data_2G5M
#
_entry.id 2G5M
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.392
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 2G5M pdb_00002g5m 10.2210/pdb2g5m/pdb
RCSB RCSB036717 ? ?
WWPDB D_1000036717 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2007-01-09
2 'Structure model' 1 1 2008-05-01
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2022-03-09
5 'Structure model' 1 4 2024-05-29
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
6 5 'Structure model' 'Data collection'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' database_2
2 4 'Structure model' pdbx_nmr_software
3 4 'Structure model' pdbx_nmr_spectrometer
4 4 'Structure model' pdbx_struct_assembly
5 4 'Structure model' pdbx_struct_oper_list
6 4 'Structure model' struct_ref_seq_dif
7 5 'Structure model' chem_comp_atom
8 5 'Structure model' chem_comp_bond
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_database_2.pdbx_DOI'
2 4 'Structure model' '_database_2.pdbx_database_accession'
3 4 'Structure model' '_pdbx_nmr_software.name'
4 4 'Structure model' '_pdbx_nmr_spectrometer.model'
5 4 'Structure model' '_struct_ref_seq_dif.details'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 2G5M
_pdbx_database_status.recvd_initial_deposition_date 2006-02-23
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 2fn5 'neurabin pdz domain coordinates' unspecified
BMRB 6927 'spinophilin pdz domain peak lists' unspecified
BMRB 6933 'neurabin pdz domain peak lists' unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Kelker, M.S.' 1
'Peti, W.' 2
#
_citation.id primary
_citation.title 'Structural basis for spinophilin-neurabin receptor interaction.'
_citation.journal_abbrev Biochemistry
_citation.journal_volume 46
_citation.page_first 2333
_citation.page_last 2344
_citation.year 2007
_citation.journal_id_ASTM BICHAW
_citation.country US
_citation.journal_id_ISSN 0006-2960
_citation.journal_id_CSD 0033
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 17279777
_citation.pdbx_database_id_DOI 10.1021/bi602341c
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Kelker, M.S.' 1 ?
primary 'Dancheck, B.' 2 ?
primary 'Ju, T.' 3 ?
primary 'Kessler, R.P.' 4 ?
primary 'Hudak, J.' 5 ?
primary 'Nairn, A.C.' 6 ?
primary 'Peti, W.' 7 ?
#
_entity.id 1
_entity.type polymer
_entity.src_method man
_entity.pdbx_description Neurabin-2
_entity.formula_weight 12135.745
_entity.pdbx_number_of_molecules 1
_entity.pdbx_ec ?
_entity.pdbx_mutation ?
_entity.pdbx_fragment 'PDZ domain'
_entity.details ?
#
_entity_name_com.entity_id 1
_entity_name_com.name
;Neurabin-II, Neural tissue-specific F-actin binding protein II, Protein phosphatase 1 regulatory subunit 9B, Spinophilin, p130, PP1bp134
;
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code
;GHMELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVL
RNTKGRVRFMIGRERPGEQSEVAQLIQQTLEQE
;
_entity_poly.pdbx_seq_one_letter_code_can
;GHMELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVL
RNTKGRVRFMIGRERPGEQSEVAQLIQQTLEQE
