HEADER TRANSFERASE 23-JAN-06 2FT0 TITLE CRYSTAL STRUCTURE OF TDP-FUCOSAMINE ACETYLTRANSFERASE (WECD)- COMPLEX TITLE 2 WITH ACETYL-COA COMPND MOL_ID: 1; COMPND 2 MOLECULE: TDP-FUCOSAMINE ACETYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 199310; SOURCE 4 STRAIN: CFT073; SOURCE 5 GENE: WECD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFO4 KEYWDS GNAT FOLD ACETYLTRANSFERASE, STRUCTURAL GENOMICS, MONTREAL-KINGSTON KEYWDS 2 BACTERIAL STRUCTURAL GENOMICS INITIATIVE, BSGI, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.N.HUNG,E.RANGARAJAN,C.MUNGER,G.NADEAU,T.SULEA,A.MATTE,MONTREAL- AUTHOR 2 KINGSTON BACTERIAL STRUCTURAL GENOMICS INITIATIVE (BSGI) REVDAT 4 30-AUG-23 2FT0 1 REMARK SEQADV REVDAT 3 13-JUL-11 2FT0 1 VERSN REVDAT 2 24-FEB-09 2FT0 1 VERSN REVDAT 1 01-AUG-06 2FT0 0 JRNL AUTH M.N.HUNG,E.RANGARAJAN,C.MUNGER,G.NADEAU,T.SULEA,A.MATTE JRNL TITL CRYSTAL STRUCTURE OF TDP-FUCOSAMINE ACETYLTRANSFERASE (WECD) JRNL TITL 2 FROM ESCHERICHIA COLI, AN ENZYME REQUIRED FOR JRNL TITL 3 ENTEROBACTERIAL COMMON ANTIGEN SYNTHESIS. JRNL REF J.BACTERIOL. V. 188 5606 2006 JRNL REFN ISSN 0021-9193 JRNL PMID 16855251 JRNL DOI 10.1128/JB.00306-06 REMARK 2 REMARK 2 RESOLUTION. 1.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 62158 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3259 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.66 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.71 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3722 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.3130 REMARK 3 BIN FREE R VALUE SET COUNT : 198 REMARK 3 BIN FREE R VALUE : 0.3630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3384 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 102 REMARK 3 SOLVENT ATOMS : 412 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.53000 REMARK 3 B22 (A**2) : 0.53000 REMARK 3 B33 (A**2) : -1.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.100 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.095 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.063 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.848 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3545 ; 0.009 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4848 ; 1.298 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 442 ; 5.604 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 154 ;34.060 ;22.922 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 517 ;12.460 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 34 ;13.291 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 544 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2707 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1643 ; 0.201 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2493 ; 0.302 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 356 ; 0.142 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 49 ; 0.185 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 25 ; 0.153 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2251 ; 0.873 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3496 ; 1.321 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1485 ; 2.213 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1352 ; 3.310 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NO SIGMA CUTOFF USED DURING REFINEMENT REMARK 4 REMARK 4 2FT0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-FEB-06. REMARK 100 THE DEPOSITION ID IS D_1000036275. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAR-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65489 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.660 REMARK 200 RESOLUTION RANGE LOW (A) : 39.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05300 REMARK 200 FOR THE DATA SET : 18.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2FS5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM ACETATE, 10 MM ZINC REMARK 280 SULFATE, 2 MM ACETYL-COA, 5 MM TDP, PH 4.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.06100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 42.45000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 42.45000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 115.59150 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 42.45000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 42.45000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 38.53050 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 42.45000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.45000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 115.59150 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 42.45000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.45000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 38.53050 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 77.06100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL DIMER IS CONTAINED WITHIN THE ASSYMMETRIC REMARK 300 UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 SER A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 PRO A 2 REMARK 465 MET B -10 REMARK 465 GLY B -9 REMARK 465 SER B -8 REMARK 465 SER B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 PRO B 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE B 135 CG CD1 CD2 CE1 CE2 CZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 29 CG CD OE1 OE2 REMARK 480 SER B 28 OG REMARK 480 GLU B 29 CD OE1 OE2 REMARK 480 GLU B 90 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER B 28 CB SER B 28 OG -0.277 REMARK 500 GLU B 29 CG GLU B 29 CD 0.892 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 75 CA - CB - CG ANGL. DEV. = 16.8 DEGREES REMARK 500 GLU B 29 CB - CG - CD ANGL. DEV. = -35.1 DEGREES REMARK 500 GLU B 29 CG - CD - OE2 ANGL. DEV. = -12.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 20 74.38 -115.99 REMARK 500 PRO A 40 34.76 -82.51 REMARK 500 ASN A 78 -106.18 -123.60 REMARK 500 GLN A 106 45.00 -89.36 REMARK 500 SER B 81 160.51 80.92 REMARK 500 GLN B 106 52.15 -110.00 REMARK 500 PHE B 135 -82.14 -118.57 REMARK 500 ASN B 159 -165.46 -160.