data_2FTX # _entry.id 2FTX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2FTX RCSB RCSB036307 WWPDB D_1000036307 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2FTX _pdbx_database_status.recvd_initial_deposition_date 2006-01-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wei, R.R.' 1 'Harrison, S.C.' 2 # _citation.id primary _citation.title 'Atomic Structure of the kinetochore Spc24p/Spc25p globular domain reveals a novel fold' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Wei, R.R.' 1 primary 'Harrison, S.C.' 2 primary 'Schnell, J.R.' 3 primary 'Chou, J.J.' 4 # _cell.entry_id 2FTX _cell.length_a 84.907 _cell.length_b 84.907 _cell.length_c 93.195 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2FTX _symmetry.space_group_name_H-M 'I 41 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical 25.2 kDa protein in AFG3-SEB2 intergenic region' 10029.981 1 ? ? 'Spc25p globular domain' ? 2 polymer man 'Hypothetical 24.6 kDa protein in ILV2-ADE17 intergenic region' 7532.432 1 ? ? 'Spc24p globular domain' ? 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 5 water nat water 18.015 79 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;(MSE)NDAAEVALYERLLQLRVLPGASDVHDVRFVFGDDSRCWIEVA(MSE)HGDHVIGNSHPALDPKSRATLEHVLTVQ GDLAAFLVVARD(MSE)LLASL ; ;MNDAAEVALYERLLQLRVLPGASDVHDVRFVFGDDSRCWIEVAMHGDHVIGNSHPALDPKSRATLEHVLTVQGDLAAFLV VARDMLLASL ; A ? 2 'polypeptide(L)' no yes 'GSH(MSE)EANENILKLKLYRSLGVILDLENDQVLINRKNDGNIDILPLDNNLSDFYKTKYIWERLGK' GSHMEANENILKLKLYRSLGVILDLENDQVLINRKNDGNIDILPLDNNLSDFYKTKYIWERLGK B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 ASN n 1 3 ASP n 1 4 ALA n 1 5 ALA n 1 6 GLU n 1 7 VAL n 1 8 ALA n 1 9 LEU n 1 10 TYR n 1 11 GLU n 1 12 ARG n 1 13 LEU n 1 14 LEU n 1 15 GLN n 1 16 LEU n 1 17 ARG n 1 18 VAL n 1 19 LEU n 1 20 PRO n 1 21 GLY n 1 22 ALA n 1 23 SER n 1 24 ASP n 1 25 VAL n 1 26 HIS n 1 27 ASP n 1 28 VAL n 1 29 ARG n 1 30 PHE n 1 31 VAL n 1 32 PHE n 1 33 GLY n 1 34 ASP n 1 35 ASP n 1 36 SER n 1 37 ARG n 1 38 CYS n 1 39 TRP n 1 40 ILE n 1 41 GLU n 1 42 VAL n 1 43 ALA n 1 44 MSE n 1 45 HIS n 1 46 GLY n 1 47 ASP n 1 48 HIS n 1 49 VAL n 1 50 ILE n 1 51 GLY n 1 52 ASN n 1 53 SER n 1 54 HIS n 1 55 PRO n 1 56 ALA n 1 57 LEU n 1 58 ASP n 1 59 PRO n 1 60 LYS n 1 61 SER n 1 62 ARG n 1 63 ALA n 1 64 THR n 1 65 LEU n 1 66 GLU n 1 67 HIS n 1 68 VAL n 1 69 LEU n 1 70 THR n 1 71 VAL n 1 72 GLN n 1 73 GLY n 1 74 ASP n 1 75 LEU n 1 76 ALA n 1 77 ALA n 1 78 PHE n 1 79 LEU n 1 80 VAL n 1 81 VAL n 1 82 ALA n 1 83 ARG n 1 84 ASP n 1 85 MSE n 1 86 LEU n 1 87 LEU n 1 88 ALA n 1 89 SER n 1 90 LEU n 2 1 GLY n 2 2 SER n 2 3 HIS n 2 4 MSE n 2 5 GLU n 2 6 ALA n 2 7 ASN n 2 8 GLU n 2 9 ASN n 2 10 ILE n 2 11 LEU n 2 12 LYS n 2 13 LEU n 2 14 LYS n 2 15 LEU n 2 16 TYR n 2 17 ARG n 2 18 SER n 2 19 LEU n 2 20 GLY n 2 21 VAL n 2 22 ILE n 2 23 LEU n 2 24 ASP n 2 25 LEU n 2 26 GLU n 2 27 ASN n 2 28 ASP n 2 29 GLN n 2 30 VAL n 2 31 LEU n 2 32 ILE n 