data_2FQ4 # _entry.id 2FQ4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.357 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2FQ4 pdb_00002fq4 10.2210/pdb2fq4/pdb RCSB RCSB036175 ? ? WWPDB D_1000036175 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC24909 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2FQ4 _pdbx_database_status.recvd_initial_deposition_date 2006-01-17 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhang, R.' 1 ? 'Wu, R.' 2 ? 'Moy, S.' 3 ? 'Cymborowski, M.' 4 ? 'Minor, W.' 5 0000-0001-7075-7090 'Joachimiak, A.' 6 ? 'Midwest Center for Structural Genomics (MCSG)' 7 ? # _citation.id primary _citation.title 'The crystal structure of the transcriptional regulator (TetR family) from Bacillus cereus' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, R.' 1 ? primary 'Wu, R.' 2 ? primary 'Moy, S.' 3 ? primary 'Cymborowski, M.' 4 ? primary 'Minor, W.' 5 0000-0001-7075-7090 primary 'Otwinowski, Z.' 6 ? primary 'Joachimiak, A.' 7 ? # _cell.entry_id 2FQ4 _cell.length_a 52.891 _cell.length_b 67.648 _cell.length_c 111.250 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2FQ4 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcriptional regulator, TetR family' 21775.795 1 ? ? ? ? 2 water nat water 18.015 102 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)QSKRGRPRNIETQKAILSASYELLLESGFKAVTVDKIAERAKVSKATIYKWWPNKAAVV(MSE)DGFLSAAAARL PVPDTGSALNDILIHATSLANFLISREGTIINELVGEGQFDSKLAEEYRVRYFQPRRLQAKQLLEKGIKRGELKENLDIE LSIDLIYGPIFYRLLVTGEKLDDSYVHDLVINAFEGIRLR ; _entity_poly.pdbx_seq_one_letter_code_can ;MQSKRGRPRNIETQKAILSASYELLLESGFKAVTVDKIAERAKVSKATIYKWWPNKAAVVMDGFLSAAAARLPVPDTGSA LNDILIHATSLANFLISREGTIINELVGEGQFDSKLAEEYRVRYFQPRRLQAKQLLEKGIKRGELKENLDIELSIDLIYG PIFYRLLVTGEKLDDSYVHDLVINAFEGIRLR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC24909 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLN n 1 3 SER n 1 4 LYS n 1 5 ARG n 1 6 GLY n 1 7 ARG n 1 8 PRO n 1 9 ARG n 1 10 ASN n 1 11 ILE n 1 12 GLU n 1 13 THR n 1 14 GLN n 1 15 LYS n 1 16 ALA n 1 17 ILE n 1 18 LEU n 1 19 SER n 1 20 ALA n 1 21 SER n 1 22 TYR n 1 23 GLU n 1 24 LEU n 1 25 LEU n 1 26 LEU n 1 27 GLU n 1 28 SER n 1 29 GLY n 1 30 PHE n 1 31 LYS n 1 32 ALA n 1 33 VAL n 1 34 THR n 1 35 VAL n 1 36 ASP n 1 37 LYS n 1 38 ILE n 1 39 ALA n 1 40 GLU n 1 41 ARG n 1 42 ALA n 1 43 LYS n 1 44 VAL n 1 45 SER n 1 46 LYS n 1 47 ALA n 1 48 THR n 1 49 ILE n 1 50 TYR n 1 51 LYS n 1 52 TRP n 1 53 TRP n 1 54 PRO n 1 55 ASN n 1 56 LYS n 1 57 ALA n 1 58 ALA n 1 59 VAL n 1 60 VAL n 1 61 MSE n 1 62 ASP n 1 63 GLY n 1 64 PHE n 1 65 LEU n 1 66 SER n 1 67 ALA n 1 68 ALA n 1 69 ALA n 1 70 ALA n 1 71 ARG n 1 72 LEU n 1 73 PRO n 1 74 VAL n 1 75 PRO n 1 76 ASP n 1 77 THR n 1 78 GLY n 1 79 SER n 1 80 ALA n 1 81 LEU n 1 82 ASN n 1 83 ASP n 1 84 ILE n 1 85 LEU n 1 86 ILE n 1 87 HIS n 1 88 ALA n 1 89 THR n 1 90 SER n 1 91 LEU n 1 92 ALA n 1 93 ASN n 1 94 PHE n 1 95 LEU n 1 96 ILE n 1 97 SER n 1 98 ARG n 1 99 GLU n 1 100 GLY n 1 101 THR n 1 102 ILE n 1 103 ILE n 1 104 ASN n 1 105 GLU n 1 106 LEU n 1 107 VAL n 1 108 GLY n 1 109 GLU n 1 110 GLY n 1 111 GLN n 1 112 PHE n 1 113 ASP n 1 114 SER n 1 115 LYS n 1 116 LEU n 1 117 ALA n 1 118 GLU n 1 119 GLU n 1 120 TYR n 1 121 ARG n 1 122 VAL n 1 123 ARG n 1 124 TYR n 1 125 PHE n 1 126 GLN n 1 127 PRO n 1 128 ARG n 1 129 ARG n 1 130 LEU n 1 131 GLN n 1 132 ALA n 1 133 LYS n 1 134 GLN n 1 135 LEU n 1 136 LEU n 1 137 GLU n 1 138 LYS n 1 139 GLY n 1 140 ILE n 1 141 LYS n 1 142 ARG n 1 143 GLY n 1 144 GLU n 1 145 LEU n 1 146 LYS n 1 147 GLU n 1 148 ASN n 1 149 LEU n 1 150 ASP n 1 151 ILE n 1 152 GLU n 1 153 LEU n 1 154 SER n 1 155 ILE n 1 156 ASP n 1 157 LEU n 1 158 ILE