data_2FLL # _entry.id 2FLL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2FLL pdb_00002fll 10.2210/pdb2fll/pdb NDB PD0777 ? ? RCSB RCSB036024 ? ? WWPDB D_1000036024 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1T3N 'ternary complex of Pol iota with DNA and dTTP (space group P65)' unspecified PDB 2AZL 'ternary complex of Pol iota with DNA and dCTP' unspecified PDB 2FLN 'binary complex of catalytic core of human DNA polymerase iota with DNA (template A)' unspecified PDB 2FLP 'binary complex of the catalytic core of human dna polymerase iota with DNA (template G)' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2FLL _pdbx_database_status.recvd_initial_deposition_date 2006-01-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nair, D.T.' 1 'Johnson, R.E.' 2 'Prakash, L.' 3 'Prakash, S.' 4 'Aggarwal, A.K.' 5 # _citation.id primary _citation.title ;An incoming nucleotide imposes an anti to syn conformational change on the templating purine in the human DNA polymerase-iota active site. ; _citation.journal_abbrev Structure _citation.journal_volume 14 _citation.page_first 749 _citation.page_last 755 _citation.year 2006 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16615915 _citation.pdbx_database_id_DOI 10.1016/j.str.2006.01.010 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nair, D.T.' 1 ? primary 'Johnson, R.E.' 2 ? primary 'Prakash, L.' 3 ? primary 'Prakash, S.' 4 ? primary 'Aggarwal, A.K.' 5 ? # _cell.entry_id 2FLL _cell.length_a 98.329 _cell.length_b 98.329 _cell.length_c 202.186 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2FLL _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'DNA primer strand' 2091.414 1 ? ? ? ? 2 polymer syn 'DNA template strand' 3340.183 1 ? ? ? ? 3 polymer man 'DNA polymerase iota' 47027.344 1 2.7.7.7 ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 5 non-polymer syn "THYMIDINE-5'-TRIPHOSPHATE" 482.168 1 ? ? ? ? 6 water nat water 18.015 91 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'RAD30 homolog B, Eta2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DA)(DG)(DG)(DA)(DC)(DC)(DOC)' AGGACCC P ? 2 polydeoxyribonucleotide no no '(DT)(DC)(DT)(DA)(DG)(DG)(DG)(DT)(DC)(DC)(DT)' TCTAGGGTCCT T ? 3 'polypeptide(L)' no no ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DG n 1 3 DG n 1 4 DA n 1 5 DC n 1 6 DC n 1 7 DOC n 2 1 DT n 2 2 DC n 2 3 DT n 2 4 DA n 2 5 DG n 2 6 DG n 2 7 DG n 2 8 DT n 2 9 DC n 2 10 DC n 2 11 DT n 3 1 MET n 3 2 GLU n 3 3 LEU n 3 4 ALA n 3 5 ASP n 3 6 VAL n 3 7 GLY n 3 8 ALA n 3 9 ALA n 3 10 ALA n 3 11 SER n 3 12 SER n 3 13 GLN n 3 14 GLY n 3 15 VAL n 3 16 HIS n 3 17 ASP n 3 18 GLN n 3 19 VAL n 3 20 LEU n 3 21 PRO n 3 22 THR n 3 23 PRO n 3 24 ASN n 3 25 ALA n 3 26 SER n 3 27 SER n 3 28 ARG n 3 29 VAL n 3 30 ILE n 3 31 VAL n 3 32 HIS n 3 33 VAL n 3 34 ASP n 3 35 LEU n 3 36 ASP n 3 37 CYS n 3 38 PHE n 3 39 TYR n 3 40 ALA n 3 41 GLN n 3 42 VAL n 3 43 GLU n 3 44 MET n 3 45 ILE n 3 46 SER n 3 47 ASN n 3 48 PRO n 3 49 GLU n 3 50 LEU n 3 51 LYS n 3 52 ASP n 3 53 LYS n 3 54 PRO n 3 55 LEU n 3 56 GLY n 3 57 VAL n 3 58 GLN n 3 59 GLN n 3 60 LYS n 3 61 TYR n 3 62 LEU n 3 63 VAL n 3 64 VAL n 3 65 THR n 3 66 CYS n 3 67 ASN n 3 68 TYR n 3 69 GLU n 3 70 ALA n 3 71 ARG n 3 72 LYS n 3 73 LEU n 3 74 GLY n 3 75 VAL n 3 76 LYS n 3 77 LYS n 3 78 LEU n 3 79 MET n 3 80 ASN n 3 81 VAL n 3 82 ARG n 3 83 ASP n 3 84 ALA n 3 85 LYS n 3 86 GLU n 3 87 LYS n 3 88 CYS n 3 89 PRO n 3 90 GLN n 3 91 LEU n 3 92 VAL n 3 93 LEU n 3 94 VAL n 3 95 ASN n 3 96 GLY n 3 97 GLU n 3 98 ASP n 3 99 LEU n 3 100 THR n 3 101 ARG n 3 102 TYR n 3 103 ARG n 3 104 GLU n 3 105 MET n 3 106 SER n 3 107 TYR n 3 108 LYS n 3 109 VAL n 3 110 THR n 3 111 GLU n 3 112 LEU n 3 113 LEU n 3 114 GLU n 3 115 GLU n 3 116 PHE n 3 117 SER n 3 118 PRO n 3 119 VAL n 3 120 VAL n 3 121 GLU n 3 122 ARG n 3 123 LEU n 3 124 GLY n 3 125 PHE n 3 126 ASP n 3 127 GLU n 3 128 ASN n 3 129 PHE n 3 130 VAL n 3 131 ASP n 3 132 LEU n 3 133 THR n 3 134 GLU n 3 135 MET n 3 136 VAL n 3 137 GLU n 3 138 LYS n 3 139 ARG n 3 140 LEU n 3 141 GLN n 3 142 GLN n 3 143 LEU n 3 144 GLN n 3 145 SER n 3 146 ASP n 3 147 GLU n 3 148 LEU n 3 149 SER n 3 150 ALA n 3 151 VAL n 3 152 THR n 3 153 VAL n 3 154 SER n 3 155 GLY n 3 156 HIS n 3 157 VAL n 3 158 TYR n 3 159 ASN n 3 160 ASN n 3 161 GLN n 3 162 SER n 3 163 ILE n 3 164 ASN n 3 165 LEU n 3 166 LEU n 3 167 ASP n 3 168 VAL n 3 169 LEU n 3 170 HIS n 3 171 ILE n 3 172 ARG n 3 173 LEU n 3 174 LEU n 3 175 VAL n 3 176 GLY n 3 177 SER n 3 178 GLN n 3 179 ILE n 3 180 ALA n 3 181 ALA n 3 182 GLU n 3 183 MET n 3 184 ARG n 3 185 GLU n 3 186 ALA n 3 187 MET n 3 188 TYR n 3 189 ASN n 3 190 GLN n 3 191 LEU n 3 192 GLY n 3 193 LEU n 3 194 THR n 3 195 GLY n 3 196 CYS n 3 197 ALA n 3 198 GLY n 3 199 VAL n 3 200 ALA n 3 201 SER n 3 202 ASN n 3 203 LYS n 3 204 LEU n 3 205 LEU n 3 206 ALA n 3 207 LYS n 3 208 LEU n 3 209 VAL n 3 210 SER n 3 211 GLY n 3 212 VAL n 3 213 PHE n 3 214 LYS n 3 215 PRO n 3 216 ASN n 3 217 GLN n 3 218 GLN n 3 219 THR n 3 220 VAL n 3 221 LEU n 3 222 LEU n 3 223 PRO n 3 224 GLU n 3 225 SER n 3 226 CYS n 3 227 GLN n 3 228 HIS n 3 229 LEU n 3 230 ILE n 3 231 HIS n 3 232 SER n 3 233 LEU n 3 234 ASN n 3 235 HIS n 3 236 ILE n 3 237 LYS n 3 238 GLU n 3 239 ILE n 3 240 PRO n 3 241 GLY n 3 242 ILE n 3 243 GLY n 3 244 TYR n 3 245 LYS n 3 246 THR n 3 247 ALA n 3 248 LYS n 3 249 CYS n 3 250 LEU n 3 251 GLU n 3 252 ALA n 3 253 LEU n 3 254 GLY n 3 255 ILE n 3 256 ASN n 3 257 SER n 3 258 VAL n 3 259 ARG n 3 260 ASP n 3 261 LEU n 3 262 GLN n 3 263 THR n 3 264 PHE n 3 265 SER n 3 266 PRO n 3 267 LYS n 3 268 ILE n 3 269 LEU n 3 270 GLU n 3 271 LYS n 3 272 GLU n 3 273 LEU n 3 274 GLY n 3 275 ILE n 3 276 SER n 3 277 VAL n 3 278 ALA n 3 279 GLN n 3 280 ARG n 3 281 ILE n 3 282 GLN n 3 283 LYS n 3 284 LEU n 3 285 SER n 3 286 PHE n 3 287 GLY n 3 288 GLU n 3 289 ASP n 3 290 ASN n 3 291 SER n 3 292 PRO n 3 293 VAL n 3 294 ILE n 3 295 LEU n 3 296 SER n 3 297 GLY n 3 298 PRO n 3 299 PRO n 3 300 GLN n 3 301 SER n 3 302 PHE n 3 303 SER n 3 304 GLU n 3 305 GLU n 3 306 ASP n 3 307 SER n 3 308 PHE n 3 309 LYS n 3 310 LYS n 3 311 CYS n 3 312 SER n 3 313 SER n 3 314 GLU n 3 315 VAL n 3 316 GLU n 3 317 ALA n 3 318 LYS n 3 319 ASN n 3 320 LYS n 3 321 ILE n 3 322 GLU n 3 323 GLU n 3 324 LEU n 3 325 LEU n 3 326 ALA n 3 327 SER n 3 328 LEU n 3 329 LEU n 3 330 ASN n 3 331 ARG n 3 332 VAL n 3 333 CYS n 3 334 GLN n 3 335 ASP n 3 336 GLY n 3 337 ARG n 3 338 LYS n 3 339 PRO n 3 340 HIS n 3 341 THR n 3 342 VAL n 3 343 ARG n 3 344 LEU n 3 345 ILE n 3 346 ILE n 3 347 ARG n 3 348 ARG n 3 349 TYR n 3 350 SER n 3 351 SER n 3 352 GLU n 3 353 LYS n 3 354 HIS n 3 355 TYR n 3 356 GLY n 3 357 ARG n 3 358 GLU n 3 359 SER n 3 360 ARG n 3 361 GLN n 3 362 CYS n 3 363 PRO n 3 364 ILE n 3 365 PRO n 3 366 SER n 3 367 HIS n 3 368 VAL n 3 369 ILE n 3 370 GLN n 3 371 LYS n 3 372 LEU n 3 373 GLY n 3 374 THR n 3 375 GLY n 3 376 ASN n 3 377 TYR n 3 378 ASP n 3 379 VAL n 3 380 MET n 3 381 THR n 3 382 PRO n 3 383 MET n 3 384 VAL n 3 385 ASP n 3 386 ILE n 3 387 LEU n 3 388 MET n 3 389 LYS n 3 390 LEU n 3 391 PHE n 3 392 ARG n 3 393 ASN n 3 394 MET n 3 395 VAL n 3 396 ASN n 3 397 VAL n 3 398 LYS n 3 399 MET n 3 400 PRO n 3 401 PHE n 3 402 HIS n 3 403 LEU n 3 404 THR n 3 405 LEU n 3 406 LEU n 3 407 SER n 3 408 VAL n 3 409 CYS n 3 410 PHE n 3 411 CYS n 3 412 ASN n 3 413 LEU n 3 414 LYS n 3 415 ALA n 3 416 LEU n 3 417 ASN n 3 418 THR n 3 419 ALA n 3 420 LYS n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'POLI, RAD30B' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ;baker's yeast ; _entity_src_gen.pdbx_host_org_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4932 _entity_src_gen.host_org_genus Saccharomyces _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BJ5464 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pBJ941 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP POLI_HUMAN Q9UNA4 3 1 ? ? 2 PDB 2FLL 2FLL 1 ? ? ? 3 PDB 2FLL 2FLL 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2FLL A 1 ? 420 ? Q9UNA4 1 ? 420 ? 1 420 2 2 2FLL P 1 ? 7 ? 2FLL 867 ? 873 ? 867 873 3 3 2FLL T 1 ? 11 ? 2FLL 837 ? 847 ? 837 847 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DOC 'DNA linking' n "2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O6 P' 291.198 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TTP non-polymer . "THYMIDINE-5'-TRIPHOSPHATE" ? 'C10 H17 N2 O14 P3' 482.168 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2FLL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.68 _exptl_crystal.density_percent_sol 54.07 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'pH 6.5, VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2FLL _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.6 _reflns.number_obs 18496 _reflns.number_all 18517 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.059 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 34.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 2FLL _refine.ls_number_reflns_obs 16057 _refine.ls_number_reflns_all 18517 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs 94.19 _refine.ls_R_factor_obs 0.22765 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22329 _refine.ls_R_factor_R_free 0.27747 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.9 _refine.ls_number_reflns_R_free 1376 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.922 _refine.correlation_coeff_Fo_to_Fc_free 0.883 _refine.B_iso_mean 42.281 _refine.aniso_B[1][1] 0.63 _refine.aniso_B[2][2] 0.63 _refine.aniso_B[3][3] -0.94 _refine.aniso_B[1][2] 0.31 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB code 2AZL' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.661 _refine.pdbx_overall_ESU_R_Free 0.344 _refine.overall_SU_ML 0.232 _refine.overall_SU_B 10.680 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2866 _refine_hist.pdbx_number_atoms_nucleic_acid 321 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 91 _refine_hist.number_atoms_total 3309 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.043 0.021 ? 