data_2FIB # _entry.id 2FIB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.375 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2FIB pdb_00002fib 10.2210/pdb2fib/pdb WWPDB D_1000178092 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2FIB _pdbx_database_status.recvd_initial_deposition_date 1997-06-03 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pratt, K.P.' 1 'Cote, H.C.F.' 2 'Chung, D.W.' 3 'Stenkamp, R.E.' 4 'Davie, E.W.' 5 # _citation.id primary _citation.title ;The primary fibrin polymerization pocket: three-dimensional structure of a 30-kDa C-terminal gamma chain fragment complexed with the peptide Gly-Pro-Arg-Pro. ; _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 94 _citation.page_first 7176 _citation.page_last 7181 _citation.year 1997 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9207064 _citation.pdbx_database_id_DOI 10.1073/pnas.94.14.7176 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pratt, K.P.' 1 ? primary 'Cote, H.C.' 2 ? primary 'Chung, D.W.' 3 ? primary 'Stenkamp, R.E.' 4 ? primary 'Davie, E.W.' 5 ? # _cell.entry_id 2FIB _cell.length_a 37.330 _cell.length_b 68.200 _cell.length_c 47.600 _cell.angle_alpha 90.00 _cell.angle_beta 105.02 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2FIB _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man FIBRINOGEN 30243.422 1 ? ? 'GAMMA CHAIN, CARBOXYL TERMINAL FRAGMENT RESIDUES 143 - 411' ? 2 polymer man GLY-PRO-ARG-PRO 426.490 1 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 4 water nat water 18.015 115 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;VQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIDGSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSPTG TTEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGGDAGDAFDGFDFGDDPSDK FFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKASTPNGYDNGIIWATWKTRWYSMKKT TMKIIPFNRLTIGEGQQHHLGGAKQAGDV ; ;VQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIDGSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSPTG TTEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGGDAGDAFDGFDFGDDPSDK FFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKASTPNGYDNGIIWATWKTRWYSMKKT TMKIIPFNRLTIGEGQQHHLGGAKQAGDV ; A ? 2 'polypeptide(L)' no no GPRP GPRP B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 GLN n 1 3 ILE n 1 4 HIS n 1 5 ASP n 1 6 ILE n 1 7 THR n 1 8 GLY n 1 9 LYS n 1 10 ASP n 1 11 CYS n 1 12 GLN n 1 13 ASP n 1 14 ILE n 1 15 ALA n 1 16 ASN n 1 17 LYS n 1 18 GLY n 1 19 ALA n 1 20 LYS n 1 21 GLN n 1 22 SER n 1 23 GLY n 1 24 LEU n 1 25 TYR n 1 26 PHE n 1 27 ILE n 1 28 LYS n 1 29 PRO n 1 30 LEU n 1 31 LYS n 1 32 ALA n 1 33 ASN n 1 34 GLN n 1 35 GLN n 1 36 PHE n 1 37 LEU n 1 38 VAL n 1 39 TYR n 1 40 CYS n 1 41 GLU n 1 42 ILE n 1 43 ASP n 1 44 GLY n 1 45 SER n 1 46 GLY n 1 47 ASN n 1 48 GLY n 1 49 TRP n 1 50 THR n 1 51 VAL n 1 52 PHE n 1 53 GLN n 1 54 LYS n 1 55 ARG n 1 56 LEU n 1 57 ASP n 1 58 GLY n 1 59 SER n 1 60 VAL n 1 61 ASP n 1 62 PHE n 1 63 LYS n 1 64 LYS n 1 65 ASN n 1 66 TRP n 1 67 ILE n 1 68 GLN n 1 69 TYR n 1 70 LYS n 1 71 GLU n 1 72 GLY n 1 73 PHE n 1 74 GLY n 1 75 HIS n 1 76 LEU n 1 77 SER n 1 78 PRO n 1 79 THR n 1 80 GLY n 1 81 THR n 1 82 THR n 1 83 GLU n 1 84 PHE n 1 85 TRP n 1 86 LEU n 1 87 GLY n 1 88 ASN n 1 89 GLU n 1 90 LYS n 1 91 ILE n 1 92 HIS n 1 93 LEU n 1 94 ILE n 1 95 SER n 1 96 THR n 1 97 GLN n 1 98 SER n 1 99 ALA n 1 100 ILE n 1 101 PRO n 1 102 TYR n 1 103 ALA n 1 104 LEU n 1 105 ARG n 1 106 VAL n 1 107 GLU n 1 108 LEU n 1 109 GLU n 1 110 ASP n 1 111 TRP n 1 112 ASN n 1 113 GLY n 1 114 ARG n 1 115 THR n 1 116 SER n 1 117 THR n 1 118 ALA n 1 119 ASP n 1 120 TYR n 1 121 ALA n 1 122 MET n 1 123 PHE n 1 124 LYS n 1 125 VAL n 1 126 GLY n 1 127 PRO n 1 128 GLU n 1 129 ALA n 1 130 ASP n 1 131 LYS n 1 132 TYR n 1 133 ARG n 1 134 LEU n 1 135 THR n 1 136 TYR n 1 137 ALA n 1 138 TYR n 1 139 PHE n 1 140 ALA n 1 141 GLY n 1 142 GLY n 1 143 ASP n 1 144 ALA n 1 145 GLY n 1 146 ASP n 1 147 ALA n 1 148 PHE n 1 149 ASP n 1 150 GLY n 1 151 PHE n 1 152 ASP n 1 153 PHE n 1 154 GLY n 1 155 ASP n 