data_2FVS # _entry.id 2FVS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2FVS pdb_00002fvs 10.2210/pdb2fvs/pdb NDB PD0784 ? ? RCSB RCSB036371 ? ? WWPDB D_1000036371 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2FVP . unspecified PDB 2FVQ . unspecified PDB 2FVR . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2FVS _pdbx_database_status.recvd_initial_deposition_date 2006-01-31 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Montano, S.P.' 1 'Cote, M.L.' 2 'Roth, M.J.' 3 'Georgiadis, M.M.' 4 # _citation.id primary _citation.title 'Crystal structures of oligonucleotides including the integrase processing site of the Moloney murine leukemia virus.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 34 _citation.page_first 5353 _citation.page_last 5360 _citation.year 2006 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17003051 _citation.pdbx_database_id_DOI 10.1093/nar/gkl693 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Montano, S.P.' 1 ? primary 'Cote, M.L.' 2 ? primary 'Roth, M.J.' 3 ? primary 'Georgiadis, M.M.' 4 ? # _cell.entry_id 2FVS _cell.length_a 54.238 _cell.length_b 145.680 _cell.length_c 46.943 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2FVS _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*AP*CP*AP*AP*TP*GP*AP*TP*CP*AP*TP*TP*GP*TP*G)-3'" 4897.204 1 ? ? ? ? 2 polymer man 'reverse transcriptase' 28934.287 1 2.7.7.49 ? ? ? 3 water nat water 18.015 86 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name RT # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DA)(DC)(DA)(DA)(DT)(DG)(DA)(DT)(DC)(DA)(DT)(DT)(DG)(DT)(DG)' CACAATGATCATTGTG B ? 2 'polypeptide(L)' no no ;TWLSDFPQAWAETGGMGLAVRQAPLIIPLKATSTPVSIKQYPMSQEARLGIKPHIQRLLDQGILVPCQSPWNTPLLPVKK PGTNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPEMGISGQL TWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAATSELDCQQGTRALLQTLGNLGYRASAKKAQICQ KQVKYLGYLLKEGQR ; ;TWLSDFPQAWAETGGMGLAVRQAPLIIPLKATSTPVSIKQYPMSQEARLGIKPHIQRLLDQGILVPCQSPWNTPLLPVKK PGTNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPEMGISGQL TWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAATSELDCQQGTRALLQTLGNLGYRASAKKAQICQ KQVKYLGYLLKEGQR ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DA n 1 3 DC n 1 4 DA n 1 5 DA n 1 6 DT n 1 7 DG n 1 8 DA n 1 9 DT n 1 10 DC n 1 11 DA n 1 12 DT n 1 13 DT n 1 14 DG n 1 15 DT n 1 16 DG n 2 1 THR n 2 2 TRP n 2 3 LEU n 2 4 SER n 2 5 ASP n 2 6 PHE n 2 7 PRO n 2 8 GLN n 2 9 ALA n 2 10 TRP n 2 11 ALA n 2 12 GLU n 2 13 THR n 2 14 GLY n 2 15 GLY n 2 16 MET n 2 17 GLY n 2 18 LEU n 2 19 ALA n 2 20 VAL n 2 21 ARG n 2 22 GLN n 2 23 ALA n 2 24 PRO n 2 25 LEU n 2 26 ILE n 2 27 ILE n 2 28 PRO n 2 29 LEU n 2 30 LYS n 2 31 ALA n 2 32 THR n 2 33 SER n 2 34 THR n 2 35 PRO n 2 36 VAL n 2 37 SER n 2 38 ILE n 2 39 LYS n 2 40 GLN n 2 41 TYR n 2 42 PRO n 2 43 MET n 2 44 SER n 2 45 GLN n 2 46 GLU n 2 47 ALA n 2 48 ARG n 2 49 LEU n 2 50 GLY n 2 51 ILE n 2 52 LYS n 2 53 PRO n 2 54 HIS n 2 55 ILE n 2 56 GLN n 2 57 ARG n 2 58 LEU n 2 59 LEU n 2 60 ASP n 2 61 GLN n 2 62 GLY n 2 63 ILE n 2 64 LEU n 2 65 VAL n 2 66 PRO n 2 67 CYS n 2 68 GLN n 2 69 SER n 2 70 PRO n 2 71 TRP n 2 72 ASN n 2 73 THR n 2 74 PRO n 2 75 LEU n 2 76 LEU n 2 77 PRO n 2 78 VAL n 2 79 LYS n 2 80 LYS n 2 81 PRO n 2 82 GLY n 2 83 THR n 2 84 ASN n 2 85 ASP n 2 86 TYR n 2 87 ARG n 2 88 PRO n 2 89 VAL n 2 90 GLN n 2 91 ASP n 2 92 LEU n 2 93 ARG n 2 94 GLU n 2 95 VAL n 2 96 ASN n 2 97 LYS n 2 98 ARG n 2 99 VAL n 2 100 GLU n 2 101 ASP n 2 102 ILE n 2 103 HIS n 2 104 PRO n 2 105 THR n 2 106 VAL n 2 107 PRO n 2 108 ASN n 2 109 PRO n 2 110 TYR n 2 111 ASN n 2 112 LEU n 2 113 LEU n 2 114 SER n 2 115 GLY n 2 116 LEU n 2 117 PRO n 2 118 PRO n 2 119 SER n 2 120 HIS n 2 121 GLN n 2 122 TRP n 2 123 TYR n 2 124 THR n 2 125 VAL n 2 126 LEU n 2 127 ASP n 2 128 LEU n 2 129 LYS n 2 130 ASP n 2 131 ALA n 2 132 PHE n 2 133 PHE n 2 134 CYS n 2 135 LEU n 2 136 ARG n 2 137 LEU n 2 138 HIS n 2 139 PRO n 2 140 THR n 2 141 SER n 2 142 GLN n 2 143 PRO n 2 144 LEU n 2 145 PHE n 2 146 ALA n 2 147 PHE n 2 148 GLU n 2 149 TRP n 2 150 ARG n 2 151 ASP n 2 152 PRO n 2 153 GLU n 2 154 MET n 2 155 GLY n 2 156 ILE n 2 157 SER n 2 158 GLY n 2 159 GLN n 2 160 LEU n 2 161 THR n 2 162 TRP n 2 163 THR n 2 164 ARG n 2 165 LEU n 2 166 PRO n 2 167 GLN n 2 168 GLY n 2 169 PHE n 2 170 LYS n 2 171 ASN n 2 172 SER n 2 173 PRO n 2 174 THR n 2 175 LEU n 2 176 PHE n 2 177 ASP n 2 