data_2FUP # _entry.id 2FUP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2FUP pdb_00002fup 10.2210/pdb2fup/pdb RCSB RCSB036334 ? ? WWPDB D_1000036334 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 359556 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2FUP _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-01-27 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of hypothetical protein (NP_252042.1) from Pseudomonas aeruginosa at 1.48 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 2FUP _cell.length_a 62.531 _cell.length_b 62.531 _cell.length_c 80.241 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.Int_Tables_number 96 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.entry_id 2FUP _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'hypothetical protein PA3352' 17427.201 1 ? ? ? ? 2 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 1 ? ? ? ? 3 water nat water 18.015 110 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)PDSPTLLDLFAEDIGHANQLLQLVDEEFQALERRELPVLQQLLGAKQPL(MSE)QQLERNGRARAEILREAGVS LDREGLARYARERADGAELLARGDELGELLERCQQANLRNGRIIRANQASTGSLLNILRGQDAPSLYDSRGGTASSSRQR PLSQA ; _entity_poly.pdbx_seq_one_letter_code_can ;GMPDSPTLLDLFAEDIGHANQLLQLVDEEFQALERRELPVLQQLLGAKQPLMQQLERNGRARAEILREAGVSLDREGLAR YARERADGAELLARGDELGELLERCQQANLRNGRIIRANQASTGSLLNILRGQDAPSLYDSRGGTASSSRQRPLSQA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 359556 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 PRO n 1 4 ASP n 1 5 SER n 1 6 PRO n 1 7 THR n 1 8 LEU n 1 9 LEU n 1 10 ASP n 1 11 LEU n 1 12 PHE n 1 13 ALA n 1 14 GLU n 1 15 ASP n 1 16 ILE n 1 17 GLY n 1 18 HIS n 1 19 ALA n 1 20 ASN n 1 21 GLN n 1 22 LEU n 1 23 LEU n 1 24 GLN n 1 25 LEU n 1 26 VAL n 1 27 ASP n 1 28 GLU n 1 29 GLU n 1 30 PHE n 1 31 GLN n 1 32 ALA n 1 33 LEU n 1 34 GLU n 1 35 ARG n 1 36 ARG n 1 37 GLU n 1 38 LEU n 1 39 PRO n 1 40 VAL n 1 41 LEU n 1 42 GLN n 1 43 GLN n 1 44 LEU n 1 45 LEU n 1 46 GLY n 1 47 ALA n 1 48 LYS n 1 49 GLN n 1 50 PRO n 1 51 LEU n 1 52 MSE n 1 53 GLN n 1 54 GLN n 1 55 LEU n 1 56 GLU n 1 57 ARG n 1 58 ASN n 1 59 GLY n 1 60 ARG n 1 61 ALA n 1 62 ARG n 1 63 ALA n 1 64 GLU n 1 65 ILE n 1 66 LEU n 1 67 ARG n 1 68 GLU n 1 69 ALA n 1 70 GLY n 1 71 VAL n 1 72 SER n 1 73 LEU n 1 74 ASP n 1 75 ARG n 1 76 GLU n 1 77 GLY n 1 78 LEU n 1 79 ALA n 1 80 ARG n 1 81 TYR n 1 82 ALA n 1 83 ARG n 1 84 GLU n 1 85 ARG n 1 86 ALA n 1 87 ASP n 1 88 GLY n 1 89 ALA n 1 90 GLU n 1 91 LEU n 1 92 LEU n 1 93 ALA n 1 94 ARG n 1 95 GLY n 1 96 ASP n 1 97 GLU n 1 98 LEU n 1 99 GLY n 1 100 GLU n 1 101 LEU n 1 102 LEU n 1 103 GLU n 1 104 ARG n 1 105 CYS n 1 106 GLN n 1 107 GLN n 1 108 ALA n 1 109 ASN n 1 110 LEU n 1 111 ARG n 1 112 ASN n 1 113 GLY n 1 114 ARG n 1 115 ILE n 1 116 ILE n 1 117 ARG n 1 118 ALA n 1 119 ASN n 1 120 GLN n 1 121 ALA n 1 122 SER n 1 123 THR n 1 124 GLY n 1 125 SER n 1 126 LEU n 1 127 LEU n 1 128 ASN n 1 129 ILE n 1 130 LEU n 1 131 ARG n 1 132 GLY n 1 133 GLN n 1 134 ASP n 1 135 ALA n 1 136 PRO n 1 137 SER n 1 138 LEU n 1 139 TYR n 1 140 ASP n 1 141 SER n 1 142 ARG n 1 143 GLY n 1 144 GLY n 1 145 THR n 1 146 ALA n 1 147 SER n 1 148 SER n 1 149 SER n 1 150 ARG n 1 151 GLN n 1 152 ARG n 1 153 PRO