HEADER OXIDOREDUCTASE 23-JAN-06 2FSV TITLE STRUCTURE OF TRANSHYDROGENASE (DI.D135N.NAD+)2(DIII.E155W.NADP+)1 TITLE 2 ASYMMETRIC COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: NAD(P) TRANSHYDROGENASE SUBUNIT ALPHA PART 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PYRIDINE NUCLEOTIDE TRANSHYDROGENASE SUBUNIT ALPHA 1, COMPND 5 NICOTINAMIDE NUCLEOTIDE TRANSHYDROGENASE SUBUNIT ALPHA 1, PROTON- COMPND 6 TRANSLOCATING TRANSHYDROGENASE COMPONENT 1, DI; COMPND 7 EC: 1.6.1.2; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: NAD(P) TRANSHYDROGENASE SUBUNIT BETA; COMPND 12 CHAIN: C; COMPND 13 FRAGMENT: DIII DOMAIN; COMPND 14 SYNONYM: PYRIDINE NUCLEOTIDE TRANSHYDROGENASE SUBUNIT BETA, COMPND 15 NICOTINAMIDE NUCLEOTIDE TRANSHYDROGENASE SUBUNIT BETA, PROTON- COMPND 16 TRANSLOCATING TRANSHYDROGENASE NADPH, -BINDING COMPONENT, DIII; COMPND 17 EC: 1.6.1.2; COMPND 18 ENGINEERED: YES; COMPND 19 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOSPIRILLUM RUBRUM; SOURCE 3 ORGANISM_TAXID: 1085; SOURCE 4 GENE: PNTAA, NNTA1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: C600; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGVB2; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: RHODOSPIRILLUM RUBRUM; SOURCE 12 ORGANISM_TAXID: 1085; SOURCE 13 GENE: PNTB, NNTB; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PET; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PJDV1 KEYWDS NAD(P) TRANSHYDROGENASE SUBUNITS, NAD+, NADP+, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR T.H.BRONDIJK,G.I.VAN BOXEL,O.C.MATHER,P.G.QUIRK,S.A.WHITE,J.B.JACKSON REVDAT 6 30-AUG-23 2FSV 1 REMARK REVDAT 5 20-OCT-21 2FSV 1 REMARK SEQADV REVDAT 4 13-JUL-11 2FSV 1 VERSN REVDAT 3 06-MAY-08 2FSV 1 REMARK VERSN REVDAT 2 23-MAY-06 2FSV 1 JRNL REVDAT 1 28-FEB-06 2FSV 0 JRNL AUTH T.H.BRONDIJK,G.I.VAN BOXEL,O.C.MATHER,P.G.QUIRK,S.A.WHITE, JRNL AUTH 2 J.B.JACKSON JRNL TITL THE ROLE OF INVARIANT AMINO ACID RESIDUES AT THE HYDRIDE JRNL TITL 2 TRANSFER SITE OF PROTON-TRANSLOCATING TRANSHYDROGENASE. JRNL REF J.BIOL.CHEM. V. 281 13345 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 16533815 JRNL DOI 10.1074/JBC.M513230200 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 47563 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : FROM PDB ENTRY 1NM5 REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2542 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3427 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 203 REMARK 3 BIN FREE R VALUE : 0.2930 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6669 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 110 REMARK 3 SOLVENT ATOMS : 382 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.65000 REMARK 3 B22 (A**2) : 3.32000 REMARK 3 B33 (A**2) : -2.67000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.291 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.225 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.167 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.868 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6891 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 6597 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9354 ; 1.184 ; 1.999 REMARK 3 BOND ANGLES OTHERS (DEGREES): 15344 ; 1.084 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 898 ; 5.251 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 233 ;39.260 ;24.678 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1195 ;13.748 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;10.835 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1131 ; 0.056 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7536 ; 0.001 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1231 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1187 ; 0.161 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 6350 ; 0.162 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3282 ; 0.154 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): 3676 ; 0.082 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 605 ; 0.151 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 1 ; 0.126 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 26 ; 0.129 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.211 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5802 ; 1.224 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1834 ; 0.147 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7230 ; 1.372 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2697 ; 0.743 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2124 ; 1.142 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 378 REMARK 3 RESIDUE RANGE : B 1 B 380 REMARK 3 RESIDUE RANGE : C 30 C 203 REMARK 3 ORIGIN FOR THE GROUP (A): -14.5247 -18.7357 25.6195 REMARK 3 T TENSOR REMARK 3 T11: -0.0866 T22: -0.1126 REMARK 3 T33: -0.1290 T12: 0.0774 REMARK 3 T13: -0.0138 T23: -0.0201 REMARK 3 L TENSOR REMARK 3 L11: 1.7959 L22: 0.5654 REMARK 3 L33: 0.8164 L12: 0.6685 REMARK 3 L13: -0.0909 L23: 0.0456 REMARK 3 S TENSOR REMARK 3 S11: -0.1039 S12: 0.0208 S13: 0.0449 REMARK 3 S21: -0.0790 S22: 0.1568 S23: 0.0379 REMARK 3 S31: -0.0361 S32: 0.0525 S33: -0.0529 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2FSV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-FEB-06. REMARK 100 THE DEPOSITION ID IS D_1000036270. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAR-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50105 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 31.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06660 REMARK 200 FOR THE DATA SET : 5.