HEADER TRANSFERASE 07-FEB-06 2FYB TITLE CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF THE HUMAN BETA1,4- TITLE 2 GALACTOSYLTRANSFERASE MUTANT M339H IN COMPLEX WITH MN AND UDP- TITLE 3 GALACTOSE IN OPEN CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-1,4-GALACTOSYLTRANSFERASE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC DOMAIN, RESIDUES 125-397; COMPND 5 EC: 2.4.1.90; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: B4GALT1, GGTB2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET23A KEYWDS M339H MUTANT, COMPLEX WITH UDP-GALACTOSE AND MN, OPEN CONFORMATION, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR B.RAMAKRISHNAN,V.RAMASAMY,P.K.QASBA REVDAT 6 30-OCT-24 2FYB 1 REMARK REVDAT 5 30-AUG-23 2FYB 1 REMARK REVDAT 4 20-OCT-21 2FYB 1 REMARK SEQADV LINK REVDAT 3 24-FEB-09 2FYB 1 VERSN REVDAT 2 11-APR-06 2FYB 1 JRNL REVDAT 1 14-MAR-06 2FYB 0 JRNL AUTH B.RAMAKRISHNAN,V.RAMASAMY,P.K.QASBA JRNL TITL STRUCTURAL SNAPSHOTS OF BETA-1,4-GALACTOSYLTRANSFERASE-I JRNL TITL 2 ALONG THE KINETIC PATHWAY. JRNL REF J.MOL.BIOL. V. 357 1619 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16497331 JRNL DOI 10.1016/J.JMB.2006.01.088 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1662956.420 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 25263 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2517 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3702 REMARK 3 BIN R VALUE (WORKING SET) : 0.2190 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.50 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 436 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.013 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2194 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.11000 REMARK 3 B22 (A**2) : -3.68000 REMARK 3 B33 (A**2) : 1.57000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.18 REMARK 3 ESD FROM SIGMAA (A) : 0.11 REMARK 3 LOW RESOLUTION CUTOFF (A) : 6.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.15 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.014 REMARK 3 BOND ANGLES (DEGREES) : 1.700 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.070 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.330 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.980 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.130 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.050 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 52.77 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER.PARAM REMARK 3 PARAMETER FILE 4 : UDP_PG.PAR REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : UDP_PG.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RESIDUES 345 TO 350 COULD NOT BE TRACED REMARK 3 DUE TO LOW ELECTRON DENSITY REMARK 4 REMARK 4 2FYB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-FEB-06. REMARK 100 THE DEPOSITION ID IS D_1000036455. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27622 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 4.150 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05600 REMARK 200 FOR THE DATA SET : 22.