n 1 159 TYR n 1 160 GLY n 1 161 PRO n 1 162 ILE n 1 163 PHE n 1 164 TYR n 1 165 ARG n 1 166 LEU n 1 167 LEU n 1 168 VAL n 1 169 THR n 1 170 GLY n 1 171 GLU n 1 172 LYS n 1 173 LEU n 1 174 ASP n 1 175 ASP n 1 176 SER n 1 177 TYR n 1 178 VAL n 1 179 HIS n 1 180 ASP n 1 181 LEU n 1 182 VAL n 1 183 ILE n 1 184 ASN n 1 185 ALA n 1 186 PHE n 1 187 GLU n 1 188 GLY n 1 189 ILE n 1 190 ARG n 1 191 LEU n 1 192 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bacillus _entity_src_gen.pdbx_gene_src_gene GI:29896827 _entity_src_gen.gene_src_species 'Bacillus cereus' _entity_src_gen.gene_src_strain 'ATCC 14579' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus cereus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 226900 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PDM68 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code AAP10105 _struct_ref.pdbx_db_accession 29896827 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MQSKRGRPRNIETQKAILSASYELLLESGFKAVTVDKIAERAKVSKATIYKWWPNKAAVVMDGFLSAAAARLPVPDTGSA LNDILIHATSLANFLISREGTIINELVGEGQFDSKLAEEYRVRYFQPRRLQAKQLLEKGIKRGELKENLDIELSIDLIYG PIFYRLLVTGEKLDDSYVHDLVINAFEGIRLR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2FQ4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 192 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 29896827 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 192 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 192 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2FQ4 MSE A 1 ? GB 29896827 MET 1 'modified residue' 1 1 1 2FQ4 MSE A 61 ? GB 29896827 MET 61 'modified residue' 61 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2FQ4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.28 _exptl_crystal.density_percent_sol 46.15 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '25% PEG3350, 0.2M NaCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2004-04-04 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 channel' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9798 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9798 # _reflns.entry_id 2FQ4 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 55.64 _reflns.d_resolution_high 1.79 _reflns.number_obs 17099 _reflns.number_all 18056 _reflns.percent_possible_obs 94.70 _reflns.pdbx_Rmerge_I_obs 0.059 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 40.5 _reflns.B_iso_Wilson_estimate 29 _reflns.pdbx_redundancy 12.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.795 _reflns_shell.d_res_low 1.841 _reflns_shell.percent_possible_all 80.0 _reflns_shell.Rmerge_I_obs 0.68 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.45 _reflns_shell.pdbx_redundancy 7.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1280 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2FQ4 _refine.ls_number_reflns_obs 17099 _refine.ls_number_reflns_all 18056 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 55.64 _refine.ls_d_res_high 1.79 _refine.ls_percent_reflns_obs 94.70 _refine.ls_R_factor_obs 0.23683 _refine.ls_R_factor_all 0.2368 _refine.ls_R_factor_R_work 0.2355 _refine.ls_R_factor_R_free 0.26208 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 925 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.942 _refine.correlation_coeff_Fo_to_Fc_free 0.926 _refine.B_iso_mean 28.292 _refine.aniso_B[1][1] -0.31 _refine.aniso_B[2][2] 0.17 _refine.aniso_B[3][3] 0.14 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.167 _refine.pdbx_overall_ESU_R_Free 0.148 _refine.overall_SU_ML 0.134 _refine.overall_SU_B 8.782 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2FQ4 _refine_analyze.Luzzati_coordinate_error_obs 0.035 _refine_analyze.Luzzati_sigma_a_obs 0.034 _refine_analyze.Luzzati_d_res_low_obs 6.0 _refine_analyze.Luzzati_coordinate_error_free 0.040 _refine_analyze.Luzzati_sigma_a_free 0.5 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1464 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 102 _refine_hist.number_atoms_total 1566 _refine_hist.d_res_high 1.79 _refine_hist.d_res_low 55.64 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.022 ? 