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACO A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACO B 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FS5 RELATED DB: PDB REMARK 900 WECD APO-FORM REMARK 900 RELATED ID: WECD_ECOL6 RELATED DB: TARGETDB DBREF 2FT0 A 2 224 UNP Q8FBQ3 Q8FBQ3_ECOL6 2 224 DBREF 2FT0 B 2 224 UNP Q8FBQ3 Q8FBQ3_ECOL6 2 224 SEQADV 2FT0 MET A -10 UNP Q8FBQ3 CLONING ARTIFACT SEQADV 2FT0 GLY A -9 UNP Q8FBQ3 CLONING ARTIFACT SEQADV 2FT0 SER A -8 UNP Q8FBQ3 CLONING ARTIFACT SEQADV 2FT0 SER A -7 UNP Q8FBQ3 CLONING ARTIFACT SEQADV 2FT0 HIS A -6 UNP Q8FBQ3 EXPRESSION TAG SEQADV 2FT0 HIS A -5 UNP Q8FBQ3 EXPRESSION TAG SEQADV 2FT0 HIS A -4 UNP Q8FBQ3 EXPRESSION TAG SEQADV 2FT0 HIS A -3 UNP Q8FBQ3 EXPRESSION TAG SEQADV 2FT0 HIS A -2 UNP Q8FBQ3 EXPRESSION TAG SEQADV 2FT0 HIS A -1 UNP Q8FBQ3 EXPRESSION TAG SEQADV 2FT0 GLY A 0 UNP Q8FBQ3 CLONING ARTIFACT SEQADV 2FT0 SER A 1 UNP Q8FBQ3 CLONING ARTIFACT SEQADV 2FT0 MET B -10 UNP Q8FBQ3 CLONING ARTIFACT SEQADV 2FT0 GLY B -9 UNP Q8FBQ3 CLONING ARTIFACT SEQADV 2FT0 SER B -8 UNP Q8FBQ3 CLONING ARTIFACT SEQADV 2FT0 SER B -7 UNP Q8FBQ3 CLONING ARTIFACT SEQADV 2FT0 HIS B -6 UNP Q8FBQ3 EXPRESSION TAG SEQADV 2FT0 HIS B -5 UNP Q8FBQ3 EXPRESSION TAG SEQADV 2FT0 HIS B -4 UNP Q8FBQ3 EXPRESSION TAG SEQADV 2FT0 HIS B -3 UNP Q8FBQ3 EXPRESSION TAG SEQADV 2FT0 HIS B -2 UNP Q8FBQ3 EXPRESSION TAG SEQADV 2FT0 HIS B -1 UNP Q8FBQ3 EXPRESSION TAG SEQADV 2FT0 GLY B 0 UNP Q8FBQ3 CLONING ARTIFACT SEQADV 2FT0 SER B 1 UNP Q8FBQ3 CLONING ARTIFACT SEQRES 1 A 235 MET GLY SER SER HIS HIS HIS HIS HIS HIS GLY SER PRO SEQRES 2 A 235 VAL ARG ALA SER ILE GLU PRO LEU THR TRP GLU ASN ALA SEQRES 3 A 235 PHE PHE GLY VAL ASN SER ALA ILE VAL ARG ILE THR SER SEQRES 4 A 235 GLU ALA PRO LEU LEU THR PRO ASP ALA LEU ALA PRO TRP SEQRES 5 A 235 SER ARG VAL GLN ALA LYS ILE ALA ALA SER ASN THR GLY SEQRES 6 A 235 GLU LEU ASP ALA LEU GLN GLN LEU GLY PHE SER LEU VAL SEQRES 7 A 235 GLU GLY GLU VAL ASP LEU ALA LEU PRO VAL ASN ASN VAL SEQRES 8 A 235 SER ASP SER GLY ALA VAL VAL ALA GLN GLU THR ASP ILE SEQRES 9 A 235 PRO ALA LEU ARG GLN LEU ALA SER ALA ALA PHE ALA GLN SEQRES 10 A 235 SER ARG PHE ARG ALA PRO TRP TYR ALA PRO ASP ALA SER SEQRES 11 A 235 GLY ARG PHE TYR ALA GLN TRP ILE GLU ASN ALA VAL ARG SEQRES 12 A 235 GLY THR PHE ASP HIS GLN CYS LEU ILE LEU ARG ALA ALA SEQRES 13 A 235 SER GLY ASP ILE ARG GLY TYR VAL SER LEU ARG GLU LEU SEQRES 14 A 235 ASN ALA THR ASP ALA ARG ILE GLY LEU LEU ALA GLY ARG SEQRES 15 A 235 GLY ALA GLY ALA GLU LEU MET GLN THR ALA LEU ASN TRP SEQRES 16 A 235 ALA TYR ALA ARG GLY LYS THR THR LEU ARG VAL ALA THR SEQRES 17 A 235 GLN MET GLY ASN THR ALA ALA LEU LYS ARG TYR ILE GLN SEQRES 18 A 235 SER GLY ALA ASN VAL GLU SER THR ALA TYR TRP LEU TYR SEQRES 19 A 235 ARG SEQRES 1 B 235 MET GLY SER SER HIS HIS HIS HIS HIS HIS GLY SER PRO SEQRES 2 B 235 VAL ARG ALA SER ILE GLU PRO LEU THR TRP GLU ASN ALA SEQRES 3 B 235 PHE PHE GLY VAL ASN SER ALA ILE VAL ARG ILE THR SER SEQRES 4 B 235 GLU ALA PRO LEU LEU THR PRO ASP ALA LEU ALA PRO TRP SEQRES 5 B 235 SER ARG VAL GLN ALA LYS ILE ALA ALA SER ASN THR GLY SEQRES 6 B 235 GLU LEU ASP ALA LEU GLN GLN LEU GLY PHE SER LEU VAL SEQRES 7 B 235 GLU GLY GLU VAL ASP LEU ALA LEU PRO VAL ASN ASN VAL SEQRES 8 B 235 SER ASP SER GLY ALA VAL VAL ALA GLN GLU THR ASP ILE SEQRES 9 B 235 PRO ALA LEU ARG GLN LEU ALA SER ALA ALA PHE ALA GLN SEQRES 10 B 235 SER ARG PHE ARG ALA PRO TRP TYR ALA PRO ASP ALA SER SEQRES 11 