HEADER LYASE 14-FEB-06 2G1I OBSLTE 27-JAN-09 2G1I 2VK4 TITLE CRYSTAL STRUCTURE OF PYRUVATE DECARBOXYLASE FROM TITLE 2 KLUYVEROMYCES LACTIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PYRUVATE DECARBOXYLASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 4.1.1.1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLUYVEROMYCES LACTIS; SOURCE 3 ORGANISM_TAXID: 28985 KEYWDS DIMER OF DIMERS, ASYMMETRIC ACTIVE SITES, SUBSTRATE KEYWDS 2 ACTIVATION, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR S.KUTTER,G.WILLE,S.RELLE,M.S.WEISS,G.HUBNER,S.KONIG REVDAT 2 27-JAN-09 2G1I 1 OBSLTE REVDAT 1 12-SEP-06 2G1I 0 JRNL AUTH S.KUTTER,G.WILLE,S.RELLE,M.S.WEISS,G.HUBNER,S.KONIG JRNL TITL THE CRYSTAL STRUCTURE OF PYRUVATE DECARBOXYLASE JRNL TITL 2 FROM KLUYVEROMYCES LACTIS JRNL REF FEBS J. V. 273 4199 2006 JRNL REFN ISSN 1742-464X JRNL PMID 16939618 JRNL DOI 10.1111/J.1742-4658.2006.05415.X REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.26 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.26 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 114796 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1161 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.26 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.32 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8035 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.27 REMARK 3 BIN R VALUE (WORKING SET) : 0.1630 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 16776 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 108 REMARK 3 SOLVENT ATOMS : 1582 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.05000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : 0.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.245 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.197 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.126 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.902 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 17239 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 23480 ; 1.477 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 2164 ; 5.971 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 735 ;37.141 ;24.939 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2831 ;15.788 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 72 ;18.318 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2705 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 12966 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 8731 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 11830 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 1628 ; 0.150 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.009 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 31 ; 0.128 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 27 ; 0.156 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 11123 ; 0.795 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 17499 ; 1.338 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 6990 ; 2.246 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 5981 ; 3.462 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 2G1I COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-FEB-06. REMARK 100 THE RCSB ID CODE IS RCSB036570. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAY-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.45 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8125 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 114899 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.260 REMARK 200 RESOLUTION RANGE LOW (A) : 23.