178 GLU n 2 179 ALA n 2 180 LEU n 2 181 HIS n 2 182 ARG n 2 183 ASP n 2 184 LEU n 2 185 ALA n 2 186 ASP n 2 187 PHE n 2 188 ARG n 2 189 ILE n 2 190 GLN n 2 191 HIS n 2 192 PRO n 2 193 ASP n 2 194 LEU n 2 195 ILE n 2 196 LEU n 2 197 LEU n 2 198 GLN n 2 199 TYR n 2 200 VAL n 2 201 ASP n 2 202 ASP n 2 203 LEU n 2 204 LEU n 2 205 LEU n 2 206 ALA n 2 207 ALA n 2 208 THR n 2 209 SER n 2 210 GLU n 2 211 LEU n 2 212 ASP n 2 213 CYS n 2 214 GLN n 2 215 GLN n 2 216 GLY n 2 217 THR n 2 218 ARG n 2 219 ALA n 2 220 LEU n 2 221 LEU n 2 222 GLN n 2 223 THR n 2 224 LEU n 2 225 GLY n 2 226 ASN n 2 227 LEU n 2 228 GLY n 2 229 TYR n 2 230 ARG n 2 231 ALA n 2 232 SER n 2 233 ALA n 2 234 LYS n 2 235 LYS n 2 236 ALA n 2 237 GLN n 2 238 ILE n 2 239 CYS n 2 240 GLN n 2 241 LYS n 2 242 GLN n 2 243 VAL n 2 244 LYS n 2 245 TYR n 2 246 LEU n 2 247 GLY n 2 248 TYR n 2 249 LEU n 2 250 LEU n 2 251 LYS n 2 252 GLU n 2 253 GLY n 2 254 GLN n 2 255 ARG n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Gammaretrovirus _entity_src_gen.pdbx_gene_src_gene pol _entity_src_gen.gene_src_species 'Murine leukemia virus' _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Moloney murine leukemia virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11801 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP POL_MLVMO P03355 2 144 ? ? 2 PDB 2FVS 2FVS 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2FVS A 1 ? 255 ? P03355 144 ? 398 ? 24 278 2 2 2FVS B 1 ? 16 ? 2FVS 1 ? 16 ? 1 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2FVS _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.72 _exptl_crystal.density_percent_sol 54.86 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'PEG 4000, magnesium acetate, ADA pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 4000' ? ? ? 1 2 1 'magnesium acetate' ? ? ? 1 3 1 ADA ? ? ? 1 4 1 H2O ? ? ? 1 5 2 'PEG 4000' ? ? ? 1 6 2 'magnesium acetate' ? ? ? 1 7 2 ADA ? ? ? 1 8 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 93 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2004-12-28 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'confocal mirrors' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 2FVS _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F -3.0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.35 _reflns.number_obs 16118 _reflns.number_all 16203 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.35 _reflns_shell.d_res_low 2.43 _reflns_shell.percent_possible_all 98.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2FVS _refine.ls_number_reflns_obs 15713 _refine.ls_number_reflns_all 16157 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.0 _refine.ls_d_res_high 2.35 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.2652 _refine.ls_R_factor_all 0.2652 _refine.ls_R_factor_R_work 0.2429 _refine.ls_R_factor_R_free 0.2652 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 765 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'pdb entry 1d1u' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2041 _refine_hist.pdbx_number_atoms_nucleic_acid 325 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 86 _refine_hist.number_atoms_total 2452 _refine_hist.d_res_high 2.35 _refine_hist.d_res_low 50.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006439 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.23186 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 2FVS _struct.title 'A Structural Study of the CA Dinucleotide Step in the Integrase Processing Site of Moloney Murine Leukemia Virus' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2FVS _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text 'LTR, MMLV, integrase, TRANSFERASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ;The second part of the biological assembly is generated by performing this transformation on the asymmetric unit: symmetry operator: -x, -y, z translation vector: 2 1 -1 ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR B 1 ? PHE B 6 ? THR A 24 PHE A 29 1 ? 6 HELX_P HELX_P2 2 PRO B 7 ? ALA B 9 ? PRO A 30 ALA A 32 5 ? 3 HELX_P HELX_P3 3 TRP B 10 ? GLY B 15 ? TRP A 33 GLY A 38 1 ? 6 HELX_P HELX_P4 4 SER B 44 ? GLN B 61 ? SER A 67 GLN A 84 1 ? 18 HELX_P HELX_P5 5 LEU B 92 ? LYS B 97 ? LEU A 115 LYS A 120 1 ? 6 HELX_P HELX_P6 6 ASN B 108 ? GLY B 115 ? ASN A 131 GLY A 138 1 ? 8 HELX_P HELX_P7 7 ALA B 131 ? LEU B 135 ? ALA A 154 LEU A 158 5 ? 