2 33 ASN n 2 34 ARG n 2 35 LYS n 2 36 ASN n 2 37 ASP n 2 38 GLY n 2 39 ASN n 2 40 ILE n 2 41 ASP n 2 42 ILE n 2 43 LEU n 2 44 PRO n 2 45 LEU n 2 46 ASP n 2 47 ASN n 2 48 ASN n 2 49 LEU n 2 50 SER n 2 51 ASP n 2 52 PHE n 2 53 TYR n 2 54 LYS n 2 55 THR n 2 56 LYS n 2 57 TYR n 2 58 ILE n 2 59 TRP n 2 60 GLU n 2 61 ARG n 2 62 LEU n 2 63 GLY n 2 64 LYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ;baker's yeast ; Saccharomyces YER018C ? ? ? ? ? ? 'Saccharomyces cerevisiae' 4932 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? Rosetta ? ? ? ? ? plasmid ? ? ? pET3aTr ? ? 2 1 sample ? ? ? ;baker's yeast ; Saccharomyces 'YMR117C, YM9718.16C' ? ? ? ? ? ? 'Saccharomyces cerevisiae' 4932 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? Rosetta ? ? ? ? ? plasmid ? ? ? pET3aTr ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP YEK8_YEAST P40014 1 ;NDAAEVALYERLLQLRVLPGASDVHDVRFVFGDDSRCWIEVAMHGDHVIGNSHPALDPKSRATLEHVLTVQGDLAAFLVV ARDMLLASL ; 133 ? 2 UNP YM06_YEAST Q04477 2 EANENILKLKLYRSLGVILDLENDQVLINRKNDGNIDILPLDNNLSDFYKTKYIWERLGK 154 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2FTX A 2 ? 90 ? P40014 133 ? 221 ? 133 221 2 2 2FTX B 5 ? 64 ? Q04477 154 ? 213 ? 154 213 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2FTX MSE A 1 ? UNP P40014 ? ? 'INITIATING METHIONINE' 132 1 1 2FTX MSE A 44 ? UNP P40014 MET 175 'MODIFIED RESIDUE' 175 2 1 2FTX MSE A 85 ? UNP P40014 MET 216 'MODIFIED RESIDUE' 216 3 2 2FTX GLY B 1 ? UNP Q04477 ? ? 'CLONING ARTIFACT' 150 4 2 2FTX SER B 2 ? UNP Q04477 ? ? 'CLONING ARTIFACT' 151 5 2 2FTX HIS B 3 ? UNP Q04477 ? ? 'CLONING ARTIFACT' 152 6 2 2FTX MSE B 4 ? UNP Q04477 ? ? 'CLONING ARTIFACT' 153 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2FTX _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.39 _exptl_crystal.density_percent_sol 48.54 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 10.50 _exptl_crystal_grow.pdbx_details '0.1 M CAPS, pH 10.5, 1.2 M NaH2PO4/0.8 M K2HPO4, 0.2 M Li2SO4, VAPOR DIFFUSION, HANGING DROP, temperature 293K, pH 10.50' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 110.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2005-01-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DOUBLE CRYSTAL, SI(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97950 1.0 2 0.97967 1.0 3 0.953725 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.97950, 0.97967, 0.953725' # _reflns.entry_id 2FTX _reflns.observed_criterion_sigma_I 1.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 1.900 _reflns.number_obs 13528 _reflns.number_all ? _reflns.percent_possible_obs 98.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_all 97.