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.26 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.21500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1PVD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG2000, 10% PEG8000, 5MM REMARK 280 THIAMIN DIPHOSPHATE, 5MM MAGNESIUM SULFATE, PH 6.45, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 281K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 101.54500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 106 REMARK 465 GLN A 107 REMARK 465 ALA A 108 REMARK 465 LYS A 109 REMARK 465 GLN A 110 REMARK 465 LEU A 111 REMARK 465 LEU A 112 REMARK 465 LEU A 113 REMARK 465 SER A 290 REMARK 465 ASP A 291 REMARK 465 PHE A 292 REMARK 465 ASN A 293 REMARK 465 THR A 294 REMARK 465 GLY A 295 REMARK 465 SER A 296 REMARK 465 PHE A 297 REMARK 465 SER A 298 REMARK 465 TYR A 299 REMARK 465 SER A 300 REMARK 465 TYR A 301 REMARK 465 LYS A 302 REMARK 465 ASN A 563 REMARK 465 MET B 1 REMARK 465 SER B 105 REMARK 465 SER B 106 REMARK 465 GLN B 107 REMARK 465 ALA B 108 REMARK 465 LYS B 109 REMARK 465 GLN B 110 REMARK 465 LEU B 111 REMARK 465 LEU B 112 REMARK 465 LEU B 113 REMARK 465 LEU B 555 REMARK 465 THR B 556 REMARK 465 ALA B 557 REMARK 465 ALA B 558 REMARK 465 THR B 559 REMARK 465 ASN B 560 REMARK 465 ALA B 561 REMARK 465 LYS B 562 REMARK 465 ASN B 563 REMARK 465 MET C 1 REMARK 465 SER C 105 REMARK 465 SER C 106 REMARK 465 GLN C 107 REMARK 465 ALA C 108 REMARK 465 LYS C 109 REMARK 465 GLN C 110 REMARK 465 LEU C 111 REMARK 465 LEU C 112 REMARK 465 LEU C 113 REMARK 465 HIS C 114 REMARK 465 HIS C 115 REMARK 465 ALA C 557 REMARK 465 ALA C 558 REMARK 465 THR C 559 REMARK 465 ASN C 560 REMARK 465 ALA C 561 REMARK 465 LYS C 562 REMARK 465 ASN C 563 REMARK 465 MET D 1 REMARK 465 SER D 105 REMARK 465 SER D 106 REMARK 465 GLN D 107 REMARK 465 ALA D 108 REMARK 465 LYS D 109 REMARK 465 GLN D 110 REMARK 465 LEU D 111 REMARK 465 LEU D 112 REMARK 465 LEU D 113 REMARK 465 HIS D 114 REMARK 465 HIS D 115 REMARK 465 THR D 116 REMARK 465 LEU D 117 REMARK 465 GLY D 118 REMARK 465 ASN D 119 REMARK 465 GLY D 120 REMARK 465 ASN D 563 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN C 160 O HOH C 1021 2.09 REMARK 500 O HOH C 911 O HOH C 1022 2.18 REMARK 500 O ASP C 28 O HOH C 1022 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG C 532 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG C 532 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 121 101.94 -162.17 REMARK 500 ASP A 219 -168.72 -112.84 REMARK 500 LEU A 288 -45.23 -143.89 REMARK 500 ARG A 317 -114.22 53.51 REMARK 500 PRO A 346 96.92 -50.64 REMARK 500 ASP A 433 107.56 -164.84 REMARK 500 ARG B 317 -126.61 54.91 REMARK 500 ASP B 433 110.98 -165.02 REMARK 500 THR B 450 21.87 -140.06 REMARK 500 PHE C 74 127.31 -39.01 REMARK 500 ARG C 317 -116.39 54.76 REMARK 500 PRO C 346 109.55 -49.64 REMARK 500 ASP C 433 110.53 -163.71 REMARK 500 SER D 103 150.92 -45.34 REMARK 500 ASP D 219 -169.52 -108.42 REMARK 500 ASP D 226 69.09 25.24 REMARK 500 LEU D 289 71.31 -171.63 REMARK 500 ARG D 317 -123.60 51.00 REMARK 500 PRO D 348 153.30 -45.23 REMARK 500 ASP D 433 108.53 -165.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU D 288 LEU D 289 -143.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (11X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 VAL A 204 23.8 L L OUTSIDE RANGE REMARK 500 GLU D 210 24.0 L L OUTSIDE RANGE REMARK 500 ASP D 226 23.0 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 444 OD2 REMARK 620 2 ASN A 471 OD1 94.4 REMARK 620 3 GLY A 473 O 104.0 88.6 REMARK 620 4 TPP A 600 O1A 85.9 174.0 97.2 REMARK 620 5 TPP A 600 O3B 164.1 87.3 91.9 90.7 REMARK 620 6 HOH A 984 O 81.2 83.9 171.2 90.2 83.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 444 OD1 REMARK 620 2 ASN B 471 OD1 94.7 REMARK 620 3 GLY B 473 O 100.7 99.0 REMARK 620 4 TPP B 600 O1A 85.7 167.4 93.3 REMARK 620 5 TPP B 600 O3B 165.8 90.4 91.6 86.4 REMARK 620 6 HOH B 977 O 86.0 82.3 173.0 85.2 81.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 444 OD2 REMARK 620 2 ASN C 471 OD1 93.4 REMARK 620 3 GLY C 473 O 99.7 92.1 REMARK 620 4 TPP C 600 O1A 87.2 178.0 89.6 REMARK 620 5 TPP C 600 O3B 166.6 93.7 91.3 85.3 REMARK 620 6 HOH C1024 O 83.4 87.2 176.9 91.0 85.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 444 OD1 REMARK 620 2 ASN D 471 OD1 94.2 REMARK 620 3 GLY D 473 O 102.6 99.2 REMARK 620 4 TPP D 600 O1A 83.4 171.5 89.3 REMARK 620 5 TPP D 600 O3B 160.1 96.3 92.4 83.8 REMARK 620 6 HOH D 957 O 83.6 83.4 173.0 88.2 80.