HEADER TRANSCRIPTION 03-FEB-06 2FX0 TITLE CRYSTAL STRUCTURE OF HLYIIR, A HEMOLYSIN II TRANSCRIPTIONAL REGULATOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMOLYSIN II REGULATORY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS CEREUS; SOURCE 3 ORGANISM_TAXID: 1396; SOURCE 4 STRAIN: B771; SOURCE 5 GENE: HLYIIR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: M15; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE30 KEYWDS TRANSCRIPTIONAL REGULATOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR O.V.KOVALEVSKIY,A.A.LEBEDEV,A.S.SOLONIN,A.A.ANTSON REVDAT 4 13-JUL-11 2FX0 1 VERSN REVDAT 3 24-FEB-09 2FX0 1 VERSN REVDAT 2 13-FEB-07 2FX0 1 JRNL REVDAT 1 21-FEB-06 2FX0 0 JRNL AUTH O.V.KOVALEVSKIY,A.A.LEBEDEV,A.K.SURIN,A.S.SOLONIN,A.A.ANTSON JRNL TITL CRYSTAL STRUCTURE OF BACILLUS CEREUS HLYIIR, A JRNL TITL 2 TRANSCRIPTIONAL REGULATOR OF THE GENE FOR PORE-FORMING TOXIN JRNL TITL 3 HEMOLYSIN II. JRNL REF J.MOL.BIOL. V. 365 825 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17097673 JRNL DOI 10.1016/J.JMB.2006.10.074 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 13895 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 695 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 995 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE SET COUNT : 58 REMARK 3 BIN FREE R VALUE : 0.3750 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1476 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 114 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 45.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.39000 REMARK 3 B22 (A**2) : 1.39000 REMARK 3 B33 (A**2) : -2.09000 REMARK 3 B12 (A**2) : 0.70000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.247 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.228 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.189 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.633 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1508 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2025 ; 1.172 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 177 ; 5.954 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 74 ;38.879 ;24.865 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 287 ;15.644 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;13.018 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 218 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1121 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 746 ; 0.207 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1059 ; 0.309 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 84 ; 0.171 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 55 ; 0.389 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.224 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 930 ; 1.274 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1437 ; 1.895 ; 4.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 667 ; 4.569 ; 8.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 588 ; 6.787 ;12.