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2FTX _refine.ls_number_reflns_obs 12988 _refine.ls_number_reflns_all 13014 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 99.8 _refine.ls_R_factor_obs 0.21 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.209 _refine.ls_R_factor_R_free 0.226 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 685 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.941 _refine.correlation_coeff_Fo_to_Fc_free 0.931 _refine.B_iso_mean 24.377 _refine.aniso_B[1][1] -0.64 _refine.aniso_B[2][2] -0.64 _refine.aniso_B[3][3] 1.29 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method ? _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details 'RANDOMLY SELECTED' _refine.pdbx_overall_ESU_R 0.161 _refine.pdbx_overall_ESU_R_Free 0.136 _refine.overall_SU_ML 0.092 _refine.overall_SU_B 3.096 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2FTX _refine_analyze.Luzzati_coordinate_error_obs 0.161 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free 0.136 _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1182 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 79 _refine_hist.number_atoms_total 1267 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.017 0.022 ? 1205 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.548 1.972 ? 1633 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 11.925 5.000 ? 147 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 30.911 24.407 ? 59 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.320 15.000 ? 212 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.310 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.102 0.200 ? 189 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.020 ? 899 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.206 0.200 ? 500 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.307 0.200 ? 806 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.110 0.200 ? 70 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.222 0.200 ? 37 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.085 0.200 ? 13 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.211 1.500 ? 739 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.162 2.000 ? 1186 'X-RAY DIFFRACTION' ? r_scbond_it 2.851 3.000 ? 478 'X-RAY DIFFRACTION' ? r_scangle_it 4.460 4.500 ? 447 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 1.95 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.22 _refine_ls_shell.percent_reflns_obs 97.40 _refine_ls_shell.R_factor_R_free 0.252 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 63 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2FTX _struct.title 'Crystal structure of the yeast kinetochore Spc24/Spc25 globular domain' _struct.pdbx_descriptor 'Hypothetical 25.2 kDa protein in AFG3-SEB2 intergenic region, Hypothetical 24.6 kDa protein in ILV2-ADE17 intergenic region' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2FTX _struct_keywords.pdbx_keywords 'structural protein, protein binding' _struct_keywords.text 'alpha-beta, complex, coiled-coil, structural protein, protein binding' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 2 ? GLN A 15 ? ASN A 133 GLN A 146 1 ? 