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 601 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 601 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 601 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 601 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TPP A 600 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TPP B 600 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TPP C 600 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TPP D 600 DBREF 2G1I A 1 563 UNP Q12629 PDC1_KLULA 1 563 DBREF 2G1I B 1 563 UNP Q12629 PDC1_KLULA 1 563 DBREF 2G1I C 1 563 UNP Q12629 PDC1_KLULA 1 563 DBREF 2G1I D 1 563 UNP Q12629 PDC1_KLULA 1 563 SEQRES 1 A 563 MET SER GLU ILE THR LEU GLY ARG TYR LEU PHE GLU ARG SEQRES 2 A 563 LEU LYS GLN VAL GLU VAL GLN THR ILE PHE GLY LEU PRO SEQRES 3 A 563 GLY ASP PHE ASN LEU SER LEU LEU ASP ASN ILE TYR GLU SEQRES 4 A 563 VAL PRO GLY MET ARG TRP ALA GLY ASN ALA ASN GLU LEU SEQRES 5 A 563 ASN ALA ALA TYR ALA ALA ASP GLY TYR ALA ARG LEU LYS SEQRES 6 A 563 GLY MET SER CYS ILE ILE THR THR PHE GLY VAL GLY GLU SEQRES 7 A 563 LEU SER ALA LEU ASN GLY ILE ALA GLY SER TYR ALA GLU SEQRES 8 A 563 HIS VAL GLY VAL LEU HIS VAL VAL GLY VAL PRO SER VAL SEQRES 9 A 563 SER SER GLN ALA LYS GLN LEU LEU LEU HIS HIS THR LEU SEQRES 10 A 563 GLY ASN GLY ASP PHE THR VAL PHE HIS ARG MET SER SER SEQRES 11 A 563 ASN ILE SER GLU THR THR ALA MET ILE THR ASP ILE ASN SEQRES 12 A 563 THR ALA PRO ALA GLU ILE ASP ARG CYS ILE ARG THR THR SEQRES 13 A 563 TYR VAL SER GLN ARG PRO VAL TYR LEU GLY LEU PRO ALA SEQRES 14 A 563 ASN LEU VAL ASP LEU THR VAL PRO ALA SER LEU LEU ASP SEQRES 15 A 563 THR PRO ILE ASP LEU SER LEU LYS PRO ASN ASP PRO GLU SEQRES 16 A 563 ALA GLU GLU GLU VAL ILE GLU ASN VAL LEU GLN LEU ILE SEQRES 17 A 563 LYS GLU ALA LYS ASN PRO VAL ILE LEU ALA ASP ALA CYS SEQRES 18 A 563 CYS SER ARG HIS ASP ALA LYS ALA GLU THR LYS LYS LEU SEQRES 19 A 563 ILE ASP LEU THR GLN PHE PRO ALA PHE VAL THR PRO MET SEQRES 20 A 563 GLY LYS GLY SER ILE ASP GLU LYS HIS PRO ARG PHE GLY SEQRES 21 A 563 GLY VAL TYR VAL GLY THR LEU SER SER PRO ALA VAL LYS SEQRES 22 A 563 GLU ALA VAL GLU SER ALA ASP LEU VAL LEU SER VAL GLY SEQRES 23 A 563 ALA LEU LEU SER ASP PHE ASN THR GLY SER PHE SER TYR SEQRES 24 A 563 SER TYR LYS THR LYS ASN ILE VAL GLU PHE HIS SER ASP SEQRES 25 A 563 TYR THR LYS ILE ARG SER ALA THR PHE PRO GLY VAL GLN SEQRES 26 A 563 MET LYS PHE ALA LEU GLN LYS LEU LEU THR LYS VAL ALA SEQRES 27 A 563 ASP ALA ALA LYS GLY TYR LYS PRO VAL PRO VAL PRO SER SEQRES 28 A 563 GLU PRO GLU HIS ASN GLU ALA VAL ALA ASP SER THR PRO SEQRES 29 A 563 LEU LYS GLN GLU TRP VAL TRP THR GLN VAL GLY GLU PHE SEQRES 30 A 563 LEU ARG GLU GLY ASP VAL VAL ILE THR GLU THR GLY THR SEQRES 31 A 563 SER ALA PHE GLY ILE ASN GLN THR HIS PHE PRO ASN ASN SEQRES 32 A 563 THR TYR GLY ILE SER GLN VAL LEU TRP GLY SER ILE GLY SEQRES 33 A 563 PHE THR THR GLY ALA THR LEU GLY ALA ALA PHE ALA ALA SEQRES 34 A 563 GLU GLU ILE ASP PRO LYS LYS ARG VAL ILE LEU PHE ILE SEQRES 35 A 563 GLY ASP GLY SER LEU GLN LEU THR VAL GLN GLU ILE SER SEQRES 36 A 563 THR MET ILE ARG TRP GLY LEU LYS PRO TYR LEU PHE VAL SEQRES 37 A 563 LEU ASN ASN ASP GLY TYR THR ILE GLU ARG LEU ILE HIS SEQRES 38 A 563 GLY GLU THR ALA GLN TYR ASN CYS ILE GLN ASN TRP GLN SEQRES 39 A 563 HIS LEU GLU LEU LEU PRO THR PHE GLY ALA LYS ASP TYR SEQRES 40 A 563 GLU ALA VAL ARG VAL SER THR THR GLY GLU TRP ASN LYS SEQRES 41 A 563 LEU THR THR ASP GLU LYS PHE GLN ASP ASN THR ARG ILE SEQRES 42 A 563 ARG LEU ILE GLU VAL MET LEU PRO THR MET ASP ALA PRO SEQRES 43 A 563 SER ASN LEU VAL LYS GLN ALA GLN LEU THR ALA ALA THR SEQRES 44 A 563 ASN ALA LYS ASN SEQRES 1 B 563 MET SER GLU ILE THR LEU GLY ARG TYR LEU PHE GLU ARG SEQRES 2 B 563 LEU LYS GLN VAL GLU VAL GLN THR ILE PHE GLY LEU PRO SEQRES 3 B 563 GLY ASP PHE ASN LEU SER LEU LEU ASP ASN ILE TYR GLU SEQRES 4 B 563 VAL PRO GLY MET ARG TRP ALA GLY ASN ALA ASN GLU LEU SEQRES 5 B 563 ASN ALA ALA TYR ALA ALA ASP GLY TYR ALA ARG LEU LYS