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 21 REMARK 3 ORIGIN FOR THE GROUP (A): 24.4537 76.5284 63.9587 REMARK 3 T TENSOR REMARK 3 T11: 0.0287 T22: -0.1394 REMARK 3 T33: -0.0828 T12: 0.1541 REMARK 3 T13: 0.0119 T23: -0.0175 REMARK 3 L TENSOR REMARK 3 L11: 3.7674 L22: 6.1794 REMARK 3 L33: 6.9948 L12: 0.1464 REMARK 3 L13: 0.4691 L23: -2.1802 REMARK 3 S TENSOR REMARK 3 S11: -0.1466 S12: -0.1963 S13: 0.3671 REMARK 3 S21: 0.5489 S22: 0.0147 S23: -0.1999 REMARK 3 S31: -0.5464 S32: 0.9860 S33: 0.1319 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 22 A 41 REMARK 3 ORIGIN FOR THE GROUP (A): 17.1136 71.1867 68.9095 REMARK 3 T TENSOR REMARK 3 T11: 0.0454 T22: -0.0981 REMARK 3 T33: -0.1309 T12: 0.1920 REMARK 3 T13: 0.1729 T23: 0.1210 REMARK 3 L TENSOR REMARK 3 L11: 5.7889 L22: 18.2870 REMARK 3 L33: 7.6762 L12: -5.0535 REMARK 3 L13: 0.4686 L23: -0.7230 REMARK 3 S TENSOR REMARK 3 S11: -0.4506 S12: -0.9415 S13: -0.0639 REMARK 3 S21: 1.1891 S22: 0.3707 S23: 0.6710 REMARK 3 S31: 0.1427 S32: -0.1396 S33: 0.0799 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 42 A 62 REMARK 3 ORIGIN FOR THE GROUP (A): 22.1410 70.5675 59.0300 REMARK 3 T TENSOR REMARK 3 T11: -0.0919 T22: -0.0941 REMARK 3 T33: -0.0972 T12: 0.1587 REMARK 3 T13: 0.0538 T23: 0.0474 REMARK 3 L TENSOR REMARK 3 L11: 5.1151 L22: 6.7550 REMARK 3 L33: 6.2308 L12: -2.6920 REMARK 3 L13: 3.4289 L23: 0.0219 REMARK 3 S TENSOR REMARK 3 S11: 0.3567 S12: 0.4152 S13: -0.1572 REMARK 3 S21: -0.1867 S22: -0.0861 S23: 0.3891 REMARK 3 S31: 0.1090 S32: 0.8644 S33: -0.2706 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 63 A 71 REMARK 3 ORIGIN FOR THE GROUP (A): 43.9436 66.7988 59.5596 REMARK 3 T TENSOR REMARK 3 T11: -0.1255 T22: 0.5411 REMARK 3 T33: 0.0154 T12: 0.3705 REMARK 3 T13: -0.0139 T23: 0.1120 REMARK 3 L TENSOR REMARK 3 L11: 50.1055 L22: 6.7758 REMARK 3 L33: 4.6600 L12: -2.0415 REMARK 3 L13: -2.9845 L23: 5.5987 REMARK 3 S TENSOR REMARK 3 S11: 0.4788 S12: -0.1957 S13: 1.1123 REMARK 3 S21: -0.3941 S22: -0.5198 S23: 1.0350 REMARK 3 S31: -0.8585 S32: -0.8314 S33: 0.0410 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 72 A 84 REMARK 3 ORIGIN FOR THE GROUP (A): 56.2806 61.2777 62.1310 REMARK 3 T TENSOR REMARK 3 T11: -0.3032 T22: 0.1248 REMARK 3 T33: -0.1339 T12: 0.1061 REMARK 3 T13: -0.0256 T23: -0.0144 REMARK 3 L TENSOR REMARK 3 L11: 14.9487 L22: 7.9947 REMARK 3 L33: 8.8537 L12: 0.6586 REMARK 3 L13: -3.6206 L23: -0.6598 REMARK 3 S TENSOR REMARK 3 S11: -0.1977 S12: -0.4249 S13: 0.1117 REMARK 3 S21: 0.0830 S22: 0.4376 S23: -0.0092 REMARK 3 S31: -1.0016 S32: 0.3899 S33: -0.2399 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 85 A 91 REMARK 3 ORIGIN FOR THE GROUP (A): 46.9129 63.6331 68.3292 REMARK 3 T TENSOR REMARK 3 T11: -0.2549 T22: 0.5086 REMARK 3 T33: -0.0992 T12: 0.3659 REMARK 3 T13: -0.0201 T23: 0.0792 REMARK 3 L TENSOR REMARK 3 L11: 5.4853 L22: 8.3790 REMARK 3 L33: 14.2240 L12: -2.9911 REMARK 3 L13: -2.9264 L23: 10.8395 REMARK 3 S TENSOR REMARK 3 S11: -0.5652 S12: -0.2679 S13: 1.1631 REMARK 3 S21: 0.4741 S22: 0.2022 S23: 0.5686 REMARK 3 S31: -1.2022 S32: -0.8934 S33: 0.3630 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 92 A 102 REMARK 3 ORIGIN FOR THE GROUP (A): 36.4838 66.8759 72.6266 REMARK 3 T TENSOR REMARK 3 T11: -0.1291 T22: 0.6398 REMARK 3 T33: 0.0075 T12: 0.4832 REMARK 3 T13: -0.0071 T23: -0.1952 REMARK 3 L TENSOR REMARK 3 L11: 26.2023 L22: 24.0096 REMARK 3 L33: 12.9339 L12: 22.7465 REMARK 3 L13: 13.7971 L23: 7.0614 REMARK 3 S TENSOR REMARK 3 S11: 0.4781 S12: -2.3979 S13: 1.3372 REMARK 3 S21: -0.0041 S22: -1.0236 S23: 0.7137 REMARK 3 S31: 0.1410 S32: 0.3560 S33: 0.5455 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 103 A 128 REMARK 3 ORIGIN FOR THE GROUP (A): 31.5263 57.1865 61.4708 REMARK 3 T TENSOR REMARK 3 T11: -0.1008 T22: 0.3901 REMARK 3 T33: -0.1190 T12: 0.3702 REMARK 3 T13: 0.0029 T23: 0.1892 REMARK 3 L TENSOR REMARK 3 L11: 8.5237 L22: 4.4244 REMARK 3 L33: 0.4540 L12: -4.3009 REMARK 3 L13: -0.4740 L23: 1.2210 REMARK 3 S TENSOR REMARK 3 S11: 0.6997 S12: 0.8447 S13: -0.4050 REMARK 3 S21: -0.4447 S22: -0.8358 S23: 0.1736 REMARK 3 S31: 0.1599 S32: 0.5687 S33: 0.1361 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 129 A 143 REMARK 3 ORIGIN FOR THE GROUP (A): 53.7123 51.1345 62.0258 REMARK 3 T TENSOR REMARK 3 T11: -0.3711 T22: 0.2199 REMARK 3 T33: -0.0182 T12: 0.0151 REMARK 3 T13: -0.0142 T23: 0.0817 REMARK 3 L TENSOR REMARK 3 L11: 9.1861 L22: 2.4177 REMARK 3 L33: 8.3918 L12: -2.7630 REMARK 3 L13: 0.3171 L23: -1.9822 REMARK 3 S TENSOR REMARK 3 S11: -0.0814 S12: -0.3192 S13: -0.5515 REMARK 3 S21: -0.1340 S22: 0.2523 S23: 0.1202 REMARK 3 S31: 0.1634 S32: -0.7874 S33: -0.1709 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 144 A 169 REMARK 3 ORIGIN FOR THE GROUP (A): 41.5943 51.2860 74.1652 REMARK 3 T TENSOR REMARK 3 T11: -0.2453 T22: 0.4797 REMARK 3 T33: 0.1018 T12: 0.0652 REMARK 3 T13: -0.0037 T23: 0.2257 REMARK 3 L TENSOR REMARK 3 L11: 4.0089 L22: 1.4446 REMARK 3 L33: 6.0402 L12: -2.4065 REMARK 3 L13: -4.9208 L23: 2.9539 REMARK 3 S TENSOR REMARK 3 S11: -0.5503 S12: 0.1562 S13: -0.0733 REMARK 3 S21: 0.5647 S22: 0.3933 S23: -0.2282 REMARK 3 S31: 0.4511 S32: -0.0893 S33: 0.1570 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 186 A 198 REMARK 3 ORIGIN FOR THE GROUP (A): 53.6161 53.5877 74.8327 REMARK 3 T TENSOR REMARK 3 T11: -0.2824 T22: 0.3310 REMARK 3 T33: -0.2240 T12: 0.0625 REMARK 3 T13: -0.0062 T23: 0.0964 REMARK 3 L TENSOR REMARK 3 L11: 15.5502 L22: 14.2593 REMARK 3 L33: 10.2844 L12: -5.5539 REMARK 3 L13: -2.4146 L23: 2.7383 REMARK 3 S TENSOR REMARK 3 S11: -0.3623 S12: -1.2222 S13: -0.2539 REMARK 3 S21: 0.9958 S22: 0.5960 S23: -0.0839 REMARK 3 S31: -0.0766 S32: -0.2950 S33: -0.2337 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2FX0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-FEB-06. REMARK 100 THE RCSB ID CODE IS RCSB036413. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-SEP-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792,0.9794,0.9184 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL CUT REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14561 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.34000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40% SATURATION AMMONIUM SULFATE, 0.1M REMARK 280 SODIUM ACETATE, PH 5.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.55567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.11133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 39.83350 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 66.38917 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 13.27783 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 26.55567 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 53.11133 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 66.38917 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 39.83350 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 13.27783 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE SECOND SUBUNIT OF BIOLOGICAL DIMER IS GENERATED BY THE REMARK 300 OPERATIONS: ROTATION MATRIX: 0.50000 -0.86603 0.00000 -0.86603 - REMARK 300 0.50000 0.00000 0.00000 0.00000 -1.00000 TRANSLATION VECTOR IN AS REMARK 300 0.00001 0.00000 66.38908 OR 1-Y, 1-X, 11/6-Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 3580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 62.10400 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 