14 HELX_P HELX_P2 2 ASP A 58 ? VAL A 71 ? ASP A 189 VAL A 202 1 ? 14 HELX_P HELX_P3 3 ASP A 74 ? SER A 89 ? ASP A 205 SER A 220 1 ? 16 HELX_P HELX_P4 4 ASN B 7 ? LEU B 19 ? ASN B 156 LEU B 168 1 ? 13 HELX_P HELX_P5 5 LEU B 25 ? ASN B 27 ? LEU B 174 ASN B 176 5 ? 3 HELX_P HELX_P6 6 SER B 50 ? GLY B 63 ? SER B 199 GLY B 212 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 1 C ? ? ? 1_555 A ASN 2 N ? ? A MSE 132 A ASN 133 1_555 ? ? ? ? ? ? ? 1.330 ? covale2 covale ? ? A ALA 43 C ? ? ? 1_555 A MSE 44 N ? ? A ALA 174 A MSE 175 1_555 ? ? ? ? ? ? ? 1.327 ? covale3 covale ? ? A MSE 44 C ? ? ? 1_555 A HIS 45 N ? ? A MSE 175 A HIS 176 1_555 ? ? ? ? ? ? ? 1.343 ? covale4 covale ? ? A ASP 84 C ? ? ? 1_555 A MSE 85 N ? ? A ASP 215 A MSE 216 1_555 ? ? ? ? ? ? ? 1.330 ? covale5 covale ? ? A MSE 85 C ? ? ? 1_555 A LEU 86 N ? ? A MSE 216 A LEU 217 1_555 ? ? ? ? ? ? ? 1.334 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 16 ? PRO A 20 ? LEU A 147 PRO A 151 A 2 VAL A 28 ? PHE A 32 ? VAL A 159 PHE A 163 A 3 CYS A 38 ? VAL A 42 ? CYS A 169 VAL A 173 A 4 ILE A 50 ? HIS A 54 ? ILE A 181 HIS A 185 B 1 VAL B 21 ? ASP B 24 ? VAL B 170 ASP B 173 B 2 GLN B 29 ? ILE B 32 ? GLN B 178 ILE B 181 B 3 ASP B 41 ? PRO B 44 ? ASP B 190 PRO B 193 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 19 ? N LEU A 150 O ARG A 29 ? O ARG A 160 A 2 3 N PHE A 30 ? N PHE A 161 O ILE A 40 ? O ILE A 171 A 3 4 N GLU A 41 ? N GLU A 172 O GLY A 51 ? O GLY A 182 B 1 2 N ILE B 22 ? N ILE B 171 O LEU B 31 ? O LEU B 180 B 2 3 N VAL B 30 ? N VAL B 179 O LEU B 43 ? O LEU B 192 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 7 _struct_site.details 'BINDING SITE FOR RESIDUE PO4 A 222' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 HOH E . ? HOH A 25 . ? 1_555 ? 2 AC1 7 HOH E . ? HOH A 50 . ? 1_555 ? 3 AC1 7 THR A 64 ? THR A 195 . ? 1_555 ? 4 AC1 7 HIS A 67 ? HIS A 198 . ? 1_555 ? 5 AC1 7 HOH F . ? HOH B 40 . ? 12_555 ? 6 AC1 7 ARG B 61 ? ARG B 210 . ? 12_555 ? 7 AC1 7 LYS B 64 ? LYS B 213 . ? 12_555 ? # _database_PDB_matrix.entry_id 2FTX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2FTX _atom_sites.fract_transf_matrix[1][1] 0.011778 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011778 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010730 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 132 132 MSE MSE A . n A 1 2 ASN 2 133 133 ASN ASN A . n A 1 3 ASP 3 134 134 ASP ASP A . n A 1 4 ALA 4 135 135 ALA ALA A . n A 1 5 ALA 5 136 136 ALA ALA A . n A 1 6 GLU 6 137 137 GLU GLU A . n A 1 7 VAL 7 138 138 VAL VAL A . n A 1 8 ALA 8 139 139 ALA ALA A . n A 1 9 LEU 9 140 140 LEU LEU A . n A 1 10 TYR 10 141 141 TYR TYR A . n A 1 11 GLU 11 142 142 GLU GLU A . n A 1 12 ARG 12 143 143 ARG ARG A . n A 1 13 LEU 13 144 144 LEU LEU A . n A 1 14 LEU 14 145 145 LEU LEU A . n A 1 15 GLN 15 146 146 GLN GLN A . n A 1 16 LEU 16 147 147 LEU LEU A . n A 1 17 ARG 17 148 148 ARG ARG A . n A 1 18 