SEQRES 6 B 563 GLY MET SER CYS ILE ILE THR THR PHE GLY VAL GLY GLU SEQRES 7 B 563 LEU SER ALA LEU ASN GLY ILE ALA GLY SER TYR ALA GLU SEQRES 8 B 563 HIS VAL GLY VAL LEU HIS VAL VAL GLY VAL PRO SER VAL SEQRES 9 B 563 SER SER GLN ALA LYS GLN LEU LEU LEU HIS HIS THR LEU SEQRES 10 B 563 GLY ASN GLY ASP PHE THR VAL PHE HIS ARG MET SER SER SEQRES 11 B 563 ASN ILE SER GLU THR THR ALA MET ILE THR ASP ILE ASN SEQRES 12 B 563 THR ALA PRO ALA GLU ILE ASP ARG CYS ILE ARG THR THR SEQRES 13 B 563 TYR VAL SER GLN ARG PRO VAL TYR LEU GLY LEU PRO ALA SEQRES 14 B 563 ASN LEU VAL ASP LEU THR VAL PRO ALA SER LEU LEU ASP SEQRES 15 B 563 THR PRO ILE ASP LEU SER LEU LYS PRO ASN ASP PRO GLU SEQRES 16 B 563 ALA GLU GLU GLU VAL ILE GLU ASN VAL LEU GLN LEU ILE SEQRES 17 B 563 LYS GLU ALA LYS ASN PRO VAL ILE LEU ALA ASP ALA CYS SEQRES 18 B 563 CYS SER ARG HIS ASP ALA LYS ALA GLU THR LYS LYS LEU SEQRES 19 B 563 ILE ASP LEU THR GLN PHE PRO ALA PHE VAL THR PRO MET SEQRES 20 B 563 GLY LYS GLY SER ILE ASP GLU LYS HIS PRO ARG PHE GLY SEQRES 21 B 563 GLY VAL TYR VAL GLY THR LEU SER SER PRO ALA VAL LYS SEQRES 22 B 563 GLU ALA VAL GLU SER ALA ASP LEU VAL LEU SER VAL GLY SEQRES 23 B 563 ALA LEU LEU SER ASP PHE ASN THR GLY SER PHE SER TYR SEQRES 24 B 563 SER TYR LYS THR LYS ASN ILE VAL GLU PHE HIS SER ASP SEQRES 25 B 563 TYR THR LYS ILE ARG SER ALA THR PHE PRO GLY VAL GLN SEQRES 26 B 563 MET LYS PHE ALA LEU GLN LYS LEU LEU THR LYS VAL ALA SEQRES 27 B 563 ASP ALA ALA LYS GLY TYR LYS PRO VAL PRO VAL PRO SER SEQRES 28 B 563 GLU PRO GLU HIS ASN GLU ALA VAL ALA ASP SER THR PRO SEQRES 29 B 563 LEU LYS GLN GLU TRP VAL TRP THR GLN VAL GLY GLU PHE SEQRES 30 B 563 LEU ARG GLU GLY ASP VAL VAL ILE THR GLU THR GLY THR SEQRES 31 B 563 SER ALA PHE GLY ILE ASN GLN THR HIS PHE PRO ASN ASN SEQRES 32 B 563 THR TYR GLY ILE SER GLN VAL LEU TRP GLY SER ILE GLY SEQRES 33 B 563 PHE THR THR GLY ALA THR LEU GLY ALA ALA PHE ALA ALA SEQRES 34 B 563 GLU GLU ILE ASP PRO LYS LYS ARG VAL ILE LEU PHE ILE SEQRES 35 B 563 GLY ASP GLY SER LEU GLN LEU THR VAL GLN GLU ILE SER SEQRES 36 B 563 THR MET ILE ARG TRP GLY LEU LYS PRO TYR LEU PHE VAL SEQRES 37 B 563 LEU ASN ASN ASP GLY TYR THR ILE GLU ARG LEU ILE HIS SEQRES 38 B 563 GLY GLU THR ALA GLN TYR ASN CYS ILE GLN ASN TRP GLN SEQRES 39 B 563 HIS LEU GLU LEU LEU PRO THR PHE GLY ALA LYS ASP TYR SEQRES 40 B 563 GLU ALA VAL ARG VAL SER THR THR GLY GLU TRP ASN LYS SEQRES 41 B 563 LEU THR THR ASP GLU LYS PHE GLN ASP ASN THR ARG ILE SEQRES 42 B 563 ARG LEU ILE GLU VAL MET LEU PRO THR MET ASP ALA PRO SEQRES 43 B 563 SER ASN LEU VAL LYS GLN ALA GLN LEU THR ALA ALA THR SEQRES 44 B 563 ASN ALA LYS ASN SEQRES 1 C 563 MET SER GLU ILE THR LEU GLY ARG TYR LEU PHE GLU ARG SEQRES 2 C 563 LEU LYS GLN VAL GLU VAL GLN THR ILE PHE GLY LEU PRO SEQRES 3 C 563 GLY ASP PHE ASN LEU SER LEU LEU ASP ASN ILE TYR GLU SEQRES 4 C 563 VAL PRO GLY MET ARG TRP ALA GLY ASN ALA ASN GLU LEU SEQRES 5 C 563 ASN ALA ALA TYR ALA ALA ASP GLY TYR ALA ARG LEU LYS SEQRES 6 C 563 GLY MET SER CYS ILE ILE THR THR PHE GLY VAL GLY GLU SEQRES 7 C 563 LEU SER ALA LEU ASN GLY ILE ALA GLY SER TYR ALA GLU SEQRES 8 C 563 HIS VAL GLY VAL LEU HIS VAL VAL GLY VAL PRO SER VAL SEQRES 9 C 563 SER SER GLN ALA LYS GLN LEU LEU LEU HIS HIS THR LEU SEQRES 10 C 563 GLY ASN GLY ASP PHE THR VAL PHE HIS ARG MET SER SER SEQRES 11 C 563 ASN ILE SER GLU THR THR ALA MET ILE THR ASP ILE ASN SEQRES 12 C 563 THR ALA PRO ALA GLU ILE ASP ARG CYS ILE ARG THR THR SEQRES 13 C 563 TYR VAL SER GLN ARG PRO VAL TYR LEU GLY LEU PRO ALA SEQRES 14 C 563 ASN LEU VAL ASP LEU THR VAL PRO ALA SER LEU LEU ASP SEQRES 15 C 563 THR PRO ILE ASP LEU SER LEU LYS PRO ASN ASP PRO GLU SEQRES 16 C 563 ALA GLU GLU GLU VAL ILE GLU ASN VAL LEU GLN LEU ILE SEQRES 17 C 563 LYS GLU ALA LYS ASN PRO VAL ILE LEU ALA ASP ALA CYS SEQRES 18 C 563 CYS SER ARG HIS ASP ALA LYS ALA GLU THR LYS LYS LEU SEQRES 19 C 563 ILE ASP LEU THR GLN PHE PRO ALA PHE VAL THR PRO MET SEQRES 20 C 563 GLY LYS GLY SER ILE ASP GLU LYS HIS PRO ARG PHE GLY SEQRES 21 C 563 GLY VAL TYR VAL GLY THR LEU SER SER PRO ALA VAL LYS SEQRES 22 C 563 GLU ALA VAL GLU SER ALA ASP LEU VAL LEU SER VAL GLY SEQRES 23 C 563 ALA LEU LEU SER ASP PHE ASN THR GLY SER PHE SER TYR SEQRES 24 C 563 SER TYR LYS THR LYS ASN ILE VAL GLU PHE HIS SER ASP SEQRES 25 C 563 TYR THR LYS ILE ARG SER ALA THR PHE PRO GLY VAL GLN SEQRES 26 C 563 MET LYS PHE ALA LEU GLN LYS LEU LEU THR LYS VAL ALA SEQRES 27 C 563 ASP ALA ALA LYS GLY TYR LYS PRO VAL PRO VAL PRO SER SEQRES 28 C 563 GLU PRO GLU HIS ASN GLU ALA VAL ALA ASP SER THR PRO SEQRES 29 C 563 LEU LYS GLN GLU TRP VAL TRP THR GLN VAL GLY GLU PHE SEQRES 30 C 563 LEU ARG GLU GLY ASP VAL VAL ILE THR GLU THR GLY THR SEQRES 31 C 563 SER ALA PHE GLY ILE ASN GLN THR HIS PHE PRO ASN ASN SEQRES 32 C 563 THR TYR GLY ILE SER GLN VAL LEU TRP GLY SER ILE GLY SEQRES 33 C 563 PHE THR THR GLY ALA THR LEU GLY ALA ALA PHE ALA ALA SEQRES 34 C 563 GLU GLU ILE ASP PRO LYS LYS ARG VAL ILE LEU PHE ILE SEQRES 35 C 563 GLY ASP GLY SER LEU GLN LEU THR VAL GLN GLU ILE SER SEQRES 36 C 563 THR MET ILE ARG TRP GLY LEU LYS PRO TYR LEU PHE VAL SEQRES 37 C 563 LEU ASN ASN ASP GLY TYR THR ILE GLU ARG LEU ILE HIS SEQRES 38 C 563 GLY GLU THR ALA GLN TYR ASN CYS ILE GLN ASN TRP GLN SEQRES 39 C 563 HIS LEU GLU LEU LEU PRO THR PHE GLY ALA LYS ASP TYR SEQRES 40 C 563 GLU ALA VAL ARG VAL SER THR THR GLY GLU TRP ASN LYS SEQRES 41 C 563 LEU THR THR ASP GLU LYS PHE GLN ASP ASN THR ARG ILE SEQRES 42 C 563 ARG LEU ILE GLU VAL MET LEU PRO THR MET ASP ALA PRO SEQRES 43 C 563 SER ASN LEU VAL LYS GLN ALA GLN LEU THR ALA ALA THR SEQRES 44 C 563 ASN ALA LYS ASN SEQRES 1 D 563 MET SER GLU ILE THR LEU GLY ARG TYR LEU PHE GLU ARG SEQRES 2 D 563 LEU LYS GLN VAL GLU VAL GLN THR ILE PHE GLY LEU PRO SEQRES 3 D 563 GLY ASP PHE ASN LEU SER LEU LEU ASP ASN ILE TYR GLU SEQRES 4 D 563 VAL PRO GLY MET ARG TRP ALA GLY ASN ALA ASN GLU LEU SEQRES 5 D 563 ASN ALA ALA TYR ALA ALA ASP GLY TYR ALA ARG LEU LYS SEQRES 6 D 563 GLY MET SER CYS ILE ILE THR THR PHE GLY VAL GLY GLU SEQRES 7 D 563 LEU SER ALA LEU ASN GLY ILE ALA GLY SER TYR ALA GLU SEQRES 8 D 563 HIS VAL GLY VAL LEU HIS VAL VAL GLY VAL PRO SER VAL SEQRES 9 D 563 SER SER GLN ALA LYS GLN LEU LEU LEU HIS HIS THR LEU SEQRES 10 D 563 GLY ASN GLY ASP PHE THR VAL PHE HIS ARG MET SER SER SEQRES 11 D 563 ASN ILE SER GLU THR THR ALA MET ILE THR ASP ILE ASN SEQRES 12 D 563 THR ALA PRO ALA GLU ILE ASP ARG CYS ILE ARG THR THR SEQRES 13 D 563 TYR VAL SER GLN ARG PRO VAL TYR LEU GLY LEU PRO ALA SEQRES 14 D 563 ASN LEU VAL ASP LEU THR VAL PRO ALA SER LEU LEU ASP SEQRES 15 D 563 THR PRO ILE ASP LEU SER LEU LYS PRO ASN ASP PRO GLU SEQRES 16 D 563 ALA GLU GLU GLU VAL ILE GLU ASN VAL LEU GLN LEU ILE SEQRES 17 D 563 LYS GLU ALA LYS ASN PRO VAL ILE LEU ALA ASP ALA CYS SEQRES 18 D 563 CYS SER ARG HIS ASP ALA LYS ALA GLU THR LYS LYS LEU SEQRES 19 D 563 ILE ASP LEU THR GLN PHE PRO ALA PHE VAL THR PRO MET SEQRES 20 D 563 GLY LYS GLY SER ILE ASP GLU LYS HIS PRO ARG PHE GLY SEQRES 21 D 563 GLY VAL TYR VAL GLY THR LEU SER SER PRO ALA VAL LYS SEQRES 22 D 563 GLU ALA VAL GLU SER ALA ASP LEU VAL LEU SER VAL GLY SEQRES 23 D 563 ALA LEU LEU SER ASP PHE ASN THR GLY SER PHE SER TYR SEQRES 24 D 563 SER TYR LYS THR LYS ASN ILE VAL GLU PHE HIS SER ASP SEQRES 25 D 563 TYR THR LYS ILE ARG SER ALA THR PHE PRO GLY VAL GLN SEQRES 26 D 563 MET LYS PHE ALA LEU GLN LYS LEU LEU THR LYS VAL ALA SEQRES 27 D 563 ASP ALA ALA LYS GLY TYR LYS PRO VAL PRO VAL PRO SER SEQRES 28 D 563 GLU PRO GLU HIS ASN GLU ALA VAL ALA ASP SER THR PRO SEQRES 29 D 563 LEU LYS GLN GLU TRP VAL TRP THR GLN VAL GLY GLU PHE SEQRES 30 D 563 LEU ARG GLU GLY ASP VAL VAL ILE THR GLU THR GLY THR SEQRES 31 D 563 SER ALA PHE GLY ILE ASN GLN THR HIS PHE PRO ASN ASN SEQRES 32 D 563 THR TYR GLY ILE SER GLN VAL LEU TRP GLY SER ILE GLY SEQRES 33 D 563 PHE THR THR GLY ALA THR LEU GLY ALA ALA PHE ALA ALA SEQRES 34 D 563 GLU GLU ILE ASP PRO LYS LYS ARG VAL ILE LEU PHE ILE SEQRES 35 D 563 GLY ASP GLY SER LEU GLN LEU THR VAL GLN GLU ILE SER SEQRES 36 D 563 THR MET ILE ARG TRP GLY LEU LYS PRO TYR LEU PHE VAL SEQRES 37 D 563 LEU ASN ASN ASP GLY TYR THR ILE GLU ARG LEU ILE HIS SEQRES 38 D 563 GLY GLU THR ALA GLN TYR ASN CYS ILE GLN ASN TRP GLN SEQRES 39 D 563 HIS LEU GLU LEU LEU PRO THR PHE GLY ALA LYS ASP TYR SEQRES 40 D 563 GLU ALA VAL ARG VAL SER THR THR GLY GLU TRP ASN LYS SEQRES 41 D 563 LEU THR THR ASP GLU LYS PHE GLN ASP ASN THR ARG ILE SEQRES 42 D 563 ARG LEU ILE GLU VAL MET LEU PRO THR MET ASP ALA PRO SEQRES 43 D 563 SER ASN LEU VAL LYS GLN ALA GLN LEU THR ALA ALA THR SEQRES 44 D 563 ASN ALA LYS ASN HET MG A 601 1 HET MG B 601 1 HET MG C 601 1 HET MG D 601 1 HET TPP A 600 26 HET TPP B 600 26 HET TPP C 600 26 HET TPP D 600 26 HETNAM MG MAGNESIUM ION HETNAM TPP THIAMINE DIPHOSPHATE FORMUL 5 MG 4(MG 2+) FORMUL 9 TPP 4(C12 H19 N4 O7 P2 S 1+) FORMUL 13 HOH *1582(H2 O) HELIX 1 1 LEU A 6 VAL A 17 1 12 HELIX 2 2 ASN A 30 ASN A 36 1 7 HELIX 3 3 ILE A 37 VAL A 40 5 4 HELIX 4 4 ASN A 50 GLY A 66 1 17 HELIX 5 5 GLY A 75 HIS A 92 1 18 HELIX 6 6 THR A 123 ASN A 131 1 9 HELIX 7 7 THR A 144 GLN A 160 1 17 HELIX 8 8 ALA A 169 ASP A 173 1 5 HELIX 9 9 SER A 179 THR A 183 5 5 HELIX 10 10 ASP A 193 ALA A 211 1 19 HELIX 11 11 ALA A 220 HIS A 225 1 6 HELIX 12 12 ALA A 227 GLN A 239 1 13 HELIX 13 13 PRO A 246 LYS A 249 5 4 HELIX 14 14 VAL A 264 SER A 268 5 5 HELIX 15 15 SER A 269 SER A 278 1 10 HELIX 16 16 GLN A 325 ALA A 341 1 17 HELIX 17 17 LYS A 366 GLY A 375 1 10 HELIX 18 18 GLY A 389 ILE A 395 1 7 HELIX 19 19 ASN A 396 THR A 398 5 3 HELIX 20 20 GLY A 416 ASP A 433 1 18 HELIX 21 21 ASP A 444 VAL A 451 1 8 HELIX 22 22 GLN A 452 TRP A 460 1 9 HELIX 23 23 TYR A 474 HIS A 481 1 8 HELIX 24 24 ALA A 485 CYS A 489 5 5 HELIX 25 25 GLN A 494 LEU A 496 5 3 HELIX 26 26 GLU A 497 PHE A 502 1 6 HELIX 27 27 THR A 514 THR A 523 1 10 HELIX 28 28 PRO A 546 THR A 559 1 14 HELIX 29 29 LEU B 6 VAL B 17 1 12 HELIX 30 30 ASN B 30 ASP B 35 1 6 HELIX 31 31 ASN B 36 VAL B 40 5 5 HELIX 32 32 ASN B 50 GLY B 66 1 17 HELIX 33 33 GLY B 75 GLU B 91 1 17 HELIX 34 34 THR B 123 ASN B 131 1 9 HELIX 35 35 THR B 144 GLN B 160 1 17 HELIX 36 36 ALA B 169 ASP B 173 1 5 HELIX 37 37 SER B 179 THR B 183 5 5 HELIX 38 38 ASP B 193 ALA B 211 1 19 HELIX 39 39 ALA B 220 HIS B 225 1 6 HELIX 40 40 ALA B 227 GLN B 239 1 13 HELIX 41 41 VAL B 264 SER B 268 5 5 HELIX 42 42 SER B 269 SER B 278 1 10 HELIX 43 43 GLN B 325 LYS B 342 1 18 HELIX 44 44 LYS B 366 LEU B 378 1 13 HELIX 45 45 GLY B 389 ILE B 395 1 7 HELIX 46 46 ASN B 396 THR B 398 5 3 HELIX 47 47 GLY B 416 ASP B 433 1 18 HELIX 48 48 ASP B 444 THR B 450 1 7 HELIX 49 49 GLU B 453 TRP B 460 1 8 HELIX 50 50 TYR B 474 HIS B 481 1 8 HELIX 51 51 ALA B 485 CYS B 489 5 5 HELIX 52 52 GLN B 494 LEU B 496 5 3 HELIX 53 53 GLU B 497 PHE B 502 1 6 HELIX 54 54 THR B 514 THR B 523 1 10 HELIX 55 55 PRO B 546 GLN B 554 1 9 HELIX 56 56 LEU C 6 VAL C 17 1 12 HELIX 57 57 ASN C 30 ASN C 36 1 7 HELIX 58 58 ILE C 37 VAL C 40 5 4 HELIX 59 59 ASN C 50 GLY C 66 1 17 HELIX 60 60 GLY C 75 HIS C 92 1 18 HELIX 61 61 THR C 123 ASN C 131 1 9 HELIX 62 62 THR C 144 GLN C 160 1 17 HELIX 63 63 ALA C 169 ASP C 173 1 5 HELIX 64 64 SER C 179 THR C 183 5 5 HELIX 65 65 ASP C 193 ALA C 211 1 19 HELIX 66 66 ALA C 220 HIS C 225 1 6 HELIX 67 67 ALA C 227 GLN C 239 1 13 HELIX 68 68 PRO C 246 LYS C 249 5 4 HELIX 69 69 VAL C 264 SER C 268 5 5 HELIX 70 70 SER C 269 SER C 278 1 10 HELIX 71 71 GLN C 325 ALA C 341 1 17 HELIX 72 72 LYS C 366 VAL C 374 1 9 HELIX 73 73 GLY C 375 PHE C 377 5 3 HELIX 74 74 GLY C 389 ILE C 395 1 7 HELIX 75 75 ASN C 396 THR C 398 5 3 HELIX 76 76 GLY C 416 ASP C 433 1 18 HELIX 77 77 ASP C 444 VAL C 451 1 8 HELIX 78 78 GLN C 452 TRP C 460 1 9 HELIX 79 79 TYR C 474 HIS C 481 1 8 HELIX 80 80 ALA C 485 CYS C 489 5 5 HELIX 81 81 GLN C 494 LEU C 496 5 3 HELIX 82 82 GLU C 497 PHE C 502 1 6 HELIX 83 83 THR C 514 THR C 523 1 10 HELIX 84 84 PRO C 546 THR C 556 1 11 HELIX 85 85 LEU D 6 VAL D 17 1 12 HELIX 86 86 ASN D 30 ASN D 36 1 7 HELIX 87 87 ILE D 37 VAL D 40 5 4 HELIX 88 88 ASN D 50 GLY D 66 1 17 HELIX 89 89 GLY D 75 GLU D 91 1 17 HELIX 90 90 THR D 123 ASN D 131 1 9 HELIX 91 91 THR D 144 GLN D 160 1 17 HELIX 92 92 SER D 179 THR D 183 5 5 HELIX 93 93 ASP D 193 ALA D 211 1 19 HELIX 94 94 ALA D 220 HIS D 225 1 6 HELIX 95 95 ALA D 227 GLN D 239 1 13 HELIX 96 96 PRO D 246 LYS D 249 5 4 HELIX 97 97 VAL D 264 SER D 268 5 5 HELIX 98 98 SER D 269 SER D 278 1 10 HELIX 99 99 GLN D 325 ALA D 341 1 17 HELIX 100 100 LYS D 366 LEU D 378 1 13 HELIX 101 101 GLY D 389 ILE D 395 1 7 HELIX 102 102 ASN D 396 THR D 398 5 3 HELIX 103 103 GLY D 416 ASP D 433 1 18 HELIX 104 104 ASP D 444 VAL D 451 1 8 HELIX 105 105 GLU D 453 TRP D 460 1 8 HELIX 106 106 TYR D 474 HIS D 481 1 8 HELIX 107 107 ALA D 485 CYS D 489 5 5 HELIX 108 108 GLN D 494 LEU D 496 5 3 HELIX 109 109 GLU D 497 PHE D 502 1 6 HELIX 110 110 THR D 514 THR D 523 1 10 HELIX 111 111 PRO D 546 THR D 559 1 14 SHEET 1 A 2 GLU A 3 THR A 5 0 SHEET 2 A 2 THR A 175 PRO A 177 -1 O VAL A 176 N ILE A 4 SHEET 1 B 6 ARG A 44 TRP A 45 0 SHEET 2 B 6 THR A 21 GLY A 24 1 N ILE A 22 O ARG A 44 SHEET 3 B 6 SER A 68 THR A 73 1 O ILE A 71 N PHE A 23 SHEET 4 B 6 VAL A 95 VAL A 101 1 O VAL A 98 N ILE A 70 SHEET 5 B 6 VAL A 163 PRO A 168 1 O LEU A 167 N VAL A 99 SHEET 6 B 6 THR A 135 MET A 138 1 N ALA A 137 O GLY A 166 SHEET 1 C 7 PHE A 259 VAL A 262 0 SHEET 2 C 7 ALA A 242 VAL A 244 1 N ALA A 242 O GLY A 260 SHEET 3 C 7 PRO A 214 ALA A 218 1 N ALA A 218 O PHE A 243 SHEET 4 C 7 LEU A 281 VAL A 285 1 O LEU A 283 N VAL A 215 SHEET 5 C 7 ILE A 306 PHE A 309 1 O PHE A 309 N SER A 284 SHEET 6 C 7 TYR A 313 ILE A 316 -1 O LYS A 315 N GLU A 308 SHEET 7 C 7 ALA A 319 PRO A 322 -1 O PHE A 321 N THR A 314 SHEET 1 D 6 TYR A 405 ILE A 407 0 SHEET 2 D 6 VAL A 383 THR A 386 1 N VAL A 384 O ILE A 407 SHEET 3 D 6 VAL A 438 GLY A 443 1 O ILE A 439 N VAL A 383 SHEET 4 D 6 TYR A 465 ASN A 470 1 O TYR A 465 N LEU A 440 SHEET 5 D 6 ILE A 533 MET A 539 1 O VAL A 538 N VAL A 468 SHEET 6 D 6 TYR A 507 VAL A 512 1 N VAL A 510 O GLU A 537 SHEET 1 E 2 GLU B 3 THR B 5 0 SHEET 2 E 2 THR B 175 PRO B 177 -1 O VAL B 176 N ILE B 4 SHEET 1 F 6 ARG B 44 TRP B 45 0 SHEET 2 F 6 THR B 21 GLY B 24 1 N ILE B 22 O ARG B 44 SHEET 3 F 6 SER B 68 THR B 73 1 O ILE B 71 N PHE B 23 SHEET 4 F 6 VAL B 95 VAL B 101 1 O VAL B 98 N ILE B 70 SHEET 5 F 6 VAL B 163 PRO B 168 1 O LEU B 167 N VAL B 99 SHEET 6 F 6 THR B 135 MET B 138 1 N ALA B 137 O GLY B 166 SHEET 1 G 7 PHE B 259 VAL B 262 0 SHEET 2 G 7 ALA B 242 VAL B 244 1 N ALA B 242 O GLY B 260 SHEET 3 G 7 PRO B 214 ALA B 218 1 N ALA B 218 O PHE B 243 SHEET 4 G 7 LEU B 281 VAL B 285 1 O VAL B 285 N LEU B 217 SHEET 5 G 7 ILE B 306 PHE B 309 1 O VAL B 307 N SER B 284 SHEET 6 G 7 TYR B 313 ILE B 316 -1 O LYS B 315 N GLU B 308 SHEET 7 G 7 ALA B 319 PRO B 322 -1 O PHE B 321 N THR B 314 SHEET 1 H 2 PHE B 292 ASN B 293 0 SHEET 2 H 2 SER B 298 TYR B 299 -1 O TYR B 299 N PHE B 292 SHEET 1 I 6 TYR B 405 SER B 408 0 SHEET 2 I 6 VAL B 383 THR B 386 1 N VAL B 384 O ILE B 407 SHEET 3 I 6 VAL B 438 GLY B 443 1 O ILE B 439 N ILE B 385 SHEET 4 I 6 TYR B 465 ASN B 470 1 O TYR B 465 N LEU B 440 SHEET 5 I 6 ILE B 533 MET B 539 1 O ILE B 536 N LEU B 466 SHEET 6 I 6 TYR B 507 VAL B 512 1 N VAL B 512 O GLU B 537 SHEET 1 J 2 GLU C 3 THR C 5 0 SHEET 2 J 2 THR C 175 PRO C 177 -1 O VAL C 176 N ILE C 4 SHEET 1 K 6 ARG C 44 TRP C 45 0 SHEET 2 K 6 THR C 21 GLY C 24 1 N ILE C 22 O ARG C 44 SHEET 3 K 6 SER C 68 THR C 73 1 O ILE C 71 N PHE C 23 SHEET 4 K 6 VAL C 95 VAL C 101 1 O VAL C 98 N ILE C 70 SHEET 5 K 6 VAL C 163 PRO C 168 1 O VAL C 163 N HIS C 97 SHEET 6 K 6 THR C 135 MET C 138 1 N ALA C 137 O GLY C 166 SHEET 1 L 7 PHE C 259 VAL C 262 0 SHEET 2 L 7 ALA C 242 VAL C 244 1 N ALA C 242 O GLY C 260 SHEET 3 L 7 PRO C 214 ALA C 218 1 N ALA C 218 O PHE C 243 SHEET 4 L 7 LEU C 281 VAL C 285 1 O LEU C 283 N VAL C 215 SHEET 5 L 7 ILE C 306 PHE C 309 1 O PHE C 309 N SER C 284 SHEET 6 L 7 TYR C 313 ILE C 316 -1 O LYS C 315 N GLU C 308 SHEET 7 L 7 ALA C 319 PRO C 322 -1 O PHE C 321 N THR C 314 SHEET 1 M 2 PHE C 292 ASN C 293 0 SHEET 2 M 2 SER C 298 TYR C 299 -1 O TYR C 299 N PHE C 292 SHEET 1 N 6 TYR C 405 SER C 408 0 SHEET 2 N 6 VAL C 383 