5 HELX_P HELX_P8 8 SER B 141 ? ALA B 146 ? SER A 164 ALA A 169 5 ? 6 HELX_P HELX_P9 9 ASN B 171 ? HIS B 191 ? ASN A 194 HIS A 214 1 ? 21 HELX_P HELX_P10 10 SER B 209 ? GLY B 228 ? SER A 232 GLY A 251 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 A DG 16 N1 ? ? B DC 1 B DG 16 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 A DG 16 O6 ? ? B DC 1 B DG 16 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 A DG 16 N2 ? ? B DC 1 B DG 16 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 2 N1 ? ? ? 1_555 A DT 15 N3 ? ? B DA 2 B DT 15 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 2 N6 ? ? ? 1_555 A DT 15 O4 ? ? B DA 2 B DT 15 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 3 N3 ? ? ? 1_555 A DG 14 N1 ? ? B DC 3 B DG 14 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N4 ? ? ? 1_555 A DG 14 O6 ? ? B DC 3 B DG 14 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 O2 ? ? ? 1_555 A DG 14 N2 ? ? B DC 3 B DG 14 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 4 N1 ? ? ? 1_555 A DT 13 N3 ? ? B DA 4 B DT 13 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N6 ? ? ? 1_555 A DT 13 O4 ? ? B DA 4 B DT 13 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 5 N1 ? ? ? 1_555 A DT 12 N3 ? ? B DA 5 B DT 12 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 5 N6 ? ? ? 1_555 A DT 12 O4 ? ? B DA 5 B DT 12 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 6 N3 ? ? ? 1_555 A DA 11 N1 ? ? B DT 6 B DA 11 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 6 O4 ? ? ? 1_555 A DA 11 N6 ? ? B DT 6 B DA 11 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 7 N1 ? ? ? 1_555 A DC 10 N3 ? ? B DG 7 B DC 10 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A DC 10 O2 ? ? B DG 7 B DC 10 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 7 O6 ? ? ? 1_555 A DC 10 N4 ? ? B DG 7 B DC 10 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 8 N1 ? ? ? 1_555 A DT 9 N3 ? ? B DA 8 B DT 9 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 8 N6 ? ? ? 1_555 A DT 9 O4 ? ? B DA 8 B DT 9 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 9 N3 ? ? ? 1_555 A DA 8 N1 ? ? B DT 9 B DA 8 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 9 O4 ? ? ? 1_555 A DA 8 N6 ? ? B DT 9 B DA 8 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 10 N3 ? ? ? 1_555 A DG 7 N1 ? ? B DC 10 B DG 7 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 10 N4 ? ? ? 1_555 A DG 7 O6 ? ? B DC 10 B DG 7 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 10 O2 ? ? ? 1_555 A DG 7 N2 ? ? B DC 10 B DG 7 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 11 N1 ? ? ? 1_555 A DT 6 N3 ? ? B DA 11 B DT 6 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 11 N6 ? ? ? 1_555 A DT 6 O4 ? ? B DA 11 B DT 6 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DT 12 N3 ? ? ? 1_555 A DA 5 N1 ? ? B DT 12 B DA 5 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DT 12 O4 ? ? ? 1_555 A DA 5 N6 ? ? B DT 12 B DA 5 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DT 13 N3 ? ? ? 1_555 A DA 4 N1 ? ? B DT 13 B DA 4 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 13 O4 ? ? ? 1_555 A DA 4 N6 ? ? B DT 13 B DA 4 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 14 N1 ? ? ? 1_555 A DC 3 N3 ? ? B DG 14 B DC 3 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 14 N2 ? ? ? 1_555 A DC 3 O2 ? ? B DG 14 B DC 3 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 14 O6 ? ? ? 1_555 A DC 3 N4 ? ? B DG 14 B DC 3 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DT 15 N3 ? ? ? 1_555 A DA 2 N1 ? ? B DT 15 B DA 2 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DT 15 O4 ? ? ? 1_555 A DA 2 N6 ? ? B DT 15 B DA 2 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DG 16 N1 ? ? ? 1_555 A DC 1 N3 ? ? B DG 16 B DC 1 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DG 16 N2 ? ? ? 1_555 A DC 1 O2 ? ? B DG 16 B DC 1 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DG 16 O6 ? ? ? 1_555 A DC 1 N4 ? ? B DG 16 B DC 1 2_765 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? C ? 