VAL 18 149 149 VAL VAL A . n A 1 19 LEU 19 150 150 LEU LEU A . n A 1 20 PRO 20 151 151 PRO PRO A . n A 1 21 GLY 21 152 152 GLY GLY A . n A 1 22 ALA 22 153 153 ALA ALA A . n A 1 23 SER 23 154 154 SER SER A . n A 1 24 ASP 24 155 155 ASP ASP A . n A 1 25 VAL 25 156 156 VAL VAL A . n A 1 26 HIS 26 157 157 HIS HIS A . n A 1 27 ASP 27 158 158 ASP ASP A . n A 1 28 VAL 28 159 159 VAL VAL A . n A 1 29 ARG 29 160 160 ARG ARG A . n A 1 30 PHE 30 161 161 PHE PHE A . n A 1 31 VAL 31 162 162 VAL VAL A . n A 1 32 PHE 32 163 163 PHE PHE A . n A 1 33 GLY 33 164 164 GLY GLY A . n A 1 34 ASP 34 165 165 ASP ASP A . n A 1 35 ASP 35 166 166 ASP ASP A . n A 1 36 SER 36 167 167 SER SER A . n A 1 37 ARG 37 168 168 ARG ARG A . n A 1 38 CYS 38 169 169 CYS CYS A . n A 1 39 TRP 39 170 170 TRP TRP A . n A 1 40 ILE 40 171 171 ILE ILE A . n A 1 41 GLU 41 172 172 GLU GLU A . n A 1 42 VAL 42 173 173 VAL VAL A . n A 1 43 ALA 43 174 174 ALA ALA A . n A 1 44 MSE 44 175 175 MSE MSE A . n A 1 45 HIS 45 176 176 HIS HIS A . n A 1 46 GLY 46 177 177 GLY GLY A . n A 1 47 ASP 47 178 178 ASP ASP A . n A 1 48 HIS 48 179 179 HIS HIS A . n A 1 49 VAL 49 180 180 VAL VAL A . n A 1 50 ILE 50 181 181 ILE ILE A . n A 1 51 GLY 51 182 182 GLY GLY A . n A 1 52 ASN 52 183 183 ASN ASN A . n A 1 53 SER 53 184 184 SER SER A . n A 1 54 HIS 54 185 185 HIS HIS A . n A 1 55 PRO 55 186 186 PRO PRO A . n A 1 56 ALA 56 187 187 ALA ALA A . n A 1 57 LEU 57 188 188 LEU LEU A . n A 1 58 ASP 58 189 189 ASP ASP A . n A 1 59 PRO 59 190 190 PRO PRO A . n A 1 60 LYS 60 191 191 LYS LYS A . n A 1 61 SER 61 192 192 SER SER A . n A 1 62 ARG 62 193 193 ARG ARG A . n A 1 63 ALA 63 194 194 ALA ALA A . n A 1 64 THR 64 195 195 THR THR A . n A 1 65 LEU 65 196 196 LEU LEU A . n A 1 66 GLU 66 197 197 GLU GLU A . n A 1 67 HIS 67 198 198 HIS HIS A . n A 1 68 VAL 68 199 199 VAL VAL A . n A 1 69 LEU 69 200 200 LEU LEU A . n A 1 70 THR 70 201 201 THR THR A . n A 1 71 VAL 71 202 202 VAL VAL A . n A 1 72 GLN 72 203 203 GLN GLN A . n A 1 73 GLY 73 204 204 GLY GLY A . n A 1 74 ASP 74 205 205 ASP ASP A . n A 1 75 LEU 75 206 206 LEU LEU A . n A 1 76 ALA 76 207 207 ALA ALA A . n A 1 77 ALA 77 208 208 ALA ALA A . n A 1 78 PHE 78 209 209 PHE PHE A . n A 1 79 LEU 79 210 210 LEU LEU A . n A 1 80 VAL 80 211 211 VAL VAL A . n A 1 81 VAL 81 212 212 VAL VAL A . n A 1 82 ALA 82 213 213 ALA ALA A . n A 1 83 ARG 83 214 214 ARG ARG A . n A 1 84 ASP 84 215 215 ASP ASP A . n A 1 85 MSE 85 216 216 MSE MSE A . n A 1 86 LEU 86 217 217 LEU LEU A . n A 1 87 LEU 87 218 218 LEU LEU A . n A 1 88 ALA 88 219 219 ALA ALA A . n A 1 89 SER 89 220 220 SER SER A . n A 1 90 LEU 90 221 221 LEU LEU A . n B 2 1 GLY 1 150 ? ? ? B . n B 2 2 SER 2 151 ? ? ? B . n B 2 3 HIS 3 152 ? ? ? B . n B 2 4 MSE 4 153 ? ? ? B . n B 2 5 GLU 5 154 ? ? ? B . n B 2 6 ALA 6 155 155 ALA ALA B . n B 2 7 ASN 7 156 156 ASN ASN B . n B 2 8 GLU 8 157 157 GLU GLU B . n B 2 9 ASN 9 158 158 ASN ASN B . n B 2 10 ILE 10 