3295 'X-RAY DIFFRACTION' ? r_bond_other_d 0.003 0.020 ? 2889 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.929 2.112 ? 4522 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.522 3.000 ? 6769 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.705 5.000 ? 370 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.177 0.200 ? 517 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.016 0.020 ? 3369 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.014 0.020 ? 529 'X-RAY DIFFRACTION' ? r_nbd_refined 0.264 0.200 ? 719 'X-RAY DIFFRACTION' ? r_nbd_other 0.277 0.200 ? 3440 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other 0.105 0.200 ? 1938 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.196 0.200 ? 103 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.616 0.200 ? 4 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.440 0.200 ? 23 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.436 0.200 ? 7 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.951 1.500 ? 1860 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3.288 2.000 ? 2998 'X-RAY DIFFRACTION' ? r_scbond_it 3.822 3.000 ? 1435 'X-RAY DIFFRACTION' ? r_scangle_it 5.620 4.500 ? 1524 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.601 _refine_ls_shell.d_res_low 2.668 _refine_ls_shell.number_reflns_R_work 1073 _refine_ls_shell.R_factor_R_work 0.25 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.335 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 75 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2FLL _struct.title 'Ternary complex of human DNA polymerase iota with DNA and dTTP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2FLL _struct_keywords.pdbx_keywords REPLICATION/DNA _struct_keywords.text 'DNA polymerase, lesion bypass, Y-family, ternary complex, p6522, REPLICATION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS C 37 ? ASN C 47 ? CYS A 37 ASN A 47 1 ? 11 HELX_P HELX_P2 2 PRO C 48 ? LYS C 51 ? PRO A 48 LYS A 51 5 ? 4 HELX_P HELX_P3 3 ASN C 67 ? LEU C 73 ? ASN A 67 LEU A 73 1 ? 7 HELX_P HELX_P4 4 VAL C 81 ? GLU C 86 ? VAL A 81 GLU A 86 1 ? 6 HELX_P HELX_P5 5 LEU C 99 ? SER C 117 ? LEU A 99 SER A 117 1 ? 19 HELX_P HELX_P6 6 LEU C 132 ? LEU C 143 ? LEU A 132 LEU A 143 1 ? 12 HELX_P HELX_P7 7 ASP C 146 ? VAL C 151 ? ASP A 146 VAL A 151 5 ? 6 HELX_P HELX_P8 8 ASN C 159 ? GLN C 161 ? ASN A 159 GLN A 161 5 ? 3 HELX_P HELX_P9 9 ASP C 167 ? GLY C 192 ? ASP A 167 GLY A 192 1 ? 26 HELX_P HELX_P10 10 ASN C 202 ? GLY C 211 ? ASN A 202 GLY A 211 1 ? 10 HELX_P HELX_P11 11 LEU C 222 ? GLU C 224 ? LEU A 222 GLU A 224 5 ? 3 HELX_P HELX_P12 12 SER C 225 ? LEU C 233 ? SER A 225 LEU A 233 1 ? 9 HELX_P HELX_P13 13 HIS C 235 ? ILE C 239 ? HIS A 235 ILE A 239 5 ? 5 HELX_P HELX_P14 14 GLY C 243 ? LEU C 253 ? GLY A 243 LEU A 253 1 ? 11 HELX_P HELX_P15 15 SER C 257 ? PHE C 264 ? SER A 257 PHE A 264 1 ? 8 HELX_P HELX_P16 16 SER C 265 ? GLY C 274 ? SER A 265 GLY A 274 1 ? 10 HELX_P HELX_P17 17 GLY C 274 ? PHE C 286 ? GLY A 274 PHE A 286 1 ? 13 HELX_P HELX_P18 18 LYS C 318 ? GLY C 336 ? LYS A 318 GLY A 336 1 ? 19 HELX_P HELX_P19 19 VAL C 379 ? ASN C 393 ? VAL A 379 ASN A 393 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DC 6 "O3'" ? ? ? 1_555 A DOC 7 P ? ? P DC 872 P DOC 873 1_555 ? ? ? ? ? ? ? 1.603 ? ? metalc1 metalc ? ? C ASP 34 OD2 ? ? ? 1_555 D MG . MG ? ? A ASP 34 A MG 871 1_555 ? ? ? ? ? ? ? 2.009 ? ? metalc2 metalc ? ? C ASP 34 OD1 ? ? ? 1_555 E MG . MG ? ? A ASP 34 A MG 872 1_555 ? ? ? ? ? ? ? 2.700 ? ? metalc3 metalc ? ? C LEU 35 O ? ? ? 1_555 D MG . MG ? ? A LEU 35 A MG 871 1_555 ? ? ? ? ? ? ? 2.204 ? ? metalc4 metalc ? ? C ASP 126 OD1 ? ? ? 1_555 D MG . MG ? ? A ASP 126 A MG 871 1_555 ? ? ? ? ? ? ? 1.981 ? ? metalc5 metalc ? ? C GLU 127 OE2 ? ? ? 1_555 E MG . MG ? ? A GLU 127 A MG 872 1_555 ? ? ? ? ? ? ? 2.388 ? ? metalc6 metalc ? ? D MG . MG ? ? ? 1_555 F TTP . O1G ? ? A MG 871 A TTP 875 1_555 ? ? ? ? ? ? ? 2.390 ? ? metalc7 metalc ? ? D MG . MG ? ? ? 1_555 F TTP . O2B ? ? A MG 871 A TTP 875 1_555 ? ? ? ? ? ? ? 2.276 ? ? metalc8 metalc ? ? D MG . MG ? ? ? 1_555 F TTP . O1A ? ? A MG 871 A TTP 875 1_555 ? ? ? ? ? ? ? 2.332 ? ? metalc9 metalc ? ? E MG . MG ? ? ? 1_555 F TTP . O1A ? ? A MG 872 A TTP 875 1_555 ? ? ? ? ? ? ? 2.422 ? ? hydrog1 hydrog ? ? A DA 1 N1 ? ? ? 1_555 B DT 11 N3 ? ? P DA 867 T DT 847 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 1 N6 ? ? ? 1_555 B DT 11 O4 ? ? P DA 867 T DT 847 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 10 N3 ? ? P DG 868 T DC 846 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 10 O2 ? ? P DG 868 T DC 846 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 10 N4 ? ? P DG 868 T DC 846 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 9 N3 ? ? P DG 869 T DC 845 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 9 O2 ? ? P DG 869 T DC 845 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 9 N4 ? ? P DG 869 T DC 845 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 8 N3 ? ? P DA 870 T DT 844 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 8 O4 ? ? P DA 870 T DT 844 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 7 N1 ? ? P DC 871 T DG 843 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 7 O6 ? ? P DC 871 T DG 843 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 7 N2 ? ? P DC 871 T DG 843 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 6 N1 ? ? P DC 872 T DG 842 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 6 O6 ? ? P DC 872 T DG 842 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 6 N2 ? ? P DC 872 T DG 842 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DOC 7 N3 ? ? ? 1_555 B DG 5 N1 ? ? P DOC 873 T DG 841 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DOC 7 N4 ? ? ? 1_555 B DG 5 O6 ? ? P DOC 873 T DG 841 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DOC 7 O2 ? ? ? 1_555 B DG 5 N2 ? ? P DOC 873 T DG 841 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 4 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL C 120 ? LEU C 123 ? VAL A 120 LEU A 123 A 2 GLU C 127 ? ASP C 131 ? GLU A 127 ASP A 131 A 3 ILE C 30 ? LEU C 35 ? ILE A 30 LEU A 35 A 4 GLY C 195 ? ALA C 200 ? GLY A 195 ALA A 200 A 5 GLN C 218 ? VAL C 220 ? GLN A 218 VAL A 220 A 6 HIS C 156 ? VAL C 157 ? HIS A 156 VAL A 157 B 1 MET C 79 ? ASN C 80 ? MET A 79 ASN A 80 B 2 LEU C 62 ? CYS C 66 ? LEU A 62 CYS A 66 B 3 LEU C 55 ? GLN C 59 ? LEU A 55 GLN A 59 B 4 VAL C 92 ? ASN C 95 ? VAL A 92 ASN A 95 C 1 SER C 301 ? SER C 307 ? SER A 301 SER A 307 C 2 LEU C 405 ? LYS C 414 ? LEU A 405 LYS A 414 C 3 LYS C 338 ? ILE C 346 ? LYS A 338 ILE A 346 C 4 GLU C 358 ? PRO C 363 ? GLU A 358 PRO A 363 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU C 121 ? N GLU A 121 O PHE C 129 ? O PHE A 129 A 2 3 O ASN C 128 ? O ASN A 128 N VAL C 33 ? N VAL A 33 A 3 4 N ASP C 34 ? N ASP A 34 O CYS C 196 ? O CYS A 196 A 4 5 N VAL C 199 ? N VAL A 199 O THR C 219 ? O THR A 219 A 5 6 O GLN C 218 ? O GLN A 218 N HIS C 156 ? N HIS A 156 B 1 2 O MET C 79 ? O MET A 79 N VAL C 63 ? N VAL A 63 B 2 3 O THR C 65 ? O THR A 65 N VAL C 57 ? N VAL A 57 B 3 4 N GLY C 56 ? N GLY A 56 O VAL C 92 ? O VAL A 92 C 1 2 N GLU C 304 ? N GLU A 304 O VAL C 408 ? O VAL A 408 C 2 3 O SER C 407 ? O SER A 407 N ILE C 345 ? N ILE A 345 C 3 4 N VAL C 342 ? N VAL A 342 O CYS C 362 ? O CYS A 362 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 871 ? 5 'BINDING SITE FOR RESIDUE MG A 871' AC2 Software A MG 872 ? 5 'BINDING SITE FOR RESIDUE MG A 872' AC3 Software A TTP 875 ? 21 'BINDING SITE FOR RESIDUE TTP A 875' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP C 34 ? ASP A 34 . ? 1_555 ? 2 AC1 5 LEU C 35 ? LEU A 35 . ? 1_555 ? 3 AC1 5 ASP C 126 ? ASP A 126 . ? 1_555 ? 4 AC1 5 MG E . ? MG A 872 . ? 1_555 ? 5 AC1 5 TTP F . ? TTP A 875 . ? 1_555 ? 6 AC2 5 ASP C 34 ? ASP A 34 . ? 1_555 ? 7 AC2 5 GLU C 127 ? GLU A 127 . ? 1_555 ? 8 AC2 5 MG D . ? MG A 871 . ? 1_555 ? 9 AC2 5 TTP F . ? TTP A 875 . ? 1_555 ? 10 AC2 5 DOC A 7 ? DOC P 873 . ? 1_555 ? 11 AC3 21 ASP C 34 ? ASP A 34 . ? 1_555 ? 12 AC3 21 LEU C 35 ? LEU A 35 . ? 1_555 ? 13 AC3 21 ASP C 36 ? ASP A 36 . ? 1_555 ? 14 AC3 21 CYS C 37 ? CYS A 37 . ? 1_555 ? 15 AC3 21 PHE C 38 ? PHE A 38 . ? 1_555 ? 16 AC3 21 TYR C 39 ? TYR A 39 . ? 1_555 ? 17 AC3 21 VAL C 64 ? VAL A 64 . ? 1_555 ? 18 AC3 21 THR C 65 ? THR A 65 . ? 1_555 ? 19 AC3 21 TYR C 68 ? TYR A 68 . ? 1_555 ? 20 AC3 21 ARG C 71 ? ARG A 71 . ? 1_555 ? 21 AC3 21 LYS C 77 ? LYS A 77 . ? 1_555 ? 22 AC3 21 ASP C 126 ? ASP A 126 . ? 1_555 ? 23 AC3 21 LYS C 214 ? LYS A 214 . ? 1_555 ? 24 AC3 21 MG D . ? MG A 871 . ? 1_555 ? 25 AC3 21 MG E . ? MG A 872 . ? 1_555 ? 26 AC3 21 HOH H . ? HOH A 903 . ? 1_555 ? 27 AC3 21 HOH H . ? HOH A 908 . ? 1_555 ? 28 AC3 21 HOH H . ? HOH A 923 . ? 1_555 ? 29 AC3 21 DOC A 7 ? DOC P 873 . ? 1_555 ? 30 AC3 21 DA B 4 ? DA T 840 . ? 1_555 ? 31 AC3 21 DG B 5 ? DG T 841 . ? 