4 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU B 64 ? PRO B 66 ? LEU A 87 PRO A 89 A 2 GLN B 159 ? TRP B 162 ? GLN A 182 TRP A 185 A 3 PHE B 147 ? GLU B 148 ? PHE A 170 GLU A 171 B 1 LEU B 75 ? LYS B 79 ? LEU A 98 LYS A 102 B 2 TYR B 86 ? GLN B 90 ? TYR A 109 GLN A 113 C 1 ILE B 195 ? TYR B 199 ? ILE A 218 TYR A 222 C 2 ASP B 202 ? ALA B 207 ? ASP A 225 ALA A 230 C 3 TRP B 122 ? ASP B 127 ? TRP A 145 ASP A 150 C 4 GLN B 237 ? GLN B 240 ? GLN A 260 GLN A 263 D 1 GLN B 242 ? TYR B 245 ? GLN A 265 TYR A 268 D 2 TYR B 248 ? LYS B 251 ? TYR A 271 LYS A 274 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL B 65 ? N VAL A 88 O THR B 161 ? O THR A 184 A 2 3 O LEU B 160 ? O LEU A 183 N PHE B 147 ? N PHE A 170 B 1 2 N LEU B 76 ? N LEU A 99 O VAL B 89 ? O VAL A 112 C 1 2 N ILE B 195 ? N ILE A 218 O ALA B 206 ? O ALA A 229 C 2 3 O LEU B 203 ? O LEU A 226 N LEU B 126 ? N LEU A 149 C 3 4 N TYR B 123 ? N TYR A 146 O GLN B 240 ? O GLN A 263 D 1 2 N VAL B 243 ? N VAL A 266 O LEU B 250 ? O LEU A 273 # _database_PDB_matrix.entry_id 2FVS _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2FVS _atom_sites.fract_transf_matrix[1][1] 0.018437 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006864 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021302 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC CYT B . n A 1 2 DA 2 2 2 DA ADE B . n A 1 3 DC 3 3 3 DC CYT B . n A 1 4 DA 4 4 4 DA ADE B . n A 1 5 DA 5 5 5 DA ADE B . n A 1 6 DT 6 6 6 DT THY B . n A 1 7 DG 7 7 7 DG GUA B . n A 1 8 DA 8 8 8 DA ADE B . n A 1 9 DT 9 9 9 DT THY B . n A 1 10 DC 10 10 10 DC CYT B . n A 1 11 DA 11 11 11 DA ADE B . n A 1 12 DT 12 12 12 DT THY B . n A 1 13 DT 13 13 13 DT THY B . n A 1 14 DG 14 14 14 DG GUA B . n A 1 15 DT 15 15 15 DT THY B . n A 1 16 DG 16 16 16 DG GUA B . n B 2 1 THR 1 24 24 THR THR A . n B 2 2 TRP 2 25 25 TRP TRP A . n B 2 3 LEU 3 26 26 LEU LEU A . n B 2 4 SER 4 27 27 SER SER A . n B 2 5 ASP 5 28 28 ASP ASP A . n B 2 6 PHE 6 29 29 PHE PHE A . n B 2 7 PRO 7 30 30 PRO PRO A . n B 2 8 GLN 8 31 31 GLN GLN A . n B 2 9 ALA 9 32 32 ALA ALA A . n B 2 10 TRP 10 33 33 TRP TRP A . n B 2 11 ALA 11 34 34 ALA ALA A . n B 2 12 GLU 12 35 35 GLU GLU A . n B 2 13 THR 13 36 36 THR THR A . n B 2 14 GLY 14 37 37 GLY GLY A . n B 2 15 GLY 15 38 38 GLY GLY A . n B 2 16 MET 16 39 39 MET MET A . n B 2 17 GLY 17 40 40 GLY GLY A . n B 2 18 LEU 18 41 41 LEU LEU A . n B 2 19 ALA 19 42 42 ALA ALA A . n B 2 20 VAL 20 43 43 VAL VAL A . n B 2 21 ARG 21 44 44 ARG ARG A . n B 2 22 GLN 22 45 45 GLN GLN A . n B 2 23 ALA 23 46 46 ALA ALA A . n B 2 24 PRO 24 47 47 PRO PRO A . n B 2 25 LEU 25 48 48 LEU LEU A . n B 2 26 ILE 26 49 49 ILE ILE A . n B 2 27 ILE 27 50 50 ILE ILE A . n B 2 28 PRO 28 51 51 PRO PRO A . n B 2 29 LEU 29 52 52 LEU LEU A . n B 2 30 LYS 30 53 53 LYS LYS A . n B 2 31 ALA 31 54 54 ALA ALA A . n B 2 32 THR 32 55 55 THR THR A . n B 2 33 SER 33 56 56 SER SER A . n B 2 34 THR 34 57 57 THR THR A . n B 2 35 PRO 35 58 58 PRO PRO A . n B 2 36 VAL 36 59 59 VAL VAL A . n B 2 37 SER 37 60 60 SER SER A . n B 2 38 ILE 38 61 61 ILE ILE A . n B 2 39 LYS 39 62 62 LYS LYS A . n B 2 40 GLN 40 63 63 GLN GLN A . n B 2 41 TYR 41 64 64 TYR TYR A . n B 2 42 PRO 42 65 65 PRO PRO A . n B 2 43 MET 43 66 66 MET MET A . n B 2 44 SER 44 67 67 SER SER A . n B 2 45 GLN 45 68 68 GLN GLN A . n B 2 46 GLU 46 69 69 GLU GLU A . n B 2 47 ALA 47 70 70 ALA ALA A . n B 2 48 ARG 48 71 71 ARG ARG A . n B 2 49 LEU 49 72 72 LEU LEU A . n B 2 50 GLY 50 73 73 GLY GLY A . n B 2 51 ILE 51 74 74 ILE ILE A . n B 2 52 LYS 52 75 75 LYS LYS A . n B 2 53 PRO 53 76 76 PRO PRO A . n B 2 54 HIS 54 77 77 HIS HIS A . n B 2 55 ILE 55 78 78 ILE ILE A . n B 2 56 GLN 56 79 79 GLN GLN A . n B 2 57 ARG 57 80 80 ARG ARG A . n B 2 58 LEU 58 81 81 LEU LEU A . n B 2 59 LEU 59 82 82 LEU LEU A . n B 2 60 ASP 60 83 83 ASP ASP A . n B 2 61 GLN 61 84 84 GLN GLN A . n B 2 62 GLY 62 85 85 GLY GLY A . n B 2 63 ILE 63 86 86 ILE ILE A . n B 2 64 LEU 64 87 87 LEU LEU A . n B 2 65 VAL 65 88 88 VAL VAL A . n B 2 66 PRO 66 89 89 PRO PRO A . n B 2 67 CYS 67 90 90 CYS CYS A . n B 2 68 GLN 68 91 91 GLN GLN A . n B 2 69 SER 69 92 92 SER SER A . n B 2 70 PRO 70 93 93 PRO PRO A . n B 2 71 TRP 71 94 94 TRP TRP A . n B 2 72 ASN 72 95 95 ASN ASN A . n B 2 73 THR 73 96 96 THR THR A . n B 2 74 PRO 74 97 97 PRO PRO A . n B 2 75 LEU 75 98 98 LEU LEU A . n B 2 76 LEU 76 99 99 LEU LEU A . n B 2 77 PRO 77 100 100 PRO PRO A . n B 2 78 VAL 78 101 101 VAL VAL A . n B 2 79 LYS 79 102 102 LYS LYS A . n B 2 80 LYS 80 103 103 LYS LYS A . n B 2 81 PRO 81 104 104 PRO PRO A . n B 2 82 GLY 82 105 105 GLY GLY A . n B 2 83 THR 83 106 106 THR THR A . n B 2 84 ASN 84 107 107 ASN ASN A . n B 2 85 ASP 85 108 108 ASP ASP A . n B 2 86 TYR 86 109 109 TYR TYR A . n B 2 87 