1488 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1419 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.311 1.981 ? 2010 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.847 3.000 ? 3287 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.010 5.000 ? 183 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.015 23.731 ? 67 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.010 15.000 ? 275 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.849 15.000 ? 12 'X-RAY DIFFRACTION' ? r_chiral_restr 0.079 0.200 ? 231 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1635 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 303 'X-RAY DIFFRACTION' ? r_nbd_refined 0.209 0.200 ? 380 'X-RAY DIFFRACTION' ? r_nbd_other 0.184 0.200 ? 1397 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.177 0.200 ? 743 'X-RAY DIFFRACTION' ? r_nbtor_other 0.084 0.200 ? 848 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.192 0.200 ? 90 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other 0.008 0.200 ? 1 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.190 0.200 ? 16 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.239 0.200 ? 79 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.158 0.200 ? 12 'X-RAY DIFFRACTION' ? r_mcbond_it 0.935 1.500 ? 1157 'X-RAY DIFFRACTION' ? r_mcbond_other 0.193 1.500 ? 376 'X-RAY DIFFRACTION' ? r_mcangle_it 1.236 2.000 ? 1469 'X-RAY DIFFRACTION' ? r_scbond_it 2.327 3.000 ? 647 'X-RAY DIFFRACTION' ? r_scangle_it 3.075 4.500 ? 541 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.795 _refine_ls_shell.d_res_low 1.841 _refine_ls_shell.number_reflns_R_work 1020 _refine_ls_shell.R_factor_R_work 0.331 _refine_ls_shell.percent_reflns_obs 80.00 _refine_ls_shell.R_factor_R_free 0.335 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 64 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1024 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2FQ4 _struct.title 'The crystal structure of the transcriptional regulator (TetR family) from Bacillus cereus' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2FQ4 _struct_keywords.pdbx_keywords 'TRANSCRIPTION REGULATOR' _struct_keywords.text ;Transcriptional regulator, TetR, DNA-binding protein, Bacillus cereus, Structural Genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, TRANSCRIPTION REGULATOR ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details 'This protein existed as dimer.' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 10 ? GLY A 29 ? ASN A 10 GLY A 29 1 ? 20 HELX_P HELX_P2 2 THR A 34 ? LYS A 43 ? THR A 34 LYS A 43 1 ? 10 HELX_P HELX_P3 3 SER A 45 ? TRP A 53 ? SER A 45 TRP A 53 1 ? 9 HELX_P HELX_P4 4 ASN A 55 ? ALA A 68 ? ASN A 55 ALA A 68 1 ? 14 HELX_P HELX_P5 5 SER A 79 ? SER A 97 ? SER A 79 SER A 97 1 ? 19 HELX_P HELX_P6 6 THR A 101 ? GLN A 111 ? THR A 101 GLN A 111 1 ? 11 HELX_P HELX_P7 7 ASP A 113 ? TYR A 124 ? ASP A 113 TYR A 124 1 ? 12 HELX_P HELX_P8 8 TYR A 124 ? ARG A 142 ? TYR A 124 ARG A 142 1 ? 19 HELX_P HELX_P9 9 ASP A 150 ? VAL A 168 ? ASP A 150 VAL A 168 1 ? 19 HELX_P HELX_P10 10 ASP A 174 ? GLY A 188 ? ASP A 174 GLY A 188 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A VAL 60 C ? ? ? 