HEADER HYDROLASE 22-FEB-06 2G5D TITLE CRYSTAL STRUCTURE OF MLTA FROM NEISSERIA GONORRHOEAE MONOCLINIC FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: GNA33; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEISSERIA GONORRHOEAE FA 1090; SOURCE 3 ORGANISM_TAXID: 242231; SOURCE 4 STRAIN: FA1090; SOURCE 5 GENE: GNA33; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21*; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMAL-C2KV KEYWDS HYDROLASE, BETA BARREL EXPDTA X-RAY DIFFRACTION AUTHOR C.DAVIES REVDAT 5 18-OCT-17 2G5D 1 REMARK REVDAT 4 13-JUL-11 2G5D 1 VERSN REVDAT 3 24-FEB-09 2G5D 1 VERSN REVDAT 2 23-MAY-06 2G5D 1 JRNL REVDAT 1 21-MAR-06 2G5D 0 JRNL AUTH A.J.POWELL,Z.J.LIU,R.A.NICHOLAS,C.DAVIES JRNL TITL CRYSTAL STRUCTURES OF THE LYTIC TRANSGLYCOSYLASE MLTA FROM JRNL TITL 2 N.GONORRHOEAE AND E.COLI: INSIGHTS INTO INTERDOMAIN JRNL TITL 3 MOVEMENTS AND SUBSTRATE BINDING. JRNL REF J.MOL.BIOL. V. 359 122 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16618494 JRNL DOI 10.1016/J.JMB.2006.03.023 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 30253 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1528 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1932 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.2980 REMARK 3 BIN FREE R VALUE SET COUNT : 103 REMARK 3 BIN FREE R VALUE : 0.3340 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2977 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 111 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.46000 REMARK 3 B22 (A**2) : -0.22000 REMARK 3 B33 (A**2) : 1.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.78000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.195 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.178 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.153 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.382 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.903 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3059 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4144 ; 1.368 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 378 ; 6.078 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 139 ;29.058 ;22.374 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 477 ;18.447 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;21.587 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 428 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2389 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1298 ; 0.193 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1994 ; 0.305 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 143 ; 0.124 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 27 ; 0.236 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.133 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1925 ; 0.530 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3021 ; 0.849 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1286 ; 1.395 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1123 ; 2.059 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 40 A 143 REMARK 3 RESIDUE RANGE : A 343 A 441 REMARK 3 ORIGIN FOR THE GROUP (A): -3.9121 -1.6891 28.9641 REMARK 3 T TENSOR REMARK 3 T11: -0.1112 T22: -0.1618 REMARK 3 T33: -0.2024 T12: -0.0147 REMARK 3 T13: -0.0072 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 2.1583 L22: 2.9458 REMARK 3 L33: 2.6056 L12: 0.0015 REMARK 3 L13: -0.4707 L23: -0.6387 REMARK 3 S TENSOR REMARK 3 S11: 0.0160 S12: 0.0784 S13: -0.0382 REMARK 3 S21: -0.0081 S22: -0.0476 S23: -0.0159 REMARK 3 S31: 0.0344 S32: 0.2658 S33: 0.0315 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 144 A 161 REMARK 3 RESIDUE RANGE : A 245 A 337 REMARK 3 ORIGIN FOR THE GROUP (A): 