAL VAL LYS GLN GLY SEQRES 25 A 344 PHE GLU PRO PRO SER PHE VAL GLY TRP PHE LEU GLY TRP SEQRES 26 A 344 ASP ASP ASP TYR TRP SER VAL ASP PRO LEU ASP ARG ALA SEQRES 27 A 344 MET ALA GLU LEU ALA ALA SEQRES 1 B 344 MET ASP ASP ASP GLY THR GLY GLN LYS GLN ILE TRP ARG SEQRES 2 B 344 ILE GLU GLY SER ASN LYS VAL PRO VAL ASP PRO ALA THR SEQRES 3 B 344 TYR GLY GLN PHE TYR GLY GLY ASP SER TYR ILE ILE LEU SEQRES 4 B 344 TYR ASN TYR ARG HIS GLY GLY ARG GLN GLY GLN ILE ILE SEQRES 5 B 344 TYR ASN TRP GLN GLY ALA GLN SER THR GLN ASP GLU VAL SEQRES 6 B 344 ALA ALA SER ALA ILE LEU THR ALA GLN LEU ASP GLU GLU SEQRES 7 B 344 LEU GLY GLY THR PRO VAL GLN SER ARG VAL VAL GLN GLY SEQRES 8 B 344 LYS GLU PRO ALA HIS LEU MET SER LEU PHE GLY GLY LYS SEQRES 9 B 344 PRO MET ILE ILE TYR LYS GLY GLY THR SER ARG GLU GLY SEQRES 10 B 344 GLY GLN THR ALA PRO ALA SER THR ARG LEU PHE GLN VAL SEQRES 11 B 344 ARG ALA ASN SER ALA GLY ALA THR ARG ALA VAL GLU VAL SEQRES 12 B 344 LEU PRO LYS ALA GLY ALA LEU ASN SER ASN ASP ALA PHE SEQRES 13 B 344 VAL LEU LYS THR PRO SER ALA ALA TYR LEU TRP VAL GLY SEQRES 14 B 344 THR GLY ALA SER GLU ALA GLU LYS THR GLY ALA GLN GLU SEQRES 15 B 344 LEU LEU ARG VAL LEU ARG ALA GLN PRO VAL GLN VAL ALA SEQRES 16 B 344 GLU GLY SER GLU PRO ASP GLY PHE TRP GLU ALA LEU GLY SEQRES 17 B 344 GLY LYS ALA ALA TYR ARG THR SER PRO ARG LEU LYS ASP SEQRES 18 B 344 LYS LYS MET ASP ALA HIS PRO PRO ARG LEU PHE ALA CYS SEQRES 19 B 344 SER ASN LYS ILE GLY ARG PHE VAL ILE GLU GLU VAL PRO SEQRES 20 B 344 GLY GLU LEU MET GLN GLU ASP LEU ALA THR ASP ASP VAL SEQRES 21 B 344 MET LEU LEU ASP THR TRP ASP GLN VAL PHE VAL TRP VAL SEQRES 22 B 344 GLY LYS ASP SER GLN GLU GLU GLU LYS THR GLU ALA LEU SEQRES 23 B 344 THR SER ALA LYS ARG TYR ILE GLU THR ASP PRO ALA ASN SEQRES 24 B 344 ARG ASP ARG ARG THR PRO ILE THR VAL VAL LYS GLN GLY SEQRES 25 B 344 PHE GLU PRO PRO SER PHE VAL GLY TRP PHE LEU GLY TRP SEQRES 26 B 344 ASP ASP ASP TYR TRP SER VAL ASP PRO LEU ASP ARG ALA SEQRES 27 B 344 MET ALA GLU LEU ALA ALA SEQRES 1 C 344 MET ASP ASP ASP GLY THR GLY GLN LYS GLN ILE TRP ARG SEQRES 2 C 344 ILE GLU GLY SER ASN LYS VAL PRO VAL ASP PRO ALA THR SEQRES 3 C 344 TYR GLY GLN PHE TYR GLY GLY ASP SER TYR ILE ILE LEU SEQRES 4 C 344 TYR ASN TYR ARG HIS GLY GLY ARG GLN GLY GLN ILE ILE SEQRES 5 C 344 TYR ASN TRP GLN GLY ALA GLN SER THR GLN ASP GLU VAL SEQRES 6 C 344 ALA ALA SER ALA ILE LEU THR ALA GLN LEU ASP GLU GLU SEQRES 7 C 344 LEU GLY GLY THR PRO VAL GLN SER ARG VAL VAL GLN GLY SEQRES 8 C 344 LYS GLU PRO ALA HIS LEU MET SER LEU PHE GLY GLY LYS SEQRES 9 C 344 PRO MET ILE ILE TYR LYS GLY GLY THR SER ARG GLU