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.38100 REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2FY7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 MG/ML PROTEIN SOLUTION, 5MM REMARK 280 MANGANESE CHLORIDE, 5MM UDP-GALACTOSE, 50 MM SODIUM CITRATE, 6% REMARK 280 PEG 4000, PH 5.6, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.21500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 33.21500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 35.28000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 68.86500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 35.28000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 68.86500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 33.21500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 35.28000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 68.86500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 33.21500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 35.28000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 68.86500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 112 REMARK 465 SER A 113 REMARK 465 MET A 114 REMARK 465 THR A 115 REMARK 465 GLY A 116 REMARK 465 GLY A 117 REMARK 465 GLN A 118 REMARK 465 GLN A 119 REMARK 465 MET A 120 REMARK 465 ARG A 345 REMARK 465 ASP A 346 REMARK 465 LYS A 347 REMARK 465 LYS A 348 REMARK 465 ASN A 349 REMARK 465 GLU A 350 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 185 114.59 -168.59 REMARK 500 ASN A 352 125.45 -31.79 REMARK 500 ASP A 357 -106.24 -67.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 250 OD2 REMARK 620 2 HIS A 340 NE2 94.0 REMARK 620 3 HIS A 343 NE2 93.2 90.3 REMARK 620 4 UDP A 403 O1A 91.0 174.7 87.7 REMARK 620 5 HOH A 561 O 114.7 90.4 152.0 89.0 REMARK 620 6 HOH A 699 O 163.7 80.3 71.8 94.4 80.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP A 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FY7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF THE HUMAN BETA1, 4- REMARK 900 GALACTOSYLTRANSFERASE MUTANT M339H IN APO FORM REMARK 900 RELATED ID: 2FYA RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF THE HUMAN BETA1, 4- REMARK 900 GALACTOSYLTRANSFERASE MUTANT M339H COMPLEX WITH MANGANESE REMARK 900 RELATED ID: 2FYC RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF BOVINE BETA1, 4- REMARK 900 GALACTOSYLTRANSFERASE-I IN COMPLEX WITH ALPHA-LACTALBUMIN, CA AND REMARK 900 UDP-GALACTOSE REMARK 900 RELATED ID: 2FYD RELATED DB: PDB REMARK 900 STRUCTURAL SNAPSHOTS OF BETA1,4-GALACTOSYLTRANSFERASE-I ALONG THE REMARK 900 KINETIC PATHWAY DBREF 2FYB A 126 398 UNP P15291 B4GT1_HUMAN 125 397 SEQADV 2FYB ALA A 112 UNP P15291 CLONING ARTIFACT SEQADV 2FYB SER A 113 UNP P15291 CLONING ARTIFACT SEQADV 2FYB MET A 114 UNP P15291 CLONING ARTIFACT SEQADV 2FYB THR A 115 UNP P15291 CLONING ARTIFACT SEQADV 2FYB GLY A 116 UNP P15291 CLONING ARTIFACT SEQADV 2FYB GLY A 117 UNP P15291 CLONING ARTIFACT SEQADV 2FYB GLN A 118 UNP P15291 CLONING ARTIFACT SEQADV 2FYB GLN A 119 UNP P15291 CLONING ARTIFACT SEQADV 2FYB MET A 120 UNP P15291 CLONING ARTIFACT SEQADV 2FYB GLY A 121 UNP P15291 CLONING ARTIFACT SEQADV 2FYB ARG A 122 UNP P15291 CLONING ARTIFACT SEQADV 2FYB GLY A 123 UNP P15291 CLONING ARTIFACT SEQADV 2FYB SER A 124 UNP P15291 CLONING ARTIFACT SEQADV 2FYB ALA A 125 UNP P15291 CLONING ARTIFACT SEQADV 2FYB THR A 337 UNP P15291 ARG 336 ENGINEERED MUTATION SEQADV 2FYB THR A 338 UNP P15291 CYS 337 ENGINEERED MUTATION SEQADV 2FYB HIS A 340 UNP P15291 MET 339 ENGINEERED MUTATION SEQRES 1 A 287 ALA SER MET THR GLY GLY GLN GLN MET GLY ARG GLY SER SEQRES 2 A 287 ALA SER LEU PRO ALA CYS PRO