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.34000 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1HZZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16-20% 8K-PEG, 20-150 MM (NH4)2SO4,100 REMARK 280 MM MES PH 6.0 AND 10% GLYCEROL IN THE PRESENCE OF 50 MM NAD+ AND REMARK 280 5 MM NADP+, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.45600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 102.58600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.93550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 102.58600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.45600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.93550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 9070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 222 REMARK 465 ASP A 223 REMARK 465 GLU A 224 REMARK 465 ALA A 225 REMARK 465 MET A 226 REMARK 465 LYS A 227 REMARK 465 THR A 228 REMARK 465 ALA A 229 REMARK 465 GLU A 230 REMARK 465 THR A 231 REMARK 465 ALA A 232 REMARK 465 GLY A 233 REMARK 465 LEU A 379 REMARK 465 THR A 380 REMARK 465 GLY A 381 REMARK 465 GLN A 382 REMARK 465 GLY A 383 REMARK 465 ALA A 384 REMARK 465 ASP B 223 REMARK 465 GLU B 224 REMARK 465 ALA B 225 REMARK 465 MET B 226 REMARK 465 LYS B 227 REMARK 465 THR B 228 REMARK 465 ALA B 229 REMARK 465 GLU B 230 REMARK 465 THR B 231 REMARK 465 ALA B 232 REMARK 465 GLY B 233 REMARK 465 GLY B 234 REMARK 465 TYR B 235 REMARK 465 ALA B 236 REMARK 465 LYS B 237 REMARK 465 GLU B 238 REMARK 465 MET B 239 REMARK 465 GLY B 240 REMARK 465 GLU B 241 REMARK 465 GLY B 381 REMARK 465 GLN B 382 REMARK 465 GLY B 383 REMARK 465 ALA B 384 REMARK 465 MET C 1 REMARK 465 ASN C 2 REMARK 465 ARG C 3 REMARK 465 SER C 4 REMARK 465 ILE C 5 REMARK 465 PHE C 6 REMARK 465 ASN C 7 REMARK 465 VAL C 8 REMARK 465 ILE C 9 REMARK 465 LEU C 10 REMARK 465 GLY C 11 REMARK 465 GLY C 12 REMARK 465 PHE C 13 REMARK 465 GLY C 14 REMARK 465 SER C 15 REMARK 465 GLU C 16 REMARK 465 GLY C 17 REMARK 465 GLY C 18 REMARK 465 VAL C 19 REMARK 465 ALA C 20 REMARK 465 ALA C 21 REMARK 465 ALA C 22 REMARK 465 GLY C 23 REMARK 465 GLY C 24 REMARK 465 ALA C 25 REMARK 465 ALA C 26 REMARK 465 GLY C 27 REMARK 465 ASP C 28 REMARK 465 ARG C 29 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 17 47.43 -93.32 REMARK 500 VAL A 74 -73.70 -84.58 REMARK 500 VAL A 180 62.92 -115.63 REMARK 500 ASP A 350 -9.19 82.77 REMARK 500 LYS A 352 54.55 35.55 REMARK 500 PRO A 377 97.19 -68.97 REMARK 500 ALA B 17 45.66 -90.09 REMARK 500 VAL B 221 -62.77 -102.68 REMARK 500 ASN C 131 -74.22 -142.44 REMARK 500 THR C 140 -79.06 -91.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 LIGAND REMARK 600 NAD 600 IS ASSOCIATED WITH TRANSHYDROGENASE DI CHAIN A. REMARK 600 NAP 700 IS ASSOCIATED WITH TRANSHYDROGENASE DIII CHAIN C. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP C 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 802 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FRD RELATED DB: PDB REMARK 900 RELATED ID: 2FR8 RELATED DB: PDB REMARK 900 RELATED ID: 1U2D RELATED DB: PDB REMARK 900 RELATED ID: 1HZZ RELATED DB: PDB REMARK 900 RELATED ID: 1NM5 RELATED DB: PDB REMARK 900 RELATED ID: 1U28 RELATED DB: PDB DBREF 2FSV A 1 384 UNP Q60164 PNTAA_RHORU 1 384 DBREF 2FSV B 1 384 UNP Q60164 PNTAA_RHORU 1 384 DBREF 2FSV C 1 203 UNP Q59765 PNTB_RHORU 262 464 SEQADV 2FSV ASN A 135 UNP Q60164 ASP 135 ENGINEERED MUTATION SEQADV 2FSV ASN B 135 UNP Q60164 ASP 135 ENGINEERED MUTATION SEQADV 2FSV TRP C 155 UNP Q59765 GLU 416 ENGINEERED MUTATION SEQRES 1 A 384 MET LYS ILE ALA ILE PRO LYS GLU ARG ARG PRO GLY GLU SEQRES 2 A 384 ASP ARG VAL ALA ILE SER PRO GLU VAL VAL LYS LYS LEU SEQRES 3 A 384 VAL GLY LEU GLY PHE GLU VAL ILE VAL GLU GLN GLY ALA SEQRES 4 A 384 GLY VAL GLY ALA SER ILE THR ASP ASP ALA LEU THR ALA SEQRES 5 A 384 ALA GLY ALA THR ILE ALA SER THR ALA ALA GLN ALA LEU SEQRES 6 A 384 SER GLN ALA ASP VAL VAL TRP LYS VAL GLN ARG PRO MET SEQRES 7 A 384 THR ALA GLU GLU GLY THR ASP GLU VAL ALA LEU ILE LYS SEQRES 8 A 384 GLU GLY ALA VAL LEU MET CYS HIS LEU GLY ALA LEU THR SEQRES 9 A 384 ASN ARG PRO VAL VAL GLU ALA LEU THR LYS ARG LYS ILE SEQRES 10 A 384 THR ALA TYR ALA MET GLU LEU MET PRO ARG ILE SER ARG SEQRES 11 A 384 ALA GLN SER MET ASN ILE LEU SER SER GLN SER ASN LEU SEQRES 12 A 384 ALA GLY TYR ARG ALA VAL ILE ASP GLY ALA TYR GLU PHE SEQRES 13 A 384 ALA ARG ALA PHE PRO MET MET MET THR ALA ALA GLY THR SEQRES 14 A 384 VAL PRO PRO ALA ARG VAL LEU VAL PHE GLY VAL GLY VAL SEQRES 15 A 384 ALA GLY LEU GLN ALA ILE ALA THR ALA LYS ARG LEU GLY SEQRES 16 A 384 ALA VAL VAL MET ALA THR ASP VAL ARG ALA ALA THR LYS SEQRES 17 A 384 GLU GLN VAL GLU SER LEU GLY GLY LYS PHE ILE THR VAL SEQRES 18 A 384 ASP ASP GLU ALA MET LYS THR ALA GLU THR ALA GLY GLY SEQRES 19 A 384 TYR ALA LYS GLU MET GLY GLU GLU PHE ARG LYS LYS GLN SEQRES 20 A 384 ALA GLU ALA VAL LEU LYS GLU LEU VAL LYS THR ASP ILE SEQRES 21 A 384 ALA ILE THR THR ALA LEU ILE PRO GLY LYS PRO ALA PRO SEQRES 22 A 384 VAL LEU ILE THR GLU GLU MET VAL THR LYS MET LYS PRO SEQRES 23 A 384 GLY SER VAL ILE ILE ASP LEU ALA VAL GLU ALA GLY GLY SEQRES 24 A 384 ASN CYS PRO LEU SER GLU PRO GLY LYS ILE VAL VAL LYS SEQRES 25 A 384 HIS GLY VAL LYS ILE VAL GLY HIS THR ASN VAL PRO SER SEQRES 26 A 384 ARG VAL ALA ALA ASP ALA SER PRO LEU PHE ALA LYS ASN SEQRES 27 A 384 LEU LEU ASN PHE LEU THR PRO HIS VAL ASP LYS ASP THR SEQRES 28 A 384 LYS THR LEU VAL MET LYS LEU GLU ASP GLU THR VAL SER SEQRES 29 A 384 GLY THR CYS VAL THR ARG ASP GLY ALA ILE VAL HIS PRO SEQRES 30 A 384 ALA LEU THR GLY GLN GLY ALA SEQRES 1 B 384 MET LYS ILE ALA ILE PRO LYS