HEADER HYDROLASE 17-JAN-06 2FQ1 TITLE CRYSTAL STRUCTURE OF THE TWO-DOMAIN NON-RIBOSOMAL PEPTIDE SYNTHETASE TITLE 2 ENTB CONTAINING ISOCHORISMATE LYASE AND ARYL-CARRIER PROTEIN DOMAINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOCHORISMATASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ISOCHORISMATE LYASE, 2,3 DIHYDRO-2,3 DIHYDROXYBENZOATE COMPND 5 SYNTHASE, ENTEROBACTIN SYNTHETASE COMPONENT B, ENTEROCHELIN SYNTHASE COMPND 6 B; COMPND 7 EC: 3.3.2.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 STRAIN: JM109; SOURCE 5 GENE: ENTB, ENTG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET15BTEV; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRF7 KEYWDS ENTB, NRPS, MULTI-DOMAIN, ACP, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR E.J.DRAKE,D.A.NICOLAI,A.M.GULICK REVDAT 4 30-AUG-23 2FQ1 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 2FQ1 1 VERSN REVDAT 2 24-FEB-09 2FQ1 1 VERSN REVDAT 1 02-MAY-06 2FQ1 0 JRNL AUTH E.J.DRAKE,D.A.NICOLAI,A.M.GULICK JRNL TITL STRUCTURE OF THE ENTB MULTIDOMAIN NONRIBOSOMAL PEPTIDE JRNL TITL 2 SYNTHETASE AND FUNCTIONAL ANALYSIS OF ITS INTERACTION WITH JRNL TITL 3 THE ENTE ADENYLATION DOMAIN. JRNL REF CHEM.BIOL. V. 13 409 2006 JRNL REFN ISSN 1074-5521 JRNL PMID 16632253 JRNL DOI 10.1016/J.CHEMBIOL.2006.02.005 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 29972 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1545 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1516 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 70.24 REMARK 3 BIN R VALUE (WORKING SET) : 0.2570 REMARK 3 BIN FREE R VALUE SET COUNT : 84 REMARK 3 BIN FREE R VALUE : 0.3220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4418 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 229 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 47.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.10000 REMARK 3 B22 (A**2) : 0.15000 REMARK 3 B33 (A**2) : -3.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.233 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.176 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.037 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4532 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6170 ; 1.245 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 556 ; 5.562 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 216 ;34.024 ;23.981 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 737 ;15.434 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 33 ;18.551 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 676 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3495 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1956 ; 0.189 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3051 ; 0.300 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 258 ; 0.151 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 49 ; 0.143 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.227 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2886 ; 3.280 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4512 ; 4.440 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1902 ; 3.995 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1658 ; 5.162 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 210 REMARK 3 ORIGIN FOR THE GROUP (A): -22.7440 -4.8860 35.8166 REMARK 3 T TENSOR REMARK 3 T11: -0.1391 T22: -0.0860 REMARK 3 T33: -0.1192 T12: -0.0274 REMARK 3 T13: -0.0208 T23: 0.0369 REMARK 3 L