1_555 A MSE 61 N ? ? A VAL 60 A MSE 61 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A MSE 61 C ? ? ? 1_555 A ASP 62 N ? ? A MSE 61 A ASP 62 1_555 ? ? ? ? ? ? ? 1.319 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 2FQ4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2FQ4 _atom_sites.fract_transf_matrix[1][1] 0.018907 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014782 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008989 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 GLN 2 2 ? ? ? A . n A 1 3 SER 3 3 ? ? ? A . n A 1 4 LYS 4 4 ? ? ? A . n A 1 5 ARG 5 5 ? ? ? A . n A 1 6 GLY 6 6 ? ? ? A . n A 1 7 ARG 7 7 ? ? ? A . n A 1 8 PRO 8 8 ? ? ? A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 TYR 22 22 22 TYR TYR A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 THR 48 48 48 THR THR A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 TRP 52 52 52 TRP TRP A . n A 1 53 TRP 53 53 53 TRP TRP A . n A 1 54 PRO 54 54 54 PRO PRO A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 MSE 61 61 61 MSE MSE A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 PRO 75 75 75 PRO PRO A . n A 1 76 ASP 76 76 76 ASP ASP A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 ASN 82 82 82 ASN ASN A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 HIS 87 87 87 HIS HIS A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 PHE 94 94 94 PHE PHE A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 ILE 96 96 96 ILE ILE A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 GLU 99 99 99 GLU GLU A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 ILE 102 102 102 ILE ILE A . n A 1 103 ILE 103 103 103 ILE ILE A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 VAL 107 107 107 VAL VAL A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 GLN 111 111 111 GLN GLN A . n A 1 112 PHE 112 112 112 PHE PHE A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 SER 114 114 114 SER SER A . n A 1 115 LYS 115 115 115 LYS LYS A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 TYR 120 120 120 TYR TYR A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 VAL 122 122 122 VAL VAL A . n A 1 123 ARG 123 123 123 ARG ARG A . n A 1 124 TYR 124 124 124 TYR TYR A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 GLN 126 126 126 GLN GLN A . n A 1 127 PRO 127 127 127 PRO PRO A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 ARG 129 129 129 ARG ARG A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 GLN 131 131 131 GLN GLN A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 GLN 134 134 134 GLN GLN A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 GLU 137 137 137 GLU GLU A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 ILE 140 140 140 ILE ILE A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 ARG 142 142 142 ARG ARG A . n A 1 143 GLY 143 143 143 GLY GLY A . n A 1 144 GLU 144 144 144 GLU GLU A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 LYS 146 146 146 LYS LYS A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 ASN 148 148 148 ASN ASN A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 ASP 150 150 150 ASP ASP A . n A 1 151 ILE 151 151 151 ILE ILE A . n A 1 152 GLU 152 152 152 GLU GLU A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 ILE 155 155 155 ILE ILE A . n A 1 156 ASP 156 156 156 ASP ASP A . n A 1 157 LEU 157 157 157 LEU LEU A . n A 1 158 ILE 158 158 158 ILE ILE A . n A 1 159 TYR 159 159 159 TYR TYR A . n A 1 160 GLY 160 160 160 GLY GLY A . n A 1 161 PRO 161 161 161 PRO PRO A . n A 1 162 ILE 162 162 162 ILE ILE A . n A 1 163 PHE 163 163 163 PHE PHE A . n A 1 164 TYR 164 164 164 TYR TYR A . n A 1 165 ARG 165 165 165 ARG