1_555 ? # _database_PDB_matrix.entry_id 2FLL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2FLL _atom_sites.fract_transf_matrix[1][1] 0.010170 _atom_sites.fract_transf_matrix[1][2] 0.005872 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011743 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004946 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 867 867 DA A P . n A 1 2 DG 2 868 868 DG G P . n A 1 3 DG 3 869 869 DG G P . n A 1 4 DA 4 870 870 DA A P . n A 1 5 DC 5 871 871 DC C P . n A 1 6 DC 6 872 872 DC C P . n A 1 7 DOC 7 873 873 DOC DOC P . n B 2 1 DT 1 837 ? ? ? T . n B 2 2 DC 2 838 ? ? ? T . n B 2 3 DT 3 839 839 DT T T . n B 2 4 DA 4 840 840 DA A T . n B 2 5 DG 5 841 841 DG G T . n B 2 6 DG 6 842 842 DG G T . n B 2 7 DG 7 843 843 DG G T . n B 2 8 DT 8 844 844 DT T T . n B 2 9 DC 9 845 845 DC C T . n B 2 10 DC 10 846 846 DC C T . n B 2 11 DT 11 847 847 DT T T . n C 3 1 MET 1 1 ? ? ? A . n C 3 2 GLU 2 2 ? ? ? A . n C 3 3 LEU 3 3 ? ? ? A . n C 3 4 ALA 4 4 ? ? ? A . n C 3 5 ASP 5 5 ? ? ? A . n C 3 6 VAL 6 6 ? ? ? A . n C 3 7 GLY 7 7 ? ? ? A . n C 3 8 ALA 8 8 ? ? ? A . n C 3 9 ALA 9 9 ? ? ? A . n C 3 10 ALA 10 10 ? ? ? A . n C 3 11 SER 11 11 ? ? ? A . n C 3 12 SER 12 12 ? ? ? A . n C 3 13 GLN 13 13 ? ? ? A . n C 3 14 GLY 14 14 ? ? ? A . n C 3 15 VAL 15 15 ? ? ? A . n C 3 16 HIS 16 16 ? ? ? A . n C 3 17 ASP 17 17 ? ? ? A . n C 3 18 GLN 18 18 ? ? ? A . n C 3 19 VAL 19 19 ? ? ? A . n C 3 20 LEU 20 20 ? ? ? A . n C 3 21 PRO 21 21 ? ? ? A . n C 3 22 THR 22 22 ? ? ? A . n C 3 23 PRO 23 23 ? ? ? A . n C 3 24 ASN 24 24 ? ? ? A . n C 3 25 ALA 25 25 25 ALA ALA A . n C 3 26 SER 26 26 26 SER SER A . n C 3 27 SER 27 27 27 SER SER A . n C 3 28 ARG 28 28 28 ARG ARG A . n C 3 29 VAL 29 29 29 VAL VAL A . n C 3 30 ILE 30 30 30 ILE ILE A . n C 3 31 VAL 31 31 31 VAL VAL A . n C 3 32 HIS 32 32 32 HIS HIS A . n C 3 33 VAL 33 33 33 VAL VAL A . n C 3 34 ASP 34 34 34 ASP ASP A . n C 3 35 LEU 35 35 35 LEU LEU A . n C 3 36 ASP 36 36 36 ASP ASP A . n C 3 37 CYS 37 37 37 CYS CYS A . n C 3 38 PHE 38 38 38 PHE PHE A . n C 3 39 TYR 39 39 39 TYR TYR A . n C 3 40 ALA 40 40 40 ALA ALA A . n C 3 41 GLN 41 41 41 GLN GLN A . n C 3 42 VAL 42 42 42 VAL VAL A . n C 3 43 GLU 43 43 43 GLU GLU A . n C 3 44 MET 44 44 44 MET MET A . n C 3 45 ILE 45 45 45 ILE ILE A . n C 3 46 SER 46 46 46 SER SER A . n C 3 47 ASN 47 47 47 ASN ASN A . n C 3 48 PRO 48 48 48 PRO PRO A . n C 3 49 GLU 49 49 49 GLU GLU A . n C 3 50 LEU 50 50 50 LEU LEU A . n C 3 51 LYS 51 51 51 LYS LYS A . n C 3 52 ASP 52 52 52 ASP ASP A . n C 3 53 LYS 53 53 53 LYS LYS A . n C 3 54 PRO 54 54 54 PRO PRO A . n C 3 55 LEU 55 55 55 LEU LEU A . n C 3 56 GLY 56 56 56 GLY GLY A . n C 3 57 VAL 57 57 57 VAL VAL A . n C 3 58 GLN 58 58 58 GLN GLN A . n C 3 59 GLN 59 59 59 GLN GLN A . n C 3 60 LYS 60 60 60 LYS LYS A . n C 3 61 TYR 61 61 61 TYR TYR A . n C 3 62 LEU 62 62 62 LEU LEU A . n C 3 63 VAL 63 63 63 VAL VAL A . n C 3 64 VAL 64 64 64 VAL VAL A . n C 3 65 THR 65 65 65 THR THR A . n C 3 66 CYS 66 66 66 CYS CYS A . n C 3 67 ASN 67 67 67 ASN ASN A . n C 3 68 TYR 68 68 68 TYR TYR A . n C 3 69 GLU 69 69 69 GLU GLU A . n C 3 70 ALA 70 70 70 ALA ALA A . n C 3 71 ARG 71 71 71 ARG ARG A . n C 3 72 LYS 72 72 72 LYS LYS A . n C 3 73 LEU 73 73 73 LEU LEU A . n C 3 74 GLY 74 74 74 GLY GLY A . n C 3 75 VAL 75 75 75 VAL VAL A . n C 3 76 LYS 76 76 76 LYS LYS A . n C 3 77 LYS 77 77 77 LYS LYS A . n C 3 78 LEU 78 78 78 LEU LEU A . n C 3 79 MET 79 79 79 MET MET A . n C 3 80 ASN 80 80 80 ASN ASN A . n C 3 81 VAL 81 81 81 VAL VAL A . n C 3 82 ARG 82 82 82 ARG ARG A . n C 3 83 ASP 83 83 83 ASP ASP A . n C 3 84 ALA 84 84 84 ALA ALA A . n C 3 85 LYS 85 85 85 LYS LYS A . n C 3 86 GLU 86 86 86 GLU GLU A . n C 3 87 LYS 87 87 87 LYS LYS A . n C 3 88 CYS 88 88 88 CYS CYS A . n C 3 89 PRO 89 89 89 PRO PRO A . n C 3 90 GLN 90 90 90 GLN GLN A . n C 3 91 LEU 91 91 91 LEU LEU A . n C 3 92 VAL 92 92 92 VAL VAL A . n C 3 93 LEU 93 93 93 LEU LEU A . n C 3 94 VAL 94 94 94 VAL VAL A . n C 3 95 ASN 95 95 95 ASN ASN A . n C 3 96 GLY 96 96 96 GLY GLY A . n C 3 97 GLU 97 97 97 GLU GLU A . n C 3 98 ASP 98 98 98 ASP ASP A . n C 3 99 LEU 99 99 99 LEU LEU A . n C 3 100 THR 100 100 100 THR THR A . n C 3 101 ARG 101 101 101 ARG ARG A . n C 3 102 TYR 102 102 102 TYR TYR A . n C 3 103 ARG 103 103 103 ARG ARG A . n C 3 104 GLU 104 104 104 GLU GLU A . n C 3 105 MET 105 105 105 MET MET A . n C 3 106 SER 106 106 106 SER SER A . n C 3 107 TYR 107 107 107 TYR TYR A . n C 3 108 LYS 108 108 108 LYS LYS A . n C 3 109 VAL 109 109 109 VAL VAL A . n C 3 110 THR 110 110 110 THR THR A . n C 3 111 GLU 111 111 111 GLU GLU A . n C 3 112 LEU 112 112 112 LEU LEU A . n C 3 113 LEU 113 113 113 LEU LEU A . n C 3 114 GLU 114 114 114 GLU GLU A . n C 3 115 GLU 115 115 115 GLU GLU A . n C 3 116 PHE 116 116 116 PHE PHE A . n C 3 117 SER 117 117 117 SER SER A . n C 3 118 PRO 118 118 118 PRO PRO A . n C 3 119 VAL 119 119 119 VAL VAL A . n C 3 120 VAL 120 120 120 VAL VAL A . n C 3 121 GLU 121 121 121 GLU GLU A . n C 3 122 ARG 122 122 122 ARG ARG A . n C 3 123 LEU 123 123 123 LEU LEU A . n C 3 124 GLY 124 124 124 GLY GLY A . n C 3 125 PHE 125 125 125 PHE PHE A . n C 3 126 ASP 126 126 126 ASP ASP A . n C 3 127 GLU 127 127 127 GLU GLU A . n C 3 128 ASN 128 128 128 ASN ASN A . n C 3 129 PHE 129 129 129 PHE PHE A . n C 3 130 VAL 130 130 130 VAL VAL A . n C 3 131 ASP 131 131 131 ASP ASP A . n C 3 132 LEU 132 132 132 LEU LEU A . n C 3 133 THR 133 133 133 THR THR A . n C 3 134 GLU 134 134 134 GLU GLU A . n C 3 135 MET 135 135 135 MET MET A . n C 3 136 VAL 136 136 136 VAL VAL A . n C 3 137 GLU 137 137 137 GLU GLU A . n C 3 138 LYS 138 138 138 LYS LYS A . n C 3 139 ARG 139 139 139 ARG ARG A . n C 3 140 LEU 140 140 140 LEU LEU A . n C 3 141 GLN 141 141 141 GLN GLN A . n C 3 142 GLN 142 142 142 GLN GLN A . n C 3 143 LEU 143 143 143 LEU LEU A . n C 3 144 GLN 144 144 144 GLN GLN A . n C 3 145 SER 145 145 145 SER SER A . n C 3 146 ASP 146 146 146 ASP ASP A . n C 3 147 GLU 147 147 147 GLU GLU A . n C 3 148 LEU 148 148 148 LEU LEU A . n C 3 149 SER 149 149 149 SER SER A . n C 3 150 ALA 150 150 150 ALA ALA A . n C 3 151 VAL 151 151 151 VAL VAL A . n C 3 152 THR 152 152 152 THR THR A . n C 3 153 VAL 153 153 153 VAL VAL A . n C 3 154 SER 154 154 154 SER SER A . n C 3 155 GLY 155 155 155 GLY GLY A . n C 3 156 HIS 156 156 156 HIS HIS A . n C 3 157 VAL 157 157 157 VAL VAL A . n C 3 158 TYR 158 158 158 TYR TYR A . n C 3 159 ASN 159 159 159 ASN ASN A . n C 3 160 ASN 160 160 160 ASN ASN A . n C 3 161 GLN 161 161 161 GLN GLN A . n C 3 162 SER 162 162 162 SER SER A . n C 3 163 ILE 163 163 163 ILE ILE A . n C 3 164 ASN 164 164 164 ASN ASN A . n C 3 165 LEU 165 165 165 LEU LEU A . n C 3 166 LEU 166 166 166 LEU LEU A . n C 3 167 ASP 167 167 167 ASP ASP A . n C 3 168 VAL 168 168 168 VAL VAL A . n C 3 169 LEU 169 169 169 LEU LEU A . n C 3 170 HIS 170 170 170 HIS HIS A . n C 3 171 ILE 171 171 171 ILE ILE A . n C 3 172 ARG 172 172 172 ARG ARG A . n C 3 173 LEU 173 173 173 LEU LEU A . n C 3 174 LEU 174 174 174 LEU LEU A . n C 3 175 VAL 175 175 175 VAL VAL A . n C 3 176 GLY 176 176 176 GLY GLY A . n C 3 177 SER 177 177 177 SER SER A . n C 3 178 GLN 178 178 178 GLN GLN A . n C 3 179 ILE 179 179 179 ILE ILE A . n C 3 180 ALA 180 180 180 ALA ALA A . n C 3 181 ALA 181 181 181 ALA ALA A . n C 3 182 GLU 182 182 182 GLU GLU A . n C 3 183 MET 183 183 183 MET MET A . n C 3 184 ARG 184 184 184 ARG ARG A . n C 3 185 GLU 185 185 185 GLU GLU A . n C 3 186 ALA 186 186 186 ALA ALA A . n C 3 187 MET 187 187 187 MET MET A . n C 3 188 TYR 188 188 188 TYR TYR A . n C 3 189 ASN 189 189 189 ASN ASN A . n C 3 190 GLN 190 190 190 GLN GLN A . n C 3 191 LEU 191 191 191 LEU LEU A . n C 3 192 GLY 192 192 192 GLY GLY A . n C 3 193 LEU 193 193 193 LEU LEU A . n C 3 194 THR 194 194 194 THR THR A . n C 3 195 GLY 195 195 195 GLY GLY A . n C 3 196 CYS 196 196 196 CYS CYS A . n C 3 197 ALA 197 197 197 ALA ALA A . n C 3 198 GLY 198 198 198 GLY GLY A . n C 3 199 VAL 199 199 199 VAL VAL A . n C 3 200 ALA 200 200 200 ALA ALA A . n C 3 201 SER 201 201 201 SER SER A . n C 3 202 ASN 202 202 202 ASN ASN A . n C 3 203 LYS 203 203 203 LYS LYS A . n C 3 204 LEU 204 204 204 LEU LEU A . n C 3 205 LEU 205 205 205 LEU LEU A . n C 3 206 ALA 206 206 206 ALA ALA A . n C 3 207 LYS 207 207 207 LYS LYS A . n C 3 208 LEU 208 208 208 LEU LEU A . n C 3 209 VAL 209 209 209 VAL VAL A . n C 3 210 SER 210 210 210 SER SER A . n C 3 211 GLY 211 211 211 GLY GLY A . n C 3 212 VAL 212 212 212 VAL VAL A . n C 3 213 PHE 213 213 213 PHE PHE A . n C 3 214 LYS 214 214 214 LYS LYS A . n C 3 215 PRO 215 215 215 PRO PRO A . n C 3 216 ASN 216 216 216 ASN ASN A . n C 3 217 GLN 217 217 217 GLN GLN A . n C 3 218 GLN 218 218 218 GLN GLN A . n C 3 219 THR 219 219 219 THR THR A . n C 3 220 VAL 220 220 220 VAL VAL A . n C 3 221 LEU 221 221 221 LEU LEU A . n C 3 222 LEU 222 222 222 LEU LEU A . n C 3 223 PRO 223 223 223 PRO PRO A . n C 3 224 GLU 224 224 224 GLU GLU A . n C 3 225 SER 225 225 225 SER SER A . n C 3 226 CYS 226 226 226 CYS CYS A . n C 3 227 GLN 227 227 227 GLN GLN A . n C 3 228 HIS 228 228 228 HIS HIS A . n C 3 229 LEU 229 229 229 LEU LEU A . n C 3 230 ILE 230 230 230 ILE ILE A . n C 3 231 HIS 231 231 231 HIS HIS A . n C 3 232 SER 232 232 232 SER SER A . n C 3 233 LEU 233 233 233 LEU LEU A . n C 3 234 ASN 234 234 234 ASN ASN A . n C 3 235 HIS 235 235 235 HIS HIS A . n C 3 236 ILE 236 236 236 ILE ILE A . n C 3 237 LYS 237 237 237 LYS LYS A . n C 3 238 GLU 238 238 238 GLU GLU A . n C 3 239 ILE 239 239 239 ILE ILE A . n C 3 240 PRO 240 240 240 PRO PRO A . n C 3 241 GLY 241 241 241 GLY GLY A . n C 3 242 ILE 242 242 242 ILE ILE A . n C 3 243 GLY 243 243 243 GLY GLY A . n C 3 244 TYR 244 244 244 TYR TYR A . n C 3 245 LYS 245 245 245 LYS LYS A . n C 3 246 THR 246 246 246 THR THR A . n C 3 247 ALA 247 247 247 ALA ALA A . n C 3 248 LYS 248 248 248 LYS LYS A . n C 3 249 CYS 249 249 249 CYS CYS A . n C 3 250 LEU 250 250 250 LEU LEU A . n C 3 251 GLU 251 251 251 GLU GLU A . n C 3 252 ALA 252 252 252 ALA ALA A . n C 3 253 LEU 253 253 253 LEU LEU A . n C 3 254 GLY 254 254 254 GLY GLY A . n C 3 255 ILE 255 255 255 ILE ILE A . n C 3 256 ASN 256 256 256 ASN ASN A . n C 3 257 SER 257 257 257 SER SER A . n C 3 258 VAL 258 258 258 VAL VAL A . n C 3 259 ARG 259 259 259 ARG ARG A . n C 3 260 ASP 260 260 260 ASP ASP A . n C 3 261 LEU 261 261 261 LEU LEU A . n C 3 262 GLN 262 262 262 GLN GLN A . n C 3 263 THR 263 263 263 THR THR A . n C 3 264 PHE 264 264 264 PHE PHE A . n C 3 265 SER 265 265 265 SER SER A . n C 3 266 PRO 266 266 266 PRO PRO A . n C 3 267 LYS 267 267 267 LYS LYS A . n C 3 268 ILE 268 268 268 ILE ILE A . n C 3 269 LEU 269 269 269 LEU LEU A . n C 3 270 GLU 270 270 270 GLU GLU A . n C 3 271 LYS 271 271 271 LYS LYS A . n C 3 272 GLU 272 272 272 GLU GLU A . n C 3 273 LEU 273 273 273 LEU LEU A . n C 3 274 GLY 274 274 274 GLY GLY A . n C 3 275 ILE 275 275 275 ILE ILE A . n C 3 276 SER 276 276 276 SER SER A . n C 3 277 VAL 277 277 277 VAL VAL A . n C 3 278 ALA 278 278 278 ALA ALA A . n C 3 279 GLN 279 279 279 GLN GLN A . n C 3 280 ARG 280 280 280 ARG ARG A . n C 