TENSOR REMARK 3 L11: 1.0435 L22: 2.7054 REMARK 3 L33: 4.0241 L12: -0.2955 REMARK 3 L13: 0.5691 L23: -1.5690 REMARK 3 S TENSOR REMARK 3 S11: -0.0485 S12: -0.0885 S13: 0.0147 REMARK 3 S21: 0.4689 S22: -0.0906 S23: -0.1306 REMARK 3 S31: -0.2744 S32: 0.0698 S33: 0.1391 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 211 A 283 REMARK 3 ORIGIN FOR THE GROUP (A): -40.0403 7.2507 64.3198 REMARK 3 T TENSOR REMARK 3 T11: 0.3544 T22: -0.1381 REMARK 3 T33: -0.1948 T12: -0.0078 REMARK 3 T13: 0.1586 T23: 0.0140 REMARK 3 L TENSOR REMARK 3 L11: 2.9112 L22: 4.1181 REMARK 3 L33: 9.2939 L12: 0.0097 REMARK 3 L13: -2.3287 L23: -0.7732 REMARK 3 S TENSOR REMARK 3 S11: 0.2600 S12: 0.0067 S13: 0.1664 REMARK 3 S21: -0.9918 S22: -0.1637 S23: -0.2795 REMARK 3 S31: -0.2735 S32: 0.3646 S33: -0.0963 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 210 REMARK 3 ORIGIN FOR THE GROUP (A): -29.9145 -2.5514 9.1623 REMARK 3 T TENSOR REMARK 3 T11: -0.1452 T22: -0.1016 REMARK 3 T33: -0.1076 T12: -0.0324 REMARK 3 T13: -0.0113 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 1.0167 L22: 1.9312 REMARK 3 L33: 4.4005 L12: -0.1127 REMARK 3 L13: 0.5577 L23: -0.8596 REMARK 3 S TENSOR REMARK 3 S11: -0.0311 S12: -0.0126 S13: -0.0503 REMARK 3 S21: -0.3377 S22: 0.0322 S23: 0.0831 REMARK 3 S31: -0.0162 S32: -0.1843 S33: -0.0011 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 211 B 282 REMARK 3 ORIGIN FOR THE GROUP (A): -10.3007 13.8066 -20.9420 REMARK 3 T TENSOR REMARK 3 T11: 0.4524 T22: -0.1933 REMARK 3 T33: -0.1760 T12: -0.2121 REMARK 3 T13: 0.2450 T23: -0.0524 REMARK 3 L TENSOR REMARK 3 L11: 4.6900 L22: 8.6327 REMARK 3 L33: 5.9686 L12: 3.1169 REMARK 3 L13: 0.3106 L23: 4.1510 REMARK 3 S TENSOR REMARK 3 S11: 0.5570 S12: -0.2536 S13: -0.1073 REMARK 3 S21: 1.9196 S22: -0.7125 S23: 0.6670 REMARK 3 S31: 1.1928 S32: -0.4091 S33: 0.1555 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2FQ1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JAN-06. REMARK 100 THE DEPOSITION ID IS D_1000036172. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAY-04 REMARK 200 TEMPERATURE (KELVIN) : 113 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : OSMIC MAX-FLUX CONFOCAL MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30038 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.34100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1NF9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10-15% MEPEG5000, 0.8M MGCL2, 10% REMARK 280 ETHYLENE GLYCOL, 50MM HEPPS, PH 8.0, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.44450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.36500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.16550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.36500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.44450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.16550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -84.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ILE A 3 REMARK 465 PRO A 4 REMARK 465 VAL A 284 REMARK 465 LYS A 285 REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ILE B 3 REMARK 465 GLU B 283 REMARK 465 VAL B 284 REMARK 465 LYS B 285 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 5 CG CD CE NZ REMARK 470 GLN A 7 CG CD OE1 NE2 REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 LYS A 107 CG CD CE NZ REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 LYS A 257 CG CD CE NZ REMARK 470 GLU A 283 CG CD OE1 OE2 REMARK 470 LYS B 5 CG