n 1 154 LEU n 1 155 SER n 1 156 GLN n 1 157 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Pseudomonas _entity_src_gen.pdbx_gene_src_gene np_252042.1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas aeruginosa' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code NP_252042 _struct_ref.pdbx_db_accession 15598548 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MPDSPTLLDLFAEDIGHANQLLQLVDEEFQALERRELPVLQQLLGAKQPLMQQLERNGRARAEILREAGVSLDREGLARY ARERADGAELLARGDELGELLERCQQANLRNGRIIRANQASTGSLLNILRGQDAPSLYDSRGGTASSSRQRPLSQA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2FUP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 157 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 15598548 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 156 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 156 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2FUP GLY A 1 ? GB 15598548 ? ? 'expression tag' 0 1 1 2FUP MSE A 2 ? GB 15598548 MET 1 'modified residue' 1 2 1 2FUP MSE A 52 ? GB 15598548 MET 51 'modified residue' 51 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2FUP # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 45.324837 _exptl_crystal.density_Matthews 2.249650 _exptl_crystal.description ? _exptl_crystal.density_meas ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP, NANODROP' _exptl_crystal_grow.pH 4.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '20.0% MPD, 0.1M Citrate, pH 4.0, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.details ? _diffrn_detector.pdbx_collection_date 2005-12-15 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double Crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9797 1.0 2 0.9999 1.0 3 0.9795 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9797, 0.9999, 0.9795' _diffrn_source.pdbx_synchrotron_site ALS # _reflns.entry_id 2FUP _reflns.d_resolution_low 29.74 _reflns.d_resolution_high 1.48 _reflns.number_obs 27261 _reflns.percent_possible_obs 100.000 _reflns.pdbx_Rmerge_I_obs 0.081 _reflns.pdbx_chi_squared ? _reflns.pdbx_redundancy 6.800 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_netI_over_sigmaI 5.800 _reflns.pdbx_Rsym_value 0.081 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_low _reflns_shell.d_res_high _reflns_shell.number_measured_obs _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.number_unique_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.56 1.48 3850 100.000 0.764 ? 5.200 ? 1.000 0.764 ? ? ? 1 1 1.65 1.56 3705 100.000 0.517 ? 7.100 ? 1.400 0.517 ? ? ? 2 1 1.77 1.65 3487 100.000 0.338 ? 7.200 ? 2.200 0.338 ? ? ? 3 1 1.91 1.77 3261 100.000 0.218 ? 7.200 ? 3.400 0.218 ? ? ? 4 1 2.09 1.91 3029 100.000 0.123 ? 7.200 ? 5.900 0.123 ? ? ? 5 1 2.34 2.09 2735 100.000 0.076 ? 7.200 ? 8.700 0.076 ? ? ? 6 1 2.70 2.34 2443 100.000 0.066 ? 7.100 ? 9.500 0.066 ? ? ? 7 1 3.31 2.70 2099 100.000 0.061 ? 7.000 ? 9.400 0.061 ? ? ? 8 1 4.68 3.31 1657 100.000 0.048 ? 6.900 ? 10.800 0.048 ? ? ? 9 1 29.74 4.68 995 99.700 0.038 ? 6.300 ? 12.600 0.038 ? ? ? 10 1 # _refine.ls_d_res_high 1.480 _refine.ls_d_res_low 29.71 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.940 _refine.ls_number_reflns_obs 27190 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. RESIDUES 115-116 WERE DISORDERED AND NOT INCLUDED IN THE MODEL. 4. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. ; _refine.ls_R_factor_obs 0.19 _refine.ls_R_factor_R_work 0.188 _refine.ls_R_factor_R_free 0.218 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1361 _refine.B_iso_mean 22.417 _refine.aniso_B[1][1] -0.510 _refine.aniso_B[2][2] -0.510 _refine.aniso_B[3][3] 1.010 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.958 _refine.correlation_coeff_Fo_to_Fc_free 0.937 _refine.pdbx_overall_ESU_R 0.065 _refine.pdbx_overall_ESU_R_Free 0.068 _refine.overall_SU_ML 0.045 _refine.overall_SU_B 2.390 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.entry_id 2FUP _refine.ls_R_factor_all ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 974 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 110 _refine_hist.number_atoms_total 1092 _refine_hist.d_res_high 1.480 _refine_hist.d_res_low 29.71 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1018 0.018 0.021 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 971 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1372 1.713 2.001 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2245 0.923 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 130 4.246 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 56 37.347 24.821 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 189 11.360 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 12 16.991 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 154 0.099 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1150 0.008 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 190 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 270 0.247 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1008 0.187 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 514 0.178 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 626 0.084 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 81 0.175 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 11 0.256 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 58 0.257 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 9 0.240 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 664 2.458 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 266 0.552 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1008 3.115 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 384 5.352 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 362 8.118 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.480 _refine_ls_shell.d_res_low 1.518 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.650 _refine_ls_shell.number_reflns_R_work 1871 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.279 _refine_ls_shell.R_factor_R_free 0.3 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 105 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1976 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2FUP _struct.title 'Crystal structure of a putative flagella synthesis protein flgn (pa3352) from pseudomonas aeruginosa at 1.48 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'Structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, biosynthetic protein' _struct_keywords.pdbx_keywords 'BIOSYNTHETIC PROTEIN' _struct_keywords.entry_id 2FUP # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 6 ? ARG A 35 ? PRO A 5 ARG A 34 1 ? 