1 156 ASP n 1 157 PRO n 1 158 SER n 1 159 ASP n 1 160 LYS n 1 161 PHE n 1 162 PHE n 1 163 THR n 1 164 SER n 1 165 HIS n 1 166 ASN n 1 167 GLY n 1 168 MET n 1 169 GLN n 1 170 PHE n 1 171 SER n 1 172 THR n 1 173 TRP n 1 174 ASP n 1 175 ASN n 1 176 ASP n 1 177 ASN n 1 178 ASP n 1 179 LYS n 1 180 PHE n 1 181 GLU n 1 182 GLY n 1 183 ASN n 1 184 CYS n 1 185 ALA n 1 186 GLU n 1 187 GLN n 1 188 ASP n 1 189 GLY n 1 190 SER n 1 191 GLY n 1 192 TRP n 1 193 TRP n 1 194 MET n 1 195 ASN n 1 196 LYS n 1 197 CYS n 1 198 HIS n 1 199 ALA n 1 200 GLY n 1 201 HIS n 1 202 LEU n 1 203 ASN n 1 204 GLY n 1 205 VAL n 1 206 TYR n 1 207 TYR n 1 208 GLN n 1 209 GLY n 1 210 GLY n 1 211 THR n 1 212 TYR n 1 213 SER n 1 214 LYS n 1 215 ALA n 1 216 SER n 1 217 THR n 1 218 PRO n 1 219 ASN n 1 220 GLY n 1 221 TYR n 1 222 ASP n 1 223 ASN n 1 224 GLY n 1 225 ILE n 1 226 ILE n 1 227 TRP n 1 228 ALA n 1 229 THR n 1 230 TRP n 1 231 LYS n 1 232 THR n 1 233 ARG n 1 234 TRP n 1 235 TYR n 1 236 SER n 1 237 MET n 1 238 LYS n 1 239 LYS n 1 240 THR n 1 241 THR n 1 242 MET n 1 243 LYS n 1 244 ILE n 1 245 ILE n 1 246 PRO n 1 247 PHE n 1 248 ASN n 1 249 ARG n 1 250 LEU n 1 251 THR n 1 252 ILE n 1 253 GLY n 1 254 GLU n 1 255 GLY n 1 256 GLN n 1 257 GLN n 1 258 HIS n 1 259 HIS n 1 260 LEU n 1 261 GLY n 1 262 GLY n 1 263 ALA n 1 264 LYS n 1 265 GLN n 1 266 ALA n 1 267 GLY n 1 268 ASP n 1 269 VAL n 2 1 GLY n 2 2 PRO n 2 3 ARG n 2 4 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'HUMAN FIBRINOGEN GAMMA CHAIN CDNA ENCODING VAL 143 - VAL 411' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue 'BLOOD PLASMA' _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ BLOOD _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Pichia pastoris' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4922 _entity_src_gen.host_org_genus Pichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PPIC9K _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP FIBG_HUMAN 1 P02679 1 ;MSWSLHPRNLILYFYALLFLSSTCVAYVATRDNCCILDERFGSYCPTTCGIADFLSTYQTKVDKDLQSLEDILHQVENKT SEVKQLIKAIQLTYNPDESSKPNMIDAATLKSRIMLEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQ CQEPCKDTVQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIDGSGNGWTVFQKRLDGSVDFKKNWIQYKEG FGHLSPTGTTEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGGDAGDAFDGFD FGDDPSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKASTPNGYDNGIIWATWKT RWYSMKKTTMKIIPFNRLTIGEGQQHHLGGAKQAGDV ; ? 2 PDB 2FIB 2 2FIB ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2FIB A 1 ? 269 ? P02679 169 ? 437 ? 143 411 2 2 2FIB B 1 ? 4 ? 2FIB 2 ? 5 ? 2 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2FIB _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.91 _exptl_crystal.density_percent_sol 35.52 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details 'room temp' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;PROTEIN WAS CRYSTALLIZED FROM 12% PEG8000, 70MM CACL2, 0.1 M MES, PH 6.0, 0.02%NAN3, ROOM TEMPERATURE, SITTING DROPS. THE CRYSTAL WAS SOAKED OVERNIGHT IN THE ORIGINAL SOLUTION PLUS 0.01M GLY-PRO-ARG-PRO (SIGMA), THEN BACK-SOAKED FOR 10 MINUTES., vapor diffusion - sitting drop ; # _diffrn.id 1 _diffrn.ambient_temp 300 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type RIGAKU _diffrn_detector.pdbx_collection_date 1995-09 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH2R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2FIB _reflns.observed_criterion_sigma_I 3. _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 68.2 _reflns.d_resolution_high 2.0 _reflns.number_obs 12275 _reflns.number_all ? _reflns.percent_possible_obs 76.9 _reflns.pdbx_Rmerge_I_obs 0.054 _reflns.pdbx_Rsym_value 0.052 _reflns.pdbx_netI_over_sigmaI 11. _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.01 _reflns_shell.d_res_low 2.25 _reflns_shell.percent_possible_all 61.3 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.17 _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2FIB _refine.ls_number_reflns_obs 12275 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 3.