B 235 GLY ARG PHE TYR ALA GLN TRP ILE GLU ASN ALA VAL ARG SEQRES 12 B 235 GLY THR PHE ASP HIS GLN CYS LEU ILE LEU ARG ALA ALA SEQRES 13 B 235 SER GLY ASP ILE ARG GLY TYR VAL SER LEU ARG GLU LEU SEQRES 14 B 235 ASN ALA THR ASP ALA ARG ILE GLY LEU LEU ALA GLY ARG SEQRES 15 B 235 GLY ALA GLY ALA GLU LEU MET GLN THR ALA LEU ASN TRP SEQRES 16 B 235 ALA TYR ALA ARG GLY LYS THR THR LEU ARG VAL ALA THR SEQRES 17 B 235 GLN MET GLY ASN THR ALA ALA LEU LYS ARG TYR ILE GLN SEQRES 18 B 235 SER GLY ALA ASN VAL GLU SER THR ALA TYR TRP LEU TYR SEQRES 19 B 235 ARG HET ACO A 600 51 HET ACO B 601 51 HETNAM ACO ACETYL COENZYME *A FORMUL 3 ACO 2(C23 H38 N7 O17 P3 S) FORMUL 5 HOH *412(H2 O) HELIX 1 1 LEU A 10 GLY A 18 1 9 HELIX 2 2 THR A 34 ALA A 39 1 6 HELIX 3 3 ASN A 52 LEU A 62 1 11 HELIX 4 4 GLN A 89 THR A 91 5 3 HELIX 5 5 ASP A 92 PHE A 104 1 13 HELIX 6 6 ASP A 117 ARG A 132 1 16 HELIX 7 7 ALA A 173 ARG A 188 1 16 HELIX 8 8 ASN A 201 SER A 211 1 11 HELIX 9 9 LEU B 10 GLY B 18 1 9 HELIX 10 10 THR B 34 ALA B 39 1 6 HELIX 11 11 ASN B 52 GLN B 61 1 10 HELIX 12 12 GLN B 89 THR B 91 5 3 HELIX 13 13 ASP B 92 PHE B 104 1 13 HELIX 14 14 ASP B 117 GLY B 133 1 17 HELIX 15 15 ALA B 173 ARG B 188 1 16 HELIX 16 16 ASN B 201 SER B 211 1 11 SHEET 1 A10 ALA A 5 PRO A 9 0 SHEET 2 A10 SER A 21 ILE A 26 -1 O ILE A 23 N GLU A 8 SHEET 3 A10 ARG A 43 ALA A 49 1 O GLN A 45 N VAL A 24 SHEET 4 A10 ASN A 214 TYR A 223 -1 O LEU A 222 N ALA A 46 SHEET 5 A10 SER A 65 PRO A 76 -1 N ASP A 72 O GLU A 216 SHEET 6 A10 THR A 192 GLN A 198 -1 O VAL A 195 N LEU A 73 SHEET 7 A10 ASP A 162 ALA A 169 1 N ILE A 165 O ARG A 194 SHEET 8 A10 ILE A 149 GLU A 157 -1 N SER A 154 O LEU A 167 SHEET 9 A10 HIS A 137 ARG A 143 -1 N LEU A 142 O ARG A 150 SHEET 10 A10 VAL A 86 VAL A 87 -1 N VAL A 86 O ILE A 141 SHEET 1 B10 ALA B 5 PRO B 9 0 SHEET 2 B10 SER B 21 ILE B 26 -1 O ILE B 23 N GLU B 8 SHEET 3 B10 ARG B 43 ALA B 49 1 O GLN B 45 N VAL B 24 SHEET 4 B10 ASN B 214 TYR B 223 -1 O LEU B 222 N ALA B 46 SHEET 5 B10 SER B 65 PRO B 76 -1 N ASP B 72 O GLU B 216 SHEET 6 B10 THR B 192 GLN B 198 -1 O VAL B 195 N LEU B 73 SHEET 7 B10 ASP B 162 ALA B 169 1 N ALA B 163 O ARG B 194 SHEET 8 B10 ILE B 149 GLU B 157 -1 N SER B 154 O LEU B 167 SHEET 9 B10 GLN B 138 ARG B 143 -1 N LEU B 140 O VAL B 153 SHEET 10 B10 VAL B 86 VAL B 87 -1 N VAL B 86 O ILE B 141 CISPEP 1 ALA A 111 PRO A 112 0 7.51 CISPEP 2 ALA B 111 PRO B 112 0 2.70 SITE 1 AC1 23 PHE A 104 GLY A 166 LEU A 167 LEU A 168 SITE 2 AC1 23 ALA A 169 GLY A 170 ARG A 171 GLY A 172 SITE 3 AC1 23 ALA A 173 GLY A 174 VAL A 195 ALA A 196 SITE 4 AC1 23 THR A 197 ASN A 201 ALA A 203 ARG A 207 SITE 5 AC1 23 TYR A 208 HOH A 628 HOH A 753 HOH A 794 SITE 6 AC1 23 HOH A 808 HOH A 811 HOH A 840 SITE 1 AC2 17 PHE B 104 GLY B 166 LEU B 167 LEU B 168 SITE 2 AC2 17 ALA B 169 GLY B 170 ARG B 171 GLY B 172 SITE 3 AC2 17 ALA B 173 GLY B 174 ALA B 196 THR B 197 SITE 4 AC2 17 ASN B 201 ALA B 203 ARG B 207 TYR B 208 SITE 5 AC2 17 HOH B 720 CRYST1 84.900 84.900 154.122 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011779 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011779 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006488 0.00000