3 281 ILE 281 281 281 ILE ILE A . n C 3 282 GLN 282 282 282 GLN GLN A . n C 3 283 LYS 283 283 283 LYS LYS A . n C 3 284 LEU 284 284 284 LEU LEU A . n C 3 285 SER 285 285 285 SER SER A . n C 3 286 PHE 286 286 286 PHE PHE A . n C 3 287 GLY 287 287 287 GLY GLY A . n C 3 288 GLU 288 288 288 GLU GLU A . n C 3 289 ASP 289 289 289 ASP ASP A . n C 3 290 ASN 290 290 290 ASN ASN A . n C 3 291 SER 291 291 291 SER SER A . n C 3 292 PRO 292 292 292 PRO PRO A . n C 3 293 VAL 293 293 293 VAL VAL A . n C 3 294 ILE 294 294 294 ILE ILE A . n C 3 295 LEU 295 295 295 LEU LEU A . n C 3 296 SER 296 296 296 SER SER A . n C 3 297 GLY 297 297 297 GLY GLY A . n C 3 298 PRO 298 298 298 PRO PRO A . n C 3 299 PRO 299 299 299 PRO PRO A . n C 3 300 GLN 300 300 300 GLN GLN A . n C 3 301 SER 301 301 301 SER SER A . n C 3 302 PHE 302 302 302 PHE PHE A . n C 3 303 SER 303 303 303 SER SER A . n C 3 304 GLU 304 304 304 GLU GLU A . n C 3 305 GLU 305 305 305 GLU GLU A . n C 3 306 ASP 306 306 306 ASP ASP A . n C 3 307 SER 307 307 307 SER SER A . n C 3 308 PHE 308 308 308 PHE PHE A . n C 3 309 LYS 309 309 309 LYS LYS A . n C 3 310 LYS 310 310 310 LYS LYS A . n C 3 311 CYS 311 311 311 CYS CYS A . n C 3 312 SER 312 312 312 SER SER A . n C 3 313 SER 313 313 313 SER SER A . n C 3 314 GLU 314 314 314 GLU GLU A . n C 3 315 VAL 315 315 315 VAL VAL A . n C 3 316 GLU 316 316 316 GLU GLU A . n C 3 317 ALA 317 317 317 ALA ALA A . n C 3 318 LYS 318 318 318 LYS LYS A . n C 3 319 ASN 319 319 319 ASN ASN A . n C 3 320 LYS 320 320 320 LYS LYS A . n C 3 321 ILE 321 321 321 ILE ILE A . n C 3 322 GLU 322 322 322 GLU GLU A . n C 3 323 GLU 323 323 323 GLU GLU A . n C 3 324 LEU 324 324 324 LEU LEU A . n C 3 325 LEU 325 325 325 LEU LEU A . n C 3 326 ALA 326 326 326 ALA ALA A . n C 3 327 SER 327 327 327 SER SER A . n C 3 328 LEU 328 328 328 LEU LEU A . n C 3 329 LEU 329 329 329 LEU LEU A . n C 3 330 ASN 330 330 330 ASN ASN A . n C 3 331 ARG 331 331 331 ARG ARG A . n C 3 332 VAL 332 332 332 VAL VAL A . n C 3 333 CYS 333 333 333 CYS CYS A . n C 3 334 GLN 334 334 334 GLN GLN A . n C 3 335 ASP 335 335 335 ASP ASP A . n C 3 336 GLY 336 336 336 GLY GLY A . n C 3 337 ARG 337 337 337 ARG ARG A . n C 3 338 LYS 338 338 338 LYS LYS A . n C 3 339 PRO 339 339 339 PRO PRO A . n C 3 340 HIS 340 340 340 HIS HIS A . n C 3 341 THR 341 341 341 THR THR A . n C 3 342 VAL 342 342 342 VAL VAL A . n C 3 343 ARG 343 343 343 ARG ARG A . n C 3 344 LEU 344 344 344 LEU LEU A . n C 3 345 ILE 345 345 345 ILE ILE A . n C 3 346 ILE 346 346 346 ILE ILE A . n C 3 347 ARG 347 347 347 ARG ARG A . n C 3 348 ARG 348 348 348 ARG ARG A . n C 3 349 TYR 349 349 349 TYR TYR A . n C 3 350 SER 350 350 350 SER SER A . n C 3 351 SER 351 351 351 SER SER A . n C 3 352 GLU 352 352 352 GLU GLU A . n C 3 353 LYS 353 353 353 LYS LYS A . n C 3 354 HIS 354 354 354 HIS HIS A . n C 3 355 TYR 355 355 355 TYR TYR A . n C 3 356 GLY 356 356 356 GLY GLY A . n C 3 357 ARG 357 357 357 ARG ARG A . n C 3 358 GLU 358 358 358 GLU GLU A . n C 3 359 SER 359 359 359 SER SER A . n C 3 360 ARG 360 360 360 ARG ARG A . n C 3 361 GLN 361 361 361 GLN GLN A . n C 3 362 CYS 362 362 362 CYS CYS A . n C 3 363 PRO 363 363 363 PRO PRO A . n C 3 364 ILE 364 364 364 ILE ILE A . n C 3 365 PRO 365 365 365 PRO PRO A . n C 3 366 SER 366 366 366 SER SER A . n C 3 367 HIS 367 367 367 HIS HIS A . n C 3 368 VAL 368 368 368 VAL VAL A . n C 3 369 ILE 369 369 369 ILE ILE A . n C 3 370 GLN 370 370 370 GLN GLN A . n C 3 371 LYS 371 371 ? ? ? A . n C 3 372 LEU 372 372 ? ? ? A . n C 3 373 GLY 373 373 ? ? ? A . n C 3 374 THR 374 374 ? ? ? A . n C 3 375 GLY 375 375 ? ? ? A . n C 3 376 ASN 376 376 ? ? ? A . n C 3 377 TYR 377 377 ? ? ? A . n C 3 378 ASP 378 378 ? ? ? A . n C 3 379 VAL 379 379 379 VAL VAL A . n C 3 380 MET 380 380 380 MET MET A . n C 3 381 THR 381 381 381 THR THR A . n C 3 382 PRO 382 382 382 PRO PRO A . n C 3 383 MET 383 383 383 MET MET A . n C 3 384 VAL 384 384 384 VAL VAL A . n C 3 385 ASP 385 385 385 ASP ASP A . n C 3 386 ILE 386 386 386 ILE ILE A . n C 3 387 LEU 387 387 387 LEU LEU A . n C 3 388 MET 388 388 388 MET MET A . n C 3 389 LYS 389 389 389 LYS LYS A . n C 3 390 LEU 390 390 390 LEU LEU A . n C 3 391 PHE 391 391 391 PHE PHE A . n C 3 392 ARG 392 392 392 ARG ARG A . n C 3 393 ASN 393 393 393 ASN ASN A . n C 3 394 MET 394 394 394 MET MET A . n C 3 395 VAL 395 395 ? ? ? A . n C 3 396 ASN 396 396 ? ? ? A . n C 3 397 VAL 397 397 ? ? ? A . n C 3 398 LYS 398 398 ? ? ? A . n C 3 399 MET 399 399 ? ? ? A . n C 3 400 PRO 400 400 ? ? ? A . n C 3 401 PHE 401 401 ? ? ? A . n C 3 402 HIS 402 402 ? ? ? A . n C 3 403 LEU 403 403 ? ? ? A . n C 3 404 THR 404 404 404 THR THR A . n C 3 405 LEU 405 405 405 LEU LEU A . n C 3 406 LEU 406 406 406 LEU LEU A . n C 3 407 SER 407 407 407 SER SER A . n C 3 408 VAL 408 408 408 VAL VAL A . n C 3 409 CYS 409 409 409 CYS CYS A . n C 3 410 PHE 410 410 410 PHE PHE A . n C 3 411 CYS 411 411 411 CYS CYS A . n C 3 412 ASN 412 412 412 ASN ASN A . n C 3 413 LEU 413 413 413 LEU LEU A . n C 3 414 LYS 414 414 414 LYS LYS A . n C 3 415 ALA 415 415 ? ? ? A . n C 3 416 LEU 416 416 ? ? ? A . n C 3 417 ASN 417 417 ? ? ? A . n C 3 418 THR 418 418 ? ? ? A . n C 3 419 ALA 419 419 ? ? ? A . n C 3 420 LYS 420 420 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG 1 871 871 MG MG A . E 4 MG 1 872 872 MG MG A . F 5 TTP 1 875 875 TTP TTP A . G 6 HOH 1 945 945 HOH HOH T . G 6 HOH 2 968 968 HOH HOH T . G 6 HOH 3 970 970 HOH HOH T . G 6 HOH 4 974 974 HOH HOH T . G 6 HOH 5 993 993 HOH HOH T . H 6 HOH 1 902 902 HOH HOH A . H 6 HOH 2 903 903 HOH HOH A . H 6 HOH 3 905 905 HOH HOH A . H 6 HOH 4 906 906 HOH HOH A . H 6 HOH 5 907 907 HOH HOH A . H 6 HOH 6 908 908 HOH HOH A . H 6 HOH 7 909 909 HOH HOH A . H 6 HOH 8 910 910 HOH HOH A . H 6 HOH 9 911 911 HOH HOH A . H 6 HOH 10 912 912 HOH HOH A . H 6 HOH 11 913 913 HOH HOH A . H 6 HOH 12 914 914 HOH HOH A . H 6 HOH 13 915 915 HOH HOH A . H 6 HOH 14 916 916 HOH HOH A . H 6 HOH 15 917 917 HOH HOH A . H 6 HOH 16 919 919 HOH HOH A . H 6 HOH 17 920 920 HOH HOH A . H 6 HOH 18 921 921 HOH HOH A . H 6 HOH 19 922 922 HOH HOH A . H 6 HOH 20 923 923 HOH HOH A . H 6 HOH 21 924 924 HOH HOH A . H 6 HOH 22 925 925 HOH HOH A . H 6 HOH 23 926 926 HOH HOH A . H 6 HOH 24 928 928 HOH HOH A . H 6 HOH 25 929 929 HOH HOH A . H 6 HOH 26 930 930 HOH HOH A . H 6 HOH 27 933 933 HOH HOH A . H 6 HOH 28 935 935 HOH HOH A . H 6 HOH 29 937 937 HOH HOH A . H 6 HOH 30 938 938 HOH HOH A . H 6 HOH 31 939 939 HOH HOH A . H 6 HOH 32 940 940 HOH HOH A . H 6 HOH 33 943 943 HOH HOH A . H 6 HOH 34 944 944 HOH HOH A . H 6 HOH 35 946 946 HOH HOH A . H 6 HOH 36 949 949 HOH HOH A . H 6 HOH 37 954 954 HOH HOH A . H 6 HOH 38 956 956 HOH HOH A . H 6 HOH 39 959 959 HOH HOH A . H 6 HOH 40 961 961 HOH HOH A . H 6 HOH 41 962 962 HOH HOH A . H 6 HOH 42 967 967 HOH HOH A . H 6 HOH 43 972 972 HOH HOH A . H 6 HOH 44 973 973 HOH HOH A . H 6 HOH 45 975 975 HOH HOH A . H 6 HOH 46 976 976 HOH HOH A . H 6 HOH 47 979 979 HOH HOH A . H 6 HOH 48 981 981 HOH HOH A . H 6 HOH 49 982 982 HOH HOH A . H 6 HOH 50 983 983 HOH HOH A . H 6 HOH 51 986 986 HOH HOH A . H 6 HOH 52 988 988 HOH HOH A . H 6 HOH 53 989 989 HOH HOH A . H 6 HOH 54 995 995 HOH HOH A . H 6 HOH 55 1001 1001 HOH HOH A . H 6 HOH 56 1004 1004 HOH HOH A . H 6 HOH 57 1006 1006 HOH HOH A . H 6 HOH 58 1007 1007 HOH HOH A . H 6 HOH 59 1013 1013 HOH HOH A . H 6 HOH 60 1015 1015 HOH HOH A . H 6 HOH 61 1016 1016 HOH HOH A . H 6 HOH 62 1018 1018 HOH HOH A . H 6 HOH 63 1023 1023 HOH HOH A . H 6 HOH 64 1024 1024 HOH HOH A . H 6 HOH 65 1025 1025 HOH HOH A . H 6 HOH 66 1026 1026 HOH HOH A . H 6 HOH 67 1027 1027 HOH HOH A . H 6 HOH 68 1028 1028 HOH HOH A . H 6 HOH 69 1030 1030 HOH HOH A . H 6 HOH 70 1032 1032 HOH HOH A . H 6 HOH 71 1033 1033 HOH HOH A . H 6 HOH 72 1034 1034 HOH HOH A . H 6 HOH 73 1037 1037 HOH HOH A . H 6 HOH 74 1039 1039 HOH HOH A . H 6 HOH 75 1040 1040 HOH HOH A . H 6 HOH 76 1045 1045 HOH HOH A . H 6 HOH 77 1047 1047 HOH HOH A . H 6 HOH 78 1049 1049 HOH HOH A . H 6 HOH 79 1051 1051 HOH HOH A . H 6 HOH 80 1053 1053 HOH HOH A . H 6 HOH 81 1054 1054 HOH HOH A . H 6 HOH 82 1055 1055 HOH HOH A . H 6 HOH 83 1063 1063 HOH HOH A . H 6 HOH 84 1066 1066 HOH HOH A . H 6 HOH 85 1068 1068 HOH HOH A . H 6 HOH 86 1079 1079 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id DOC _pdbx_struct_mod_residue.label_seq_id 7 _pdbx_struct_mod_residue.auth_asym_id P _pdbx_struct_mod_residue.auth_comp_id DOC _pdbx_struct_mod_residue.auth_seq_id 873 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DC _pdbx_struct_mod_residue.details "2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE" # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5000000000 -0.8660254038 0.0000000000 49.1645000000 -0.8660254038 -0.5000000000 0.0000000000 85.1554119287 0.0000000000 0.0000000000 -1.0000000000 33.6976666667 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O ? C LEU 35 ? A LEU 35 ? 1_555 88.0 ? 2 OD2 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 OD1 ? C ASP 126 ? A ASP 126 ? 1_555 96.7 ? 3 O ? C LEU 35 ? A LEU 35 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 OD1 ? C ASP 126 ? A ASP 126 ? 1_555 85.7 ? 4 OD2 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O1G ? F TTP . ? A TTP 875 ? 1_555 100.7 ? 5 O ? C LEU 35 ? A LEU 35 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O1G ? F TTP . ? A TTP 875 ? 1_555 88.7 ? 6 OD1 ? C ASP 126 ? A ASP 126 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O1G ? F TTP . ? A TTP 875 ? 1_555 161.5 ? 7 OD2 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O2B ? F TTP . ? A TTP 875 ? 1_555 176.8 ? 8 O ? C LEU 35 ? A LEU 35 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O2B ? F TTP . ? A TTP 875 ? 1_555 89.6 ? 9 OD1 ? C ASP 126 ? A ASP 126 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O2B ? F TTP . ? A TTP 875 ? 1_555 85.4 ? 10 O1G ? F TTP . ? A TTP 875 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O2B ? F TTP . ? A TTP 875 ? 1_555 77.0 ? 11 OD2 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O1A ? F TTP . ? A TTP 875 ? 