GLU GLU SER PRO LEU LEU SEQRES 3 A 287 VAL GLY PRO MET LEU ILE GLU PHE ASN MET PRO VAL ASP SEQRES 4 A 287 LEU GLU LEU VAL ALA LYS GLN ASN PRO ASN VAL LYS MET SEQRES 5 A 287 GLY GLY ARG TYR ALA PRO ARG ASP CYS VAL SER PRO HIS SEQRES 6 A 287 LYS VAL ALA ILE ILE ILE PRO PHE ARG ASN ARG GLN GLU SEQRES 7 A 287 HIS LEU LYS TYR TRP LEU TYR TYR LEU HIS PRO VAL LEU SEQRES 8 A 287 GLN ARG GLN GLN LEU ASP TYR GLY ILE TYR VAL ILE ASN SEQRES 9 A 287 GLN ALA GLY ASP THR ILE PHE ASN ARG ALA LYS LEU LEU SEQRES 10 A 287 ASN VAL GLY PHE GLN GLU ALA LEU LYS ASP TYR ASP TYR SEQRES 11 A 287 THR CYS PHE VAL PHE SER ASP VAL ASP LEU ILE PRO MET SEQRES 12 A 287 ASN ASP HIS ASN ALA TYR ARG CYS PHE SER GLN PRO ARG SEQRES 13 A 287 HIS ILE SER VAL ALA MET ASP LYS PHE GLY PHE SER LEU SEQRES 14 A 287 PRO TYR VAL GLN TYR PHE GLY GLY VAL SER ALA LEU SER SEQRES 15 A 287 LYS GLN GLN PHE LEU THR ILE ASN GLY PHE PRO ASN ASN SEQRES 16 A 287 TYR TRP GLY TRP GLY GLY GLU ASP ASP ASP ILE PHE ASN SEQRES 17 A 287 ARG LEU VAL PHE ARG GLY MET SER ILE SER ARG PRO ASN SEQRES 18 A 287 ALA VAL VAL GLY THR THR ARG HIS ILE ARG HIS SER ARG SEQRES 19 A 287 ASP LYS LYS ASN GLU PRO ASN PRO GLN ARG PHE ASP ARG SEQRES 20 A 287 ILE ALA HIS THR LYS GLU THR MET LEU SER ASP GLY LEU SEQRES 21 A 287 ASN SER LEU THR TYR GLN VAL LEU ASP VAL GLN ARG TYR SEQRES 22 A 287 PRO LEU TYR THR GLN ILE THR VAL ASP ILE GLY THR PRO SEQRES 23 A 287 SER HET MN A 402 1 HET UDP A 403 25 HETNAM MN MANGANESE (II) ION HETNAM UDP URIDINE-5'-DIPHOSPHATE FORMUL 2 MN MN 2+ FORMUL 3 UDP C9 H14 N2 O12 P2 FORMUL 4 HOH *350(H2 O) HELIX 1 1 ASP A 150 ASN A 158 1 9 HELIX 2 2 ARG A 187 GLN A 205 1 19 HELIX 3 3 ASN A 223 TYR A 239 1 17 HELIX 4 4 LYS A 275 GLY A 277 5 3 HELIX 5 5 LYS A 294 ILE A 300 1 7 HELIX 6 6 GLY A 312 ARG A 324 1 13 HELIX 7 7 ARG A 358 MET A 366 1 9 SHEET 1 A 6 ARG A 166 TYR A 167 0 SHEET 2 A 6 ASP A 208 GLN A 216 -1 O TYR A 209 N TYR A 167 SHEET 3 A 6 LYS A 177 PHE A 184 1 N ILE A 182 O TYR A 212 SHEET 4 A 6 CYS A 243 SER A 247 1 O VAL A 245 N ILE A 181 SHEET 5 A 6 VAL A 289 SER A 293 -1 O SER A 290 N PHE A 246 SHEET 6 A 6 ARG A 267 HIS A 268 -1 N ARG A 267 O ALA A 291 SHEET 1 B 4 ARG A 166 TYR A 167 0 SHEET 2 B 4 ASP A 208 GLN A 216 -1 O TYR A 209 N TYR A 167 SHEET 3 B 4 TYR A 387 ASP A 393 1 O THR A 388 N VAL A 213 SHEET 4 B 4 GLN A 377 TYR A 384 -1 N TYR A 384 O TYR A 387 SHEET 1 C 3 LEU A 251 PRO A 253 0 SHEET 2 C 3 THR A 337 HIS A 340 -1 O ARG A 339 N ILE A 252 SHEET 3 C 3 ALA A 272 MET A 273 1 N ALA A 272 O THR A 338 SSBOND 1 CYS A 130 CYS A 172 1555 1555 2.04 SSBOND 2 CYS A 243 CYS A 262 1555 1555 2.03 LINK OD2 ASP A 250 MN MN A 402 1555 1555 2.18 LINK NE2 HIS A 340 MN MN A 402 1555 1555 2.32 LINK NE2 HIS A 343 MN MN A 402 1555 1555 2.07 LINK MN MN A 402 O1A UDP A 403 1555 1555 2.23 LINK MN MN A 402 O HOH A 561 1555 1555 2.02 LINK MN MN A 402 O HOH A 699 1555 1555 2.43 SITE 1 AC1 6 ASP A 250 HIS A 340 HIS A 343 UDP A 403 SITE 2 AC1 6 HOH A 561 HOH A 699 SITE 1 AC2 14 PRO A 183 PHE A 184 ARG A 185 ARG A 187 SITE 2 AC2 14 PHE A 222 ASP A 248 VAL A 249 ASP A 250 SITE 3 AC2 14 HIS A 343 MN A 402 HOH A 561 HOH A 652 SITE 4 AC2 14 HOH A 666 HOH A 788 CRYST1 70.560 137.730 66.430 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014172 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007261 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015053 0.00000