CD CE NZ REMARK 470 GLN B 7 CG CD OE1 NE2 REMARK 470 GLU B 48 CG CD OE1 OE2 REMARK 470 LYS B 139 CG CD CE NZ REMARK 470 SER B 214 OG REMARK 470 GLU B 220 CG CD OE1 OE2 REMARK 470 ASP B 227 CG OD1 OD2 REMARK 470 ARG B 254 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 278 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1070 O HOH B 1072 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO B 212 C PRO B 212 O 0.191 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 89 -126.53 51.39 REMARK 500 ILE A 155 -99.27 -97.36 REMARK 500 SER A 197 -13.41 -151.43 REMARK 500 ASN A 270 76.66 -154.57 REMARK 500 MET B 38 59.09 -90.16 REMARK 500 ALA B 89 -122.95 53.37 REMARK 500 ILE B 155 -94.68 -101.92 REMARK 500 SER B 197 -18.67 -147.28 REMARK 500 PRO B 212 110.24 -38.23 REMARK 500 ASN B 270 78.89 -151.52 REMARK 500 SER B 281 68.83 -109.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 998 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 69 O REMARK 620 2 HOH A1057 O 92.4 REMARK 620 3 HOH A1058 O 66.1 63.5 REMARK 620 4 HOH A1111 O 156.7 76.4 90.6 REMARK 620 5 GLU B 228 OE1 100.6 132.4 161.4 102.0 REMARK 620 6 ASP B 240 O 89.2 138.5 79.5 86.1 87.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 992 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 185 OE2 REMARK 620 2 HOH B1055 O 128.3 REMARK 620 3 HOH B1056 O 110.2 118.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 997 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 227 OD2 REMARK 620 2 GLY A 242 O 76.8 REMARK 620 3 ASP A 244 OD1 173.9 102.8 REMARK 620 4 HOH A1056 O 61.2 90.2 112.8 REMARK 620 5 HOH A1067 O 105.2 178.0 75.3 91.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 991 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 240 O REMARK 620 2 HOH A1095 O 86.9 REMARK 620 3 GLN B 69 O 92.5 171.7 REMARK 620 4 HOH B1043 O 168.7 103.4 76.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 994 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 110 OD1 REMARK 620 2 HOH B1047 O 81.7 REMARK 620 3 HOH B1052 O 89.0 68.5 REMARK 620 4 HOH B1100 O 79.8 160.3 117.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 995 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B1008 O REMARK 620 2 HOH B1103 O 78.0 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 991 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 992 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 993 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 994 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 995 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 996 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 997 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 998 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 950 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 951 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 800 DBREF 2FQ1 A 1 285 UNP P0ADI4 ENTB_ECOLI 1 285 DBREF 2FQ1 B 1 285 UNP P0ADI4 ENTB_ECOLI 1 285 SEQADV 2FQ1 GLY A -1 UNP P0ADI4 CLONING ARTIFACT SEQADV 2FQ1 HIS A 0 UNP P0ADI4 CLONING ARTIFACT SEQADV 2FQ1 GLY B -1 UNP P0ADI4 CLONING ARTIFACT SEQADV 2FQ1 HIS B 0 UNP P0ADI4 CLONING ARTIFACT SEQRES 1 A 287 GLY HIS MET ALA ILE PRO LYS LEU GLN ALA TYR ALA LEU SEQRES 2 A 287 PRO GLU SER HIS ASP ILE PRO GLN ASN LYS VAL ASP TRP SEQRES 3 A 287 ALA PHE GLU PRO GLN ARG ALA ALA LEU LEU ILE HIS ASP SEQRES 4 A 287 MET GLN ASP TYR PHE VAL SER PHE TRP GLY GLU ASN CYS SEQRES 5 A 287 PRO MET MET GLU