1_555 112.8 ? 12 O ? C LEU 35 ? A LEU 35 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O1A ? F TTP . ? A TTP 875 ? 1_555 159.0 ? 13 OD1 ? C ASP 126 ? A ASP 126 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O1A ? F TTP . ? A TTP 875 ? 1_555 89.3 ? 14 O1G ? F TTP . ? A TTP 875 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O1A ? F TTP . ? A TTP 875 ? 1_555 89.7 ? 15 O2B ? F TTP . ? A TTP 875 ? 1_555 MG ? D MG . ? A MG 871 ? 1_555 O1A ? F TTP . ? A TTP 875 ? 1_555 69.7 ? 16 OD1 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? E MG . ? A MG 872 ? 1_555 OE2 ? C GLU 127 ? A GLU 127 ? 1_555 94.6 ? 17 OD1 ? C ASP 34 ? A ASP 34 ? 1_555 MG ? E MG . ? A MG 872 ? 1_555 O1A ? F TTP . ? A TTP 875 ? 1_555 117.1 ? 18 OE2 ? C GLU 127 ? A GLU 127 ? 1_555 MG ? E MG . ? A MG 872 ? 1_555 O1A ? F TTP . ? A TTP 875 ? 1_555 133.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-12-12 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_conn_type 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.conn_type_id' 17 4 'Structure model' '_struct_conn.id' 18 4 'Structure model' '_struct_conn.pdbx_dist_value' 19 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 20 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 21 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 28 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 34 4 'Structure model' '_struct_conn_type.id' 35 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 36 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 37 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 16.7455 16.7106 6.0272 0.3762 0.3406 0.3008 0.0020 -0.0176 0.0073 0.2213 0.4817 1.8633 -0.0496 0.2374 0.0083 0.0293 0.0060 0.0146 -0.0419 -0.1272 0.0376 0.0411 0.2142 0.0979 'X-RAY DIFFRACTION' 2 ? refined -4.4044 15.6492 23.5582 0.2998 0.2671 0.4249 -0.1277 0.0644 -0.1040 2.2683 1.7313 4.0924 -1.9023 -0.4525 -0.6094 -0.0536 0.0053 -0.3341 0.2017 -0.1276 0.5020 0.3059 -0.1050 0.1813 'X-RAY DIFFRACTION' 3 ? refined 0.8995 35.7830 -2.8189 0.3662 0.2071 0.4028 -0.0138 -0.1159 0.0178 2.2468 2.6253 2.9402 -0.7824 1.6880 1.3329 -0.2754 0.1562 0.4563 -0.0455 -0.1296 0.0135 -0.1402 -0.0584 0.4050 'X-RAY DIFFRACTION' 4 ? refined 7.4500 41.1194 33.0710 0.4185 0.2064 0.2438 -0.1439 0.1127 -0.2197 3.8226 5.1539 3.0538 1.5696 0.2424 -0.0204 0.4363 -0.0215 0.2199 0.9655 -0.3209 0.2638 -0.0649 0.0210 -0.1154 'X-RAY DIFFRACTION' 5 ? refined 4.9228 37.1365 17.3438 0.3816 0.2820 0.4513 -0.0996 -0.0073 -0.0996 0.6825 1.1662 0.9255 0.8340 -0.0988 -0.7907 0.0524 -0.0356 0.2657 -0.0104 -0.1475 0.5200 -0.1034 0.3238 0.0951 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 26 C 26 A 37 C 37 ? 'X-RAY DIFFRACTION' ? 2 1 A 99 C 99 A 224 C 224 ? 'X-RAY DIFFRACTION' ? 3 2 A 38 C 38 A 98 C 98 ? 'X-RAY DIFFRACTION' ? 4 3 A 225 C 225 A 287 C 287 ? 'X-RAY DIFFRACTION' ? 5 4 A 298 C 298 A 414 C 414 ? 'X-RAY DIFFRACTION' ? 6 5 T 839 B 3 T 847 B 11 ? 'X-RAY DIFFRACTION' ? 7 5 P 867 A 1 P 873 A 7 ? 'X-RAY DIFFRACTION' ? 8 5 A 875 F 1 A 875 F 1 ? 'X-RAY DIFFRACTION' ? 9 5 A 871 D 1 A 872 E 1 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 AMoRE phasing . ? 4 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 "O5'" P DA 867 ? ? 1_555 "O3'" T DT 847 ? ? 10_665 1.65 2 1 "C5'" P DA 867 ? ? 1_555 "O3'" T DT 847 ? ? 10_665 2.02 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O4'" P DA 867 ? ? "C4'" P DA 867 ? ? 1.517 1.449 0.068 0.009 N 2 1 C5 P DA 867 ? ? N7 P DA 867 ? ? 1.332 1.388 -0.056 0.006 N 3 1 N3 P DG 868 ? ? C4 P DG 868 ? ? 1.415 1.350 0.065 0.007 N 4 1 C5 P DG 869 ? ? N7 P DG 869 ? ? 1.484 1.388 0.096 0.006 N 5 1 "C2'" P DA 870 ? ? "C1'" P DA 870 ? ? 1.616 1.519 0.097 0.010 N 6 1 "O4'" P DA 870 ? ? "C4'" P DA 870 ? ? 1.511 1.449 0.062 0.009 N 7 1 "C3'" P DC 871 ? ? "C2'" P DC 871 ? ? 1.451 1.516 -0.065 0.008 N 8 1 "O4'" P DC 871 ? ? "C1'" P DC 871 ? ? 1.328 1.418 -0.090 0.012 N 9 1 "O3'" P DC 871 ? ? "C3'" P DC 871 ? ? 1.322 1.419 -0.097 0.006 N 10 1 "O3'" P DC 871 ? ? P P DC 872 ? ? 1.699 1.607 0.092 0.012 Y 11 1 P P DC 872 ? ? "O5'" P DC 872 ? ? 1.678 1.593 0.085 0.010 N 12 1 "C3'" P DC 872 ? ? "C2'" P DC 872 ? ? 1.445 1.516 -0.071 0.008 N 13 1 "O4'" P DC 872 ? ? "C1'" P DC 872 ? ? 1.288 1.418 -0.130 0.012 N 14 1 "O3'" P DC 872 ? ? "C3'" P DC 872 ? ? 1.323 1.419 -0.096 0.006 N 15 1 C2 P DC 872 ? ? N3 P DC 872 ? ? 1.304 1.353 -0.049 0.008 N 16 1 N3 P DC 872 ? ? C4 P DC 872 ? ? 1.413 1.335 0.078 0.007 N 17 1 "O5'" T DT 839 ? ? "C5'" T DT 839 ? ? 1.565 1.440 0.125 0.016 N 18 1 "C5'" T DT 839 ? ? "C4'" T DT 839 ? ? 1.574 1.512 0.062 0.007 N 19 1 "C4'" T DT 839 ? ? "C3'" T DT 839 ? ? 1.590 1.529 0.061 0.010 N 20 1 "O3'" T DT 839 ? ? "C3'" T DT 839 ? ? 1.525 1.435 0.090 0.013 N 21 1 C6 T DT 839 ? ? N1 T DT 839 ? ? 1.474 1.378 0.096 0.007 N 22 1 "O3'" T DT 839 ? ? P T DA 840 ? ? 1.711 1.607 0.104 0.012 Y 23 1 P T DA 840 ? ? "O5'" T DA 840 ? ? 1.656 1.593 0.063 0.010 N 24 1 C6 T DA 840 ? ? N1 T DA 840 ? ? 1.425 1.351 0.074 0.007 N 25 1 C5 T DA 840 ? ? N7 T DA 840 ? ? 1.295 1.388 -0.093 0.006 N 26 1 C8 T DA 840 ? ? N9 T DA 840 ? ? 1.313 1.373 -0.060 0.008 N 27 1 "C5'" T DG 841 ? ? "C4'" T DG 841 ? ? 1.436 1.509 -0.073 0.011 N 28 1 C4 T DG 841 ? ? C5 T DG 841 ? ? 1.327 1.379 -0.052 0.007 N 29 1 "O4'" T DG 842 ? ? "C4'" T DG 842 ? ? 1.508 1.449 0.059 0.009 N 30 1 "O3'" T DG 842 ? ? "C3'" T DG 842 ? ? 1.373 1.419 -0.046 0.006 N 31 1 "C2'" T DG 843 ? ? "C1'" T DG 843 ? ? 1.586 1.519 0.067 0.010 N 32 1 "O4'" T DG 843 ? ? "C1'" T DG 843 ? ? 1.237 1.418 -0.181 0.012 N 33 1 "O4'" T DG 843 ? ? "C4'" T DG 843 ? ? 1.520 1.449 0.071 0.009 N 34 1 "O3'" T DT 844 ? ? "C3'" T DT 844 ? ? 1.358 1.419 -0.061 0.006 N 35 1 N3 T DT 844 ? ? C4 T DT 844 ? ? 1.302 1.382 -0.080 0.008 N 36 1 C5 T DT 844 ? ? C7 T DT 844 ? ? 1.599 1.496 0.103 0.006 N 37 1 "O3'" T DT 844 ? ? P T DC 845 ? ? 1.692 1.607 0.085 0.012 Y 38 1 "O4'" T DC 845 ? ? "C1'" T DC 845 ? ? 1.317 1.418 -0.101 0.012 N 39 1 "C2'" T DC 846 ? ? "C1'" T DC 846 ? ? 1.605 1.519 0.086 0.010 N 40 1 "O3'" T DC 846 ? ? "C3'" T DC 846 ? ? 1.376 1.419 -0.043 0.006 N 41 1 N3 T DC 846 ? ? C4 T DC 846 ? ? 1.386 1.335 0.051 0.007 N 42 1 C5 T DC 846 ? ? C6 T DC 846 ? ? 1.392 1.339 0.053 0.008 N 43 1 "O4'" T DT 847 ? ? "C1'" T DT 847 ? ? 1.312 1.418 -0.106 0.012 N 44 1 C5 T DT 847 ? ? C7 T DT 847 ? ? 1.577 1.496 0.081 0.006 N 45 1 CA A ALA 25 ? ? CB A ALA 25 ? ? 1.671 1.520 0.151 0.021 N 46 1 C A SER 27 ? ? O A SER 27 ? ? 1.115 1.229 -0.114 0.019 N 47 1 CB A TYR 39 ? ? CG A TYR 39 ? ? 1.629 1.512 0.117 0.015 N 48 1 CE2 A TYR 39 ? ? CD2 A TYR 39 ? ? 1.281 1.389 -0.108 0.015 N 49 1 CB A VAL 64 ? ? CG1 A VAL 64 ? ? 1.669 1.524 0.145 0.021 N 50 1 CA A CYS 66 ? ? CB A CYS 66 ? ? 1.445 1.526 -0.081 0.013 N 51 1 CA A ARG 82 ? ? CB A ARG 82 ? ? 1.668 1.535 0.133 0.022 N 52 1 CB A VAL 94 ? ? CG2 A VAL 94 ? ? 1.357 1.524 -0.167 0.021 N 53 1 CG A TYR 102 ? ? CD2 A TYR 102 ? ? 1.465 1.387 0.078 0.013 N 54 1 CZ A ARG 103 ? ? NH2 A ARG 103 ? ? 1.441 1.326 0.115 0.013 N 55 1 CD A GLU 104 ? ? OE2 A GLU 104 ? ? 1.324 1.252 0.072 0.011 N 56 1 CE2 A TYR 107 ? ? CD2 A TYR 107 ? ? 1.292 1.389 -0.097 0.015 N 57 1 CE A LYS 108 ? ? NZ A LYS 108 ? ? 1.641 1.486 0.155 0.025 N 58 1 C A PHE 116 ? ? O A PHE 116 ? ? 1.107 1.229 -0.122 0.019 N 59 1 CB A SER 117 ? ? OG A SER 117 ? ? 1.500 1.418 0.082 0.013 N 60 1 CD1 A PHE 129 ? ? CE1 A PHE 129 ? ? 1.516 1.388 0.128 0.020 N 61 1 CD A GLU 134 ? ? OE1 A GLU 134 ? ? 1.325 1.252 0.073 0.011 N 62 1 CG A GLU 147 ? ? CD A GLU 147 ? ? 1.605 1.515 0.090 0.015 N 63 1 CA A GLY 155 ? ? C A GLY 155 ? ? 1.615 1.514 0.101 0.016 N 64 1 CD A ARG 184 ? ? NE A ARG 184 ? ? 1.340 1.460 -0.120 0.017 N 65 1 CD A GLU 185 ? ? OE2 A GLU 185 ? ? 1.336 1.252 0.084 0.011 N 66 1 CA A ALA 186 ? ? CB A ALA 186 ? ? 1.347 1.520 -0.173 0.021 N 67 1 CB A ASN 189 ? ? CG A ASN 189 ? ? 1.677 1.506 0.171 0.023 N 68 1 CA A LYS 214 ? ? C A LYS 214 ? ? 1.331 1.525 -0.194 0.026 N 69 1 N A ASN 216 ? ? CA A ASN 216 ? ? 1.596 1.459 0.137 0.020 N 70 1 CD A LYS 248 ? ? CE A LYS 248 ? ? 1.670 1.508 0.162 0.025 N 71 1 CE A LYS 283 ? ? NZ A LYS 283 ? ? 1.656 1.486 0.170 0.025 N 72 1 CD1 A PHE 286 ? ? CE1 A PHE 286 ? ? 1.531 1.388 0.143 0.020 N 73 1 CZ A PHE 286 ? ? CE2 A PHE 286 ? ? 1.486 1.369 0.117 0.019 N 74 1 CD A GLU 288 ? ? OE2 A GLU 288 ? ? 1.343 1.252 0.091 0.011 N 75 1 CB A ASN 290 ? ? CG A ASN 290 ? ? 1.648 1.506 0.142 0.023 N 76 1 CB A VAL 293 ? ? CG1 A VAL 293 ? ? 1.396 1.524 -0.128 0.021 N 77 1 N A GLY 297 ? ? CA A GLY 297 ? ? 1.360 1.456 -0.096 0.015 N 78 1 CD1 A PHE 302 ? ? CE1 A PHE 302 ? ? 1.519 1.388 0.131 0.020 N 79 1 CD A GLU 304 ? ? OE1 A GLU 304 ? ? 1.333 1.252 0.081 0.011 N 80 1 CA A LYS 310 ? ? CB A LYS 310 ? ? 1.694 1.535 0.159 0.022 N 81 1 CB A CYS 362 ? ? SG A CYS 362 ? ? 1.716 1.812 -0.096 0.016 N 82 1 CG A MET 380 ? ? SD A MET 380 ? ? 1.978 1.807 0.171 0.026 N 83 1 CA A LYS 389 ? ? CB A LYS 389 ? ? 1.693 1.535 0.158 0.022 N 84 1 CA A LEU 405 ? ? CB A LEU 405 ? ? 1.374 1.533 -0.159 0.023 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" P DA 867 ? ? "C5'" P DA 867 ? ? "C4'" P DA 867 ? ? 131.16 111.00 20.16 2.50 N 2 1 "O4'" P DA 867 ? ? "C4'" P DA 867 ? ? "C3'" P DA 867 ? ? 96.82 104.50 -7.68 0.40 N 3 1 "C1'" P DA 867 ? ? "O4'" P DA 867 ? ? "C4'" P DA 867 ? ? 118.77 110.30 8.47 0.70 N 4 1 "O4'" P DA 867 ? ? "C1'" P DA 867 ? ? "C2'" P DA 867 ? ? 100.70 105.90 -5.20 0.80 N 5 1 "O4'" P DA 867 ? ? "C1'" P DA 867 ? ? N9 P DA 867 ? ? 116.20 108.30 7.90 0.30 N 6 1 C6 P DA 867 ? ? N1 P DA 867 ? ? C2 P DA 867 ? ? 113.93 118.60 -4.67 0.60 N 7 1 C8 P DA 867 ? ? N9 P DA 867 ? ? C4 P DA 867 ? ? 102.10 105.80 -3.70 0.40 N 8 1 N1 P DA 867 ? ? C6 P DA 867 ? ? N6 P DA 867 ? ? 114.01 118.60 -4.59 0.60 N 9 1 "C3'" P DA 867 ? ? "O3'" P DA 867 ? ? P P DG 868 ? ? 128.06 119.70 8.36 1.20 Y 10 1 "C3'" P DG 868 ? ? "C2'" P DG 868 ? ? "C1'" P DG 868 ? ? 97.53 102.40 -4.87 0.80 N 11 1 "O4'" P DG 868 ? ? "C1'" P DG 868 ? ? N9 P DG 868 ? ? 111.15 108.30 2.85 0.30 N 12 1 C8 P DG 869 ? ? N9 P DG 869 ? ? C4 P DG 869 ? ? 