GLY SEQRES 10 C 344 GLY GLN THR ALA PRO ALA SER THR ARG LEU PHE GLN VAL SEQRES 11 C 344 ARG ALA ASN SER ALA GLY ALA THR ARG ALA VAL GLU VAL SEQRES 12 C 344 LEU PRO LYS ALA GLY ALA LEU ASN SER ASN ASP ALA PHE SEQRES 13 C 344 VAL LEU LYS THR PRO SER ALA ALA TYR LEU TRP VAL GLY SEQRES 14 C 344 THR GLY ALA SER GLU ALA GLU LYS THR GLY ALA GLN GLU SEQRES 15 C 344 LEU LEU ARG VAL LEU ARG ALA GLN PRO VAL GLN VAL ALA SEQRES 16 C 344 GLU GLY SER GLU PRO ASP GLY PHE TRP GLU ALA LEU GLY SEQRES 17 C 344 GLY LYS ALA ALA TYR ARG THR SER PRO ARG LEU LYS ASP SEQRES 18 C 344 LYS LYS MET ASP ALA HIS PRO PRO ARG LEU PHE ALA CYS SEQRES 19 C 344 SER ASN LYS ILE GLY ARG PHE VAL ILE GLU GLU VAL PRO SEQRES 20 C 344 GLY GLU LEU MET GLN GLU ASP LEU ALA THR ASP ASP VAL SEQRES 21 C 344 MET LEU LEU ASP THR TRP ASP GLN VAL PHE VAL TRP VAL SEQRES 22 C 344 GLY LYS ASP SER GLN GLU GLU GLU LYS THR GLU ALA LEU SEQRES 23 C 344 THR SER ALA LYS ARG TYR ILE GLU THR ASP PRO ALA ASN SEQRES 24 C 344 ARG ASP ARG ARG THR PRO ILE THR VAL VAL LYS GLN GLY SEQRES 25 C 344 PHE GLU PRO PRO SER PHE VAL GLY TRP PHE LEU GLY TRP SEQRES 26 C 344 ASP ASP ASP TYR TRP SER VAL ASP PRO LEU ASP ARG ALA SEQRES 27 C 344 MET ALA GLU LEU ALA ALA FORMUL 4 HOH *67(H2 O) HELIX 1 1 THR A 472 LEU A 490 1 19 HELIX 2 2 PRO A 505 LEU A 511 1 7 HELIX 3 3 SER A 584 ARG A 599 1 16 HELIX 4 4 PRO A 611 LEU A 618 1 8 HELIX 5 5 SER A 627 ASP A 632 1 6 HELIX 6 6 MET A 662 LEU A 666 5 5 HELIX 7 7 GLN A 689 THR A 706 1 18 HELIX 8 8 PRO A 726 GLY A 731 1 6 HELIX 9 9 ASP B 434 TYR B 438 5 5 HELIX 10 10 THR B 472 GLY B 491 1 20 HELIX 11 11 PRO B 505 LEU B 511 1 7 HELIX 12 12 LYS B 557 LEU B 561 5 5 HELIX 13 13 SER B 584 LEU B 598 1 15 HELIX 14 14 PRO B 611 LEU B 618 1 8 HELIX 15 15 SER B 627 ASP B 632 1 6 HELIX 16 16 MET B 662 LEU B 666 5 5 HELIX 17 17 GLN B 689 THR B 706 1 18 HELIX 18 18 PRO B 726 GLY B 731 1 6 HELIX 19 19 ASP B 737 TRP B 741 5 5 HELIX 20 20 THR C 472 LEU C 490 1 19 HELIX 21 21 PRO C 505 SER C 510 1 6 HELIX 22 22 LEU C 511 GLY C 513 5 3 HELIX 23 23 SER C 584 ARG C 599 1 16 HELIX 24 24 PRO C 611 GLY C 619 1 9 HELIX 25 25 PRO C 628 ASP C 632 5 5 HELIX 26 26 MET C 662 LEU C 666 5 5 HELIX 27 27 GLN C 689 THR C 706 1 18 HELIX 28 28 ASP C 707 ARG C 711 5 5 HELIX 29 29 PRO C 726 GLY C 731 1 6 SHEET 1 A 5 ASN A 429 PRO A 432 0 SHEET 2 A 5 LYS A 420 GLU A 426 -1 N ARG A 424 O VAL A 431 SHEET 3 A 5 SER A 446 HIS A 455 -1 O SER A 446 N ILE A 425 SHEET 4 A 5 ARG A 458 GLN A 467 -1 O TRP A 466 N TYR A 447 SHEET 5 A 5 VAL A 495 VAL A 500 1 O VAL A 499 N ASN A 465 SHEET 1 B 7 GLN A 440 TYR A 442 0 SHEET 2 B 7 MET A 517 TYR A 520 