159 159 ILE ILE B . n B 2 11 LEU 11 160 160 LEU LEU B . n B 2 12 LYS 12 161 161 LYS LYS B . n B 2 13 LEU 13 162 162 LEU LEU B . n B 2 14 LYS 14 163 163 LYS LYS B . n B 2 15 LEU 15 164 164 LEU LEU B . n B 2 16 TYR 16 165 165 TYR TYR B . n B 2 17 ARG 17 166 166 ARG ARG B . n B 2 18 SER 18 167 167 SER SER B . n B 2 19 LEU 19 168 168 LEU LEU B . n B 2 20 GLY 20 169 169 GLY GLY B . n B 2 21 VAL 21 170 170 VAL VAL B . n B 2 22 ILE 22 171 171 ILE ILE B . n B 2 23 LEU 23 172 172 LEU LEU B . n B 2 24 ASP 24 173 173 ASP ASP B . n B 2 25 LEU 25 174 174 LEU LEU B . n B 2 26 GLU 26 175 175 GLU GLU B . n B 2 27 ASN 27 176 176 ASN ASN B . n B 2 28 ASP 28 177 177 ASP ASP B . n B 2 29 GLN 29 178 178 GLN GLN B . n B 2 30 VAL 30 179 179 VAL VAL B . n B 2 31 LEU 31 180 180 LEU LEU B . n B 2 32 ILE 32 181 181 ILE ILE B . n B 2 33 ASN 33 182 182 ASN ASN B . n B 2 34 ARG 34 183 183 ARG ARG B . n B 2 35 LYS 35 184 184 LYS LYS B . n B 2 36 ASN 36 185 185 ASN ASN B . n B 2 37 ASP 37 186 186 ASP ASP B . n B 2 38 GLY 38 187 187 GLY GLY B . n B 2 39 ASN 39 188 188 ASN ASN B . n B 2 40 ILE 40 189 189 ILE ILE B . n B 2 41 ASP 41 190 190 ASP ASP B . n B 2 42 ILE 42 191 191 ILE ILE B . n B 2 43 LEU 43 192 192 LEU LEU B . n B 2 44 PRO 44 193 193 PRO PRO B . n B 2 45 LEU 45 194 194 LEU LEU B . n B 2 46 ASP 46 195 195 ASP ASP B . n B 2 47 ASN 47 196 196 ASN ASN B . n B 2 48 ASN 48 197 197 ASN ASN B . n B 2 49 LEU 49 198 198 LEU LEU B . n B 2 50 SER 50 199 199 SER SER B . n B 2 51 ASP 51 200 200 ASP ASP B . n B 2 52 PHE 52 201 201 PHE PHE B . n B 2 53 TYR 53 202 202 TYR TYR B . n B 2 54 LYS 54 203 203 LYS LYS B . n B 2 55 THR 55 204 204 THR THR B . n B 2 56 LYS 56 205 205 LYS LYS B . n B 2 57 TYR 57 206 206 TYR TYR B . n B 2 58 ILE 58 207 207 ILE ILE B . n B 2 59 TRP 59 208 208 TRP TRP B . n B 2 60 GLU 60 209 209 GLU GLU B . n B 2 61 ARG 61 210 210 ARG ARG B . n B 2 62 LEU 62 211 211 LEU LEU B . n B 2 63 GLY 63 212 212 GLY GLY B . n B 2 64 LYS 64 213 213 LYS LYS B . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 1 A MSE 132 ? MET SELENOMETHIONINE 2 A MSE 44 A MSE 175 ? MET SELENOMETHIONINE 3 A MSE 85 A MSE 216 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2670 ? 1 MORE -36 ? 1 'SSA (A^2)' 8340 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-06-13 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SCALEPACK 'data scaling' . ? 2 SOLVE phasing . ? 3 REFMAC refinement 5.0 ? 4 HKL-2000 'data reduction' . ? 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 195 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 195 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 195 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 124.34 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 6.04 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 166 ? ? -121.24 -166.13 2 1 SER A 167 ? ? -85.21 41.54 3 1 PRO A 186 ? ? -12.76 131.22 4 1 ASP B 195 ? ? -22.98 120.70 