108.84 106.40 2.44 0.40 N 13 1 "C3'" P DG 869 ? ? "O3'" P DG 869 ? ? P P DA 870 ? ? 109.19 119.70 -10.51 1.20 Y 14 1 "O4'" P DA 870 ? ? "C4'" P DA 870 ? ? "C3'" P DA 870 ? ? 112.58 106.00 6.58 0.60 N 15 1 "O4'" P DA 870 ? ? "C1'" P DA 870 ? ? "C2'" P DA 870 ? ? 110.73 106.80 3.93 0.50 N 16 1 "O4'" P DA 870 ? ? "C1'" P DA 870 ? ? N9 P DA 870 ? ? 110.56 108.30 2.26 0.30 N 17 1 N1 P DA 870 ? ? C2 P DA 870 ? ? N3 P DA 870 ? ? 133.51 129.30 4.21 0.50 N 18 1 C2 P DA 870 ? ? N3 P DA 870 ? ? C4 P DA 870 ? ? 106.87 110.60 -3.73 0.50 N 19 1 C5 P DA 870 ? ? N7 P DA 870 ? ? C8 P DA 870 ? ? 100.17 103.90 -3.73 0.50 N 20 1 N1 P DA 870 ? ? C6 P DA 870 ? ? N6 P DA 870 ? ? 122.93 118.60 4.33 0.60 N 21 1 C5 P DA 870 ? ? C6 P DA 870 ? ? N6 P DA 870 ? ? 118.81 123.70 -4.89 0.80 N 22 1 "O3'" P DA 870 ? ? P P DC 871 ? ? OP2 P DC 871 ? ? 118.54 110.50 8.04 1.10 Y 23 1 "O4'" P DC 871 ? ? "C4'" P DC 871 ? ? "C3'" P DC 871 ? ? 110.25 106.00 4.25 0.60 N 24 1 "C4'" P DC 871 ? ? "C3'" P DC 871 ? ? "O3'" P DC 871 ? ? 124.80 112.30 12.50 2.00 N 25 1 C2 P DC 871 ? ? N3 P DC 871 ? ? C4 P DC 871 ? ? 123.72 119.90 3.82 0.50 N 26 1 N3 P DC 871 ? ? C4 P DC 871 ? ? C5 P DC 871 ? ? 118.47 121.90 -3.43 0.40 N 27 1 "O4'" P DC 872 ? ? "C4'" P DC 872 ? ? "C3'" P DC 872 ? ? 110.61 106.00 4.61 0.60 N 28 1 "C4'" P DC 872 ? ? "C3'" P DC 872 ? ? "O3'" P DC 872 ? ? 126.58 112.30 14.28 2.00 N 29 1 "O4'" T DT 839 ? ? "C1'" T DT 839 ? ? "C2'" T DT 839 ? ? 110.77 106.80 3.97 0.50 N 30 1 "O4'" T DT 839 ? ? "C1'" T DT 839 ? ? N1 T DT 839 ? ? 114.10 108.30 5.80 0.30 N 31 1 N3 T DT 839 ? ? C4 T DT 839 ? ? C5 T DT 839 ? ? 119.16 115.20 3.96 0.60 N 32 1 C5 T DT 839 ? ? C4 T DT 839 ? ? O4 T DT 839 ? ? 120.56 124.90 -4.34 0.70 N 33 1 "C3'" T DT 839 ? ? "O3'" T DT 839 ? ? P T DA 840 ? ? 131.71 119.70 12.01 1.20 Y 34 1 "O3'" T DT 839 ? ? P T DA 840 ? ? OP2 T DA 840 ? ? 118.25 110.50 7.75 1.10 Y 35 1 "O3'" T DT 839 ? ? P T DA 840 ? ? OP1 T DA 840 ? ? 120.45 110.50 9.95 1.10 Y 36 1 OP1 T DA 840 ? ? P T DA 840 ? ? OP2 T DA 840 ? ? 103.35 119.60 -16.25 1.50 N 37 1 N7 T DA 840 ? ? C8 T DA 840 ? ? N9 T DA 840 ? ? 118.67 113.80 4.87 0.50 N 38 1 C8 T DA 840 ? ? N9 T DA 840 ? ? C4 T DA 840 ? ? 100.41 105.80 -5.39 0.40 N 39 1 N9 T DA 840 ? ? C4 T DA 840 ? ? C5 T DA 840 ? ? 108.59 105.80 2.79 0.40 N 40 1 "O4'" T DG 842 ? ? "C4'" T DG 842 ? ? "C3'" T DG 842 ? ? 110.47 106.00 4.47 0.60 N 41 1 "C4'" T DG 842 ? ? "C3'" T DG 842 ? ? "C2'" T DG 842 ? ? 96.18 102.20 -6.02 0.70 N 42 1 "C3'" T DG 842 ? ? "C2'" T DG 842 ? ? "C1'" T DG 842 ? ? 115.24 102.50 12.74 1.20 N 43 1 "O4'" T DG 842 ? ? "C1'" T DG 842 ? ? "C2'" T DG 842 ? ? 98.91 105.90 -6.99 0.80 N 44 1 "O4'" T DG 843 ? ? "C4'" T DG 843 ? ? "C3'" T DG 843 ? ? 109.75 106.00 3.75 0.60 N 45 1 "C4'" T DG 843 ? ? "C3'" T DG 843 ? ? "C2'" T DG 843 ? ? 93.54 102.20 -8.66 0.70 N 46 1 "O4'" T DG 843 ? ? "C1'" T DG 843 ? ? "C2'" T DG 843 ? ? 99.67 105.90 -6.23 0.80 N 47 1 "C5'" T DT 844 ? ? "C4'" T DT 844 ? ? "C3'" T DT 844 ? ? 101.82 114.10 -12.28 1.80 N 48 1 "O4'" T DT 844 ? ? "C1'" T DT 844 ? ? N1 T DT 844 ? ? 111.29 108.30 2.99 0.30 N 49 1 C4 T DT 844 ? ? C5 T DT 844 ? ? C6 T DT 844 ? ? 110.79 118.00 -7.21 0.60 N 50 1 C5 T DT 844 ? ? C6 T DT 844 ? ? N1 T DT 844 ? ? 128.14 123.70 4.44 0.60 N 51 1 C4 T DT 844 ? ? C5 T DT 844 ? ? C7 T DT 844 ? ? 126.36 119.00 7.36 0.60 N 52 1 "O5'" T DC 845 ? ? "C5'" T DC 845 ? ? "C4'" T DC 845 ? ? 104.57 109.40 -4.83 0.80 N 53 1 "O4'" T DC 846 ? ? "C1'" T DC 846 ? ? N1 T DC 846 ? ? 102.80 108.00 -5.20 0.70 N 54 1 "O4'" T DT 847 ? ? "C4'" T DT 847 ? ? "C3'" T DT 847 ? ? 112.47 106.00 6.47 0.60 N 55 1 "C4'" T DT 847 ? ? "C3'" T DT 847 ? ? "O3'" T DT 847 ? ? 127.32 112.30 15.02 2.00 N 56 1 "C4'" T DT 847 ? ? "C3'" T DT 847 ? ? "C2'" T DT 847 ? ? 96.44 102.20 -5.76 0.70 N 57 1 "O4'" T DT 847 ? ? "C1'" T DT 847 ? ? "C2'" T DT 847 ? ? 110.07 106.80 3.27 0.50 N 58 1 OE1 A GLU 69 ? ? CD A GLU 69 ? ? OE2 A GLU 69 ? ? 115.25 123.30 -8.05 1.20 N 59 1 NE A ARG 71 ? ? CZ A ARG 71 ? ? NH1 A ARG 71 ? ? 124.36 120.30 4.06 0.50 N 60 1 NE A ARG 71 ? ? CZ A ARG 71 ? ? NH2 A ARG 71 ? ? 116.45 120.30 -3.85 0.50 N 61 1 NE A ARG 122 ? ? CZ A ARG 122 ? ? NH1 A ARG 122 ? ? 123.75 120.30 3.45 0.50 N 62 1 NE A ARG 122 ? ? CZ A ARG 122 ? ? NH2 A ARG 122 ? ? 116.43 120.30 -3.87 0.50 N 63 1 OE1 A GLU 147 ? ? CD A GLU 147 ? ? OE2 A GLU 147 ? ? 115.32 123.30 -7.98 1.20 N 64 1 NE A ARG 184 ? ? CZ A ARG 184 ? ? NH1 A ARG 184 ? ? 124.94 120.30 4.64 0.50 N 65 1 NE A ARG 184 ? ? CZ A ARG 184 ? ? NH2 A ARG 184 ? ? 115.89 120.30 -4.41 0.50 N 66 1 CA A LEU 204 ? ? CB A LEU 204 ? ? CG A LEU 204 ? ? 130.01 115.30 14.71 2.30 N 67 1 NE A ARG 343 ? ? CZ A ARG 343 ? ? NH1 A ARG 343 ? ? 125.48 120.30 5.18 0.50 N 68 1 NE A ARG 343 ? ? CZ A ARG 343 ? ? NH2 A ARG 343 ? ? 115.63 120.30 -4.67 0.50 N 69 1 CB A ARG 347 ? ? CA A ARG 347 ? ? C A ARG 347 ? ? 123.10 110.40 12.70 2.00 N 70 1 NE A ARG 357 ? ? CZ A ARG 357 ? ? NH1 A ARG 357 ? ? 125.79 120.30 5.49 0.50 N 71 1 NE A ARG 357 ? ? CZ A ARG 357 ? ? NH2 A ARG 357 ? ? 116.59 120.30 -3.71 0.50 N 72 1 NE A ARG 360 ? ? CZ A ARG 360 ? ? NH2 A ARG 360 ? ? 117.28 120.30 -3.02 0.50 N 73 1 CB A MET 394 ? ? CA A MET 394 ? ? C A MET 394 ? ? 96.73 110.40 -13.67 2.00 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 26 ? ? -112.99 -80.52 2 1 CYS A 37 ? ? 15.71 58.11 3 1 ASP A 52 ? ? 54.89 -10.21 4 1 LYS A 60 ? ? 59.39 -120.47 5 1 CYS A 88 ? ? -173.84 83.46 6 1 GLN A 90 ? ? -65.49 86.57 7 1 ASP A 146 ? ? -168.20 -53.08 8 1 PRO A 215 ? ? -66.20 -85.18 9 1 LYS A 271 ? ? -89.59 32.37 10 1 GLU A 272 ? ? -159.92 -8.43 11 1 ASP A 289 ? ? -160.98 114.41 12 1 PHE A 308 ? ? 170.49 127.96 13 1 LYS A 310 ? ? 27.67 30.34 14 1 SER A 313 ? ? -25.93 -86.39 15 1 GLU A 314 ? ? 174.57 41.71 16 1 VAL A 315 ? ? 151.32 -4.79 17 1 GLN A 334 ? ? -24.67 -52.10 18 1 SER A 350 ? ? -156.72 -145.41 19 1 SER A 351 ? ? -97.16 37.87 20 1 GLU A 352 ? ? 81.14 34.10 21 1 HIS A 354 ? ? 15.85 -71.16 22 1 TYR A 355 ? ? -14.19 -39.66 23 1 SER A 366 ? ? -47.80 -15.75 24 1 ILE A 369 ? ? -59.61 5.67 25 1 ASN A 393 ? ? -51.74 -4.39 26 1 LEU A 405 ? ? 174.81 148.89 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 PHE _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 213 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 LYS _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 214 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -146.01 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC P 871 ? ? 0.078 'SIDE CHAIN' 2 1 DC P 872 ? ? 0.062 'SIDE CHAIN' 3 1 DG T 842 ? ? 0.068 'SIDE CHAIN' 4 1 DG T 843 ? ? 0.070 'SIDE CHAIN' 5 1 TYR A 68 ? ? 0.074 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 T DT 839 ? P ? B DT 3 P 2 1 Y 1 T DT 839 ? OP1 ? B DT 3 OP1 3 1 Y 1 T DT 839 ? OP2 ? B DT 3 OP2 4 1 Y 1 A TYR 61 ? CG ? C TYR 61 CG 5 1 Y 1 A TYR 61 ? CD1 ? C TYR 61 CD1 6 1 Y 1 A TYR 61 ? CD2 ? C TYR 61 CD2 7 1 Y 1 A TYR 61 ? CE1 ? C TYR 61 CE1 8 1 Y 1 A TYR 61 ? CE2 ? C TYR 61 CE2 9 1 Y 1 A TYR 61 ? CZ ? C TYR 61 CZ 10 1 Y 1 A TYR 61 ? OH ? C TYR 61 OH 11 1 Y 1 A ARG 82 ? CG ? C ARG 82 CG 12 1 Y 1 A ARG 82 ? CD ? C ARG 82 CD 13 1 Y 1 A ARG 82 ? NE ? C ARG 82 NE 14 1 Y 1 A ARG 82 ? CZ ? C ARG 82 CZ 15 1 Y 1 A ARG 82 ? NH1 ? C ARG 82 NH1 16 1 Y 1 A ARG 82 ? NH2 ? C ARG 82 NH2 17 1 Y 1 A ASP 146 ? CG ? C ASP 146 CG 18 1 Y 1 A ASP 146 ? OD1 ? C ASP 146 OD1 19 1 Y 1 A ASP 146 ? OD2 ? C ASP 146 OD2 20 1 Y 1 A LYS 245 ? CG ? C LYS 245 CG 21 1 Y 1 A LYS 245 ? CD ? C LYS 245 CD 22 1 Y 1 A LYS 245 ? CE ? C LYS 245 CE 23 1 Y 1 A LYS 245 ? NZ ? C LYS 245 NZ 24 1 Y 1 A LYS 271 ? CG ? C LYS 271 CG 25 1 Y 1 A LYS 271 ? CD ? C LYS 271 CD 26 1 Y 1 A LYS 271 ? CE ? C LYS 271 CE 27 1 Y 1 A LYS 271 ? NZ ? C LYS 271 NZ 28 1 Y 1 A LYS 310 ? CG ? C LYS 310 CG 29 1 Y 1 A LYS 310 ? CD ? C LYS 310 CD 30 1 Y 1 A LYS 310 ? CE ? C LYS 310 CE 31 1 Y 1 A LYS 310 ? NZ ? C LYS 310 NZ 32 1 Y 1 A VAL 315 ? CG1 ? C VAL 315 CG1 33 1 Y 1 A VAL 315 ? CG2 ? C VAL 315 CG2 34 1 Y 1 A GLU 316 ? CG ? C GLU 316 CG 35 1 Y 1 A GLU 316 ? CD ? C GLU 316 CD 36 1 Y 1 A GLU 316 ? OE1 ? C GLU 316 OE1 37 1 Y 1 A GLU 316 ? OE2 ? C GLU 316 OE2 38 1 Y 1 A LYS 338 ? CG ? C LYS 338 CG 39 1 Y 1 A LYS 338 ? CD ? C LYS 338 CD 40 1 Y 1 A LYS 338 ? CE ? C LYS 338 CE 41 1 Y 1 A LYS 338 ? NZ ? C LYS 338 NZ 42 1 Y 1 A TYR 349 ? CG ? C TYR 349 CG 43 1 Y 1 A TYR 349 ? CD1 ? C TYR 349 CD1 44 1 Y 1 A TYR 349 ? CD2 ? C TYR 349 CD2 45 1 Y 1 A TYR 349 ? CE1 ? C TYR 349 CE1 46 1 Y 1 A TYR 349 ? CE2 ? C TYR 349 CE2 47 1 Y 1 A TYR 349 ? CZ ? C TYR 349 CZ 48 1 Y 1 A TYR 349 ? OH ? C TYR 349 OH 49 1 Y 1 A GLU 352 ? CG ? C GLU 352 CG 50 1 Y 1 A GLU 352 ? CD ? C GLU 352 CD 51 1 Y 1 A GLU 352 ? OE1 ? C GLU 352 OE1 52 1 Y 1 A GLU 352 ? OE2 ? C GLU 352 OE2 53 1 Y 1 A LYS 353 ? CG ? C LYS 353 CG 54 1 Y 1 A LYS 353 ? CD ? C LYS 353 CD 55 1 Y 1 A LYS 353 ? CE ? C LYS 353 CE 56 1 Y 1 A LYS 353 ? NZ ? C LYS 353 NZ 57 1 Y 1 A HIS 354 ? CG ? C HIS 354 CG 58 1 Y 1 A HIS 354 ? ND1 ? C HIS 354 ND1 59 1 Y 1 A HIS 354 ? CD2 ? C HIS 354 CD2 60 1 Y 1 A HIS 354 ? CE1 ? C HIS 354 CE1 61 1 Y 1 A HIS 354 ? NE2 ? C HIS 354 NE2 62 1 Y 1 A TYR 355 ? CG ? C TYR 355 CG 63 1 Y 1 A TYR 355 ? CD1 ? C TYR 355 CD1 64 1 Y 1 A TYR 355 ? CD2 ? C TYR 355 CD2 65 1 Y 1 A TYR 355 ? CE1 ? C TYR 355 CE1 66 1 Y 1 A TYR 355 ? CE2 ? C TYR 355 CE2 67 1 Y 1 A TYR 355 ? CZ ? C TYR 355 CZ 68 1 Y 1 A TYR 355 ? OH ? C TYR 355 OH 69 1 Y 1 A VAL 379 ? CG1 ? C VAL 379 CG1 70 1 Y 1 A VAL 379 ? CG2 ? C VAL 379 CG2 71 1 Y 1 A ASP 385 ? CG ? C ASP 385 CG 72 1 Y 1 A ASP 385 ? OD1 ? C ASP 385 OD1 73 1 Y 1 A ASP 385 ? OD2 ? C ASP 385 OD2 74 1 Y 1 A LYS 389 ? CG ? C LYS 389 CG 75 1 Y 1 A LYS 389 ? CD ? C LYS 389 CD 76 1 Y 1 A LYS 389 ? CE ? C LYS 389 CE 77 1 Y 1 A LYS 389 ? NZ ? C LYS 389 NZ 78 1 Y 1 A LEU 405 ? CG ? C LEU 405 CG 79 1 Y 1 A LEU 405 ? CD1 ? C LEU 405 CD1 80 1 Y 1 A LEU 405 ? CD2 ? C LEU 405 CD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 T DT 837 ? B DT 1 2 1 Y 1 T DC 838 ? B DC 2 3 1 Y 1 A MET 1 ? C MET 1 4 1 Y 1 A GLU 2 ? C GLU 2 5 1 Y 1 A LEU 3 ? C LEU 3 6 1 