30 HELX_P HELX_P2 2 LEU A 38 ? ALA A 69 ? LEU A 37 ALA A 68 1 ? 32 HELX_P HELX_P3 3 ASP A 74 ? ARG A 83 ? ASP A 73 ARG A 82 1 ? 10 HELX_P HELX_P4 4 ASP A 87 ? ILE A 115 ? ASP A 86 ILE A 114 1 ? 29 HELX_P HELX_P5 5 GLN A 120 ? ARG A 131 ? GLN A 119 ARG A 130 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 2 C ? ? ? 1_555 A PRO 3 N ? ? A MSE 1 A PRO 2 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale2 covale both ? A LEU 51 C ? ? ? 1_555 A MSE 52 N ? ? A LEU 50 A MSE 51 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale3 covale both ? A MSE 52 C ? ? ? 1_555 A GLN 53 N ? ? A MSE 51 A GLN 52 1_555 ? ? ? ? ? ? ? 1.321 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id MPD _struct_site.pdbx_auth_seq_id 157 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE MPD A 157' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 PHE A 12 ? PHE A 11 . ? 1_555 ? 2 AC1 5 GLU A 68 ? GLU A 67 . ? 3_654 ? 3 AC1 5 ASP A 74 ? ASP A 73 . ? 1_555 ? 4 AC1 5 GLY A 95 ? GLY A 94 . ? 1_555 ? 5 AC1 5 HOH C . ? HOH A 218 . ? 1_555 ? # _database_PDB_matrix.entry_id 2FUP _database_PDB_matrix.origx[1][1] 1.00000 _database_PDB_matrix.origx[1][2] 0.00000 _database_PDB_matrix.origx[1][3] 0.00000 _database_PDB_matrix.origx[2][1] 0.00000 _database_PDB_matrix.origx[2][2] 1.00000 _database_PDB_matrix.origx[2][3] 0.00000 _database_PDB_matrix.origx[3][1] 0.00000 _database_PDB_matrix.origx[3][2] 0.00000 _database_PDB_matrix.origx[3][3] 1.00000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2FUP _atom_sites.fract_transf_matrix[1][1] 0.015992 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015992 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012462 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 PRO 3 2 2 PRO PRO A . n A 1 4 ASP 4 3 3 ASP ASP A . n A 1 5 SER 5 4 4 SER SER A . n A 1 6 PRO 6 5 5 PRO PRO A . n A 1 7 THR 7 6 6 THR THR A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 LEU 9 8 8 LEU LEU A . n A 1 10 ASP 10 9 9 ASP ASP A . n A 1 11 LEU 11 10 10 LEU LEU A . n A 1 12 PHE 12 11 11 PHE PHE A . n A 1 13 ALA 13 12 12 ALA ALA A . n A 1 14 GLU 14 13 13 GLU GLU A . n A 1 15 ASP 15 14 14 ASP ASP A . n A 1 16 ILE 16 15 15 ILE ILE A . n A 1 17 GLY 17 16 16 GLY GLY A . n A 1 18 HIS 18 17 17 HIS HIS A . n A 1 19 ALA 19 18 18 ALA ALA A . n A 1 20 ASN 20 19 19 ASN ASN A . n A 1 21 GLN 21 20 20 GLN GLN A . n A 1 22 LEU 22 21 21 LEU LEU A . n A 1 23 LEU 23 22 22 LEU LEU A . n A 1 24 GLN 24 23 23 GLN GLN A . n A 1 25 LEU 25 24 24 LEU LEU A . n A 1 26 VAL 26 25 25 VAL VAL A . n A 1 27 ASP 27 26 26 ASP ASP A . n A 1 28 GLU 28 27 27 GLU GLU A . n A 1 29 GLU 29 28 28 GLU GLU A . n A 1 30 PHE 30 29 29 PHE PHE A . n A 1 31 GLN 31 30 30 GLN GLN A . n A 1 32 ALA 32 31 31 ALA ALA A . n A 1 33 LEU 33 32 32 LEU LEU A . n A 1 34 GLU 34 33 33 GLU GLU A . n A 1 35 ARG 35 34 34 ARG ARG A . n A 1 36 ARG 36 35 35 ARG ARG A . n A 1 37 GLU 37 36 36 GLU GLU A . n A 1 38 LEU 38 