GLU ARG ARG PRO GLY GLU SEQRES 2 B 384 ASP ARG VAL ALA ILE SER PRO GLU VAL VAL LYS LYS LEU SEQRES 3 B 384 VAL GLY LEU GLY PHE GLU VAL ILE VAL GLU GLN GLY ALA SEQRES 4 B 384 GLY VAL GLY ALA SER ILE THR ASP ASP ALA LEU THR ALA SEQRES 5 B 384 ALA GLY ALA THR ILE ALA SER THR ALA ALA GLN ALA LEU SEQRES 6 B 384 SER GLN ALA ASP VAL VAL TRP LYS VAL GLN ARG PRO MET SEQRES 7 B 384 THR ALA GLU GLU GLY THR ASP GLU VAL ALA LEU ILE LYS SEQRES 8 B 384 GLU GLY ALA VAL LEU MET CYS HIS LEU GLY ALA LEU THR SEQRES 9 B 384 ASN ARG PRO VAL VAL GLU ALA LEU THR LYS ARG LYS ILE SEQRES 10 B 384 THR ALA TYR ALA MET GLU LEU MET PRO ARG ILE SER ARG SEQRES 11 B 384 ALA GLN SER MET ASN ILE LEU SER SER GLN SER ASN LEU SEQRES 12 B 384 ALA GLY TYR ARG ALA VAL ILE ASP GLY ALA TYR GLU PHE SEQRES 13 B 384 ALA ARG ALA PHE PRO MET MET MET THR ALA ALA GLY THR SEQRES 14 B 384 VAL PRO PRO ALA ARG VAL LEU VAL PHE GLY VAL GLY VAL SEQRES 15 B 384 ALA GLY LEU GLN ALA ILE ALA THR ALA LYS ARG LEU GLY SEQRES 16 B 384 ALA VAL VAL MET ALA THR ASP VAL ARG ALA ALA THR LYS SEQRES 17 B 384 GLU GLN VAL GLU SER LEU GLY GLY LYS PHE ILE THR VAL SEQRES 18 B 384 ASP ASP GLU ALA MET LYS THR ALA GLU THR ALA GLY GLY SEQRES 19 B 384 TYR ALA LYS GLU MET GLY GLU GLU PHE ARG LYS LYS GLN SEQRES 20 B 384 ALA GLU ALA VAL LEU LYS GLU LEU VAL LYS THR ASP ILE SEQRES 21 B 384 ALA ILE THR THR ALA LEU ILE PRO GLY LYS PRO ALA PRO SEQRES 22 B 384 VAL LEU ILE THR GLU GLU MET VAL THR LYS MET LYS PRO SEQRES 23 B 384 GLY SER VAL ILE ILE ASP LEU ALA VAL GLU ALA GLY GLY SEQRES 24 B 384 ASN CYS PRO LEU SER GLU PRO GLY LYS ILE VAL VAL LYS SEQRES 25 B 384 HIS GLY VAL LYS ILE VAL GLY HIS THR ASN VAL PRO SER SEQRES 26 B 384 ARG VAL ALA ALA ASP ALA SER PRO LEU PHE ALA LYS ASN SEQRES 27 B 384 LEU LEU ASN PHE LEU THR PRO HIS VAL ASP LYS ASP THR SEQRES 28 B 384 LYS THR LEU VAL MET LYS LEU GLU ASP GLU THR VAL SER SEQRES 29 B 384 GLY THR CYS VAL THR ARG ASP GLY ALA ILE VAL HIS PRO SEQRES 30 B 384 ALA LEU THR GLY GLN GLY ALA SEQRES 1 C 203 MET ASN ARG SER ILE PHE ASN VAL ILE LEU GLY GLY PHE SEQRES 2 C 203 GLY SER GLU GLY GLY VAL ALA ALA ALA GLY GLY ALA ALA SEQRES 3 C 203 GLY ASP ARG SER VAL LYS ALA GLY SER ALA GLU ASP ALA SEQRES 4 C 203 ALA PHE ILE MET LYS ASN ALA SER LYS VAL ILE ILE VAL SEQRES 5 C 203 PRO GLY TYR GLY MET ALA VAL ALA GLN ALA GLN HIS ALA SEQRES 6 C 203 LEU ARG GLU MET ALA ASP VAL LEU LYS LYS GLU GLY VAL SEQRES 7 C 203 GLU VAL SER TYR ALA ILE HIS PRO VAL ALA GLY ARG MET SEQRES 8 C 203 PRO GLY HIS MET ASN VAL LEU LEU ALA GLU ALA ASN VAL SEQRES 9 C 203 PRO TYR ASP GLU VAL PHE GLU LEU GLU GLU ILE ASN SER SEQRES 10 C 203 SER PHE GLN THR ALA ASP VAL ALA PHE VAL ILE GLY ALA SEQRES 11 C 203 ASN ASP VAL THR ASN PRO ALA ALA LYS THR ASP PRO SER SEQRES 12 C 203 SER PRO ILE TYR GLY MET PRO ILE LEU ASP VAL TRP LYS SEQRES 