ARG A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 THR 169 169 169 THR THR A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 GLU 171 171 171 GLU GLU A . n A 1 172 LYS 172 172 172 LYS LYS A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 ASP 174 174 174 ASP ASP A . n A 1 175 ASP 175 175 175 ASP ASP A . n A 1 176 SER 176 176 176 SER SER A . n A 1 177 TYR 177 177 177 TYR TYR A . n A 1 178 VAL 178 178 178 VAL VAL A . n A 1 179 HIS 179 179 179 HIS HIS A . n A 1 180 ASP 180 180 180 ASP ASP A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 VAL 182 182 182 VAL VAL A . n A 1 183 ILE 183 183 183 ILE ILE A . n A 1 184 ASN 184 184 184 ASN ASN A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 PHE 186 186 186 PHE PHE A . n A 1 187 GLU 187 187 187 GLU GLU A . n A 1 188 GLY 188 188 188 GLY GLY A . n A 1 189 ILE 189 189 189 ILE ILE A . n A 1 190 ARG 190 190 190 ARG ARG A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 ARG 192 192 192 ARG ARG A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 193 1 HOH HOH A . B 2 HOH 2 194 2 HOH HOH A . B 2 HOH 3 195 3 HOH HOH A . B 2 HOH 4 196 4 HOH HOH A . B 2 HOH 5 197 5 HOH HOH A . B 2 HOH 6 198 6 HOH HOH A . B 2 HOH 7 199 7 HOH HOH A . B 2 HOH 8 200 8 HOH HOH A . B 2 HOH 9 201 9 HOH HOH A . B 2 HOH 10 202 10 HOH HOH A . B 2 HOH 11 203 11 HOH HOH A . B 2 HOH 12 204 12 HOH HOH A . B 2 HOH 13 205 13 HOH HOH A . B 2 HOH 14 206 14 HOH HOH A . B 2 HOH 15 207 15 HOH HOH A . B 2 HOH 16 208 16 HOH HOH A . B 2 HOH 17 209 17 HOH HOH A . B 2 HOH 18 210 18 HOH HOH A . B 2 HOH 19 211 19 HOH HOH A . B 2 HOH 20 212 20 HOH HOH A . B 2 HOH 21 213 21 HOH HOH A . B 2 HOH 22 214 22 HOH HOH A . B 2 HOH 23 215 23 HOH HOH A . B 2 HOH 24 216 24 HOH HOH A . B 2 HOH 25 217 25 HOH HOH A . B 2 HOH 26 218 26 HOH HOH A . B 2 HOH 27 219 27 HOH HOH A . B 2 HOH 28 220 28 HOH HOH A . B 2 HOH 29 221 29 HOH HOH A . B 2 HOH 30 222 30 HOH HOH A . B 2 HOH 31 223 31 HOH HOH A . B 2 HOH 32 224 32 HOH HOH A . B 2 HOH 33 225 34 HOH HOH A . B 2 HOH 34 226 35 HOH HOH A . B 2 HOH 35 227 36 HOH HOH A . B 2 HOH 36 228 37 HOH HOH A . B 2 HOH 37 229 38 HOH HOH A . B 2 HOH 38 230 39 HOH HOH A . B 2 HOH 39 231 40 HOH HOH A . B 2 HOH 40 232 41 HOH HOH A . B 2 HOH 41 233 42 HOH HOH A . B 2 HOH 42 234 43 HOH HOH A . B 2 HOH 43 235 44 HOH HOH A . B 2 HOH 44 236 45 HOH HOH A . B 2 HOH 45 237 46 HOH HOH A . B 2 HOH 46 238 47 HOH HOH A . B 2 HOH 47 239 48 HOH HOH A . B 2 HOH 48 240 49 HOH HOH A . B 2 HOH 49 241 50 HOH HOH A . B 2 HOH 50 242 51 HOH HOH A . B 2 HOH 51 243 52 HOH HOH A . B 2 HOH 52 244 53 HOH HOH A . B 2 HOH 53 245 54 HOH HOH A . B 2 HOH 54 246 55 HOH HOH A . B 2 HOH 55 247 56 HOH HOH A . B 2 HOH 56 248 57 HOH HOH A . B 2 HOH 57 249 58 HOH HOH A . B 2 HOH 58 250 59 HOH HOH A . B 2 HOH 59 251 60 HOH HOH A . B 2 HOH 60 252 61 HOH HOH A . B 2 HOH 61 253 62 HOH HOH A . B 2 HOH 62 254 63 HOH HOH A . B 2 HOH 63 255 64 HOH HOH A . B 2 HOH 64 256 65 HOH HOH A . B 2 HOH 65 257 66 HOH HOH A . B 2 HOH 66 258 67 HOH HOH A . B 2 HOH 67 259 68 HOH HOH A . B 2 HOH 68 260 69 HOH HOH A . B 2 HOH 69 261 70 HOH HOH A . B 2 HOH 70 262 71 HOH HOH A . B 2 HOH 71 263 72 HOH HOH A . B 2 HOH 72 264 73 HOH HOH A . B 2 HOH 73 265 74 HOH HOH A . B 2 HOH 74 266 75 HOH HOH A . B 2 HOH 75 267 76 HOH HOH A . B 2 HOH 76 268 77 HOH HOH A . B 2 HOH 77 269 78 HOH HOH A . B 2 HOH 78 270 79 HOH HOH A . B 2 HOH 79 271 80 HOH HOH A . B 2 HOH 80 272 81 HOH HOH A . B 2 HOH 81 273 82 HOH HOH A . B 2 HOH 82 274 83 HOH HOH A . B 2 HOH 83 275 84 HOH HOH A . B 2 HOH 84 276 85 HOH HOH A . B 2 HOH 85 277 86 HOH HOH A . B 2 HOH 86 278 87 HOH HOH A . B 2 HOH 87 279 88 HOH HOH A . B 2 HOH 88 280 89 HOH HOH A . B 