37 37 LEU LEU A . n A 1 39 PRO 39 38 38 PRO PRO A . n A 1 40 VAL 40 39 39 VAL VAL A . n A 1 41 LEU 41 40 40 LEU LEU A . n A 1 42 GLN 42 41 41 GLN GLN A . n A 1 43 GLN 43 42 42 GLN GLN A . n A 1 44 LEU 44 43 43 LEU LEU A . n A 1 45 LEU 45 44 44 LEU LEU A . n A 1 46 GLY 46 45 45 GLY GLY A . n A 1 47 ALA 47 46 46 ALA ALA A . n A 1 48 LYS 48 47 47 LYS LYS A . n A 1 49 GLN 49 48 48 GLN GLN A . n A 1 50 PRO 50 49 49 PRO PRO A . n A 1 51 LEU 51 50 50 LEU LEU A . n A 1 52 MSE 52 51 51 MSE MSE A . n A 1 53 GLN 53 52 52 GLN GLN A . n A 1 54 GLN 54 53 53 GLN GLN A . n A 1 55 LEU 55 54 54 LEU LEU A . n A 1 56 GLU 56 55 55 GLU GLU A . n A 1 57 ARG 57 56 56 ARG ARG A . n A 1 58 ASN 58 57 57 ASN ASN A . n A 1 59 GLY 59 58 58 GLY GLY A . n A 1 60 ARG 60 59 59 ARG ARG A . n A 1 61 ALA 61 60 60 ALA ALA A . n A 1 62 ARG 62 61 61 ARG ARG A . n A 1 63 ALA 63 62 62 ALA ALA A . n A 1 64 GLU 64 63 63 GLU GLU A . n A 1 65 ILE 65 64 64 ILE ILE A . n A 1 66 LEU 66 65 65 LEU LEU A . n A 1 67 ARG 67 66 66 ARG ARG A . n A 1 68 GLU 68 67 67 GLU GLU A . n A 1 69 ALA 69 68 68 ALA ALA A . n A 1 70 GLY 70 69 69 GLY GLY A . n A 1 71 VAL 71 70 70 VAL VAL A . n A 1 72 SER 72 71 71 SER SER A . n A 1 73 LEU 73 72 72 LEU LEU A . n A 1 74 ASP 74 73 73 ASP ASP A . n A 1 75 ARG 75 74 74 ARG ARG A . n A 1 76 GLU 76 75 75 GLU GLU A . n A 1 77 GLY 77 76 76 GLY GLY A . n A 1 78 LEU 78 77 77 LEU LEU A . n A 1 79 ALA 79 78 78 ALA ALA A . n A 1 80 ARG 80 79 79 ARG ARG A . n A 1 81 TYR 81 80 80 TYR TYR A . n A 1 82 ALA 82 81 81 ALA ALA A . n A 1 83 ARG 83 82 82 ARG ARG A . n A 1 84 GLU 84 83 83 GLU GLU A . n A 1 85 ARG 85 84 84 ARG ARG A . n A 1 86 ALA 86 85 85 ALA ALA A . n A 1 87 ASP 87 86 86 ASP ASP A . n A 1 88 GLY 88 87 87 GLY GLY A . n A 1 89 ALA 89 88 88 ALA ALA A . n A 1 90 GLU 90 89 89 GLU GLU A . n A 1 91 LEU 91 90 90 LEU LEU A . n A 1 92 LEU 92 91 91 LEU LEU A . n A 1 93 ALA 93 92 92 ALA ALA A . n A 1 94 ARG 94 93 93 ARG ARG A . n A 1 95 GLY 95 94 94 GLY GLY A . n A 1 96 ASP 96 95 95 ASP ASP A . n A 1 97 GLU 97 96 96 GLU GLU A . n A 1 98 LEU 98 97 97 LEU LEU A . n A 1 99 GLY 99 98 98 GLY GLY A . n A 1 100 GLU 100 99 99 GLU GLU A . n A 1 101 LEU 101 100 100 LEU LEU A . n A 1 102 LEU 102 101 101 LEU LEU A . n A 1 103 GLU 103 102 102 GLU GLU A . n A 1 104 ARG 104 103 103 ARG ARG A . n A 1 105 CYS 105 104 104 CYS CYS A . n A 1 106 GLN 106 105 105 GLN GLN A . n A 1 107 GLN 107 106 106 GLN GLN A . n A 1 108 ALA 108 107 107 ALA ALA A . n A 1 109 ASN 109 108 108 ASN ASN A . n A 1 110 LEU 110 109 109 LEU LEU A . n A 1 111 ARG 111 110 110 ARG ARG A . n A 1 112 ASN 112 111 111 ASN ASN A . n A 1 113 GLY 113 112 112 GLY GLY A . n A 1 114 ARG 114 113 113 ARG ARG A . n A 1 115 ILE 115 114 114 ILE ILE A . n A 1 116 ILE 116 115 ? ? ? A . n A 1 117 ARG 117 116 ? ? ? A . n A 1 118 ALA 118 117 117 ALA ALA A . n A 1 119 ASN 119 118 118 ASN ASN A . n A 1 120 GLN 120 119 119 GLN GLN A . n A 1 121 ALA 121 120 120 ALA ALA A . n A 1 122 SER 122 121 121 SER SER A . n A 1 123 THR 123 122 122 THR THR A . n A 1 124 GLY 124 123 123 GLY GLY A . n A 1 125 SER 125 124 124 SER SER A . n A 1 126 LEU 126 125 125 LEU LEU A . n A 1 127 LEU 127 126 126 LEU LEU A . n A 1 128 ASN 128 127 