GLN VAL ILE ALA ASN ILE ALA ALA LEU SEQRES 6 A 287 ARG ASP TYR CYS LYS GLN HIS ASN ILE PRO VAL TYR TYR SEQRES 7 A 287 THR ALA GLN PRO LYS GLU GLN SER ASP GLU ASP ARG ALA SEQRES 8 A 287 LEU LEU ASN ASP MET TRP GLY PRO GLY LEU THR ARG SER SEQRES 9 A 287 PRO GLU GLN GLN LYS VAL VAL ASP ARG LEU THR PRO ASP SEQRES 10 A 287 ALA ASP ASP THR VAL LEU VAL LYS TRP ARG TYR SER ALA SEQRES 11 A 287 PHE HIS ARG SER PRO LEU GLU GLN MET LEU LYS GLU SER SEQRES 12 A 287 GLY ARG ASN GLN LEU ILE ILE THR GLY VAL TYR ALA HIS SEQRES 13 A 287 ILE GLY CYS MET THR THR ALA THR ASP ALA PHE MET ARG SEQRES 14 A 287 ASP ILE LYS PRO PHE MET VAL ALA ASP ALA LEU ALA ASP SEQRES 15 A 287 PHE SER ARG ASP GLU HIS LEU MET SER LEU LYS TYR VAL SEQRES 16 A 287 ALA GLY ARG SER GLY ARG VAL VAL MET THR GLU GLU LEU SEQRES 17 A 287 LEU PRO ALA PRO ILE PRO ALA SER LYS ALA ALA LEU ARG SEQRES 18 A 287 GLU VAL ILE LEU PRO LEU LEU ASP GLU SER ASP GLU PRO SEQRES 19 A 287 PHE ASP ASP ASP ASN LEU ILE ASP TYR GLY LEU ASP SER SEQRES 20 A 287 VAL ARG MET MET ALA LEU ALA ALA ARG TRP ARG LYS VAL SEQRES 21 A 287 HIS GLY ASP ILE ASP PHE VAL MET LEU ALA LYS ASN PRO SEQRES 22 A 287 THR ILE ASP ALA TRP TRP LYS LEU LEU SER ARG GLU VAL SEQRES 23 A 287 LYS SEQRES 1 B 287 GLY HIS MET ALA ILE PRO LYS LEU GLN ALA TYR ALA LEU SEQRES 2 B 287 PRO GLU SER HIS ASP ILE PRO GLN ASN LYS VAL ASP TRP SEQRES 3 B 287 ALA PHE GLU PRO GLN ARG ALA ALA LEU LEU ILE HIS ASP SEQRES 4 B 287 MET GLN ASP TYR PHE VAL SER PHE TRP GLY GLU ASN CYS SEQRES 5 B 287 PRO MET MET GLU GLN VAL ILE ALA ASN ILE ALA ALA LEU SEQRES 6 B 287 ARG ASP TYR CYS LYS GLN HIS ASN ILE PRO VAL TYR TYR SEQRES 7 B 287 THR ALA GLN PRO LYS GLU GLN SER ASP GLU ASP ARG ALA SEQRES 8 B 287 LEU LEU ASN ASP MET TRP GLY PRO GLY LEU THR ARG SER SEQRES 9 B 287 PRO GLU GLN GLN LYS VAL VAL ASP ARG LEU THR PRO ASP SEQRES 10 B 287 ALA ASP ASP THR VAL LEU VAL LYS TRP ARG TYR SER ALA SEQRES 11 B 287 PHE HIS ARG SER PRO LEU GLU GLN MET LEU LYS GLU SER SEQRES 12 B 287 GLY ARG ASN GLN LEU ILE ILE THR GLY VAL TYR ALA HIS SEQRES 13 B 287 ILE GLY CYS MET THR THR ALA THR ASP ALA PHE MET ARG SEQRES 14 B 287 ASP ILE LYS PRO PHE MET VAL ALA ASP ALA LEU ALA ASP SEQRES 15 B 287 PHE SER ARG ASP GLU HIS LEU MET SER LEU LYS TYR VAL SEQRES 16 B 287 ALA GLY ARG SER GLY ARG VAL VAL MET THR GLU GLU LEU SEQRES 17 B 287 LEU PRO ALA PRO ILE PRO ALA SER LYS ALA ALA LEU ARG SEQRES 18 B 287 GLU VAL ILE LEU PRO LEU LEU ASP GLU SER ASP GLU PRO SEQRES 19 B 287 PHE ASP ASP ASP ASN LEU ILE ASP TYR GLY LEU ASP SER SEQRES 20 B 287 VAL ARG MET MET ALA LEU ALA ALA ARG TRP ARG LYS VAL SEQRES 21 B 287 HIS GLY ASP ILE ASP PHE VAL MET LEU ALA LYS ASN PRO SEQRES 22 B 287 THR ILE ASP ALA TRP TRP LYS LEU LEU SER ARG GLU VAL SEQRES 23 B 287 LYS HET MG A 992 1 HET MG A 993 1 HET MG A 996 1 HET MG A 997 1 HET MG A 998 1 HET CL A 951 1 HET EDO A 800 4 HET MG B 991 1 HET MG B 994 1 HET MG B 995 1 HET CL B 950 1 HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 MG 8(MG 2+) FORMUL 8 CL 2(CL 1-) FORMUL 9 EDO C2 H6 O2 FORMUL 14 HOH *229(H2 O) HELIX 1 1 GLU A 13 ILE A 17 5 5 HELIX 2 2 GLU A 27 GLN A 29 5 3 HELIX 3 3 GLN A 39 SER A 44 1 6 HELIX 4 4 CYS A 50 HIS A 70 1 21 HELIX 5 5 SER A 84 ALA A 89 1 6 HELIX 6 6 LEU A 90 GLY A 96 1 7 HELIX 7 7 PRO A 97 GLN A 106 5 10 HELIX 8 8 VAL A 109 THR A 113 5 5 HELIX 9 9 PRO A 133 SER A 141 1 9 HELIX 10 10 ILE A 155 ARG A 167 1 13 HELIX 11 11 SER A 182 SER A 197 1 16 HELIX 12 12 MET A 202 LEU A 207 1 6 HELIX 13 13 SER A 214 LEU A 223 1 10 