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 2.01 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.186 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.186 _refine.ls_R_factor_R_free 0.282 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 1205 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 23.5 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;MODIFIED TOPOLOGY AND PARAMETER FILES WERE CREATED SO THAT X-PLOR WOULD ACCEPT A CIS PEPTIDE BOND THAT DID NOT PRECEDE A PROLINE RESIDUE. THE PDB INPUT FILE FOR X-PLOR SHOULD SPECIFY CYS 339 AS CCY 339. THE BACKBONE ANGLES PHI AND PSI OF ASN 337 ARE STRAINED. ; _refine.pdbx_starting_model 'PDB ENTRY 1FIB' _refine.pdbx_method_to_determine_struct 'ISOMORPHOUS WITH PDB ENTRY 1FIB' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2034 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 117 _refine_hist.number_atoms_total 2152 _refine_hist.d_res_high 2.01 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.903 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 24.43 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.13 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.1 _refine_ls_shell.d_res_low 10. _refine_ls_shell.number_reflns_R_work 380 _refine_ls_shell.R_factor_R_work 0.2542 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3957 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 39 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARAM.CALCIUM TOPCISPEP.PRO 'X-RAY DIFFRACTION' 2 PARAM.TIPS3P TOPOLOGY.CALCIUM 'X-RAY DIFFRACTION' 3 PARAMCISPEP.PRO TOPOLOGY.TIPS3P 'X-RAY DIFFRACTION' # _struct.entry_id 2FIB _struct.title 'RECOMBINANT HUMAN GAMMA-FIBRINOGEN CARBOXYL TERMINAL FRAGMENT (RESIDUES 143-411) COMPLEXED TO THE PEPTIDE GLY-PRO-ARG-PRO AT PH 6.0' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2FIB _struct_keywords.pdbx_keywords 'COMPLEX (BLOOD COAGULATION/PEPTIDE)' _struct_keywords.text ;FIBRINOGEN, BLOOD COAGULATION, FIBRIN POLYMERIZATION, COMPLEX (BLOOD COAGULATION-PEPTIDE), COMPLEX (BLOOD COAGULATION-PEPTIDE) complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS A 11 ? ASN A 16 ? CYS A 153 ASN A 158 1 ? 6 HELX_P HELX_P2 2 TRP A 66 ? GLU A 71 ? TRP A 208 GLU A 213 1 ? 6 HELX_P HELX_P3 3 ASN A 88 ? SER A 95 ? ASN A 230 SER A 237 1 ? 8 HELX_P HELX_P4 4 GLN A 97 ? ALA A 99 ? GLN A 239 ALA A 241 5 ? 3 HELX_P HELX_P5 5 GLU A 128 ? ASP A 130 ? GLU A 270 ASP A 272 5 ? 3 HELX_P HELX_P6 6 ALA A 147 ? ASP A 149 ? ALA A 289 ASP A 291 5 ? 3 HELX_P HELX_P7 7 ASP A 159 ? THR A 163 ? ASP A 301 THR A 305 1 ? 5 HELX_P HELX_P8 8 CYS A 184 ? ASP A 188 ? CYS A 326 ASP A 330 1 ? 5 HELX_P HELX_P9 9 LYS A 214 ? SER A 216 ? LYS A 356 SER A 358 5 ? 3 HELX_P HELX_P10 10 PHE A 247 ? ARG A 249 ? PHE A 389 ARG A 391 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 11 SG ? ? ? 1_555 A CYS 40 SG ? ? A CYS 153 A CYS 182 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf2 disulf ? ? A CYS 184 SG ? ? ? 1_555 A CYS 197 SG ? ? A CYS 326 A CYS 339 1_555 ? ? ? ? ? ? ? 2.016 ? ? metalc1 metalc ? ? A ASP 176 OD2 ? ? ? 1_555 C CA . CA ? ? A ASP 318 A CA 412 1_555 ? ? ? ? ? ? ? 2.404 ? ? metalc2 metalc ? ? A ASP 176 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 318 A CA 412 1_555 ? ? ? ? ? ? ? 2.962 ? ? metalc3 metalc ? ? A ASP 178 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 320 A CA 412 1_555 ? ? ? ? ? ? ? 2.424 ? ? metalc4 metalc ? ? A PHE 180 O ? ? ? 1_555 C CA . CA ? ? A PHE 322 A CA 412 1_555 ? ? ? ? ? ? ? 2.202 ? ? metalc5 metalc ? ? A GLY 182 O ? ? ? 1_555 C CA . CA ? ? A GLY 324 A CA 412 1_555 ? ? ? ? ? ? ? 2.333 ? ? metalc6 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 412 A HOH 413 1_555 ? ? ? ? ? ? ? 2.542 ? ? metalc7 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 412 A HOH 414 1_555 ? ? ? ? ? ? ? 