25.5932 6.0638 22.5168 REMARK 3 T TENSOR REMARK 3 T11: -0.0815 T22: 0.0447 REMARK 3 T33: 0.0468 T12: -0.0595 REMARK 3 T13: 0.0089 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 4.2325 L22: 2.2550 REMARK 3 L33: 2.0402 L12: -0.9074 REMARK 3 L13: -0.0125 L23: 0.0657 REMARK 3 S TENSOR REMARK 3 S11: 0.1304 S12: -0.2404 S13: -0.0082 REMARK 3 S21: 0.1186 S22: -0.0194 S23: 0.0625 REMARK 3 S31: -0.0037 S32: -0.0588 S33: -0.1110 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 162 A 244 REMARK 3 ORIGIN FOR THE GROUP (A): 22.6014 -3.9629 2.1862 REMARK 3 T TENSOR REMARK 3 T11: 0.1558 T22: 0.4288 REMARK 3 T33: 0.1495 T12: 0.0170 REMARK 3 T13: 0.0304 T23: -0.2468 REMARK 3 L TENSOR REMARK 3 L11: 6.4868 L22: 3.3649 REMARK 3 L33: 6.7641 L12: 0.8814 REMARK 3 L13: -0.4344 L23: 1.2215 REMARK 3 S TENSOR REMARK 3 S11: 0.0895 S12: 1.5125 S13: -0.7141 REMARK 3 S21: -0.4860 S22: -0.0998 S23: -0.0853 REMARK 3 S31: 0.8246 S32: -0.4288 S33: 0.0103 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2G5D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAR-06. REMARK 100 THE DEPOSITION ID IS D_1000036708. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : R-AXIS REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30354 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 64.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.39600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: MLTA FROM N. GONORRHOEAE - ORTHORHOMBIC FORM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 29% PEG 8000, 100 MM TRIS PH 8.7, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 19.22900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 20 REMARK 465 SER A 21 REMARK 465 GLN A 22 REMARK 465 SER A 23 REMARK 465 ARG A 24 REMARK 465 SER A 25 REMARK 465 ILE A 26 REMARK 465 GLN A 27 REMARK 465 THR A 28 REMARK 465 PHE A 29 REMARK 465 PRO A 30 REMARK 465 GLN A 31 REMARK 465 PRO A 32 REMARK 465 ASP A 33 REMARK 465 THR A 34 REMARK 465 SER A 35 REMARK 465 VAL A 36 REMARK 465 ILE A 37 REMARK 465 ASN A 38 REMARK 465 GLY A 39 REMARK 465 ALA A 173 REMARK 465 GLY A 174 REMARK 465 LEU A 175 REMARK 465 ARG A 176 REMARK 465 GLY A 177 REMARK 465 GLY A 178 REMARK 465 LYS A 179 REMARK 465 ASN A 180 REMARK 465 THR A 193 REMARK 465 ILE A 194 REMARK 465 ASP A 195 REMARK 465 ASN A 196 REMARK 465 ALA A 197 REMARK 465 GLY A 198 REMARK 465 GLY A 199 REMARK 465 ALA A 338 REMARK 465 GLY A 339 REMARK 465 SER A 340 REMARK 465 GLY A 341 REMARK 465 GLY A 342 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 185 CG ARG A 185 CD 0.231 REMARK 500 ARG A 185 CD ARG A 185 NE 0.219 REMARK 500 ARG A 185 CZ ARG A 185 NH2 0.255 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 372 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 190 17.47 -143.10 REMARK 500 THR A 211 -158.83 -120.58 REMARK 500 ASP A 296 31.07 -99.82 REMARK 500 LEU A 302 23.78 -71.63 REMARK 500 GLU A 356 -3.66 77.52 REMARK 500 THR A 376 -158.16 -146.72 REMARK 500 ARG A 382 -5.26 60.92 REMARK 500 LYS A 422 84.72 -152.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 185 0.06 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 2G5D A 22 441 UNP Q9L6H1 Q9L6H1_NEIGO 22 441 SEQADV 2G5D GLY A 20 UNP Q9L6H1 CLONING ARTIFACT SEQADV 2G5D SER A 21 UNP Q9L6H1 CLONING ARTIFACT SEQADV 2G5D ILE A 109 UNP Q9L6H1 VAL 109 CONFLICT SEQADV 2G5D GLY A 342 UNP Q9L6H1 ASN 342 CONFLICT SEQADV 2G5D ASP A 343 UNP Q9L6H1 GLU 343 CONFLICT SEQRES 1 A 422 GLY SER GLN SER ARG SER ILE GLN THR PHE PRO GLN PRO SEQRES 2 A 422 ASP THR SER VAL ILE ASN GLY PRO ASP ARG PRO ALA GLY SEQRES 3 A 422 ILE PRO ASP PRO ALA GLY THR THR VAL ALA GLY GLY GLY SEQRES 4 A 422 ALA VAL TYR THR VAL VAL PRO HIS LEU SER MET PRO HIS SEQRES 5 A 422 TRP ALA ALA GLN ASP PHE ALA LYS