ARG 87 110 110 ARG ARG A . n B 2 88 PRO 88 111 111 PRO PRO A . n B 2 89 VAL 89 112 112 VAL VAL A . n B 2 90 GLN 90 113 113 GLN GLN A . n B 2 91 ASP 91 114 114 ASP ASP A . n B 2 92 LEU 92 115 115 LEU LEU A . n B 2 93 ARG 93 116 116 ARG ARG A . n B 2 94 GLU 94 117 117 GLU GLU A . n B 2 95 VAL 95 118 118 VAL VAL A . n B 2 96 ASN 96 119 119 ASN ASN A . n B 2 97 LYS 97 120 120 LYS LYS A . n B 2 98 ARG 98 121 121 ARG ARG A . n B 2 99 VAL 99 122 122 VAL VAL A . n B 2 100 GLU 100 123 123 GLU GLU A . n B 2 101 ASP 101 124 124 ASP ASP A . n B 2 102 ILE 102 125 125 ILE ILE A . n B 2 103 HIS 103 126 126 HIS HIS A . n B 2 104 PRO 104 127 127 PRO PRO A . n B 2 105 THR 105 128 128 THR THR A . n B 2 106 VAL 106 129 129 VAL VAL A . n B 2 107 PRO 107 130 130 PRO PRO A . n B 2 108 ASN 108 131 131 ASN ASN A . n B 2 109 PRO 109 132 132 PRO PRO A . n B 2 110 TYR 110 133 133 TYR TYR A . n B 2 111 ASN 111 134 134 ASN ASN A . n B 2 112 LEU 112 135 135 LEU LEU A . n B 2 113 LEU 113 136 136 LEU LEU A . n B 2 114 SER 114 137 137 SER SER A . n B 2 115 GLY 115 138 138 GLY GLY A . n B 2 116 LEU 116 139 139 LEU LEU A . n B 2 117 PRO 117 140 140 PRO PRO A . n B 2 118 PRO 118 141 141 PRO PRO A . n B 2 119 SER 119 142 142 SER SER A . n B 2 120 HIS 120 143 143 HIS HIS A . n B 2 121 GLN 121 144 144 GLN GLN A . n B 2 122 TRP 122 145 145 TRP TRP A . n B 2 123 TYR 123 146 146 TYR TYR A . n B 2 124 THR 124 147 147 THR THR A . n B 2 125 VAL 125 148 148 VAL VAL A . n B 2 126 LEU 126 149 149 LEU LEU A . n B 2 127 ASP 127 150 150 ASP ASP A . n B 2 128 LEU 128 151 151 LEU LEU A . n B 2 129 LYS 129 152 152 LYS LYS A . n B 2 130 ASP 130 153 153 ASP ASP A . n B 2 131 ALA 131 154 154 ALA ALA A . n B 2 132 PHE 132 155 155 PHE PHE A . n B 2 133 PHE 133 156 156 PHE PHE A . n B 2 134 CYS 134 157 157 CYS CYS A . n B 2 135 LEU 135 158 158 LEU LEU A . n B 2 136 ARG 136 159 159 ARG ARG A . n B 2 137 LEU 137 160 160 LEU LEU A . n B 2 138 HIS 138 161 161 HIS HIS A . n B 2 139 PRO 139 162 162 PRO PRO A . n B 2 140 THR 140 163 163 THR THR A . n B 2 141 SER 141 164 164 SER SER A . n B 2 142 GLN 142 165 165 GLN GLN A . n B 2 143 PRO 143 166 166 PRO PRO A . n B 2 144 LEU 144 167 167 LEU LEU A . n B 2 145 PHE 145 168 168 PHE PHE A . n B 2 146 ALA 146 169 169 ALA ALA A . n B 2 147 PHE 147 170 170 PHE PHE A . n B 2 148 GLU 148 171 171 GLU GLU A . n B 2 149 TRP 149 172 172 TRP TRP A . n B 2 150 ARG 150 173 173 ARG ARG A . n B 2 151 ASP 151 174 174 ASP ASP A . n B 2 152 PRO 152 175 175 PRO PRO A . n B 2 153 GLU 153 176 176 GLU GLU A . n B 2 154 MET 154 177 177 MET MET A . n B 2 155 GLY 155 178 178 GLY GLY A . n B 2 156 ILE 156 179 179 ILE ILE A . n B 2 157 SER 157 180 180 SER SER A . n B 2 158 GLY 158 181 181 GLY GLY A . n B 2 159 GLN 159 182 182 GLN GLN A . n B 2 160 LEU 160 183 183 LEU LEU A . n B 2 161 THR 161 184 184 THR THR A . n B 2 162 TRP 162 185 185 TRP TRP A . n B 2 163 THR 163 186 186 THR THR A . n B 2 164 ARG 164 187 187 ARG ARG A . n B 2 165 LEU 165 188 188 LEU LEU A . n B 2 166 PRO 166 189 189 PRO PRO A . n B 2 167 GLN 167 190 190 GLN GLN A . n B 2 168 GLY 168 191 191 GLY GLY A . n B 2 169 PHE 169 192 192 PHE PHE A . n B 2 170 LYS 170 193 193 LYS LYS A . n B 2 171 ASN 171 194 194 ASN ASN A . n B 2 172 SER 172 195 195 SER SER A . n B 2 173 PRO 173 196 196 PRO PRO A . n B 2 174 THR 174 197 197 THR THR A . n B 2 175 LEU 175 198 198 LEU LEU A . n B 2 176 PHE 176 199 199 PHE PHE A . n B 2 177 ASP 177 200 200 ASP ASP A . n B 2 178 GLU 178 201 201 GLU GLU A . n B 2 179 ALA 179 202 202 ALA ALA A . n B 2 180 LEU 180 203 203 LEU LEU A . n B 2 181 HIS 181 204 204 HIS HIS A . n B 2 182 ARG 182 205 205 ARG ARG A . n B 2 183 ASP 183 206 206 ASP ASP A . n B 2 184 LEU 184 207 207 LEU LEU A . n B 2 185 ALA 185 208 208 ALA ALA A . n B 2 186 ASP 186 209 209 ASP ASP A . n B 2 187 PHE 187 210 210 PHE PHE A . n B 2 188 ARG 188 211 211 ARG ARG A . n B 2 189 ILE 189 212 212 ILE ILE A . n B 2 190 GLN 190 213 213 GLN GLN A . n B 2 191 HIS 191 214 214 HIS HIS A . n B 2 192 PRO 192 215 215 PRO PRO A . n B 2 193 ASP 193 216 216 ASP ASP A . n B 2 194 LEU 194 217 217 LEU LEU A . n B 2 195 ILE 195 218 218 ILE ILE A . n B 2 196 LEU 196 219 219 LEU LEU A . n B 2 197 LEU 197 220 220 LEU LEU A . n B 2 198 GLN 198 221 221 GLN GLN A . n B 2 199 TYR 199 222 222 TYR TYR A . n B 2 200 VAL 200 223 223 VAL VAL A . n B 2 201 ASP 201 224 224 ASP ASP A . n B 2 202 ASP 202 225 225 ASP ASP A . n