2 HOH 89 281 90 HOH HOH A . B 2 HOH 90 282 91 HOH HOH A . B 2 HOH 91 283 92 HOH HOH A . B 2 HOH 92 284 93 HOH HOH A . B 2 HOH 93 285 95 HOH HOH A . B 2 HOH 94 286 96 HOH HOH A . B 2 HOH 95 287 97 HOH HOH A . B 2 HOH 96 288 98 HOH HOH A . B 2 HOH 97 289 100 HOH HOH A . B 2 HOH 98 290 101 HOH HOH A . B 2 HOH 99 291 102 HOH HOH A . B 2 HOH 100 292 103 HOH HOH A . B 2 HOH 101 293 104 HOH HOH A . B 2 HOH 102 294 105 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 61 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 61 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4230 ? 1 MORE -22 ? 1 'SSA (A^2)' 17040 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 52.8910000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 55.6250000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 265 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-02-28 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-04-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Source and taxonomy' 5 3 'Structure model' 'Version format compliance' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' audit_author 2 4 'Structure model' citation_author 3 4 'Structure model' database_2 4 4 'Structure model' struct_conn 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_audit_author.identifier_ORCID' 2 4 'Structure model' '_citation_author.identifier_ORCID' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 24.7680 _pdbx_refine_tls.origin_y 25.0400 _pdbx_refine_tls.origin_z 15.2530 _pdbx_refine_tls.T[1][1] -0.0106 _pdbx_refine_tls.T[2][2] -0.0032 _pdbx_refine_tls.T[3][3] -0.2178 _pdbx_refine_tls.T[1][2] -0.0053 _pdbx_refine_tls.T[1][3] 0.0064 _pdbx_refine_tls.T[2][3] -0.0265 _pdbx_refine_tls.L[1][1] 0.7063 _pdbx_refine_tls.L[2][2] 2.8068 _pdbx_refine_tls.L[3][3] 2.9390 _pdbx_refine_tls.L[1][2] -0.8056 _pdbx_refine_tls.L[1][3] 0.0729 _pdbx_refine_tls.L[2][3] -1.6268 _pdbx_refine_tls.S[1][1] -0.0714 _pdbx_refine_tls.S[1][2] 0.0491 _pdbx_refine_tls.S[1][3] -0.0235 _pdbx_refine_tls.S[2][1] -0.1920 _pdbx_refine_tls.S[2][2] 0.0573 _pdbx_refine_tls.S[2][3] 0.0021 _pdbx_refine_tls.S[3][1] 0.2703 _pdbx_refine_tls.S[3][2] -0.0781 _pdbx_refine_tls.S[3][3] 0.0141 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 9 A 9 A 50 A 50 ? 'X-RAY DIFFRACTION' ? 2 1 A 51 A 51 A 90 A 90 ? 'X-RAY DIFFRACTION' ? 3 1 A 91 A 91 A 130 A 130 ? 'X-RAY DIFFRACTION' ? 4 1 A 131 A 131 A 170 A 170 ? 'X-RAY DIFFRACTION' ? 5 1 A 171 A 171 A 192 A 192 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 SBC-Collect 'data collection' . ? 2 HKL-2000 'data scaling' . ? 3 CNS phasing . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 119 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 NE _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 ARG _pdbx_validate_close_contact.auth_seq_id_2 123 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.92 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 128 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 128 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 128 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.66 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.36 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id TYR _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 124 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -104.63 _pdbx_validate_torsion.psi -61.57 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A GLN 2 ? A GLN 2 3 1 Y 1 A SER 3 ? A SER 3 4 1 Y 1 A LYS 4 ? A LYS 4 5 1 Y 1 A ARG 5 ? A ARG 5 6 1 Y 1 A GLY 6 ? A GLY 6 7 1 Y 1 A ARG 7 ? A ARG 7 8 1 Y 1 A PRO 8 ? A PRO 8 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #