HEADER DNA BINDING PROTEIN 09-FEB-06 2FZ4 TITLE CRYSTAL STRUCTURE OF THE N-TERMINAL HALF OF ARCHAEOGLOBUS FULGIDUS XPB COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA REPAIR PROTEIN RAD25; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL HALF; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 224325; SOURCE 4 STRAIN: DSM 4304; SOURCE 5 GENE: RAD25; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS RECA-LIKE DOMAIN, DNA DAMAGE RECOGNITION DOMAIN, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.FAN,J.A.TAINER REVDAT 4 14-FEB-24 2FZ4 1 SEQADV REVDAT 3 13-JUL-11 2FZ4 1 VERSN REVDAT 2 24-FEB-09 2FZ4 1 VERSN REVDAT 1 18-APR-06 2FZ4 0 JRNL AUTH L.FAN,A.S.ARVAI,P.K.COOPER,S.IWAI,F.HANAOKA,J.A.TAINER JRNL TITL CONSERVED XPB CORE STRUCTURE AND MOTIFS FOR DNA UNWINDING: JRNL TITL 2 IMPLICATIONS FOR PATHWAY SELECTION OF TRANSCRIPTION OR JRNL TITL 3 EXCISION REPAIR. JRNL REF MOL.CELL V. 22 27 2006 JRNL REFN ISSN 1097-2765 JRNL PMID 16600867 JRNL DOI 10.1016/J.MOLCEL.2006.02.017 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 10478 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 549 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1643 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 39 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2FZ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-FEB-06. REMARK 100 THE DEPOSITION ID IS D_1000036484. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-02; 24-JUN-02 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 5.2 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SSRL; ALS REMARK 200 BEAMLINE : BL11-1; 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9800; 0.9780, 0.9795, 0.9796 REMARK 200 MONOCHROMATOR : SI(111); SI(111) REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; ADSC QUANTUM REMARK 200 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10811 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 19.90 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 40.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 17.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.59300 REMARK 200 FOR SHELL : 6.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM CITRATE, 1.0 M LICL., PH REMARK 280 5.2, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 58.80000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 58.80000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 58.80000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 58.80000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 58.80000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 58.80000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 58.80000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 58.80000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 58.80000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 58.80000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 58.80000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 58.80000 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 58.80000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 58.80000 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 58.80000 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 58.80000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 58.80000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 58.80000 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 58.80000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 58.80000 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 58.80000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 58.80000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 58.80000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 58.80000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 58.80000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 58.80000 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 58.80000 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 58.80000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 58.80000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 58.80000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 58.80000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 58.80000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 58.80000 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 58.80000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 58.80000 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 58.80000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 LEU A 14 REMARK 465 VAL A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 HIS A 20 REMARK 465 MET A 21 REMARK 465 GLN A 22 REMARK 465 MET A 23 REMARK 465 ARG A 230 REMARK 465 GLU A 231 REMARK 465 ASP A 232 REMARK 465 GLY A 233 REMARK 465 ARG A 234 REMARK 465 HIS A 235 REMARK 465 GLU A 236 REMARK 465 ILE A 237 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 169 O HOH A 307 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 43 C - N - CA ANGL. DEV. = 9.0 DEGREES REMARK 500 PRO A 82 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 30 137.67 -174.68 REMARK 500 ASP A 39 120.84 -27.16 REMARK 500 ASP A 89 69.36 -152.31 REMARK 500 GLU A 91 91.72 -68.63 REMARK 500 ARG A 110 72.65 -153.46 REMARK 500 THR A 117 -119.47 -51.56 REMARK 500 THR A 142 137.50 55.92 REMARK 500 LYS A 150 -74.50 -51.74 REMARK 500 GLU A 151 85.84 -68.32 REMARK 500 ARG A 152 -27.12 168.40 REMARK 500 ILE A 155 26.93 -72.73 REMARK 500 ASP A 180 -70.08 -62.93 REMARK 500 HIS A 203 144.42 74.09 REMARK 500 PRO A 205 142.67 -32.67 REMARK 500 SER A 208 -63.49 -99.94 REMARK 500 ALA A 218 108.34 -34.78 REMARK 500 REMARK 500 REMARK: NULL DBREF 2FZ4 A 21 237 UNP O29889 O29889_ARCFU 1 217 SEQADV 2FZ4 MET A 1 UNP O29889 EXPRESSION TAG SEQADV 2FZ4 GLY A 2 UNP O29889 EXPRESSION TAG SEQADV 2FZ4 SER A 3 UNP O29889 EXPRESSION TAG SEQADV 2FZ4 SER A 4 UNP O29889 EXPRESSION TAG SEQADV 2FZ4 HIS A 5 UNP O29889 EXPRESSION TAG SEQADV 2FZ4 HIS A 6 UNP O29889 EXPRESSION TAG SEQADV 2FZ4 HIS A 7 UNP O29889 EXPRESSION TAG SEQADV 2FZ4 HIS A 8 UNP O29889 EXPRESSION TAG SEQADV 2FZ4 HIS A 9 UNP O29889 EXPRESSION TAG SEQADV 2FZ4 HIS A 10 UNP O29889 EXPRESSION TAG SEQADV 2FZ4 SER A 11 UNP O29889 CLONING ARTIFACT SEQADV 2FZ4 SER A 12 UNP O29889 CLONING ARTIFACT SEQADV 2FZ4 GLY A 13 UNP O29889 CLONING ARTIFACT SEQADV 2FZ4 LEU A 14 UNP O29889 CLONING ARTIFACT SEQADV 2FZ4 VAL A 15 UNP O29889 CLONING ARTIFACT SEQADV 2FZ4 PRO A 16 UNP O29889 CLONING ARTIFACT SEQADV 2FZ4 ARG A 17 UNP O29889 CLONING ARTIFACT SEQADV 2FZ4 GLY A 18 UNP O29889 CLONING ARTIFACT SEQADV 2FZ4 SER A 19 UNP O29889 CLONING ARTIFACT SEQADV 2FZ4 HIS A 20 UNP O29889 CLONING ARTIFACT SEQRES 1 A 237 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 237 LEU VAL PRO ARG GLY SER HIS MET GLN MET ILE ALA GLU SEQRES 3 A 237 ILE TYR TYR GLU ARG GLY THR ILE VAL VAL LYS GLY ASP SEQRES 4 A 237 ALA HIS VAL PRO HIS ALA LYS PHE ASP SER ARG SER GLY SEQRES 5 A 237 THR TYR ARG ALA LEU ALA PHE ARG TYR ARG ASP ILE ILE SEQRES 6 A 237 GLU TYR PHE GLU SER ASN GLY ILE GLU PHE VAL ASP ASN SEQRES 7 A 237 ALA ALA ASP PRO ILE PRO THR PRO TYR PHE ASP ALA GLU SEQRES 8 A 237 ILE SER LEU ARG ASP TYR GLN GLU LYS ALA LEU GLU ARG SEQRES 9 A 237 TRP LEU VAL ASP LYS ARG GLY CYS ILE VAL LEU PRO THR SEQRES 10 A 237 GLY SER GLY LYS THR HIS VAL ALA MET ALA ALA ILE ASN SEQRES 11 A 237 GLU LEU SER THR PRO THR LEU ILE VAL VAL PRO THR LEU SEQRES 12 A 237 ALA LEU ALA GLU GLN TRP LYS GLU ARG LEU GLY ILE PHE SEQRES 13 A 237 GLY GLU GLU TYR VAL GLY GLU PHE SER GLY ARG ILE LYS SEQRES 14 A 237 GLU LEU LYS PRO LEU THR VAL SER THR TYR ASP SER ALA SEQRES 15 A 237 TYR VAL ASN ALA GLU LYS LEU GLY ASN ARG PHE MET LEU SEQRES 16 A 237 LEU ILE PHE ASP GLU VAL HIS HIS LEU PRO ALA GLU SER SEQRES 17 A 237 TYR VAL GLN ILE ALA GLN MET SER ILE ALA PRO PHE ARG SEQRES 18 A 237 LEU GLY LEU THR ALA THR PHE GLU ARG GLU ASP GLY ARG SEQRES 19 A 237 HIS GLU ILE FORMUL 2 HOH *39(H2 O) HELIX 1 1 ARG A 60 ASN A 71 1 12 HELIX 2 2 ARG A 95 LEU A 106 1 12 HELIX 3 3 GLY A 120 LEU A 132 1 13 HELIX 4 4 THR A 142 GLU A 151 1 10 HELIX 5 5 LEU A 153 GLU A 159 5 7 HELIX 6 6 TYR A 179 ASN A 185 1 7 HELIX 7 7 ASN A 185 GLY A 190 1 6 HELIX 8 8 SER A 208 MET A 215 1 8 SHEET 1 A 5 LYS A 46 ASP A 48 0 SHEET 2 A 5 THR A 53 LEU A 57 -1 O THR A 53 N ASP A 48 SHEET 3 A 5 THR A 33 LYS A 37 -1 N ILE A 34 O ALA A 56 SHEET 4 A 5 ALA A 25 GLU A 30 -1 N TYR A 28 O VAL A 35 SHEET 5 A 5 PHE A 75 ASN A 78 1 O ASN A 78 N ILE A 27 SHEET 1 B 6 ARG A 110 LEU A 115 0 SHEET 2 B 6 PHE A 220 ALA A 226 1 O THR A 225 N LEU A 115 SHEET 3 B 6 LEU A 195 ASP A 199 1 N LEU A 196 O PHE A 220 SHEET 4 B 6 THR A 136 VAL A 140 1 N LEU A 137 O ILE A 197 SHEET 5 B 6 LEU A 174 THR A 178 1 O SER A 177 N ILE A 138 SHEET 6 B 6 VAL A 161 PHE A 164 1 N GLY A 162 O LEU A 174 CRYST1 117.600 117.600 117.600 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008503 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008503 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008503 0.00000