127 ASN ASN A . n A 1 129 ILE 129 128 128 ILE ILE A . n A 1 130 LEU 130 129 129 LEU LEU A . n A 1 131 ARG 131 130 130 ARG ARG A . n A 1 132 GLY 132 131 ? ? ? A . n A 1 133 GLN 133 132 ? ? ? A . n A 1 134 ASP 134 133 ? ? ? A . n A 1 135 ALA 135 134 ? ? ? A . n A 1 136 PRO 136 135 ? ? ? A . n A 1 137 SER 137 136 ? ? ? A . n A 1 138 LEU 138 137 ? ? ? A . n A 1 139 TYR 139 138 ? ? ? A . n A 1 140 ASP 140 139 ? ? ? A . n A 1 141 SER 141 140 ? ? ? A . n A 1 142 ARG 142 141 ? ? ? A . n A 1 143 GLY 143 142 ? ? ? A . n A 1 144 GLY 144 143 ? ? ? A . n A 1 145 THR 145 144 ? ? ? A . n A 1 146 ALA 146 145 ? ? ? A . n A 1 147 SER 147 146 ? ? ? A . n A 1 148 SER 148 147 ? ? ? A . n A 1 149 SER 149 148 ? ? ? A . n A 1 150 ARG 150 149 ? ? ? A . n A 1 151 GLN 151 150 ? ? ? A . n A 1 152 ARG 152 151 ? ? ? A . n A 1 153 PRO 153 152 ? ? ? A . n A 1 154 LEU 154 153 ? ? ? A . n A 1 155 SER 155 154 ? ? ? A . n A 1 156 GLN 156 155 ? ? ? A . n A 1 157 ALA 157 156 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MPD 1 157 1 MPD MPD A . C 3 HOH 1 158 2 HOH HOH A . C 3 HOH 2 159 3 HOH HOH A . C 3 HOH 3 160 4 HOH HOH A . C 3 HOH 4 161 5 HOH HOH A . C 3 HOH 5 162 6 HOH HOH A . C 3 HOH 6 163 7 HOH HOH A . C 3 HOH 7 164 8 HOH HOH A . C 3 HOH 8 165 9 HOH HOH A . C 3 HOH 9 166 10 HOH HOH A . C 3 HOH 10 167 11 HOH HOH A . C 3 HOH 11 168 12 HOH HOH A . C 3 HOH 12 169 13 HOH HOH A . C 3 HOH 13 170 14 HOH HOH A . C 3 HOH 14 171 15 HOH HOH A . C 3 HOH 15 172 16 HOH HOH A . C 3 HOH 16 173 17 HOH HOH A . C 3 HOH 17 174 18 HOH HOH A . C 3 HOH 18 175 19 HOH HOH A . C 3 HOH 19 176 20 HOH HOH A . C 3 HOH 20 177 21 HOH HOH A . C 3 HOH 21 178 22 HOH HOH A . C 3 HOH 22 179 23 HOH HOH A . C 3 HOH 23 180 24 HOH HOH A . C 3 HOH 24 181 25 HOH HOH A . C 3 HOH 25 182 26 HOH HOH A . C 3 HOH 26 183 27 HOH HOH A . C 3 HOH 27 184 28 HOH HOH A . C 3 HOH 28 185 29 HOH HOH A . C 3 HOH 29 186 30 HOH HOH A . C 3 HOH 30 187 31 HOH HOH A . C 3 HOH 31 188 32 HOH HOH A . C 3 HOH 32 189 33 HOH HOH A . C 3 HOH 33 190 34 HOH HOH A . C 3 HOH 34 191 35 HOH HOH A . C 3 HOH 35 192 36 HOH HOH A . C 3 HOH 36 193 37 HOH HOH A . C 3 HOH 37 194 38 HOH HOH A . C 3 HOH 38 195 39 HOH HOH A . C 3 HOH 39 196 40 HOH HOH A . C 3 HOH 40 197 41 HOH HOH A . C 3 HOH 41 198 42 HOH HOH A . C 3 HOH 42 199 43 HOH HOH A . C 3 HOH 43 200 44 HOH HOH A . C 3 HOH 44 201 45 HOH HOH A . C 3 HOH 45 202 46 HOH HOH A . C 3 HOH 46 203 47 HOH HOH A . C 3 HOH 47 204 48 HOH HOH A . C 3 HOH 48 205 49 HOH HOH A . C 3 HOH 49 206 50 HOH HOH A . C 3 HOH 50 207 51 HOH HOH A . C 3 HOH 51 208 52 HOH HOH A . C 3 HOH 52 209 53 HOH HOH A . C 3 HOH 53 210 54 HOH HOH A . C 3 HOH 54 211 55 HOH HOH A . C 3 HOH 55 212 56 HOH HOH A . C 3 HOH 56 213 57 HOH HOH A . C 3 HOH 57 214 58 HOH HOH A . C 3 HOH 58 215 59 HOH HOH A . C 3 HOH 59 216 60 HOH HOH A . C 3 HOH 60 217 61 HOH HOH A . C 3 HOH 61 218 62 HOH HOH A . C 3 HOH 62 219 63 HOH HOH A . C 3 HOH 63 220 64 HOH HOH A . C 3 HOH 64 221 65 HOH HOH A . C 3 HOH 65 222 66 HOH HOH A . C 3 HOH 66 223 67 HOH HOH A . C 3 HOH 67 224 68 HOH HOH A . C 3 HOH 68 225 69 HOH HOH A . C 3 HOH 69 226 70 HOH HOH A . C 3 HOH 70 227 71 HOH HOH A . C 3 HOH 71 228 72 HOH HOH A . C 3 HOH 72 229 73 HOH