HELIX 14 14 PRO A 224 LEU A 226 5 3 HELIX 15 15 LEU A 238 GLY A 242 5 5 HELIX 16 16 VAL A 246 ARG A 256 1 11 HELIX 17 17 ASP A 263 LYS A 269 1 7 HELIX 18 18 THR A 272 ARG A 282 1 11 HELIX 19 19 GLU B 13 ILE B 17 5 5 HELIX 20 20 GLU B 27 GLN B 29 5 3 HELIX 21 21 GLN B 39 SER B 44 1 6 HELIX 22 22 CYS B 50 HIS B 70 1 21 HELIX 23 23 SER B 84 ALA B 89 1 6 HELIX 24 24 ALA B 89 GLY B 96 1 8 HELIX 25 25 PRO B 97 GLN B 106 5 10 HELIX 26 26 VAL B 109 THR B 113 5 5 HELIX 27 27 PRO B 133 SER B 141 1 9 HELIX 28 28 ILE B 155 ARG B 167 1 13 HELIX 29 29 SER B 182 SER B 197 1 16 HELIX 30 30 MET B 202 LEU B 207 1 6 HELIX 31 31 SER B 214 LEU B 223 1 10 HELIX 32 32 PRO B 224 LEU B 226 5 3 HELIX 33 33 VAL B 246 ARG B 256 1 11 HELIX 34 34 ASP B 263 LYS B 269 1 7 HELIX 35 35 THR B 272 SER B 281 1 10 SHEET 1 A 6 THR A 119 VAL A 122 0 SHEET 2 A 6 VAL A 74 ALA A 78 1 N TYR A 76 O THR A 119 SHEET 3 A 6 ALA A 31 HIS A 36 1 N LEU A 33 O TYR A 75 SHEET 4 A 6 GLN A 145 VAL A 151 1 O ILE A 147 N LEU A 34 SHEET 5 A 6 LYS A 170 ALA A 179 1 O PHE A 172 N ILE A 148 SHEET 6 A 6 ARG A 199 VAL A 201 1 O VAL A 201 N MET A 173 SHEET 1 B 6 THR B 119 VAL B 122 0 SHEET 2 B 6 VAL B 74 ALA B 78 1 N TYR B 76 O LEU B 121 SHEET 3 B 6 ALA B 31 HIS B 36 1 N LEU B 33 O TYR B 75 SHEET 4 B 6 GLN B 145 GLY B 150 1 O ILE B 147 N ALA B 32 SHEET 5 B 6 LYS B 170 LEU B 178 1 O LYS B 170 N LEU B 146 SHEET 6 B 6 ARG B 199 VAL B 201 1 O ARG B 199 N MET B 173 LINK O GLN A 69 MG MG A 998 1555 1555 2.45 LINK OD1 ASP A 110 MG MG A 993 1555 1555 2.33 LINK OE2 GLU A 185 MG MG A 992 1555 1555 2.82 LINK OD2 ASP A 227 MG MG A 997 1555 1555 3.00 LINK O ASP A 240 MG MG B 991 2354 1555 2.55 LINK O GLY A 242 MG MG A 997 1555 1555 2.71 LINK OD1 ASP A 244 MG MG A 997 1555 1555 2.49 LINK MG MG A 992 O HOH B1055 1555 1555 2.26 LINK MG MG A 992 O HOH B1056 1555 1555 2.74 LINK MG MG A 996 O HOH A1016 1555 1555 2.86 LINK MG MG A 997 O HOH A1056 1555 1555 2.53 LINK MG MG A 997 O HOH A1067 1555 1555 3.09 LINK MG MG A 998 O HOH A1057 1555 1555 2.03 LINK MG MG A 998 O HOH A1058 1555 1555 2.99 LINK MG MG A 998 O HOH A1111 1555 1555 2.49 LINK MG MG A 998 OE1 GLU B 228 1555 2455 2.94 LINK MG MG A 998 O ASP B 240 1555 2455 2.78 LINK O HOH A1095 MG MG B 991 2354 1555 2.75 LINK O GLN B 69 MG MG B 991 1555 1555 2.49 LINK OD1 ASP B 110 MG MG B 994 1555 1555 2.27 LINK MG MG B 991 O HOH B1043 1555 1555 2.26 LINK MG MG B 994 O HOH B1047 1555 1555 2.65 LINK MG MG B 994 O HOH B1052 1555 1555 2.07 LINK MG MG B 994 O HOH B1100 1555 1555 2.34 LINK MG MG B 995 O HOH B1008 1555 1555 2.20 LINK MG MG B 995 O HOH B1103 1555 1555 2.49 CISPEP 1 VAL A 151 TYR A 152 0 -4.40 CISPEP 2 PRO B 4 LYS B 5 0 0.90 CISPEP 3 VAL B 151 TYR B 152 0 -8.36 SITE 1 AC1 4 ASP A 240 HOH A1095 GLN B 69 HOH B1043 SITE 1 AC2 3 GLU A 185 HOH B1055 HOH B1056 SITE 1 AC3 1 ASP A 110 SITE 1 AC4 4 ASP B 110 HOH B1047 HOH B1052 HOH B1100 SITE 1 AC5 3 HIS B 15 HOH B1008 HOH B1103 SITE 1 AC6 1 HOH A1016 SITE 1 AC7 5 ASP A 227 GLY A 242 ASP A 244 HOH A1056 SITE 2 AC7 5 HOH A1067 SITE 1 AC8 6 GLN A 69 HOH A1057 HOH A1058 HOH A1111 SITE 2 AC8 6 GLU B 228 ASP B 240 SITE 1 AC9 3 TYR B 152 ILE B 155 GLY B 156 SITE 1 BC1 3 TYR A 152 ILE A 155 GLY A 156 SITE 1 BC2 5 THR A 159 TYR A 192 THR B 159 THR B 162 SITE 2 BC2 5 TYR B 192 CRYST1 50.889 82.331 164.730 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019700 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012100 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006100 0.00000