SER LEU GLN SER PHE SEQRES 6 A 422 ARG LEU GLY CYS ALA ASN LEU LYS ASN ARG GLN GLY TRP SEQRES 7 A 422 GLN ASP VAL CYS ALA GLN ALA PHE GLN THR PRO ILE HIS SEQRES 8 A 422 SER PHE GLN ALA LYS ARG PHE PHE GLU ARG TYR PHE THR SEQRES 9 A 422 PRO TRP GLN VAL ALA GLY ASN GLY SER LEU ALA GLY THR SEQRES 10 A 422 VAL THR GLY TYR TYR GLU PRO VAL LEU LYS GLY ASP GLY SEQRES 11 A 422 ARG ARG THR GLU ARG ALA ARG PHE PRO ILE TYR GLY ILE SEQRES 12 A 422 PRO ASP ASP PHE ILE SER VAL PRO LEU PRO ALA GLY LEU SEQRES 13 A 422 ARG GLY GLY LYS ASN LEU VAL ARG ILE ARG GLN THR GLY SEQRES 14 A 422 LYS ASN SER GLY THR ILE ASP ASN ALA GLY GLY THR HIS SEQRES 15 A 422 THR ALA ASP LEU SER ARG PHE PRO ILE THR ALA ARG THR SEQRES 16 A 422 THR ALA ILE LYS GLY ARG PHE GLU GLY SER ARG PHE LEU SEQRES 17 A 422 PRO TYR HIS THR ARG ASN GLN ILE ASN GLY GLY ALA LEU SEQRES 18 A 422 ASP GLY LYS ALA PRO ILE LEU GLY TYR ALA GLU ASP PRO SEQRES 19 A 422 VAL GLU LEU PHE PHE MET HIS ILE GLN GLY SER GLY ARG SEQRES 20 A 422 LEU LYS THR PRO SER GLY LYS TYR ILE ARG ILE GLY TYR SEQRES 21 A 422 ALA ASP LYS ASN GLU HIS PRO TYR VAL SER ILE GLY ARG SEQRES 22 A 422 TYR MET ALA ASP LYS GLY TYR LEU LYS LEU GLY GLN THR SEQRES 23 A 422 SER MET GLN GLY ILE LYS ALA TYR MET ARG GLN ASN PRO SEQRES 24 A 422 GLN ARG LEU ALA GLU VAL LEU GLY GLN ASN PRO SER TYR SEQRES 25 A 422 ILE PHE PHE ARG GLU LEU ALA GLY SER GLY GLY ASP GLY SEQRES 26 A 422 PRO VAL GLY ALA LEU GLY THR PRO LEU MET GLY GLU TYR SEQRES 27 A 422 ALA GLY ALA ILE ASP ARG HIS TYR ILE THR LEU GLY ALA SEQRES 28 A 422 PRO LEU PHE VAL ALA THR ALA HIS PRO VAL THR ARG LYS SEQRES 29 A 422 ALA LEU ASN ARG LEU ILE MET ALA GLN ASP THR GLY SER SEQRES 30 A 422 ALA ILE LYS GLY ALA VAL ARG VAL ASP TYR PHE TRP GLY SEQRES 31 A 422 TYR GLY ASP GLU ALA GLY GLU LEU ALA GLY LYS GLN LYS SEQRES 32 A 422 THR THR GLY TYR VAL TRP GLN LEU LEU PRO ASN GLY MET SEQRES 33 A 422 LYS PRO GLU TYR ARG PRO FORMUL 2 HOH *111(H2 O) HELIX 1 1 PRO A 65 MET A 69 5 5 HELIX 2 2 ASP A 76 LYS A 92 1 17 HELIX 3 3 TRP A 97 GLN A 106 1 10 HELIX 4 4 HIS A 110 TYR A 121 1 12 HELIX 5 5 THR A 231 GLY A 237 1 7 HELIX 6 6 ASP A 252 GLY A 263 1 12 HELIX 7 7 SER A 289 ASP A 296 1 8 HELIX 8 8 SER A 306 ASN A 317 1 12 HELIX 9 9 ARG A 320 GLY A 326 1 7 HELIX 10 10 GLY A 411 GLN A 421 1 11 SHEET 1 A10 THR A 53 GLY A 56 0 SHEET 2 A10 ALA A 59 VAL A 63 -1 O TYR A 61 N VAL A 54 SHEET 3 A10 PHE A 122 GLY A 129 -1 O GLN A 126 N THR A 62 SHEET 4 A10 LYS A 422 PRO A 432 -1 O GLN A 429 N TRP A 125 SHEET 5 A10 PRO A 371 ALA A 377 -1 N PRO A 371 O LEU A 430 SHEET 6 A10 ALA A 384 THR A 394 -1 O ILE A 389 N LEU A 372 SHEET 7 A10 ALA A 358 ILE A 361 1 N ILE A 361 O ASP A 393 SHEET 8 A10 ARG A 403 TYR A 410 -1 O ASP A 405 N ALA A 360 SHEET 9 A10 GLY A 135 GLU A 142 1 N THR A 138 O TYR A 406 SHEET 10 A10 LYS A 422 PRO A 432 -1 O THR A 423 N VAL A 137 SHEET 1 B 6 PHE A 157 TYR A 160 0 SHEET 2 B 6 ILE A 246 ALA A 250 -1 O LEU A 247 N ILE A 159 SHEET 3 B 6 VAL A 144 ASP A 148 -1 N ASP A 148 O TYR A 249 SHEET 4 B 6 GLY A 265 LYS A 268 1 O ARG A 266 N LEU A 145 SHEET 5 B 6 TYR A 274 LYS A 282 -1 O ILE A 275 N LEU A 267 SHEET 6 B 6 ILE A 332 GLU A 336 -1 O PHE A 333 N ASP A 281 SHEET 1 C 5 ILE A 167 PRO A 170 0 SHEET 2 C 5 ALA A 216 GLU A 222 -1 O GLY A 219 N ILE A 167 SHEET 3 C 5 ARG A 225 PRO A 228 -1 O ARG A 225 N GLU A 222 SHEET 4 C 5 HIS A 201 ALA A 203 1 N THR A 202 O PHE A 226 SHEET 5 C 5 VAL A 182 ILE A 184 -1 N VAL A 182 O ALA A 203 SSBOND 1 CYS A 88 CYS A 101 1555 1555 2.08 CISPEP 1 LYS A 297 GLY A 298 0 -9.64 CRYST1 66.783 38.458 84.591 90.00 106.46 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014974 0.000000 0.004424 0.00000 SCALE2 0.000000 0.026002 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012327 0.00000