HOH A . C 3 HOH 73 230 74 HOH HOH A . C 3 HOH 74 231 75 HOH HOH A . C 3 HOH 75 232 76 HOH HOH A . C 3 HOH 76 233 77 HOH HOH A . C 3 HOH 77 234 78 HOH HOH A . C 3 HOH 78 235 79 HOH HOH A . C 3 HOH 79 236 80 HOH HOH A . C 3 HOH 80 237 81 HOH HOH A . C 3 HOH 81 238 82 HOH HOH A . C 3 HOH 82 239 83 HOH HOH A . C 3 HOH 83 240 84 HOH HOH A . C 3 HOH 84 241 85 HOH HOH A . C 3 HOH 85 242 86 HOH HOH A . C 3 HOH 86 243 87 HOH HOH A . C 3 HOH 87 244 88 HOH HOH A . C 3 HOH 88 245 89 HOH HOH A . C 3 HOH 89 246 90 HOH HOH A . C 3 HOH 90 247 91 HOH HOH A . C 3 HOH 91 248 92 HOH HOH A . C 3 HOH 92 249 93 HOH HOH A . C 3 HOH 93 250 94 HOH HOH A . C 3 HOH 94 251 95 HOH HOH A . C 3 HOH 95 252 96 HOH HOH A . C 3 HOH 96 253 97 HOH HOH A . C 3 HOH 97 254 98 HOH HOH A . C 3 HOH 98 255 99 HOH HOH A . C 3 HOH 99 256 100 HOH HOH A . C 3 HOH 100 257 101 HOH HOH A . C 3 HOH 101 258 102 HOH HOH A . C 3 HOH 102 259 103 HOH HOH A . C 3 HOH 103 260 104 HOH HOH A . C 3 HOH 104 261 105 HOH HOH A . C 3 HOH 105 262 106 HOH HOH A . C 3 HOH 106 263 107 HOH HOH A . C 3 HOH 107 264 108 HOH HOH A . C 3 HOH 108 265 109 HOH HOH A . C 3 HOH 109 266 110 HOH HOH A . C 3 HOH 110 267 111 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 52 A MSE 51 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-02-28 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_ref_seq_dif 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 37.8790 _pdbx_refine_tls.origin_y 52.1200 _pdbx_refine_tls.origin_z 28.2180 _pdbx_refine_tls.T[1][1] -0.0593 _pdbx_refine_tls.T[2][2] -0.0807 _pdbx_refine_tls.T[3][3] -0.1362 _pdbx_refine_tls.T[1][2] -0.0069 _pdbx_refine_tls.T[1][3] 0.0041 _pdbx_refine_tls.T[2][3] 0.0008 _pdbx_refine_tls.L[1][1] 0.9437 _pdbx_refine_tls.L[2][2] 1.2366 _pdbx_refine_tls.L[3][3] 0.5634 _pdbx_refine_tls.L[1][2] -0.8921 _pdbx_refine_tls.L[1][3] -0.0404 _pdbx_refine_tls.L[2][3] 0.2283 _pdbx_refine_tls.S[1][1] 0.0088 _pdbx_refine_tls.S[2][2] -0.0655 _pdbx_refine_tls.S[3][3] 0.0567 _pdbx_refine_tls.S[1][2] 0.0807 _pdbx_refine_tls.S[1][3] -0.1659 _pdbx_refine_tls.S[2][3] 0.2043 _pdbx_refine_tls.S[2][1] 0.0089 _pdbx_refine_tls.S[3][1] 0.0884 _pdbx_refine_tls.S[3][2] -0.0151 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 2 A 115 ALL A 1 A 114 'X-RAY DIFFRACTION' ? 2 1 A 118 A 131 ALL A 117 A 130 'X-RAY DIFFRACTION' ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0005 ? ? 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 1 SCALA . ? ? 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/INDEX.html Fortran ? 2 PDB_EXTRACT 1.601 'Jan. 30, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 3 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 4 CCP4 '(SCALA)' ? ? ? ? 'data scaling' ? ? ? 5 SHARP . ? ? ? ? phasing ? ? ? 