B 2 203 LEU 203 226 226 LEU LEU A . n B 2 204 LEU 204 227 227 LEU LEU A . n B 2 205 LEU 205 228 228 LEU LEU A . n B 2 206 ALA 206 229 229 ALA ALA A . n B 2 207 ALA 207 230 230 ALA ALA A . n B 2 208 THR 208 231 231 THR THR A . n B 2 209 SER 209 232 232 SER SER A . n B 2 210 GLU 210 233 233 GLU GLU A . n B 2 211 LEU 211 234 234 LEU LEU A . n B 2 212 ASP 212 235 235 ASP ASP A . n B 2 213 CYS 213 236 236 CYS CYS A . n B 2 214 GLN 214 237 237 GLN GLN A . n B 2 215 GLN 215 238 238 GLN GLN A . n B 2 216 GLY 216 239 239 GLY GLY A . n B 2 217 THR 217 240 240 THR THR A . n B 2 218 ARG 218 241 241 ARG ARG A . n B 2 219 ALA 219 242 242 ALA ALA A . n B 2 220 LEU 220 243 243 LEU LEU A . n B 2 221 LEU 221 244 244 LEU LEU A . n B 2 222 GLN 222 245 245 GLN GLN A . n B 2 223 THR 223 246 246 THR THR A . n B 2 224 LEU 224 247 247 LEU LEU A . n B 2 225 GLY 225 248 248 GLY GLY A . n B 2 226 ASN 226 249 249 ASN ASN A . n B 2 227 LEU 227 250 250 LEU LEU A . n B 2 228 GLY 228 251 251 GLY GLY A . n B 2 229 TYR 229 252 252 TYR TYR A . n B 2 230 ARG 230 253 253 ARG ARG A . n B 2 231 ALA 231 254 254 ALA ALA A . n B 2 232 SER 232 255 255 SER SER A . n B 2 233 ALA 233 256 256 ALA ALA A . n B 2 234 LYS 234 257 257 LYS LYS A . n B 2 235 LYS 235 258 258 LYS LYS A . n B 2 236 ALA 236 259 259 ALA ALA A . n B 2 237 GLN 237 260 260 GLN GLN A . n B 2 238 ILE 238 261 261 ILE ILE A . n B 2 239 CYS 239 262 262 CYS CYS A . n B 2 240 GLN 240 263 263 GLN GLN A . n B 2 241 LYS 241 264 264 LYS LYS A . n B 2 242 GLN 242 265 265 GLN GLN A . n B 2 243 VAL 243 266 266 VAL VAL A . n B 2 244 LYS 244 267 267 LYS LYS A . n B 2 245 TYR 245 268 268 TYR TYR A . n B 2 246 LEU 246 269 269 LEU LEU A . n B 2 247 GLY 247 270 270 GLY GLY A . n B 2 248 TYR 248 271 271 TYR TYR A . n B 2 249 LEU 249 272 272 LEU LEU A . n B 2 250 LEU 250 273 273 LEU LEU A . n B 2 251 LYS 251 274 274 LYS LYS A . n B 2 252 GLU 252 275 275 GLU GLU A . n B 2 253 GLY 253 276 276 GLY GLY A . n B 2 254 GLN 254 277 277 GLN GLN A . n B 2 255 ARG 255 278 278 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 63 63 HOH TIP B . D 3 HOH 1 279 1 HOH TIP A . D 3 HOH 2 280 2 HOH TIP A . D 3 HOH 3 281 3 HOH TIP A . D 3 HOH 4 282 4 HOH TIP A . D 3 HOH 5 283 5 HOH TIP A . D 3 HOH 6 284 6 HOH TIP A . D 3 HOH 7 285 7 HOH TIP A . D 3 HOH 8 286 8 HOH TIP A . D 3 HOH 9 287 9 HOH TIP A . D 3 HOH 10 288 10 HOH TIP A . D 3 HOH 11 289 11 HOH TIP A . D 3 HOH 12 290 12 HOH TIP A . D 3 HOH 13 291 13 HOH TIP A . D 3 HOH 14 292 14 HOH TIP A . D 3 HOH 15 293 15 HOH TIP A . D 3 HOH 16 294 16 HOH TIP A . D 3 HOH 17 295 17 HOH TIP A . D 3 HOH 18 296 18 HOH TIP A . D 3 HOH 19 297 19 HOH TIP A . D 3 HOH 20 298 20 HOH TIP A . D 3 HOH 21 299 21 HOH TIP A . D 3 HOH 22 300 23 HOH TIP A . D 3 HOH 23 301 24 HOH TIP A . D 3 HOH 24 302 25 HOH TIP A . D 3 HOH 25 303 26 HOH TIP A . D 3 HOH 26 304 27 HOH TIP A . D 3 HOH 27 305 28 HOH TIP A . D 3 HOH 28 306 29 HOH TIP A . D 3 HOH 29 307 30 HOH TIP A . D 3 HOH 30 308 31 HOH TIP A . D 3 HOH 31 309 32 HOH TIP A . D 3 HOH 32 310 33 HOH TIP A . D 3 HOH 33 311 34 HOH TIP A . D 3 HOH 34 312 35 HOH TIP A . D 3 HOH 35 313 36 HOH TIP A . D 3 HOH 36 314 37 HOH TIP A . D 3 HOH 37 315 38 HOH TIP A . D 3 HOH 38 316 39 HOH TIP A . D 3 HOH 39 317 40 HOH TIP A . D 3 HOH 40 318 41 HOH TIP A . D 3 HOH 41 319 42 HOH TIP A . D 3 HOH 42 320 43 HOH TIP A . D 3 HOH 43 321 44 HOH TIP A . D 3 HOH 44 322 45 HOH TIP A . D 3 HOH 45 323 46 HOH TIP A . D 3 HOH 46 324 47 HOH TIP A . D 3 HOH 47 325 48 HOH TIP A . D 3 HOH 48 326 49 HOH TIP A . D 3 HOH 49 327 50 HOH TIP A . D 3 HOH 50 328 51 HOH TIP A . D 3 HOH 51 329 52 HOH TIP A . D 3 HOH 52 330 53 HOH TIP A . D 3 HOH 53 331 54 HOH TIP A . D 3 HOH 54 332 55 HOH TIP A . D 3 HOH 55 333 56 HOH TIP A . D 3 HOH 56 334 57 HOH TIP A . D 3 HOH 57 335 58 HOH TIP A . D 3 HOH 58 336 59 HOH TIP A . D 3 HOH 59 337 60 HOH TIP A . D 3 HOH 60 338 61 HOH TIP A . D 3 HOH 61 339 62 HOH TIP A . D 3 HOH 62 340 64 HOH TIP A . D 3 HOH 63 341 65 HOH TIP A . D 3 HOH 64 342 66 HOH TIP A . D 3 HOH 65 343 67 HOH TIP A . D 3 HOH 66 344 68 HOH TIP A . D 3 HOH 67 345 69 HOH TIP A . D 3 HOH 68 346 70 HOH TIP A . D 3 HOH 69 347 71 HOH TIP A . D 3 HOH 70 348 72 HOH TIP A . D 3 HOH 71 349 73 HOH TIP A . D 3 HOH 72 350 74 HOH TIP A . D 3 HOH 73 351 75 HOH TIP A . D 3 HOH 74 352 76 HOH TIP A . D 3 HOH 75 353 77 HOH TIP A . D 3 HOH 76 354 78 HOH TIP A . D 3 HOH 77 355 79 HOH TIP A . D 3 HOH 78 356 80 HOH TIP A . D 3 HOH 79 357 81 HOH TIP A . D 3 HOH 80 358 82 HOH TIP A . D 3 HOH 81 359 83 HOH TIP A . D 3 HOH 82 360 84 HOH TIP A . D 3 HOH 83 361 85 HOH TIP A . D 3 HOH 84 362 86 HOH TIP A . D 3 HOH 85 363 87 HOH TIP A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_765 -x+2,-y+1,z -1.0000000000 0.0000000000 0.0000000000 108.4760000000 0.0000000000 -1.0000000000 0.0000000000 145.6800000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-12-12 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 CNS refinement 1.0 ? 