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 HIS _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 185 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 PRO _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 186 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -55.88 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B GLY 150 ? B GLY 1 2 1 Y 1 B SER 151 ? B SER 2 3 1 Y 1 B HIS 152 ? B HIS 3 4 1 Y 1 B MSE 153 ? B MSE 4 5 1 Y 1 B GLU 154 ? B GLU 5 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SODIUM ION' NA 4 'PHOSPHATE ION' PO4 5 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NA 1 115 115 NA NA A . D 4 PO4 1 222 1 PO4 PO4 A . E 5 HOH 1 2 2 HOH HOH A . E 5 HOH 2 9 9 HOH HOH A . E 5 HOH 3 10 10 HOH HOH A . E 5 HOH 4 13 13 HOH HOH A . E 5 HOH 5 14 14 HOH HOH A . E 5 HOH 6 15 15 HOH HOH A . E 5 HOH 7 20 20 HOH HOH A . E 5 HOH 8 21 21 HOH HOH A . E 5 HOH 9 24 24 HOH HOH A . E 5 HOH 10 25 25 HOH HOH A . E 5 HOH 11 27 27 HOH HOH A . E 5 HOH 12 28 28 HOH HOH A . E 5 HOH 13 31 31 HOH HOH A . E 5 HOH 14 32 32 HOH HOH A . E 5 HOH 15 33 33 HOH HOH A . E 5 HOH 16 35 35 HOH HOH A . E 5 HOH 17 36 36 HOH HOH A . E 5 HOH 18 38 38 HOH HOH A . E 5 HOH 19 42 42 HOH HOH A . E 5 HOH 20 44 44 HOH HOH A . E 5 HOH 21 47 47 HOH HOH A . E 5 HOH 22 49 49 HOH HOH A . E 5 HOH 23 50 50 HOH HOH A . E 5 HOH 24 51 51 HOH HOH A . E 5 HOH 25 52 52 HOH HOH A . E 5 HOH 26 53 53 HOH HOH A . E 5 HOH 27 55 55 HOH HOH A . E 5 HOH 28 57 57 HOH HOH A . E 5 HOH 29 60 60 HOH HOH A . E 5 HOH 30 61 61 HOH HOH A . E 5 HOH 31 62 62 HOH HOH A . E 5 HOH 32 64 64 HOH HOH A . E 5 HOH 33 65 65 HOH HOH A . E 5 HOH 34 66 66 HOH HOH A . E 5 HOH 35 67 67 HOH HOH A . E 5 HOH 36 68 68 HOH HOH A . E 5 HOH 37 70 70 HOH HOH A . E 5 HOH 38 71 71 HOH HOH A . E 5 HOH 39 72 72 HOH HOH A . E 5 HOH 40 75 75 HOH HOH A . E 5 HOH 41 76 76 HOH HOH A . F 5 HOH 1 1 1 HOH HOH B . F 5 HOH 2 3 3 HOH HOH B . F 5 HOH 3 4 4 HOH HOH B . F 5 HOH 4 5 5 HOH HOH B . F 5 HOH 5 6 6 HOH HOH B . F 5 HOH 6 7 7 HOH HOH B . F 5 HOH 7 8 8 HOH HOH B . F 5 HOH 8 11 11 HOH HOH B . F 5 HOH 9 12 12 HOH HOH B . F 5 HOH 10 16 16 HOH HOH B . F 5 HOH 11 17 17 HOH HOH B . F 5 HOH 12 18 18 HOH HOH B . F 5 HOH 13 19 19 HOH HOH B . F 5 HOH 14 22 22 HOH HOH B . F 5 HOH 15 23 23 HOH HOH B . F 5 HOH 16 26 26 HOH HOH B . F 5 HOH 17 29 29 HOH HOH B . F 5 HOH 18 30 30 HOH HOH B . F 5 HOH 19 34 34 HOH HOH B . F 5 HOH 20 37 37 HOH HOH B . F 5 HOH 21 39 39 HOH HOH B . F 5 HOH 22 40 40 HOH HOH B . F 5 HOH 23 41 41 HOH HOH B . F 5 HOH 24 43 43 HOH HOH B . F 5 HOH 25 45 45 HOH HOH B . F 5 HOH 26 46 46 HOH HOH B . F 5 HOH 27 48 48 HOH HOH B . F 5 HOH 28 54 54 HOH HOH B . F 5 HOH 29 56 56 HOH HOH B . F 5 HOH 30 58 58 HOH HOH B . F 5 HOH 31 59 59 HOH HOH B . F 5 HOH 32 63 63 HOH HOH B . F 5 HOH 33 69 69 HOH HOH B . F 5 HOH 34 73 73 HOH HOH B . F 5 HOH 35 74 74 HOH HOH B . F 5 HOH 36 77 77 HOH HOH B . F 5 HOH 37 78 78 HOH HOH B . F 5 HOH 38 79 79 HOH HOH B . #