THR C 386 1 N VAL C 384 O ILE C 407 SHEET 3 N 6 VAL C 438 GLY C 443 1 O ILE C 439 N VAL C 383 SHEET 4 N 6 TYR C 465 ASN C 470 1 O TYR C 465 N LEU C 440 SHEET 5 N 6 ILE C 533 MET C 539 1 O VAL C 538 N VAL C 468 SHEET 6 N 6 TYR C 507 VAL C 512 1 N VAL C 510 O GLU C 537 SHEET 1 O 2 GLU D 3 THR D 5 0 SHEET 2 O 2 THR D 175 PRO D 177 -1 O VAL D 176 N ILE D 4 SHEET 1 P 6 ARG D 44 TRP D 45 0 SHEET 2 P 6 THR D 21 GLY D 24 1 N ILE D 22 O ARG D 44 SHEET 3 P 6 SER D 68 THR D 73 1 O ILE D 71 N PHE D 23 SHEET 4 P 6 VAL D 95 VAL D 101 1 O VAL D 98 N ILE D 70 SHEET 5 P 6 VAL D 163 PRO D 168 1 O VAL D 163 N HIS D 97 SHEET 6 P 6 THR D 135 MET D 138 1 N ALA D 137 O GLY D 166 SHEET 1 Q 7 PHE D 259 VAL D 262 0 SHEET 2 Q 7 ALA D 242 VAL D 244 1 N ALA D 242 O GLY D 260 SHEET 3 Q 7 PRO D 214 ALA D 218 1 N ILE D 216 O PHE D 243 SHEET 4 Q 7 LEU D 281 VAL D 285 1 O VAL D 285 N LEU D 217 SHEET 5 Q 7 ILE D 306 PHE D 309 1 O PHE D 309 N SER D 284 SHEET 6 Q 7 TYR D 313 ILE D 316 -1 O LYS D 315 N GLU D 308 SHEET 7 Q 7 ALA D 319 PRO D 322 -1 O PHE D 321 N THR D 314 SHEET 1 R 2 PHE D 292 ASN D 293 0 SHEET 2 R 2 SER D 298 TYR D 299 -1 O TYR D 299 N PHE D 292 SHEET 1 S 6 TYR D 405 SER D 408 0 SHEET 2 S 6 VAL D 383 THR D 386 1 N VAL D 384 O ILE D 407 SHEET 3 S 6 VAL D 438 GLY D 443 1 O ILE D 439 N ILE D 385 SHEET 4 S 6 TYR D 465 ASN D 470 1 O TYR D 465 N LEU D 440 SHEET 5 S 6 ILE D 533 MET D 539 1 O VAL D 538 N VAL D 468 SHEET 6 S 6 TYR D 507 VAL D 512 1 N VAL D 510 O GLU D 537 LINK MG MG A 601 OD2 ASP A 444 1555 1555 2.05 LINK MG MG A 601 OD1 ASN A 471 1555 1555 2.17 LINK MG MG A 601 O GLY A 473 1555 1555 2.03 LINK MG MG A 601 O1A TPP A 600 1555 1555 2.07 LINK MG MG A 601 O3B TPP A 600 1555 1555 2.08 LINK MG MG B 601 OD1 ASP B 444 1555 1555 2.01 LINK MG MG B 601 OD1 ASN B 471 1555 1555 2.04 LINK MG MG B 601 O GLY B 473 1555 1555 2.00 LINK MG MG B 601 O1A TPP B 600 1555 1555 2.12 LINK MG MG B 601 O3B TPP B 600 1555 1555 2.18 LINK MG MG C 601 OD2 ASP C 444 1555 1555 2.07 LINK MG MG C 601 OD1 ASN C 471 1555 1555 2.09 LINK MG MG C 601 O GLY C 473 1555 1555 2.04 LINK MG MG C 601 O1A TPP C 600 1555 1555 2.09 LINK MG MG C 601 O3B TPP C 600 1555 1555 2.07 LINK MG MG D 601 OD1 ASP D 444 1555 1555 2.02 LINK MG MG D 601 OD1 ASN D 471 1555 1555 2.06 LINK MG MG D 601 O GLY D 473 1555 1555 1.98 LINK MG MG D 601 O1A TPP D 600 1555 1555 2.19 LINK MG MG D 601 O3B TPP D 600 1555 1555 2.12 LINK MG MG A 601 O HOH A 984 1555 1555 2.17 LINK MG MG B 601 O HOH B 977 1555 1555 2.09 LINK MG MG C 601 O HOH C1024 1555 1555 2.16 LINK MG MG D 601 O HOH D 957 1555 1555 2.23 SITE 1 AC1 4 ASP A 444 ASN A 471 GLY A 473 HOH A 984 SITE 1 AC2 4 ASP B 444 ASN B 471 GLY B 473 HOH B 977 SITE 1 AC3 4 ASP C 444 ASN C 471 GLY C 473 HOH C1024 SITE 1 AC4 4 ASP D 444 ASN D 471 GLY D 473 HOH D 957 SITE 1 AC5 19 THR A 390 GLY A 413 ILE A 415 ASP A 444 SITE 2 AC5 19 GLY A 445 SER A 446 ASN A 471 GLY A 473 SITE 3 AC5 19 TYR A 474 THR A 475 ILE A 476 GLU A 477 SITE 4 AC5 19 PRO B 26 GLU B 51 VAL B 76 HOH A 652 SITE 5 AC5 19 HOH A 695 HOH B 839 HOH A 984 SITE 1 AC6 18 PRO A 26 GLU A 51 THR B 390 GLY B 413 SITE 2 AC6 18 ILE B 415 GLY B 443 ASP B 444 GLY B 445 SITE 3 AC6 18 SER B 446 ASN B 471 GLY B 473 TYR B 474 SITE 4 AC6 18 THR B 475 ILE B 476 HOH B 616 HOH B 871 SITE 5 AC6 18 HOH A 861 HOH B 977 SITE 1 AC7 19 THR C 390 GLY C 413 ILE C 415 ASP C 444 SITE 2 AC7 19 GLY C 445 SER C 446 ASN C 471 GLY C 473 SITE 3 AC7 19 THR C 475 ILE C 476 PRO D 26 GLY D 27 SITE 4 AC7 19 GLU D 51 VAL D 76 HOH C 606 HOH D 636 SITE 5 AC7 19 HOH C 904 HOH D 847 HOH C1024 SITE 1 AC8 19 PRO C 26 GLU C 51 VAL C 76 THR D 390 SITE 2 AC8 19 GLY D 413 ILE D 415 GLY D 443 ASP D 444 SITE 3 AC8 19 GLY D 445 SER D 446 ASN D 471 GLY D 473 SITE 4 AC8 19 TYR D 474 THR D 475 ILE D 476 HOH D 607 SITE 5 AC8 19 HOH D 842 HOH C1004 HOH D 957 CRYST1 78.720 203.090 79.780 90.00 91.82 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012700 0.000000 0.000400 0.00000 SCALE2 0.000000 0.004920 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012540 0.00000