6 # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 300 ;BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 1 CHAIN(S). SEE REMARK 350 FOR INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A MONOMER AS A BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE. ; 999 ;SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OE2 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 GLU _pdbx_validate_symm_contact.auth_seq_id_1 36 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 223 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 5_645 _pdbx_validate_symm_contact.dist 2.15 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CD _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 89 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OE2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 89 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.178 _pdbx_validate_rmsd_bond.bond_target_value 1.252 _pdbx_validate_rmsd_bond.bond_deviation -0.074 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.011 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 93 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 93 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 93 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.52 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.22 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 3 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -146.10 _pdbx_validate_torsion.psi 32.15 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MSE 1 ? SE ? A MSE 2 SE 2 1 Y 1 A MSE 1 ? CE ? A MSE 2 CE 3 1 Y 1 A ARG 35 ? CD ? A ARG 36 CD 4 1 Y 1 A ARG 35 ? NE ? A ARG 36 NE 5 1 Y 1 A ARG 35 ? CZ ? A ARG 36 CZ 6 1 Y 1 A ARG 35 ? NH1 ? A ARG 36 NH1 7 1 Y 1 A ARG 35 ? NH2 ? A ARG 36 NH2 8 1 Y 1 A LEU 37 ? CD1 ? A LEU 38 CD1 9 1 Y 1 A LEU 37 ? CD2 ? A LEU 38 CD2 10 1 Y 1 A GLN 52 ? CG ? A GLN 53 CG 11 1 Y 1 A GLN 52 ? CD ? A GLN 53 CD 12 1 Y 1 A GLN 52 ? OE1 ? A GLN 53 OE1 13 1 Y 1 A GLN 52 ? NE2 ? A GLN 53 NE2 14 1 Y 1 A ARG 82 ? CZ ? A ARG 83 CZ 15 1 Y 1 A ARG 82 ? NH1 ? A ARG 83 NH1 16 1 Y 1 A ARG 82 ? NH2 ? A ARG 83 NH2 17 1 Y 1 A GLU 83 ? OE1 ? A GLU 84 OE1 18 1 Y 1 A GLU 83 ? OE2 ? A GLU 84 OE2 19 1 Y 1 A ARG 113 ? CD ? A ARG 114 CD 20 1 Y 1 A ARG 113 ? NE ? A ARG 114 NE 21 1 Y 1 A ARG 113 ? CZ ? A ARG 114 CZ 22 1 Y 1 A ARG 113 ? NH1 ? A ARG 114 NH1 23 1 Y 1 A ARG 113 ? NH2 ? A ARG 114 NH2 24 1 Y 1 A THR 122 ? CB ? A THR 123 CB 25 1 Y 1 A THR 122 ? OG1 ? A THR 123 OG1 26 1 Y 1 A THR 122 ? CG2 ? A THR 123 CG2 27 1 Y 1 A ARG 130 ? CZ ? A ARG 131 CZ 28 1 Y 1 A ARG 130 ? NH1 ? A ARG 131 NH1 29 1 Y 1 A ARG 130 ? NH2 ? A ARG 131 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A ILE 115 ? A ILE 116 3 1 Y 1 A ARG 116 ? A ARG 117 4 1 Y 1 A GLY 131 ? A GLY 132 5 1 Y 1 A GLN 132 ? A GLN 133 6 1 Y 1 A ASP 133 ? A ASP 134 7 1 Y 1 A ALA 134 ? A ALA 135 8 1 Y 1 A PRO 135 ? A PRO 136 9 1 Y 1 A SER 136 ? A SER 137 10 1 Y 1 A LEU 137 ? A LEU 138 11 1 Y 1 A TYR 138 ? A TYR 139 12 1 Y 1 A ASP 139 ? A ASP 140 13 1 Y 1 A SER 140 ? A SER 141 14 1 Y 1 A ARG 141 ? A ARG 142 15 1 Y 1 A GLY 142 ? A GLY 143 16 1 Y 1 A GLY 143 ? A GLY 144 17 1 Y 1 A THR 144 ? A THR 145 18 1 Y 1 A ALA 145 ? A ALA 146 19 1 Y 1 A SER 146 ? A SER 147 20 1 Y 1 A SER 147 ? A SER 148 21 1 Y 1 A SER 148 ? A SER 149 22 1 Y 1 A ARG 149 ? A ARG 150 23 1 Y 1 A GLN 150 ? A GLN 151 24 1 Y 1 A ARG 151 ? A ARG 152 25 1 Y 1 A PRO 152 ? A PRO 153 26 1 Y 1 A LEU 153 ? A LEU 154 27 1 Y 1 A SER 154 ? A SER 155 28 1 Y 1 A GLN 155 ? A GLN 156 29 1 Y 1 A ALA 156 ? A ALA 157 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 3 water HOH #