1 O TYR A 520 N PHE A 441 SHEET 3 B 7 THR A 549 VAL A 554 1 O ALA A 551 N MET A 517 SHEET 4 B 7 LEU A 538 ALA A 543 -1 N GLN A 540 O VAL A 552 SHEET 5 B 7 ALA A 566 VAL A 568 -1 O VAL A 568 N PHE A 539 SHEET 6 B 7 LEU A 577 TRP A 578 -1 O TRP A 578 N PHE A 567 SHEET 7 B 7 GLN A 604 VAL A 605 1 O VAL A 605 N LEU A 577 SHEET 1 C 4 ARG A 641 ALA A 644 0 SHEET 2 C 4 VAL A 671 ASP A 675 -1 O LEU A 673 N PHE A 643 SHEET 3 C 4 VAL A 680 VAL A 684 -1 O TRP A 683 N MET A 672 SHEET 4 C 4 ILE A 717 LYS A 721 1 O VAL A 720 N VAL A 684 SHEET 1 D 5 ASN B 429 PRO B 432 0 SHEET 2 D 5 LYS B 420 GLU B 426 -1 N ARG B 424 O VAL B 431 SHEET 3 D 5 SER B 446 ASN B 452 -1 O ILE B 448 N TRP B 423 SHEET 4 D 5 GLN B 461 GLN B 467 -1 O TYR B 464 N ILE B 449 SHEET 5 D 5 ARG B 498 VAL B 500 1 O VAL B 499 N GLN B 467 SHEET 1 E 7 GLN B 440 TYR B 442 0 SHEET 2 E 7 MET B 517 TYR B 520 1 O TYR B 520 N PHE B 441 SHEET 3 E 7 THR B 549 VAL B 554 1 O ALA B 551 N MET B 517 SHEET 4 E 7 ARG B 537 ALA B 543 -1 N GLN B 540 O VAL B 552 SHEET 5 E 7 ALA B 566 LYS B 570 -1 O ALA B 566 N VAL B 541 SHEET 6 E 7 ALA B 575 VAL B 579 -1 O TRP B 578 N PHE B 567 SHEET 7 E 7 PRO B 602 ALA B 606 1 O VAL B 603 N ALA B 575 SHEET 1 F 5 VAL B 653 GLU B 656 0 SHEET 2 F 5 ARG B 641 SER B 646 -1 N ALA B 644 O GLU B 655 SHEET 3 F 5 VAL B 671 ASP B 675 -1 O ASP B 675 N ARG B 641 SHEET 4 F 5 VAL B 680 VAL B 684 -1 O PHE B 681 N LEU B 674 SHEET 5 F 5 ILE B 717 LYS B 721 1 O THR B 718 N VAL B 680 SHEET 1 G 5 ASN C 429 PRO C 432 0 SHEET 2 G 5 GLN C 419 GLU C 426 -1 N ARG C 424 O VAL C 431 SHEET 3 G 5 SER C 446 ASN C 452 -1 O SER C 446 N ILE C 425 SHEET 4 G 5 ILE C 462 GLN C 467 -1 O TRP C 466 N TYR C 447 SHEET 5 G 5 VAL C 495 VAL C 500 1 O VAL C 499 N ASN C 465 SHEET 1 H 7 GLN C 440 TYR C 442 0 SHEET 2 H 7 MET C 517 TYR C 520 1 O TYR C 520 N PHE C 441 SHEET 3 H 7 THR C 549 VAL C 554 1 O ALA C 551 N ILE C 519 SHEET 4 H 7 ARG C 537 ALA C 543 -1 N LEU C 538 O VAL C 554 SHEET 5 H 7 ALA C 566 LYS C 570 -1 O ALA C 566 N VAL C 541 SHEET 6 H 7 ALA C 575 VAL C 579 -1 O TYR C 576 N LEU C 569 SHEET 7 H 7 VAL C 605 ALA C 606 1 O VAL C 605 N VAL C 579 SHEET 1 I 5 VAL C 653 VAL C 657 0 SHEET 2 I 5 ARG C 641 SER C 646 -1 N ALA C 644 O GLU C 655 SHEET 3 I 5 VAL C 671 ASP C 675 -1 O ASP C 675 N ARG C 641 SHEET 4 I 5 VAL C 680 VAL C 684 -1 O TRP C 683 N MET C 672 SHEET 5 I 5 ILE C 717 LYS C 721 1 O VAL C 720 N VAL C 684 CRYST1 84.112 87.782 155.747 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011889 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011392 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006421 0.00000