Y 1 A ALA 4 ? C ALA 4 7 1 Y 1 A ASP 5 ? C ASP 5 8 1 Y 1 A VAL 6 ? C VAL 6 9 1 Y 1 A GLY 7 ? C GLY 7 10 1 Y 1 A ALA 8 ? C ALA 8 11 1 Y 1 A ALA 9 ? C ALA 9 12 1 Y 1 A ALA 10 ? C ALA 10 13 1 Y 1 A SER 11 ? C SER 11 14 1 Y 1 A SER 12 ? C SER 12 15 1 Y 1 A GLN 13 ? C GLN 13 16 1 Y 1 A GLY 14 ? C GLY 14 17 1 Y 1 A VAL 15 ? C VAL 15 18 1 Y 1 A HIS 16 ? C HIS 16 19 1 Y 1 A ASP 17 ? C ASP 17 20 1 Y 1 A GLN 18 ? C GLN 18 21 1 Y 1 A VAL 19 ? C VAL 19 22 1 Y 1 A LEU 20 ? C LEU 20 23 1 Y 1 A PRO 21 ? C PRO 21 24 1 Y 1 A THR 22 ? C THR 22 25 1 Y 1 A PRO 23 ? C PRO 23 26 1 Y 1 A ASN 24 ? C ASN 24 27 1 Y 1 A LYS 371 ? C LYS 371 28 1 Y 1 A LEU 372 ? C LEU 372 29 1 Y 1 A GLY 373 ? C GLY 373 30 1 Y 1 A THR 374 ? C THR 374 31 1 Y 1 A GLY 375 ? C GLY 375 32 1 Y 1 A ASN 376 ? C ASN 376 33 1 Y 1 A TYR 377 ? C TYR 377 34 1 Y 1 A ASP 378 ? C ASP 378 35 1 Y 1 A VAL 395 ? C VAL 395 36 1 Y 1 A ASN 396 ? C ASN 396 37 1 Y 1 A VAL 397 ? C VAL 397 38 1 Y 1 A LYS 398 ? C LYS 398 39 1 Y 1 A MET 399 ? C MET 399 40 1 Y 1 A PRO 400 ? C PRO 400 41 1 Y 1 A PHE 401 ? C PHE 401 42 1 Y 1 A HIS 402 ? C HIS 402 43 1 Y 1 A LEU 403 ? C LEU 403 44 1 Y 1 A ALA 415 ? C ALA 415 45 1 Y 1 A LEU 416 ? C LEU 416 46 1 Y 1 A ASN 417 ? C ASN 417 47 1 Y 1 A THR 418 ? C THR 418 48 1 Y 1 A ALA 419 ? C ALA 419 49 1 Y 1 A LYS 420 ? C LYS 420 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DOC N1 N N N 195 DOC C2 C N N 196 DOC N3 N N N 197 DOC C4 C N N 198 DOC C5 C N N 199 DOC C6 C N N 200 DOC O2 O N N 201 DOC N4 N N N 202 DOC "C1'" C N R 203 DOC "C2'" C N N 204 DOC "C3'" C N N 205 DOC "C4'" C N S 206 DOC "O4'" O N N 207 DOC "C5'" C N N 208 DOC "O5'" O N N 209 DOC P P N N 210 DOC OP1 O N N 211 DOC OP2 O N N 212 DOC OP3 O N N 213 DOC H5 H N N 214 DOC H6 H N N 215 DOC HN41 H N N 216 DOC HN42 H N N 217 DOC "H1'" H N N 218 DOC "H2'" H N N 219 DOC "H2''" H N N 220 DOC "H3'1" H N N 221 DOC "H3'2" H N N 222 DOC "H4'" H N N 223 DOC "H5'" H N N 224 DOC "H5''" H N N 225 DOC HOP2 H N N 226 DOC HOP3 H N N 227 DT OP3 O N N 228 DT P P N N 229 DT OP1 O N N 230 DT OP2 O N N 231 DT "O5'" O N N 232 DT "C5'" C N N 233 DT "C4'" C N R 234 DT "O4'" O N N 235 DT "C3'" C N S 236 DT "O3'" O N N 237 DT "C2'" C N N 238 DT "C1'" C N R 239 DT N1 N N N 240 DT C2 C N N 241 DT O2 O N N 242 DT N3 N N N 243 DT C4 C N N 244 DT O4 O N N 245 DT C5 C N N 246 DT C7 C N N 247 DT C6 C N N 248 DT HOP3 H N N 249 DT HOP2 H N N 250 DT "H5'" H N N 251 DT "H5''" H N N 252 DT "H4'" H N N 253 DT "H3'" H N N 254 DT "HO3'" H N N 255 DT "H2'" H N N 256 DT "H2''" H N N 257 DT "H1'" H N N 258 DT H3 H N N 259 DT H71 H N N 260 DT H72 H N N 261 DT H73 H N N 262 DT H6 H N N 263 GLN N N N N 264 GLN CA C N S 265 GLN C C N N 266 GLN O O N N 267 GLN CB C N N 268 GLN CG C N N 269 GLN CD C N N 270 GLN OE1 O N N 271 GLN NE2 N N N 272 GLN OXT O N N 273 GLN H H N N 274 GLN H2 H N N 275 GLN HA H N N 276 GLN HB2 H N N 277 GLN HB3 H N N 278 GLN HG2 H N N 279 GLN HG3 H N N 280 GLN HE21 H N N 281 GLN HE22 H N N 282 GLN HXT H N N 283 GLU N N N N 284 GLU CA C N S 285 GLU C C N N 286 GLU O O N N 287 GLU CB C N N 288 GLU CG C N N 289 GLU CD C N N 290 GLU OE1 O N N 291 GLU OE2 O N N 292 GLU OXT O N N 293 GLU H H N N 294 GLU H2 H N N 295 GLU HA H N N 296 GLU HB2 H N N 297 GLU HB3 H N N 298 GLU HG2 H N N 299 GLU HG3 H N N 300 GLU HE2 H N N 301 GLU HXT H N N 302 GLY N N N N 303 GLY CA C N N 304 GLY C C N N 305 GLY O O N N 306 GLY OXT O N N 307 GLY H H N N 308 GLY H2 H N N 309 GLY HA2 H N N 310 GLY HA3 H N N 311 GLY HXT H N N 312 HIS N N N N 313 HIS CA C N S 314 HIS C C N N 315 HIS O O N N 316 HIS CB C N N 317 HIS CG C Y N 318 HIS ND1 N Y N 319 HIS CD2 C Y N 320 HIS CE1 C Y N 321 HIS NE2 N Y N 322 HIS OXT O N N 323 HIS H H N N 324 HIS H2 H N N 325 HIS HA H N N 326 HIS HB2 H N N 327 HIS HB3 H N N 328 HIS HD1 H N N 329 HIS HD2 H N N 330 HIS HE1 H N N 331 HIS HE2 H N N 332 HIS HXT H N N 333 HOH O O N N 334 HOH H1 H N N 335 HOH H2 H N N 336 ILE N N N N 337 ILE CA C N S 338 ILE C C N N 339 ILE O O N N 340 ILE CB C N S 341 ILE CG1 C N N 342 ILE CG2 C N N 343 ILE CD1 C N N 344 ILE OXT O N N 345 ILE H H N N 346 ILE H2 H N N 347 ILE HA H N N 348 ILE HB H N N 349 ILE HG12 H N N 350 ILE HG13 H N N 351 ILE HG21 H N N 352 ILE HG22 H N N 353 ILE HG23 H N N 354 ILE HD11 H N N 355 ILE HD12 H N N 356 ILE HD13 H N N 357 ILE HXT H N N 358 LEU N N N N 359 LEU CA C N S 360 LEU C C N N 361 LEU O O N N 362 LEU CB C N N 363 LEU CG C N N 364 LEU CD1 C N N 365 LEU CD2 C N N 366 LEU OXT O N N 367 LEU H H N N 368 LEU H2 H N N 369 LEU HA H N N 370 LEU HB2 H N N 371 LEU HB3 H N N 372 LEU HG H N N 373 LEU HD11 H N N 374 LEU HD12 H N N 375 LEU HD13 H N N 376 LEU HD21 H N N 377 LEU HD22 H N N 378 LEU HD23 H N N 379 LEU HXT H N N 380 LYS N N N N 381 LYS CA C N S 382 LYS C C N N 383 LYS O O N N 384 LYS CB C N N 385 LYS CG C N N 386 LYS CD C N N 387 LYS CE C N N 388 LYS NZ N N N 389 LYS OXT O N N 390 LYS H H N N 391 LYS H2 H N N 392 LYS HA H N N 393 LYS HB2 H N N 394 LYS HB3 H N N 395 LYS HG2 H N N 396 LYS HG3 H N N 397 LYS HD2 H N N 398 LYS HD3 H N N 399 LYS HE2 H N N 400 LYS HE3 H N N 401 LYS HZ1 H N N 402 LYS HZ2 H N N 403 LYS HZ3 H N N 404 LYS HXT H N N 405 MET N N N N 406 MET CA C N S 407 MET C C N N 408 MET O O N N 409 MET CB C N N 410 MET CG C N N 411 MET SD S N N 412 MET CE C N N 413 MET OXT O N N 414 MET H H N N 415 MET H2 H N N 416 MET HA H N N 417 MET HB2 H N N 418 MET HB3 H N N 419 MET HG2 H N N 420 MET HG3 H N N 421 MET HE1 H N N 422 MET HE2 H N N 423 MET HE3 H N N 424 MET HXT H N N 425 MG MG MG N N 426 PHE N N N N 427 PHE CA C N S 428 PHE C C N N 429 PHE O O N N 430 PHE CB C N N 431 PHE CG C Y N 432 PHE CD1 C Y N 433 PHE CD2 C Y N 434 PHE CE1 C Y N 435 PHE CE2 C Y N 436 PHE CZ C Y N 437 PHE OXT O N N 438 PHE H H N N 439 PHE H2 H N N 440 PHE HA H N N 441 PHE HB2 H N N 442 PHE HB3 H N N 443 PHE HD1 H N N 444 PHE HD2 H N N 445 PHE HE1 H N N 446 PHE HE2 H N N 447 PHE HZ H N N 448 PHE HXT H N N 449 PRO N N N N 450 PRO CA C N S 451 PRO C C N N 452 PRO O O N N 453 PRO CB C N N 454 PRO CG C N N 455 PRO CD C N N 456 PRO OXT O N N 457 PRO H H N N 458 PRO HA H N N 459 PRO HB2 H N N 460 PRO HB3 H N N 461 PRO HG2 H N N 462 PRO HG3 H N N 463 PRO HD2 H N N 464 PRO HD3 H N N 465 PRO HXT H N N 466 SER N N N N 467 SER CA C N S 468 SER C C N N 469 SER O O N N 470 SER CB C N N 471 SER OG O N N 472 SER OXT O N N 473 SER H H N N 474 SER H2 H N N 475 SER HA H N N 476 SER HB2 H N N 477 SER HB3 H N N 478 SER HG H N N 479 SER HXT H N N 480 THR N N N N 481 THR CA C N S 482 THR C C N N 483 THR O O N N 484 THR CB C N R 485 THR OG1 O N N 486 THR CG2 C N N 487 THR OXT O N N 488 THR H H N N 489 THR H2 H N N 490 THR HA H N N 491 THR HB H N N 492 THR HG1 H N N 493 THR HG21 H N N 494 THR HG22 H N N 495 THR HG23 H N N 496 THR HXT H N N 497 TTP PA P N S 498 TTP O1A O N N 499 TTP O2A O N N 500 TTP O3A O N N 501 TTP PB P N S 502 TTP O1B O N N 503 TTP O2B O N N 504 TTP O3B O N N 505 TTP PG P N N 506 TTP O1G O N N 507 TTP O2G O N N 508 TTP O3G O N N 509 TTP "O5'" O N N 510 TTP "C5'" C N N 511 TTP "C4'" C N R 512 TTP "O4'" O N N 513 TTP "C3'" C N S 514 TTP "O3'" O N N 515 TTP "C2'" C N N 516 TTP "C1'" C N R 517 TTP N1 N N N 518 TTP C2 C N N 519 TTP O2 O N N 520 TTP N3 N N N 521 TTP C4 C N N 522 TTP O4 O N N 523 TTP C5 C N N 524 TTP C5M C N N 525 TTP C6 C N N 526 TTP HOA2 H N N 527 TTP HOB2 H N N 528 TTP HOG2 H N N 529 TTP HOG3 H N N 530 TTP "H5'1" H N N 531 TTP "H5'2" H N N 532 TTP "H4'" H N N 533 TTP "H3'" H N N 534 TTP "HO3'" H N N 535 TTP "H2'1" H N N 536 TTP "H2'2" H N N 537 TTP "H1'" H N N 538 TTP HN3 H N N 539 TTP HM51 H N N 540 TTP HM52 H N N 541 TTP HM53 H N N 542 TTP H6 H N N 543 TYR N N N N 544 TYR CA C N S 545 TYR C C N N 546 TYR O O N N 547 TYR CB C N N 548 TYR CG C Y N 549 TYR CD1 C Y N 550 TYR CD2 C Y N 551 TYR CE1 C Y N 552 TYR CE2 C Y N 553 TYR CZ C Y N 554 TYR OH O N N 555 TYR OXT O N N 556 TYR H H N N 557 TYR H2 H N N 558 TYR HA H N N 559 TYR HB2 H N N 560 TYR HB3 H N N 561 TYR HD1 H N N 562 TYR HD2 H N N 563 TYR HE1 H N N 564 TYR HE2 H N N 565 TYR HH H N N 566 TYR HXT H N N 567 VAL N N N N 568 VAL CA C N S 569 VAL C C N N 570 VAL O O N N 571 VAL CB C N N 572 VAL CG1 C N N 573 VAL CG2 C N N 574 VAL OXT O N N 575 VAL H H N N 576 VAL H2 H N N 577 VAL HA H N N 578 VAL HB H N N 579 VAL HG11 H N N 580 VAL HG12 H N N 581 VAL HG13 H N N 582 VAL HG21 H N N 583 VAL HG22 H N N 584 VAL HG23 H N N 585 VAL HXT H N N 586 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DOC N1 C2 sing N N 195 DOC N1 C6 sing N N 196 DOC N1 "C1'" sing N N 197 DOC C2 N3 sing N N 198 DOC C2 O2 doub N N 199 DOC N3 C4 doub N N 200 DOC C4 C5 sing N N 201 DOC C4 N4 sing N N 202 DOC C5 C6 doub N N 203 DOC C5 H5 sing N N 204 DOC C6 H6 sing N N 205 DOC N4 HN41 sing N N 206 DOC N4 HN42 sing N N 207 DOC "C1'" "C2'" sing N N 208 DOC "C1'" "O4'" sing N N 209 DOC "C1'" "H1'" sing N N 210 DOC "C2'" "C3'" sing N N 211 DOC "C2'" "H2'" sing N N 212 DOC "C2'" "H2''" sing N N 213 DOC "C3'" "C4'" sing N N 214 DOC "C3'" "H3'1" sing N N 215 DOC "C3'" "H3'2" sing N N 216 DOC "C4'" "O4'" sing N N 217 DOC "C4'" "C5'" sing N N 218 DOC "C4'" "H4'" sing N N 219 DOC "C5'" "O5'" sing N N 220 DOC "C5'" "H5'" sing N N 221 DOC "C5'" "H5''" sing N N 222 DOC "O5'" P sing N N 223 DOC P OP1 doub N N 224 DOC P OP2 sing N N 225 DOC P OP3 sing N N 226 DOC OP2 HOP2 sing N N 227 DOC OP3 HOP3 sing N N 228 DT OP3 P sing N N 229 DT OP3 HOP3 sing N N 230 DT P OP1 doub N N 231 DT P OP2 sing N N 232 DT P "O5'" sing N N 233 DT OP2 HOP2 sing N N 234 DT "O5'" "C5'" sing N N 235 DT "C5'" "C4'" sing N N 236 DT "C5'" "H5'" sing N N 237 DT "C5'" "H5''" sing N N 238 DT "C4'" "O4'" sing N N 239 DT "C4'" "C3'" sing N N 240 DT "C4'" "H4'" sing N N 241 DT "O4'" "C1'" sing N N 242 DT "C3'" "O3'" sing N N 243 DT "C3'" "C2'" sing N N 244 DT "C3'" "H3'" sing N N 245 DT "O3'" "HO3'" sing N N 246 DT "C2'" "C1'" sing N N 247 DT "C2'" "H2'" sing N N 248 DT "C2'" "H2''" sing N N 249 DT "C1'" N1 sing N N 250 DT "C1'" "H1'" sing N N 251 DT N1 C2 sing N N 252 DT N1 C6 sing N N 253 DT C2 O2 doub N N 254 DT C2 N3 sing N N 