107.56728 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 146.05617 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 269 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 GLY A 2 REMARK 465 LYS A 3 REMARK 465 LEU A 170 REMARK 465 GLY A 171 REMARK 465 THR A 172 REMARK 465 ASN A 173 REMARK 465 GLU A 174 REMARK 465 THR A 175 REMARK 465 ASN A 176 REMARK 465 ASP A 177 REMARK 465 THR A 178 REMARK 465 ASN A 179 REMARK 465 HIS A 180 REMARK 465 GLU A 181 REMARK 465 TRP A 182 REMARK 465 MSE A 183 REMARK 465 PRO A 184 REMARK 465 GLU A 185 REMARK 465 PRO A 199 REMARK 465 ASN A 200 REMARK 465 ILE A 201 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CB TYR A 105 CZ TYR A 105 10666 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 99 CB GLU A 99 CG 0.122 REMARK 500 GLU A 99 CD GLU A 99 OE1 0.147 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 98 33.80 -75.97 REMARK 500 GLU A 111 -157.09 -104.61 REMARK 500 SER A 112 -51.47 -151.38 REMARK 500 LYS A 119 -57.66 -27.28 REMARK 500 PRO A 120 -3.19 -50.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 110 GLU A 111 -147.43 REMARK 500 REMARK 500 REMARK: NULL DBREF 2FX0 A 1 201 GB 31322346 AAO74585 1 201 SEQADV 2FX0 MSE A 1 GB 31322346 MET 1 MODIFIED RESIDUE SEQADV 2FX0 MSE A 9 GB 31322346 MET 9 MODIFIED RESIDUE SEQADV 2FX0 MSE A 43 GB 31322346 MET 43 MODIFIED RESIDUE SEQADV 2FX0 MSE A 183 GB 31322346 MET 183 MODIFIED RESIDUE SEQRES 1 A 201 MSE GLY LYS SER ARG GLU GLN THR MSE GLU ASN ILE LEU SEQRES 2 A 201 LYS ALA ALA LYS LYS LYS PHE GLY GLU ARG GLY TYR GLU SEQRES 3 A 201 GLY THR SER ILE GLN GLU ILE ALA LYS GLU ALA LYS VAL SEQRES 4 A 201 ASN VAL ALA MSE ALA SER TYR TYR PHE ASN GLY LYS GLU SEQRES 5 A 201 ASN LEU TYR TYR GLU VAL PHE LYS LYS TYR GLY LEU ALA SEQRES 6 A 201 ASN GLU LEU PRO ASN PHE LEU GLU LYS ASN GLN PHE ASN SEQRES 7 A 201 PRO ILE ASN ALA LEU ARG GLU TYR LEU THR VAL PHE THR SEQRES 8 A 201 THR HIS ILE LYS GLU ASN PRO GLU ILE GLY THR LEU ALA SEQRES 9 A 201 TYR GLU GLU ILE ILE LYS GLU SER ALA ARG LEU GLU LYS SEQRES 10 A 201 ILE LYS PRO TYR PHE ILE GLY SER PHE GLU GLN LEU LYS SEQRES 11 A 201 GLU ILE LEU GLN GLU GLY GLU LYS GLN GLY VAL PHE HIS SEQRES 12 A 201 PHE PHE SER ILE ASN HIS THR ILE HIS TRP ILE THR SER SEQRES 13 A 201 ILE VAL LEU PHE PRO LYS PHE LYS LYS PHE ILE ASP SER SEQRES 14 A 201 LEU GLY THR ASN GLU THR ASN ASP THR ASN HIS GLU TRP SEQRES 15 A 201 MSE PRO GLU ASP LEU VAL SER ARG ILE ILE SER ALA LEU SEQRES 16 A 201 THR ASP LYS PRO ASN ILE MODRES 2FX0 MSE A 9 MET SELENOMETHIONINE MODRES 2FX0 MSE A 43 MET SELENOMETHIONINE HET MSE A 9 8 HET MSE A 43 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 2 HOH *114(H2 O) HELIX 1 1 SER A 4 GLY A 24 1 21 HELIX 2 2 SER A 29 LYS A 38 1 10 HELIX 3 3 ASN A 40 ASN A 49 1 10 HELIX 4 4 GLY A 50 GLY A 63 1 14 HELIX 5 5 LEU A 64 LEU A 68 5 5 HELIX 6 6 ASN A 70 ASN A 75 1 6 HELIX 7 7 ASN A 78 ASN A 97 1 20 HELIX 8 8 ILE A 100 ILE A 108 1 9 HELIX 9 9 ARG A 114 LYS A 119 1 6 HELIX 10 10 PHE A 122 GLN A 139 1 18 HELIX 11 11 SER A 146 PHE A 160 1 15 HELIX 12 12 PHE A 160 SER A 169 1 10 HELIX 13 13 ASP A 186 ASP A 197 1 12 LINK C THR A 8 N MSE A 9 1555 1555 1.33 LINK C MSE A 9 N GLU A 10 1555 1555 1.33 LINK C ALA A 42 N MSE A 43 1555 1555 1.33 LINK C MSE A 43 N ALA A 44 1555 1555 1.34 CRYST1 124.208 124.208 79.667 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008051 0.004648 0.000000 0.00000 SCALE2 0.000000 0.009297 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012552 0.00000