4 HKL-2000 'data reduction' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 26 ? ? -59.81 4.31 2 1 LEU A 41 ? ? -166.22 114.95 3 1 LYS A 103 ? ? -102.20 -70.32 4 1 PRO A 104 ? ? -47.15 -89.13 5 1 THR A 106 ? ? -175.27 -31.61 6 1 ASP A 108 ? ? 31.35 112.76 7 1 PRO A 175 ? ? -13.98 -88.44 8 1 GLU A 176 ? ? -104.83 -60.40 9 1 ILE A 179 ? ? -46.50 158.54 10 1 SER A 180 ? ? -25.02 -77.27 11 1 VAL A 223 ? ? 63.99 -108.04 12 1 CYS A 262 ? ? 27.03 69.73 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 PRO N N N N 416 PRO CA C N S 417 PRO C C N N 418 PRO O O N N 419 PRO CB C N N 420 PRO CG C N N 421 PRO CD C N N 422 PRO OXT O N N 423 PRO H H N N 424 PRO HA H N N 425 PRO HB2 H N N 426 PRO HB3 H N N 427 PRO HG2 H N N 428 PRO HG3 H N N 429 PRO HD2 H N N 430 PRO HD3 H N N 431 PRO HXT H N N 432 SER N N N N 433 SER CA C N S 434 SER C C N N 435 SER O O N N 436 SER CB C N N 437 SER OG O N N 438 SER OXT O N N 439 SER H H N N 440 SER H2 H N N 441 SER HA H N N 442 SER HB2 H N N 443 SER HB3 H N N 444 SER HG H N N 445 SER HXT H N N 446 THR N N N N 447 THR CA C N S 448 THR C C N N 449 THR O O N N 450 THR CB C N R 451 THR OG1 O N N 452 THR CG2 C N N 453 THR OXT O N N 454 THR H H N N 455 THR H2 H N N 456 THR HA H N N 457 THR HB H N N 458 THR HG1 H N N 459 THR HG21 H N N 460 THR HG22 H N N 461 THR HG23 H N N 462 THR HXT H N N 463 TRP N N N N 464 TRP CA C N S 465 TRP C C N N 466 TRP O O N N 467 TRP CB C N N 468 TRP CG C Y N 469 TRP CD1 C Y N 470 TRP CD2 C Y N 471 TRP NE1 N Y N 472 TRP CE2 C Y N 473 TRP CE3 C Y N 474 TRP CZ2 C Y N 475 TRP CZ3 C Y N 476 TRP CH2 C Y N 477 TRP OXT O N N 478 TRP H H N N 479 TRP H2 H N N 480 TRP HA H N N 481 TRP HB2 H N N 482 TRP HB3 H N N 483 TRP HD1 H N N 484 TRP HE1 H N N 485 TRP HE3 H N N 486 TRP HZ2 H N N 487 TRP HZ3 H N N 488 TRP HH2 H N N 489 TRP HXT H N N 490 TYR N N N N 491 TYR CA C N S 492 TYR C C N N 493 TYR O O N N 494 TYR CB C N N 495 TYR CG C Y N 496 TYR CD1 C Y N 497 TYR CD2 C Y N 498 TYR CE1 C Y N 499 TYR CE2 C Y N 500 TYR CZ C Y N 501 TYR OH O N N 502 TYR OXT O N N 503 TYR H H N N 504 TYR H2 H N N 505 TYR HA H N N 506 TYR HB2 H N N 507 TYR HB3 H N N 508 TYR HD1 H N N 509 TYR HD2 H N N 510 TYR HE1 H N N 511 TYR HE2 H N N 512 TYR HH H N N 513 TYR HXT H N N 514 VAL N N N N 515 VAL CA C N S 516 VAL C C N N 517 VAL O O N N 518 VAL CB C N N 519 VAL CG1 C N N 520 VAL CG2 C N N 521 VAL OXT O N N 522 VAL H H N N 523 VAL H2 H N N 524 VAL HA H N N 525 VAL HB H N N 526 VAL HG11 H N N 527 VAL HG12 H N N 528 VAL HG13 H N N 529 VAL HG21 H N N 530 VAL HG22 H N N 531 VAL HG23 H N N 532 VAL HXT H N N 533 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TYR N CA sing N N 483 TYR N H sing N N 484 TYR N H2 sing N N 485 TYR CA C sing N N 486 TYR CA CB sing N N 487 TYR CA HA sing N N 488 TYR C O doub N N 489 TYR C OXT sing N N 490 TYR CB CG sing N N 491 TYR CB HB2 sing N N 492 TYR CB HB3 sing N N 493 TYR CG CD1 doub Y N 494 TYR CG CD2 sing Y N 495 TYR CD1 CE1 sing Y N 496 TYR CD1 HD1 sing N N 497 TYR CD2 CE2 doub Y N 498 TYR CD2 HD2 sing N N 499 TYR CE1 CZ doub Y N 500 TYR CE1 HE1 sing N N 501 TYR CE2 CZ sing Y N 502 TYR CE2 HE2 sing N N 503 TYR CZ OH sing N N 504 TYR OH HH sing N N 505 TYR OXT HXT sing N N 506 VAL N CA sing N N 507 VAL N H sing N N 508 VAL N H2 sing N N 509 VAL CA C sing N N 510 VAL CA CB sing N N 511 VAL CA HA sing N N 512 VAL C O doub N N 513 VAL C OXT sing N N 514 VAL CB CG1 sing N N 515 VAL CB CG2 sing N N 516 VAL CB HB sing N N 517 VAL CG1 HG11 sing N N 518 VAL CG1 HG12 sing N N 519 VAL CG1 HG13 sing N N 520 VAL CG2 HG21 sing N N 521 VAL CG2 HG22 sing N N 522 VAL CG2 HG23 sing N N 523 VAL OXT HXT sing N N 524 # _ndb_struct_conf_na.entry_id 2FVS _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 A DG 16 2_765 -0.009 0.093 -0.019 -11.467 0.096 0.887 1 B_DC1:DG16_B B 1 ? B 16 ? 19 1 1 A DA 2 1_555 A DT 15 2_765 -0.517 -0.021 0.045 -7.482 -3.524 10.746 2 B_DA2:DT15_B B 2 ? B 15 ? 