13 C 203 ALA GLY THR VAL LEU PHE ILE LYS ARG SER MET ALA SER SEQRES 14 C 203 GLY TYR ALA GLY VAL GLU ASN GLU LEU PHE PHE ARG ASN SEQRES 15 C 203 ASN THR MET MET LEU PHE GLY ASP ALA LYS LYS MET THR SEQRES 16 C 203 GLU GLN ILE VAL GLN ALA MET ASN HET NAD A 600 44 HET GOL A 803 6 HET GOL B 801 6 HET GOL B 802 6 HET NAP C 700 48 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM GOL GLYCEROL HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 4 NAD C21 H27 N7 O14 P2 FORMUL 5 GOL 3(C3 H8 O3) FORMUL 8 NAP C21 H28 N7 O17 P3 FORMUL 9 HOH *382(H2 O) HELIX 1 1 SER A 19 GLY A 30 1 12 HELIX 2 2 THR A 46 ALA A 53 1 8 HELIX 3 3 THR A 60 SER A 66 1 7 HELIX 4 4 THR A 79 GLY A 83 5 5 HELIX 5 5 GLU A 86 ILE A 90 5 5 HELIX 6 6 ASN A 105 ARG A 115 1 11 HELIX 7 7 GLU A 123 MET A 125 5 3 HELIX 8 8 ILE A 128 MET A 134 5 7 HELIX 9 9 ASN A 135 PHE A 156 1 22 HELIX 10 10 GLY A 181 LEU A 194 1 14 HELIX 11 11 ALA A 206 LEU A 214 1 9 HELIX 12 12 GLY A 240 VAL A 256 1 17 HELIX 13 13 THR A 277 LYS A 283 1 7 HELIX 14 14 ALA A 294 GLY A 298 5 5 HELIX 15 15 ASN A 322 ARG A 326 5 5 HELIX 16 16 VAL A 327 THR A 344 1 18 HELIX 17 17 ASP A 360 THR A 366 1 7 HELIX 18 18 SER B 19 LEU B 29 1 11 HELIX 19 19 THR B 46 ALA B 53 1 8 HELIX 20 20 THR B 60 SER B 66 1 7 HELIX 21 21 THR B 79 GLY B 83 5 5 HELIX 22 22 GLU B 86 ILE B 90 5 5 HELIX 23 23 ASN B 105 ARG B 115 1 11 HELIX 24 24 GLU B 123 MET B 125 5 3 HELIX 25 25 ILE B 128 MET B 134 5 7 HELIX 26 26 ASN B 135 PHE B 156 1 22 HELIX 27 27 GLY B 181 LEU B 194 1 14 HELIX 28 28 ALA B 206 SER B 213 1 8 HELIX 29 29 LYS B 246 VAL B 256 1 11 HELIX 30 30 THR B 277 LYS B 283 1 7 HELIX 31 31 ALA B 294 GLY B 298 5 5 HELIX 32 32 ASN B 322 ARG B 326 5 5 HELIX 33 33 VAL B 327 THR B 344 1 18 HELIX 34 34 PRO B 345 VAL B 347 5 3 HELIX 35 35 ASP B 360 THR B 366 1 7 HELIX 36 36 SER C 35 ALA C 46 1 12 HELIX 37 37 GLY C 54 GLN C 61 1 8 HELIX 38 38 ALA C 62 GLU C 76 1 15 HELIX 39 39 GLY C 93 ALA C 102 1 10 HELIX 40 40 PRO C 105 ASP C 107 5 3 HELIX 41 41 LEU C 112 ASN C 116 1 5 HELIX 42 42 SER C 117 PHE C 119 5 3 HELIX 43 43 ASN C 131 LYS C 139 5 9 HELIX 44 44 ASP C 153 ALA C 157 5 5 HELIX 45 45 ASN C 176 ARG C 181 5 6 HELIX 46 46 ASP C 190 MET C 202 1 13 SHEET 1 A 8 ALA A 55 ALA A 58 0 SHEET 2 A 8 GLU A 32 GLU A 36 1 N VAL A 33 O THR A 56 SHEET 3 A 8 LYS A 2 ILE A 5 1 N ILE A 3 O GLU A 32 SHEET 4 A 8 VAL A 70 TRP A 72 1 O TRP A 72 N ALA A 4 SHEET 5 A 8 VAL A 95 CYS A 98 1 O VAL A 95 N VAL A 71 SHEET 6 A 8 THR A 118 ALA A 121 1 O THR A 118 N LEU A 96 SHEET 7 A 8 CYS A 367 ARG A 370 -1 O VAL A 368 N ALA A 119 SHEET 8 A 8 ALA A 373 ILE A 374 -1 O ALA A 373 N ARG A 370 SHEET 1 B 2 MET A 163 THR A 165 0 SHEET 2 B 2 GLY A 168 VAL A 170 -1 O VAL A 170 N MET A 163 SHEET 1 C 7 LYS A 217 PHE A 218 0 SHEET 2 C 7 VAL A 197 THR A 201 1 N VAL A 198 O