2.472 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 196 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 338 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 CYS _struct_mon_prot_cis.pdbx_label_seq_id_2 197 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 CYS _struct_mon_prot_cis.pdbx_auth_seq_id_2 339 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.53 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 138 ? GLY A 141 ? TYR A 280 GLY A 283 A 2 THR A 115 ? ALA A 121 ? THR A 257 ALA A 263 A 3 TYR A 102 ? GLU A 109 ? TYR A 244 GLU A 251 A 4 LYS A 239 ? PRO A 246 ? LYS A 381 PRO A 388 A 5 GLY A 48 ? ARG A 55 ? GLY A 190 ARG A 197 A 6 PHE A 36 ? ILE A 42 ? PHE A 178 ILE A 184 A 7 GLY A 23 ? ILE A 27 ? GLY A 165 ILE A 169 A 8 ILE A 3 ? GLY A 8 ? ILE A 145 GLY A 150 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 138 ? O TYR A 280 N ALA A 121 ? N ALA A 263 A 2 3 O SER A 116 ? O SER A 258 N LEU A 108 ? N LEU A 250 A 3 4 O ALA A 103 ? O ALA A 245 N ILE A 245 ? N ILE A 387 A 4 5 O THR A 240 ? O THR A 382 N ARG A 55 ? N ARG A 197 A 5 6 O TRP A 49 ? O TRP A 191 N GLU A 41 ? N GLU A 183 A 6 7 O PHE A 36 ? O PHE A 178 N ILE A 27 ? N ILE A 169 A 7 8 O LEU A 24 ? O LEU A 166 N HIS A 4 ? N HIS A 146 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id CA _struct_site.pdbx_auth_seq_id 412 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE CA A 412' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 176 ? ASP A 318 . ? 1_555 ? 2 AC1 6 ASP A 178 ? ASP A 320 . ? 1_555 ? 3 AC1 6 PHE A 180 ? PHE A 322 . ? 1_555 ? 4 AC1 6 GLY A 182 ? GLY A 324 . ? 1_555 ? 5 AC1 6 HOH D . ? HOH A 413 . ? 1_555 ? 6 AC1 6 HOH D . ? HOH A 414 . ? 1_555 ? # _database_PDB_matrix.entry_id 2FIB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2FIB _atom_sites.fract_transf_matrix[1][1] 0.026788 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007188 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014663 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021752 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 143 143 VAL VAL A . n A 1 2 GLN 2 144 144 GLN GLN A . n A 1 3 ILE 3 145 145 ILE ILE A . n A 1 4 HIS 4 146 146 HIS HIS A . n A 1 5 ASP 5 147 147 ASP ASP A . n A 1 6 ILE 6 148 148 ILE ILE A . n A 1 7 THR 7 149 149 THR THR A . n A 1 8 GLY 8 150 150 GLY GLY A . n A 1 9 LYS 9 151 151 LYS LYS A . n A 1 10 ASP 10 152 152 ASP ASP A . n A 1 11 CYS 11 153 153 CYS CYS A . n A 1 12 GLN 12 154 154 GLN GLN A . n A 1 13 ASP 13 155 155 ASP ASP A . n A 1 14 ILE 14 156 156 ILE ILE A . n A 1 15 ALA 15 157 157 ALA ALA A . n A 1 16 ASN 16 158 158 ASN ASN A . n A 1 17 LYS 17 159 159 LYS LYS A . n A 1 18 GLY 18 160 160 GLY GLY A . n A 1 19 ALA 19 161 161 ALA ALA A . n A 1 20 LYS 20 162 162 LYS LYS A . n A 1 21 GLN 21 163 163 GLN GLN A . n A 1 22 SER 22 164 164 SER SER A . n A 1 23 GLY 23 165 165 GLY GLY A . n A 1 24 LEU 24 166 166 LEU LEU A . n A 1 25 TYR 25 167 167 TYR TYR A . n A 1 26 PHE 26 168 168 PHE PHE A . n A 1 27 ILE 27 169 169 ILE ILE A . n A 1 28 LYS 28 170 170 LYS LYS A . n A 1 29 PRO 29 171 171 PRO PRO A . n A 1 30 LEU 30 172 172 LEU LEU A . n A 1 31 LYS 31 173 173 LYS LYS A . n A 1 32 ALA 32 174 174 ALA ALA A . n A 1 33 ASN 33 175 175 ASN ASN A . n A 1 34 GLN 34 176 176 GLN GLN A . n A 1 35 GLN 35 177 177 GLN GLN A . n A 1 36 PHE 36 178 178 PHE PHE A . n A 1 37 LEU 37 179 179 LEU LEU A . n A 1 38 VAL 38 180 180 VAL VAL A . n A 1 39 TYR 39 181 181 TYR TYR A . n A 1 40 CYS 40 182 182 CYS CYS A . n A 1 41 GLU 41 183 183 GLU GLU A . n A 1 42 ILE 42 184 184 ILE ILE A . n A 1 43 ASP 43 185 185 ASP ASP A . n A 1 44 GLY 44 186 186 GLY GLY A . n A 1 45 SER 45 187 187 SER SER A . n A 1 46 GLY 46 188 188 GLY GLY A . n A 1 47 ASN 47 189 189 ASN ASN A . n A 1 48 GLY 48 190 190 GLY GLY A . n A 1 49 TRP 49 191 191 TRP TRP A . n A 1 50 THR 50 192 192 THR THR A . n A 1 51 VAL 51 193 193 VAL VAL A . n A 1 52 PHE 52 194 194 PHE PHE A . n A 1 53 GLN 53 195 195 GLN GLN A . n A 1 54 LYS 54 196 196 LYS LYS A . n A 1 55 ARG 55 197 197 ARG ARG A . n A 1 56 LEU 56 198 198 LEU LEU A . n A 1 57 ASP 57 199 199 ASP ASP A . n A 1 58 GLY 58 200 200 GLY GLY A . n A 1 59 SER 59 201 201 SER SER A . n A 1 60 VAL 60 202 202 VAL VAL A . n A 1 61 ASP 61 203 203 ASP ASP A . n A 1 62 PHE 62 204 204 PHE PHE A . n A 1 63 LYS 63 205 205 LYS LYS A . n A 1 64 LYS 64 206 206 LYS LYS A . n A 1 65 ASN 65 207 207 ASN ASN A . n A 1 66 TRP 66 208 208 TRP TRP A . n A 1 67 ILE 67 209 209 ILE ILE A . n A 1 68 GLN 68 210 210 GLN GLN A . n A 1 69 TYR 69 211 211 TYR TYR A . n A 1 70 LYS 70 212 212 LYS LYS A . n A 1 71 GLU 71 213 213 GLU GLU A . n A 1 72 GLY 72 214 214 GLY GLY A . n A 1 73 PHE 73 215 215 PHE PHE A . n A 1 74 GLY 74 216 216 GLY GLY A . n A 1 75 HIS 75 217 217 HIS HIS A . n A 1 76 LEU 76 218 218 LEU LEU A . n A 1 77 SER 77 219 219 SER SER A . n A 1 78 PRO 78 220 220 PRO PRO A . n A 1 79 THR 79 221 221 THR THR A . n A 1 80 GLY 80 222 222 GLY GLY A . n A 1 81 THR 81 223 223 THR THR A . n A 1 82 THR 82 224 224 THR THR A . n A 1 83 GLU 83 225 225 GLU GLU A . n A 1 84 PHE 84 226 226 PHE PHE A . n A 1 85 TRP 85 227 227 TRP TRP A . n A 1 86 LEU 86 228 228 LEU LEU A . n A 1 87 GLY 87 229 229 GLY GLY A . n A 1 88 ASN 88 230 230 ASN ASN A . n A 1 89 GLU 89 231 231 GLU GLU A . n A 1 90 LYS 90 232 232 LYS LYS A . n A 1 91 ILE 91 233 233 ILE ILE A . n A 1 92 HIS 92 234 234 HIS HIS A . n A 1 93 LEU 93 235 235 LEU LEU A . n A 1 94 ILE 94 236 236 ILE ILE A . n A 1 95 SER 95 237 237 SER SER A . n A 1 96 THR 96 238 238 THR THR A . n A 1 97 GLN 97 239 239 GLN GLN A . n A 1 98 SER 98 240 240 SER SER A . n A 1 99 ALA 99 241 241 ALA ALA A . n A 1 100 ILE 100 242 242 ILE ILE A . n A 1 101 PRO 101 243 243 PRO PRO A . n A 1 102 TYR 102 244 244 TYR TYR A . n A 1 103 ALA 103 245 245 ALA ALA A . n A 1 104 LEU 104 246 246 LEU LEU A . n A 1 105 ARG 105 247 247 ARG ARG A . n A 1 106 VAL 106 248 248 VAL VAL A . n A 1 107 GLU 107 249 249 GLU GLU A . n A 1 108 LEU 108 250 250 LEU LEU A . n A 1 109 GLU 109 251 251 GLU GLU A . n A 1 110 ASP 110 252 252 ASP ASP A . n A 1 111 TRP 111 253 253 TRP TRP A . n A 1 112 ASN 112 254 254 ASN ASN A . n A 1 113 GLY 113 255 255 GLY GLY A . n A 1 114 ARG 114 256 256 ARG ARG A . n A 1 115 THR 115 257 257 THR THR A . n A 1 116 SER 116 258 258 SER SER A . n A 1 117 THR 117 259 259 THR THR A . n A 1 118 ALA 118 260 260 ALA ALA A . n A 1 119 ASP 119 261 261 ASP ASP A . n A 1 120 TYR 120 262 262 TYR TYR A . n A 1 121 ALA 121 263 263 ALA ALA A . n A 1 122 MET 122 264 264 MET MET A . n A 1 123 PHE 123 265 265 PHE PHE A . n A 1 124 LYS 124 266 266 LYS LYS A . n A 1 125 VAL 125 267 267 VAL VAL A . n A 1 126 GLY 126 268 268 GLY GLY A . n A 1 127 PRO 127 269 269 PRO PRO A . n A 1 128 GLU 128 270 270 GLU GLU A . n A 1 129 ALA 129 271 271 ALA ALA A . n A 1 130 ASP 130 272 272 ASP ASP A . n A 1 131 LYS 131 273 273 LYS LYS A . n A 1 132 TYR 132 274 274 TYR TYR A . n A 1 133 ARG 133 275 275 ARG ARG A . n A 1 134 LEU 134 276 276 LEU LEU A . n A 1 135 THR 135 277 277 THR THR A . n A 1 136 TYR 136 278 278 TYR TYR A . n A 1 137 ALA 137 279 279 ALA ALA A . n A 1 138 TYR 138 280 280 TYR TYR A . n A 1 139 PHE 139 281 281 PHE PHE A . n A 1 140 ALA 140 282 282 ALA ALA A . n A 1 141 GLY 141 283 283 GLY GLY A . n A 1 142 GLY 142 284 284 GLY GLY A . n A 1 143 ASP 143 285 285 ASP ASP A . n A 1 144 ALA 144 286 286 ALA ALA A . n A 1 145 GLY 145 287 287 GLY GLY A . n A 1 146 ASP 146 288 288 ASP ASP A . n A 1 147 ALA 147 289 289 ALA ALA A . n A 1 148 PHE 148 290 290 PHE PHE A . n A 1 149 ASP 149 291 291 ASP ASP A . n A 1 150 GLY 150 292 292 GLY GLY A . n A 1 151 PHE 151 293 293 PHE PHE A . n A 1 152 ASP 152 294 294 ASP ASP A . n A 1 153 PHE 153 295 295 PHE PHE A . n A 1 154 GLY 154 296 296 GLY GLY A . n A 1 155 ASP 155 297 297 ASP ASP A . n A 1 156 ASP 156 298 298 ASP ASP A . n A 1 157 PRO 157 299 299 PRO PRO A . n A 1 158 SER 158 300 300 SER SER A . n A 1 159 ASP 159 301 301 ASP ASP A . n A 1 160 LYS 160 302 302 LYS LYS A . n A 1 161 PHE 161 303 303 PHE PHE A . n A 1 162 PHE 162 304 304 PHE PHE A . n A 1 163 THR 163 305 305 THR THR A . n A 1 164 SER 164 306 306 SER SER A . n A 1 165 HIS 165 307 307 HIS HIS A . n A 1 166 ASN 166 308 308 ASN ASN A . n A 1 167 GLY 167 309 309 GLY GLY A . n A 1 168 MET 168 310 310 MET MET A . n A 1 169 GLN 169 311 311 GLN GLN A . n A 1 170 PHE 170 312 312 PHE PHE A . n A 1 171 SER 171 313 313 SER SER A . n A 1 172 THR 172 314 314 THR THR A . n A 1 173 TRP 173 315 315 TRP TRP A . n A 1 174 ASP 174 316 316 ASP ASP A . n A 1 175 ASN 175 317 317 ASN ASN A . n A 1 176 ASP 176 318 318 ASP ASP A . n A 1 177 ASN 177 319 319 ASN ASN A . n A 1 178 ASP 178 320 320 ASP ASP A . n A 1 179 LYS 179 321 321 LYS LYS A . n A 1 180 PHE 180 322 322 PHE PHE A . n A 1 181 GLU 181 323 323 GLU GLU A . n A 1 182 GLY 182 324 324 GLY GLY A . n A 1 183 ASN 183 325 325 ASN ASN A . n A 1 184 CYS 184 326 326 CYS CYS A . n A 1 185 ALA 185 327 327 ALA ALA A . n A 1 186 GLU 186 328 328 GLU GLU A . n A 1 187 GLN 187 329 329 GLN GLN A . n A 1 188 ASP 188 330 330 ASP ASP A . n A 1 189 GLY 189 331 331 GLY GLY A . n A 1 190 SER 190 332 332 SER SER A . n A 1 191 GLY 191 333 333 GLY GLY A . n A 1 192 TRP 192 334 334 TRP TRP A . n A 1 193 TRP 193 335 335 TRP TRP A . n A 1 194 MET 194 336 336 MET MET A . n A 1 195 ASN 195 337 337 ASN ASN A . n A 1 196 LYS 196 338 338 LYS LYS A . n A 1 197 CYS 197 339 339 CYS CYS A . n A 1 198 HIS 198 340 340 HIS HIS A . n A 1 199 ALA 199 341 341 ALA ALA A . n A 1 200 GLY 200 342 342 GLY GLY A . n A 1 201 HIS 201 343 343 HIS HIS A . n A 1 202 LEU 202 344 344 LEU LEU A . n A 1 203 ASN 203 345 345 ASN ASN A . n A 1 204 GLY 204 346 346 GLY GLY A . n A 1 205 VAL 205 347 347 VAL VAL A . n A 1 206 TYR 206 348 348 TYR TYR A . n A 1 207 TYR 207 349 349 TYR TYR A . n A 1 208 GLN 208 350 350 GLN GLN A . n A 1 209 GLY 209 351 351 GLY GLY A . n A 1 210 GLY 210 352 352 GLY GLY A . n A 1 211 THR 211 353 353 THR THR A . n A 1 212 TYR 212 354 354 TYR TYR A . n A 1 213 SER 213 355 355 SER SER A . n A 1 214 LYS 214 356 356 LYS LYS A . n A 1 215 ALA 215 357 357 ALA ALA A . n A 1 216 SER 216 358 358 SER SER A . n A 1 217 THR 217 359 359 THR THR A . n A 1 218 PRO 218 360 360 PRO PRO A . n A 1 219 ASN 219 361 361 ASN ASN A . n A 1 220 GLY 220 362 362 GLY GLY A . n A 1 221 TYR 221 363 363 TYR TYR A . n A 1 222 ASP 222 364 364 ASP ASP A . n A 1 223 ASN 223 365 365 ASN ASN A . n A 1 224 GLY 224 366 366 GLY GLY A . n A 1 225 ILE 225 367 367 ILE ILE A . n A 1 226 ILE 226 368 368 ILE ILE A . n A 1 227 TRP 227 369 369 TRP TRP A . n A 1 228 ALA 228 370 370 ALA ALA A . n A 1 229 THR 229 371 371 THR THR A . n A 1 230 TRP 230 372 372 TRP TRP A . n A 1 231 LYS 231 373 373 LYS LYS A . n A 1 232 THR 232 374 374 THR THR A . n A 1 233 ARG 233 375 375 ARG ARG A . n A 1 234 TRP 234 376 376 TRP TRP A . n A 1 235 TYR 235 377 377 TYR TYR A . n A 1 236 SER 236 378 378 SER SER A . n A 1 237 MET 237 379 379 MET MET A . n A 1 238 LYS 238 380 380 LYS LYS A . n A 1 239 LYS 239 381 381 LYS LYS A . n A 1 240 THR 240 382 382 THR THR A . n A 1 241 THR 241 383 383 THR THR A . n A 1 242 MET 242 384 384 MET MET A . n A 1 243 LYS 243 385 385 LYS LYS A . n A 1 244 ILE 244 386 386 ILE ILE A . n A 1 245 ILE 245 387 387 ILE ILE A . n A 1 246 PRO 246 388 388 PRO PRO A . n A 1 247 PHE 247 389 389 PHE PHE A . n A 1 248 ASN 248 390 390 ASN ASN A . n A 1 249 ARG 249 391 391 ARG ARG A . n A 1 250 LEU 250 392 392 LEU LEU A . n A 1 251 THR 251 393 ? ? ? A . n A 1 252 ILE 252 394 ? ? ? A . n A 1 253 GLY 253 395 ? ? ? A . n A 1 254 GLU 254 396 ? ? ? A . n A 1 255 GLY 255 397 ? ? ? A . n A 1 256 GLN 256 398 ? ? ? A . n A 1 257 GLN 257 399 ? ? ? A . n A 1 258 HIS 258 400 ? ? ? A . n A 1 259 HIS 259 401 ? ? ? A . n A 1 260 LEU 260 402 ? ? ? A . n A 1 261 GLY 261 403 ? ? ? A . n A 1 262 GLY 262 404 ? ? ? A . n A 1 263 ALA 263 405 ? ? ? A . n A 1 264 LYS 264 406 ? ? ? A . n A 1 265 GLN 265 407 ? ? ? A . n A 1 266 ALA 266 408 ? ? ? A . n A 1 267 GLY 267 409 ? ? ? A . n A 1 268 ASP 268 410 ? ? ? A . n A 1 269 VAL 269 411 ? ? ? A . n B 2 1 GLY 1 2 2 GLY GLY B . n B 2 2 PRO 2 3 3 PRO PRO B . n B 2 3 ARG 3 4 4 ARG ARG B . n B 2 4 PRO 4 5 5 PRO PRO B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA 1 412 400 CA CA A . D 4 HOH 1 413 401 HOH HOH A . D 4 HOH 2 414 402 HOH HOH A . D 4 HOH 3 415 403 HOH HOH A . D 4 HOH 4 416 404 HOH HOH A . D 4 HOH 5 417 405 HOH HOH A . D 4 HOH 6 418 406 HOH HOH A . D 4 HOH 7 419 407 HOH HOH A . D 4 HOH 8 420 408 HOH HOH A . D 4 HOH 9 421 409 HOH HOH A . D 4 HOH 10 422 410 HOH HOH A . D 4 HOH 11 423 411 HOH HOH A . D 4 HOH 12 424 412 HOH HOH A . D 4 HOH 13 425 413 HOH HOH A . D 4 HOH 14 426 414 HOH HOH A . D 4 HOH 15 427 415 HOH HOH A . D 4 HOH 16 428 416 HOH HOH A . D 4 HOH 17 429 417 HOH HOH A . D 4 HOH 18 430 418 HOH HOH A . D 4 HOH 19 431 419 HOH HOH A . D 4 HOH 20 432 420 HOH HOH A . D 4 HOH 21 433 421 HOH HOH A . D 4 HOH 22 434 422 HOH HOH A . D 4 HOH 23 435 423 HOH HOH A . D 4 HOH 24 436 424 HOH HOH A . D 4 HOH 25 437 425 HOH HOH A . D 4 HOH 26 438 426 HOH HOH A . D 4 HOH 27 439 427 HOH HOH A . D 4 HOH 28 440 428 HOH HOH A . D 4 HOH 29 441 429 HOH HOH A . D 4 HOH 30 442 430 HOH HOH A . D 4 HOH 31 443 431 HOH HOH A . D 4 HOH 32 444 432 HOH HOH A . D 4 HOH 33 445 433 HOH HOH A . D 4 HOH 34 446 434 HOH HOH A . D 4 HOH 35 447 435 HOH HOH A . D 4 HOH 36 448 436 HOH HOH A . D 4 HOH 37 449 437 HOH HOH A . D 4 HOH 38 450 438 HOH HOH A . D 4 HOH 39 451 439 HOH HOH A . D 4 HOH 40 452 441 HOH HOH A . D 4 HOH 41 453 442 HOH HOH A . D 4 HOH 42 454 443 HOH HOH A . D 4 HOH 43 455 444 HOH HOH A . D 4 HOH 44 456 445 HOH HOH A . D 4 HOH 45 457 446 HOH HOH A . D 4 HOH 46 458 447 HOH HOH A . D 4 HOH 47 459 448 HOH HOH A . D 4 HOH 48 460 449 HOH HOH A . D 4 HOH 49 461 450 HOH HOH A . D 4 HOH 50 462 451 HOH HOH A . D 4 HOH 51 463 452 HOH HOH A . D 4 HOH 52 464 453 HOH HOH A . D 4 HOH 53 465 454 HOH HOH A . D 4 HOH 54 466 455 HOH HOH A . D 4 HOH 55 467 456 HOH HOH A . D 4 HOH 56 468 457 HOH HOH A . D 4 HOH 57 469 458 HOH HOH A . D 4 HOH 58 470 459 HOH HOH A . D 4 HOH 59 471 460 HOH HOH A . D 4 HOH 60 472 461 HOH HOH A . D 4 HOH 61 473 462 HOH HOH A . D 4 HOH 62 474 463 HOH HOH A . D 4 HOH 63 475 464 HOH HOH A . D 4 HOH 64 476 465 HOH HOH A . D 4 HOH 65 477 466 HOH HOH A . D 4 HOH 66 478 467 HOH HOH A . D 4 HOH 67 479 468 HOH HOH A . D 4 HOH 68 480 469 HOH HOH A . D 4 HOH 69 481 470 HOH HOH A . D 4 HOH 70 482 471 HOH HOH A . D 4 HOH 71 483 472 HOH HOH A . D 4 HOH 72 484 473 HOH HOH A . D 4 HOH 73 485 474 HOH HOH A . D 4 HOH 74 486 475 HOH HOH A . D 4 HOH 75 487 476 HOH HOH A . D 4 HOH 76 488 477 HOH HOH A . D 4 HOH 77 489 478 HOH HOH A . D 4 HOH 78 490 479 HOH HOH A . D 4 HOH 79 491 480 HOH HOH A . D 4 HOH 80 492 481 HOH HOH A . D 4 HOH 81 493 482 HOH HOH A . D 4 HOH 82 494 483 HOH HOH A . D 4 HOH 83 495 484 HOH HOH A . D 4 HOH 84 496 485 HOH HOH A . D 4 HOH 85 497 486 HOH HOH A . D 4 HOH 86 498 487 HOH HOH A . D 4 HOH 87 499 488 HOH HOH A . D 4 HOH 88 500 489 HOH HOH A . D 4 HOH 89 501 490 HOH HOH A . D 4 HOH 90 502 491 HOH HOH A . D 4 HOH 91 503 492 HOH HOH A . D 4 HOH 92 504 493 HOH HOH A . D 4 HOH 93 505 494 HOH HOH A . D 4 HOH 94 506 495 HOH HOH A . D 4 HOH 95 507 496 HOH HOH A . D 4 HOH 96 508 497 HOH HOH A . D 4 HOH 97 509 498 HOH HOH A . D 4 HOH 98 510 499 HOH HOH A . D 4 HOH 99 511 500 HOH HOH A . D 4 HOH 100 512 501 HOH HOH A . D 4 HOH 101 513 502 HOH HOH A . D 4 HOH 102 514 503 HOH HOH A . D 4 HOH 103 515 504 HOH HOH A . D 4 HOH 104 516 505 HOH HOH A . D 4 HOH 105 517 506 HOH HOH A . D 4 HOH 106 518 507 HOH HOH A . D 4 HOH 107 519 508 HOH HOH A . D 4 HOH 108 520 509 HOH HOH A . D 4 HOH 109 521 510 HOH HOH A . D 4 HOH 110 522 511 HOH HOH A . D 4 HOH 111 523 512 HOH HOH A . D 4 HOH 112 524 513 HOH HOH A . D 4 HOH 113 525 514 HOH HOH A . D 4 HOH 114 526 515 HOH HOH A . E 4 HOH 1 440 440 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 770 ? 1 MORE -13 ? 1 'SSA (A^2)' 10460 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 176 ? A ASP 318 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 OD1 ? A ASP 176 ? A ASP 318 ? 1_555 46.1 ? 2 OD2 ? A ASP 176 ? A ASP 318 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 OD1 ? A ASP 178 ? A ASP 320 ? 1_555 103.1 ? 3 OD1 ? A ASP 176 ? A ASP 318 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 OD1 ? A ASP 178 ? A ASP 320 ? 1_555 62.3 ? 4 OD2 ? A ASP 176 ? A ASP 318 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 O ? A PHE 180 ? A PHE 322 ? 1_555 161.0 ? 5 OD1 ? A ASP 176 ? A ASP 318 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 O ? A PHE 180 ? A PHE 322 ? 