20 1 1 A DC 3 1_555 A DG 14 2_765 0.271 -0.311 -0.191 8.748 -6.041 1.831 3 B_DC3:DG14_B B 3 ? B 14 ? 19 1 1 A DA 4 1_555 A DT 13 2_765 0.798 0.260 0.087 6.531 -14.704 1.421 4 B_DA4:DT13_B B 4 ? B 13 ? 20 1 1 A DA 5 1_555 A DT 12 2_765 -0.231 -0.046 0.194 8.851 -12.439 8.206 5 B_DA5:DT12_B B 5 ? B 12 ? 20 1 1 A DT 6 1_555 A DA 11 2_765 -1.052 -0.360 -0.317 13.677 -6.737 -1.315 6 B_DT6:DA11_B B 6 ? B 11 ? 20 1 1 A DG 7 1_555 A DC 10 2_765 -0.473 -0.394 -0.034 -3.531 -5.445 0.691 7 B_DG7:DC10_B B 7 ? B 10 ? 19 1 1 A DA 8 1_555 A DT 9 2_765 -0.138 -0.518 -0.093 -2.928 -3.283 2.016 8 B_DA8:DT9_B B 8 ? B 9 ? 20 1 1 A DT 9 1_555 A DA 8 2_765 0.138 -0.518 -0.093 2.928 -3.283 2.016 9 B_DT9:DA8_B B 9 ? B 8 ? 20 1 1 A DC 10 1_555 A DG 7 2_765 0.473 -0.394 -0.034 3.531 -5.445 0.691 10 B_DC10:DG7_B B 10 ? B 7 ? 19 1 1 A DA 11 1_555 A DT 6 2_765 1.052 -0.360 -0.317 -13.677 -6.737 -1.315 11 B_DA11:DT6_B B 11 ? B 6 ? 20 1 1 A DT 12 1_555 A DA 5 2_765 0.231 -0.046 0.194 -8.851 -12.439 8.206 12 B_DT12:DA5_B B 12 ? B 5 ? 20 1 1 A DT 13 1_555 A DA 4 2_765 -0.798 0.260 0.087 -6.531 -14.704 1.421 13 B_DT13:DA4_B B 13 ? B 4 ? 20 1 1 A DG 14 1_555 A DC 3 2_765 -0.271 -0.311 -0.191 -8.748 -6.041 1.831 14 B_DG14:DC3_B B 14 ? B 3 ? 19 1 1 A DT 15 1_555 A DA 2 2_765 0.517 -0.021 0.045 7.482 -3.524 10.746 15 B_DT15:DA2_B B 15 ? B 2 ? 20 1 1 A DG 16 1_555 A DC 1 2_765 0.009 0.093 -0.019 11.467 0.096 0.887 16 B_DG16:DC1_B B 16 ? B 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 A DG 16 2_765 A DA 2 1_555 A DT 15 2_765 0.751 0.398 3.218 1.783 3.372 36.615 0.174 -0.948 3.272 5.350 -2.829 36.807 1 BB_DC1DA2:DT15DG16_BB B 1 ? B 16 ? B 2 ? B 15 ? 1 A DA 2 1_555 A DT 15 2_765 A DC 3 1_555 A DG 14 2_765 -0.593 -0.772 2.898 1.122 5.241 28.011 -2.597 1.424 2.687 10.703 -2.292 28.509 2 BB_DA2DC3:DG14DT15_BB B 2 ? B 15 ? B 3 ? B 14 ? 1 A DC 3 1_555 A DG 14 2_765 A DA 4 1_555 A DT 13 2_765 -0.616 0.650 3.280 -2.365 2.881 40.128 0.614 0.623 3.347 4.188 3.437 40.294 3 BB_DC3DA4:DT13DG14_BB B 3 ? B 14 ? B 4 ? B 13 ? 1 A DA 4 1_555 A DT 13 2_765 A DA 5 1_555 A DT 12 2_765 0.657 -0.402 3.146 1.148 4.794 31.680 -1.553 -0.993 3.075 8.716 -2.087 32.051 4 BB_DA4DA5:DT12DT13_BB B 4 ? B 13 ? B 5 ? B 12 ? 1 A DA 5 1_555 A DT 12 2_765 A DT 6 1_555 A DA 11 2_765 -0.322 -0.505 3.133 3.316 -0.013 27.850 -1.039 1.409 3.075 -0.026 -6.858 28.043 5 BB_DA5DT6:DA11DT12_BB B 5 ? B 12 ? B 6 ? B 11 ? 1 A DT 6 1_555 A DA 11 2_765 A DG 7 1_555 A DC 10 2_765 0.552 -0.296 3.750 -0.854 2.749 37.106 -0.881 -0.995 3.707 4.312 1.340 37.214 6 BB_DT6DG7:DC10DA11_BB B 6 ? B 11 ? B 7 ? B 10 ? 1 A DG 7 1_555 A DC 10 2_765 A DA 8 1_555 A DT 9 2_765 0.061 -0.552 3.285 2.513 -0.639 37.812 -0.768 0.230 3.291 -0.985 -3.872 37.898 7 BB_DG7DA8:DT9DC10_BB B 7 ? B 10 ? B 8 ? B 9 ? 1 A DA 8 1_555 A DT 9 2_765 A DT 9 1_555 A DA 8 2_765 0.000 -0.569 3.086 0.000 -1.394 36.242 -0.729 0.000 3.105 -2.240 0.000 36.268 8 BB_DA8DT9:DA8DT9_BB B 8 ? B 9 ? B 9 ? B 8 ? 1 A DT 9 1_555 A DA 8 2_765 A DC 10 1_555 A DG 7 2_765 -0.061 -0.552 3.285 -2.513 -0.639 37.812 -0.768 -0.230 3.291 -0.985 3.872 37.898 9 BB_DT9DC10:DG7DA8_BB B 9 ? B 8 ? B 10 ? B 7 ? 1 A DC 10 1_555 A DG 7 2_765 A DA 11 1_555 A DT 6 2_765 -0.552 -0.296 3.750 0.854 2.749 37.106 -0.881 0.995 3.707 4.312 -1.340 37.214 10 BB_DC10DA11:DT6DG7_BB B 10 ? B 7 ? B 11 ? B 6 ? 1 A DA 11 1_555 A DT 6 2_765 A DT 12 1_555 A DA 5 2_765 0.322 -0.505 3.133 -3.316 -0.013 27.850 -1.039 -1.409 3.075 -0.026 6.858 28.043 11 BB_DA11DT12:DA5DT6_BB B 11 ? B 6 ? B 12 ? B 5 ? 1 A DT 12 1_555 A DA 5 2_765 A DT 13 1_555 A DA 4 2_765 -0.657 -0.402 3.146 -1.148 4.794 31.680 -1.553 0.993 3.075 8.716 2.087 32.051 12 BB_DT12DT13:DA4DA5_BB B 12 ? B 5 ? B 13 ? B 4 ? 1 A DT 13 1_555 A DA 4 2_765 A DG 14 1_555 A DC 3 2_765 0.616 0.650 3.280 2.365 2.881 40.128 0.614 -0.623 3.347 4.188 -3.437 40.294 13 BB_DT13DG14:DC3DA4_BB B 13 ? B 4 ? B 14 ? B 3 ? 1 A DG 14 1_555 A DC 3 2_765 A DT 15 1_555 A DA 2 2_765 0.593 -0.772 2.898 -1.122 5.241 28.011 -2.597 -1.424 2.687 10.703 2.292 28.509 14 BB_DG14DT15:DA2DC3_BB B 14 ? B 3 ? B 15 ? B 2 ? 1 A DT 15 1_555 A DA 2 2_765 A DG 16 1_555 A DC 1 2_765 -0.751 0.398 3.218 -1.783 3.372 36.615 0.174 0.948 3.272 5.350 2.829 36.807 15 BB_DT15DG16:DC1DA2_BB B 15 ? B 2 ? B 16 ? B 1 ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1D1U _pdbx_initial_refinement_model.details 'pdb entry 1d1u' #