255 DT N3 C4 sing N N 256 DT N3 H3 sing N N 257 DT C4 O4 doub N N 258 DT C4 C5 sing N N 259 DT C5 C7 sing N N 260 DT C5 C6 doub N N 261 DT C7 H71 sing N N 262 DT C7 H72 sing N N 263 DT C7 H73 sing N N 264 DT C6 H6 sing N N 265 GLN N CA sing N N 266 GLN N H sing N N 267 GLN N H2 sing N N 268 GLN CA C sing N N 269 GLN CA CB sing N N 270 GLN CA HA sing N N 271 GLN C O doub N N 272 GLN C OXT sing N N 273 GLN CB CG sing N N 274 GLN CB HB2 sing N N 275 GLN CB HB3 sing N N 276 GLN CG CD sing N N 277 GLN CG HG2 sing N N 278 GLN CG HG3 sing N N 279 GLN CD OE1 doub N N 280 GLN CD NE2 sing N N 281 GLN NE2 HE21 sing N N 282 GLN NE2 HE22 sing N N 283 GLN OXT HXT sing N N 284 GLU N CA sing N N 285 GLU N H sing N N 286 GLU N H2 sing N N 287 GLU CA C sing N N 288 GLU CA CB sing N N 289 GLU CA HA sing N N 290 GLU C O doub N N 291 GLU C OXT sing N N 292 GLU CB CG sing N N 293 GLU CB HB2 sing N N 294 GLU CB HB3 sing N N 295 GLU CG CD sing N N 296 GLU CG HG2 sing N N 297 GLU CG HG3 sing N N 298 GLU CD OE1 doub N N 299 GLU CD OE2 sing N N 300 GLU OE2 HE2 sing N N 301 GLU OXT HXT sing N N 302 GLY N CA sing N N 303 GLY N H sing N N 304 GLY N H2 sing N N 305 GLY CA C sing N N 306 GLY CA HA2 sing N N 307 GLY CA HA3 sing N N 308 GLY C O doub N N 309 GLY C OXT sing N N 310 GLY OXT HXT sing N N 311 HIS N CA sing N N 312 HIS N H sing N N 313 HIS N H2 sing N N 314 HIS CA C sing N N 315 HIS CA CB sing N N 316 HIS CA HA sing N N 317 HIS C O doub N N 318 HIS C OXT sing N N 319 HIS CB CG sing N N 320 HIS CB HB2 sing N N 321 HIS CB HB3 sing N N 322 HIS CG ND1 sing Y N 323 HIS CG CD2 doub Y N 324 HIS ND1 CE1 doub Y N 325 HIS ND1 HD1 sing N N 326 HIS CD2 NE2 sing Y N 327 HIS CD2 HD2 sing N N 328 HIS CE1 NE2 sing Y N 329 HIS CE1 HE1 sing N N 330 HIS NE2 HE2 sing N N 331 HIS OXT HXT sing N N 332 HOH O H1 sing N N 333 HOH O H2 sing N N 334 ILE N CA sing N N 335 ILE N H sing N N 336 ILE N H2 sing N N 337 ILE CA C sing N N 338 ILE CA CB sing N N 339 ILE CA HA sing N N 340 ILE C O doub N N 341 ILE C OXT sing N N 342 ILE CB CG1 sing N N 343 ILE CB CG2 sing N N 344 ILE CB HB sing N N 345 ILE CG1 CD1 sing N N 346 ILE CG1 HG12 sing N N 347 ILE CG1 HG13 sing N N 348 ILE CG2 HG21 sing N N 349 ILE CG2 HG22 sing N N 350 ILE CG2 HG23 sing N N 351 ILE CD1 HD11 sing N N 352 ILE CD1 HD12 sing N N 353 ILE CD1 HD13 sing N N 354 ILE OXT HXT sing N N 355 LEU N CA sing N N 356 LEU N H sing N N 357 LEU N H2 sing N N 358 LEU CA C sing N N 359 LEU CA CB sing N N 360 LEU CA HA sing N N 361 LEU C O doub N N 362 LEU C OXT sing N N 363 LEU CB CG sing N N 364 LEU CB HB2 sing N N 365 LEU CB HB3 sing N N 366 LEU CG CD1 sing N N 367 LEU CG CD2 sing N N 368 LEU CG HG sing N N 369 LEU CD1 HD11 sing N N 370 LEU CD1 HD12 sing N N 371 LEU CD1 HD13 sing N N 372 LEU CD2 HD21 sing N N 373 LEU CD2 HD22 sing N N 374 LEU CD2 HD23 sing N N 375 LEU OXT HXT sing N N 376 LYS N CA sing N N 377 LYS N H sing N N 378 LYS N H2 sing N N 379 LYS CA C sing N N 380 LYS CA CB sing N N 381 LYS CA HA sing N N 382 LYS C O doub N N 383 LYS C OXT sing N N 384 LYS CB CG sing N N 385 LYS CB HB2 sing N N 386 LYS CB HB3 sing N N 387 LYS CG CD sing N N 388 LYS CG HG2 sing N N 389 LYS CG HG3 sing N N 390 LYS CD CE sing N N 391 LYS CD HD2 sing N N 392 LYS CD HD3 sing N N 393 LYS CE NZ sing N N 394 LYS CE HE2 sing N N 395 LYS CE HE3 sing N N 396 LYS NZ HZ1 sing N N 397 LYS NZ HZ2 sing N N 398 LYS NZ HZ3 sing N N 399 LYS OXT HXT sing N N 400 MET N CA sing N N 401 MET N H sing N N 402 MET N H2 sing N N 403 MET CA C sing N N 404 MET CA CB sing N N 405 MET CA HA sing N N 406 MET C O doub N N 407 MET C OXT sing N N 408 MET CB CG sing N N 409 MET CB HB2 sing N N 410 MET CB HB3 sing N N 411 MET CG SD sing N N 412 MET CG HG2 sing N N 413 MET CG HG3 sing N N 414 MET SD CE sing N N 415 MET CE HE1 sing N N 416 MET CE HE2 sing N N 417 MET CE HE3 sing N N 418 MET OXT HXT sing N N 419 PHE N CA sing N N 420 PHE N H sing N N 421 PHE N H2 sing N N 422 PHE CA C sing N N 423 PHE CA CB sing N N 424 PHE CA HA sing N N 425 PHE C O doub N N 426 PHE C OXT sing N N 427 PHE CB CG sing N N 428 PHE CB HB2 sing N N 429 PHE CB HB3 sing N N 430 PHE CG CD1 doub Y N 431 PHE CG CD2 sing Y N 432 PHE CD1 CE1 sing Y N 433 PHE CD1 HD1 sing N N 434 PHE CD2 CE2 doub Y N 435 PHE CD2 HD2 sing N N 436 PHE CE1 CZ doub Y N 437 PHE CE1 HE1 sing N N 438 PHE CE2 CZ sing Y N 439 PHE CE2 HE2 sing N N 440 PHE CZ HZ sing N N 441 PHE OXT HXT sing N N 442 PRO N CA sing N N 443 PRO N CD sing N N 444 PRO N H sing N N 445 PRO CA C sing N N 446 PRO CA CB sing N N 447 PRO CA HA sing N N 448 PRO C O doub N N 449 PRO C OXT sing N N 450 PRO CB CG sing N N 451 PRO CB HB2 sing N N 452 PRO CB HB3 sing N N 453 PRO CG CD sing N N 454 PRO CG HG2 sing N N 455 PRO CG HG3 sing N N 456 PRO CD HD2 sing N N 457 PRO CD HD3 sing N N 458 PRO OXT HXT sing N N 459 SER N CA sing N N 460 SER N H sing N N 461 SER N H2 sing N N 462 SER CA C sing N N 463 SER CA CB sing N N 464 SER CA HA sing N N 465 SER C O doub N N 466 SER C OXT sing N N 467 SER CB OG sing N N 468 SER CB HB2 sing N N 469 SER CB HB3 sing N N 470 SER OG HG sing N N 471 SER OXT HXT sing N N 472 THR N CA sing N N 473 THR N H sing N N 474 THR N H2 sing N N 475 THR CA C sing N N 476 THR CA CB sing N N 477 THR CA HA sing N N 478 THR C O doub N N 479 THR C OXT sing N N 480 THR CB OG1 sing N N 481 THR CB CG2 sing N N 482 THR CB HB sing N N 483 THR OG1 HG1 sing N N 484 THR CG2 HG21 sing N N 485 THR CG2 HG22 sing N N 486 THR CG2 HG23 sing N N 487 THR OXT HXT sing N N 488 TTP PA O1A doub N N 489 TTP PA O2A sing N N 490 TTP PA O3A sing N N 491 TTP PA "O5'" sing N N 492 TTP O2A HOA2 sing N N 493 TTP O3A PB sing N N 494 TTP PB O1B doub N N 495 TTP PB O2B sing N N 496 TTP PB O3B sing N N 497 TTP O2B HOB2 sing N N 498 TTP O3B PG sing N N 499 TTP PG O1G doub N N 500 TTP PG O2G sing N N 501 TTP PG O3G sing N N 502 TTP O2G HOG2 sing N N 503 TTP O3G HOG3 sing N N 504 TTP "O5'" "C5'" sing N N 505 TTP "C5'" "C4'" sing N N 506 TTP "C5'" "H5'1" sing N N 507 TTP "C5'" "H5'2" sing N N 508 TTP "C4'" "O4'" sing N N 509 TTP "C4'" "C3'" sing N N 510 TTP "C4'" "H4'" sing N N 511 TTP "O4'" "C1'" sing N N 512 TTP "C3'" "O3'" sing N N 513 TTP "C3'" "C2'" sing N N 514 TTP "C3'" "H3'" sing N N 515 TTP "O3'" "HO3'" sing N N 516 TTP "C2'" "C1'" sing N N 517 TTP "C2'" "H2'1" sing N N 518 TTP "C2'" "H2'2" sing N N 519 TTP "C1'" N1 sing N N 520 TTP "C1'" "H1'" sing N N 521 TTP N1 C2 sing N N 522 TTP N1 C6 sing N N 523 TTP C2 O2 doub N N 524 TTP C2 N3 sing N N 525 TTP N3 C4 sing N N 526 TTP N3 HN3 sing N N 527 TTP C4 O4 doub N N 528 TTP C4 C5 sing N N 529 TTP C5 C5M sing N N 530 TTP C5 C6 doub N N 531 TTP C5M HM51 sing N N 532 TTP C5M HM52 sing N N 533 TTP C5M HM53 sing N N 534 TTP C6 H6 sing N N 535 TYR N CA sing N N 536 TYR N H sing N N 537 TYR N H2 sing N N 538 TYR CA C sing N N 539 TYR CA CB sing N N 540 TYR CA HA sing N N 541 TYR C O doub N N 542 TYR C OXT sing N N 543 TYR CB CG sing N N 544 TYR CB HB2 sing N N 545 TYR CB HB3 sing N N 546 TYR CG CD1 doub Y N 547 TYR CG CD2 sing Y N 548 TYR CD1 CE1 sing Y N 549 TYR CD1 HD1 sing N N 550 TYR CD2 CE2 doub Y N 551 TYR CD2 HD2 sing N N 552 TYR CE1 CZ doub Y N 553 TYR CE1 HE1 sing N N 554 TYR CE2 CZ sing Y N 555 TYR CE2 HE2 sing N N 556 TYR CZ OH sing N N 557 TYR OH HH sing N N 558 TYR OXT HXT sing N N 559 VAL N CA sing N N 560 VAL N H sing N N 561 VAL N H2 sing N N 562 VAL CA C sing N N 563 VAL CA CB sing N N 564 VAL CA HA sing N N 565 VAL C O doub N N 566 VAL C OXT sing N N 567 VAL CB CG1 sing N N 568 VAL CB CG2 sing N N 569 VAL CB HB sing N N 570 VAL CG1 HG11 sing N N 571 VAL CG1 HG12 sing N N 572 VAL CG1 HG13 sing N N 573 VAL CG2 HG21 sing N N 574 VAL CG2 HG22 sing N N 575 VAL CG2 HG23 sing N N 576 VAL OXT HXT sing N N 577 # _ndb_struct_conf_na.entry_id 2FLL _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 1 1_555 B DT 11 1_555 0.088 -0.189 0.324 3.671 -8.429 -3.977 1 P_DA867:DT847_T P 867 ? T 847 ? 20 1 1 A DG 2 1_555 B DC 10 1_555 -0.202 -0.071 0.178 6.116 -6.052 0.191 2 P_DG868:DC846_T P 868 ? T 846 ? 19 1 1 A DG 3 1_555 B DC 9 1_555 -0.081 0.021 -0.009 -0.297 -3.493 -1.169 3 P_DG869:DC845_T P 869 ? T 845 ? 19 1 1 A DA 4 1_555 B DT 8 1_555 0.093 -0.138 -0.081 12.591 -6.551 -3.142 4 P_DA870:DT844_T P 870 ? T 844 ? 20 1 1 A DC 5 1_555 B DG 7 1_555 0.098 -0.185 -0.298 15.622 -12.400 -3.139 5 P_DC871:DG843_T P 871 ? T 843 ? 19 1 1 A DC 6 1_555 B DG 6 1_555 0.148 -0.223 -0.161 11.278 -13.856 -3.108 6 P_DC872:DG842_T P 872 ? T 842 ? 19 1 1 A DOC 7 1_555 B DG 5 1_555 0.252 -0.210 0.068 -1.470 -1.436 1.409 7 P_DOC873:DG841_T P 873 ? T 841 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 1 1_555 B DT 11 1_555 A DG 2 1_555 B DC 10 1_555 0.738 -0.311 3.378 1.707 -0.164 28.994 -0.583 -1.082 3.416 -0.326 -3.405 29.043 1 PP_DA867DG868:DC846DT847_TT P 867 ? T 847 ? P 868 ? T 846 ? 1 A DG 2 1_555 B DC 10 1_555 A DG 3 1_555 B DC 9 1_555 0.056 -0.758 3.459 0.311 2.738 37.049 -1.573 -0.044 3.396 4.302 -0.488 37.148 2 PP_DG868DG869:DC845DC846_TT P 868 ? T 846 ? P 869 ? T 845 ? 1 A DG 3 1_555 B DC 9 1_555 A DA 4 1_555 B DT 8 1_555 -0.054 -0.570 2.994 -0.533 3.240 31.109 -1.613 0.008 2.921 6.021 0.991 31.277 3 PP_DG869DA870:DT844DC845_TT P 869 ? T 845 ? P 870 ? T 844 ? 1 A DA 4 1_555 B DT 8 1_555 A DC 5 1_555 B DG 7 1_555 0.598 -1.033 3.291 -0.724 1.672 32.505 -2.133 -1.193 3.222 2.984 1.292 32.554 4 PP_DA870DC871:DG843DT844_TT P 870 ? T 844 ? P 871 ? T 843 ? 1 A DC 5 1_555 B DG 7 1_555 A DC 6 1_555 B DG 6 1_555 -0.428 -1.635 3.492 -1.449 11.051 30.090 -4.926 0.518 2.752 20.426 2.678 32.044 5 PP_DC871DC872:DG842DG843_TT P 871 ? T 843 ? P 872 ? T 842 ? 1 A DC 6 1_555 B DG 6 1_555 A DOC 7 1_555 B DG 5 1_555 -0.493 -1.445 3.681 -1.420 5.235 25.909 -4.665 0.668 3.350 11.516 3.123 26.461 6 PP_DC872DOC873:DG841DG842_TT P 872 ? T 842 ? P 873 ? T 841 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MAGNESIUM ION' MG 5 "THYMIDINE-5'-TRIPHOSPHATE" TTP 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2AZL _pdbx_initial_refinement_model.details 'PDB code 2AZL' #