1_555 137.9 ? 6 OD1 ? A ASP 178 ? A ASP 320 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 O ? A PHE 180 ? A PHE 322 ? 1_555 75.7 ? 7 OD2 ? A ASP 176 ? A ASP 318 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 O ? A GLY 182 ? A GLY 324 ? 1_555 81.2 ? 8 OD1 ? A ASP 176 ? A ASP 318 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 O ? A GLY 182 ? A GLY 324 ? 1_555 109.1 ? 9 OD1 ? A ASP 178 ? A ASP 320 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 O ? A GLY 182 ? A GLY 324 ? 1_555 101.6 ? 10 O ? A PHE 180 ? A PHE 322 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 O ? A GLY 182 ? A GLY 324 ? 1_555 80.5 ? 11 OD2 ? A ASP 176 ? A ASP 318 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 O ? D HOH . ? A HOH 413 ? 1_555 108.1 ? 12 OD1 ? A ASP 176 ? A ASP 318 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 O ? D HOH . ? A HOH 413 ? 1_555 75.4 ? 13 OD1 ? A ASP 178 ? A ASP 320 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 O ? D HOH . ? A HOH 413 ? 1_555 71.3 ? 14 O ? A PHE 180 ? A PHE 322 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 O ? D HOH . ? A HOH 413 ? 1_555 89.6 ? 15 O ? A GLY 182 ? A GLY 324 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 O ? D HOH . ? A HOH 413 ? 1_555 169.1 ? 16 OD2 ? A ASP 176 ? A ASP 318 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 O ? D HOH . ? A HOH 414 ? 1_555 81.0 ? 17 OD1 ? A ASP 176 ? A ASP 318 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 O ? D HOH . ? A HOH 414 ? 1_555 110.7 ? 18 OD1 ? A ASP 178 ? A ASP 320 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 O ? D HOH . ? A HOH 414 ? 1_555 158.0 ? 19 O ? A PHE 180 ? A PHE 322 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 O ? D HOH . ? A HOH 414 ? 1_555 107.4 ? 20 O ? A GLY 182 ? A GLY 324 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 O ? D HOH . ? A HOH 414 ? 1_555 100.4 ? 21 O ? D HOH . ? A HOH 413 ? 1_555 CA ? C CA . ? A CA 412 ? 1_555 O ? D HOH . ? A HOH 414 ? 1_555 86.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-10-15 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_initial_refinement_model 3 4 'Structure model' pdbx_struct_conn_angle 4 4 'Structure model' struct_conn 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 29 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 30 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 31 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal RIGAKU 'data collection' SOFTWARE ? 1 RIGAKU 'data reduction' SOFTWARE ? 2 X-PLOR 'model building' 3.1 ? 3 XTALVIEW refinement . ? 4 X-PLOR refinement 3.1 ? 5 RIGAKU 'data scaling' . ? 6 X-PLOR phasing 3.1 ? 7 # _pdbx_entry_details.entry_id 2FIB _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;NO DENSITY FOR RESIDUES BEYOND LEU 392 WAS OBSERVED. MASS SPECTROMETRY SHOWED HETEROGENEITY AT THE C-TERMINUS. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 144 ? ? -167.07 80.26 2 1 LEU A 198 ? ? -157.00 -18.44 3 1 ASP A 199 ? ? -152.07 -1.40 4 1 ASP A 288 ? ? -101.99 79.29 5 1 ASN A 317 ? ? -164.82 79.49 6 1 ASN A 337 ? ? -112.52 -97.35 7 1 LYS A 338 ? ? -157.46 63.21 8 1 SER A 358 ? ? -56.60 -5.27 9 1 PRO A 360 ? ? -38.92 -37.62 10 1 ASN A 361 ? ? -98.91 34.39 11 1 PRO B 3 ? ? -79.85 -168.90 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR 393 ? A THR 251 2 1 Y 1 A ILE 394 ? A ILE 252 3 1 Y 1 A GLY 395 ? A GLY 253 4 1 Y 1 A GLU 396 ? A GLU 254 5 1 Y 1 A GLY 397 ? A GLY 255 6 1 Y 1 A GLN 398 ? A GLN 256 7 1 Y 1 A GLN 399 ? A GLN 257 8 1 Y 1 A HIS 400 ? A HIS 258 9 1 Y 1 A HIS 401 ? A HIS 259 10 1 Y 1 A LEU 402 ? A LEU 260 11 1 Y 1 A GLY 403 ? A GLY 261 12 1 Y 1 A GLY 404 ? A GLY 262 13 1 Y 1 A ALA 405 ? A ALA 263 14 1 Y 1 A LYS 406 ? A LYS 264 15 1 Y 1 A GLN 407 ? A GLN 265 16 1 Y 1 A ALA 408 ? A ALA 266 17 1 Y 1 A GLY 409 ? A GLY 267 18 1 Y 1 A ASP 410 ? A ASP 268 19 1 Y 1 A VAL 411 ? A VAL 269 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CALCIUM ION' CA 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1FIB _pdbx_initial_refinement_model.details 'PDB ENTRY 1FIB' #