LYS A 217 SHEET 3 C 7 ARG A 174 PHE A 178 1 N VAL A 175 O MET A 199 SHEET 4 C 7 ILE A 260 THR A 263 1 O ILE A 262 N PHE A 178 SHEET 5 C 7 VAL A 289 ASP A 292 1 O ILE A 291 N ALA A 261 SHEET 6 C 7 VAL A 315 GLY A 319 1 O VAL A 318 N ILE A 290 SHEET 7 C 7 LYS A 308 LYS A 312 -1 N VAL A 310 O ILE A 317 SHEET 1 D 2 VAL A 347 ASP A 348 0 SHEET 2 D 2 THR A 353 LEU A 354 -1 O THR A 353 N ASP A 348 SHEET 1 E 8 THR B 56 ALA B 58 0 SHEET 2 E 8 GLU B 32 GLU B 36 1 N VAL B 33 O THR B 56 SHEET 3 E 8 LYS B 2 ILE B 5 1 N ILE B 3 O GLU B 32 SHEET 4 E 8 VAL B 70 GLN B 75 1 O VAL B 70 N ALA B 4 SHEET 5 E 8 VAL B 95 HIS B 99 1 O VAL B 95 N VAL B 71 SHEET 6 E 8 THR B 118 ALA B 121 1 O THR B 118 N LEU B 96 SHEET 7 E 8 CYS B 367 ARG B 370 -1 O VAL B 368 N ALA B 119 SHEET 8 E 8 ALA B 373 ILE B 374 -1 O ALA B 373 N ARG B 370 SHEET 1 F 2 MET B 163 MET B 164 0 SHEET 2 F 2 THR B 169 VAL B 170 -1 O VAL B 170 N MET B 163 SHEET 1 G 7 LYS B 217 PHE B 218 0 SHEET 2 G 7 VAL B 197 THR B 201 1 N VAL B 198 O LYS B 217 SHEET 3 G 7 ARG B 174 PHE B 178 1 N VAL B 175 O MET B 199 SHEET 4 G 7 ILE B 260 THR B 263 1 O ILE B 262 N PHE B 178 SHEET 5 G 7 VAL B 289 ASP B 292 1 O ILE B 291 N ALA B 261 SHEET 6 G 7 VAL B 315 GLY B 319 1 O LYS B 316 N ILE B 290 SHEET 7 G 7 LYS B 308 LYS B 312 -1 N VAL B 310 O ILE B 317 SHEET 1 H 6 VAL C 109 GLU C 111 0 SHEET 2 H 6 GLU C 79 ILE C 84 1 N ILE C 84 O PHE C 110 SHEET 3 H 6 LYS C 48 PRO C 53 1 N ILE C 51 O SER C 81 SHEET 4 H 6 VAL C 124 ILE C 128 1 O PHE C 126 N VAL C 52 SHEET 5 H 6 THR C 159 LYS C 164 1 O ILE C 163 N VAL C 127 SHEET 6 H 6 THR C 184 PHE C 188 1 O LEU C 187 N PHE C 162 SITE 1 AC1 25 ARG A 127 GLN A 132 ASN A 135 SER A 138 SITE 2 AC1 25 VAL A 180 GLY A 181 VAL A 182 ASP A 202 SITE 3 AC1 25 VAL A 203 ARG A 204 GLY A 234 ALA A 236 SITE 4 AC1 25 GLN A 247 THR A 264 ALA A 265 LEU A 266 SITE 5 AC1 25 PRO A 273 LEU A 275 HOH A 823 HOH A 836 SITE 6 AC1 25 HOH A 839 HOH A 858 HOH A 868 HOH A 883 SITE 7 AC1 25 HOH A 909 SITE 1 AC2 27 GLN B 132 TYR C 55 GLY C 56 ALA C 60 SITE 2 AC2 27 VAL C 87 ALA C 88 GLY C 89 ARG C 90 SITE 3 AC2 27 MET C 91 PRO C 92 GLY C 129 ALA C 130 SITE 4 AC2 27 ASN C 131 ASP C 132 VAL C 133 LYS C 164 SITE 5 AC2 27 ARG C 165 SER C 166 ALA C 168 SER C 169 SITE 6 AC2 27 GLY C 170 TYR C 171 ASP C 190 ALA C 191 SITE 7 AC2 27 HOH C 732 HOH C 746 HOH C 759 SITE 1 AC3 5 GLN A 75 ARG A 76 HIS A 99 ASN A 105 SITE 2 AC3 5 HOH A 949 SITE 1 AC4 7 ARG B 15 HIS B 99 GLU B 296 ASN B 322 SITE 2 AC4 7 HOH B 874 HOH B 877 HOH B 916 SITE 1 AC5 6 GLN B 75 ARG B 76 HIS B 99 LEU B 100 SITE 2 AC5 6 ASN B 105 HOH B 962 CRYST1 72.912 73.871 205.172 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013715 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013537 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004874 0.00000