;
_entity_poly.pdbx_strand_id B
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLY n
1 2 HIS n
1 3 MET n
1 4 GLU n
1 5 LEU n
1 6 PHE n
1 7 PRO n
1 8 VAL n
1 9 GLU n
1 10 LEU n
1 11 GLU n
1 12 LYS n
1 13 ASP n
1 14 SER n
1 15 GLU n
1 16 GLY n
1 17 LEU n
1 18 GLY n
1 19 ILE n
1 20 SER n
1 21 ILE n
1 22 ILE n
1 23 GLY n
1 24 MET n
1 25 GLY n
1 26 ALA n
1 27 GLY n
1 28 ALA n
1 29 ASP n
1 30 MET n
1 31 GLY n
1 32 LEU n
1 33 GLU n
1 34 LYS n
1 35 LEU n
1 36 GLY n
1 37 ILE n
1 38 PHE n
1 39 VAL n
1 40 LYS n
1 41 THR n
1 42 VAL n
1 43 THR n
1 44 GLU n
1 45 GLY n
1 46 GLY n
1 47 ALA n
1 48 ALA n
1 49 HIS n
1 50 ARG n
1 51 ASP n
1 52 GLY n
1 53 ARG n
1 54 ILE n
1 55 GLN n
1 56 VAL n
1 57 ASN n
1 58 ASP n
1 59 LEU n
1 60 LEU n
1 61 VAL n
1 62 GLU n
1 63 VAL n
1 64 ASP n
1 65 GLY n
1 66 THR n
1 67 SER n
1 68 LEU n
1 69 VAL n
1 70 GLY n
1 71 VAL n
1 72 THR n
1 73 GLN n
1 74 SER n
1 75 PHE n
1 76 ALA n
1 77 ALA n
1 78 SER n
1 79 VAL n
1 80 LEU n
1 81 ARG n
1 82 ASN n
1 83 THR n
1 84 LYS n
1 85 GLY n
1 86 ARG n
1 87 VAL n
1 88 ARG n
1 89 PHE n
1 90 MET n
1 91 ILE n
1 92 GLY n
1 93 ARG n
1 94 GLU n
1 95 ARG n
1 96 PRO n
1 97 GLY n
1 98 GLU n
1 99 GLN n
1 100 SER n
1 101 GLU n
1 102 VAL n
1 103 ALA n
1 104 GLN n
1 105 LEU n
1 106 ILE n
1 107 GLN n
1 108 GLN n
1 109 THR n
1 110 LEU n
1 111 GLU n
1 112 GLN n
1 113 GLU n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type ?
_entity_src_gen.pdbx_beg_seq_num ?
_entity_src_gen.pdbx_end_seq_num ?
_entity_src_gen.gene_src_common_name 'Norway rat'
_entity_src_gen.gene_src_genus Rattus
_entity_src_gen.pdbx_gene_src_gene Ppp1r9b
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Rattus norvegicus'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10116
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562
_entity_src_gen.host_org_genus Escherichia
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain 'BL21 (DE3) RIL codon plus'
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type plasmid
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name 'derivitive of pET28a'
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 GLY 1 1 1 GLY GLY B . n
A 1 2 HIS 2 2 2 HIS HIS B . n
A 1 3 MET 3 3 3 MET MET B . n
A 1 4 GLU 4 4 4 GLU GLU B . n
A 1 5 LEU 5 5 5 LEU LEU B . n
A 1 6 PHE 6 6 6 PHE PHE B . n
A 1 7 PRO 7 7 7 PRO PRO B . n
A 1 8 VAL 8 8 8 VAL VAL B . n
A 1 9 GLU 9 9 9 GLU GLU B . n
A 1 10 LEU 10 10 10 LEU LEU B . n
A 1 11 GLU 11 11 11 GLU GLU B . n
A 1 12 LYS 12 12 12 LYS LYS B . n
A 1 13 ASP 13 13 13 ASP ASP B . n
A 1 14 SER 14 14 14 SER SER B . n
A 1 15 GLU 15 15 15 GLU GLU B . n
A 1 16 GLY 16 16 16 GLY GLY B . n
A 1 17 LEU 17 17 17 LEU LEU B . n
A 1 18 GLY 18 18 18 GLY GLY B . n
A 1 19 ILE 19 19 19 ILE ILE B . n
A 1 20 SER 20 20 20 SER SER B . n
A 1 21 ILE 21 21 21 ILE ILE B . n
A 1 22 ILE 22 22 22 ILE ILE B . n
A 1 23 GLY 23 23 23 GLY GLY B . n
A 1 24 MET 24 24 24 MET MET B . n
A 1 25 GLY 25 25 25 GLY GLY B . n
A 1 26 ALA 26 26 26 ALA ALA B . n
A 1 27 GLY 27 27 27 GLY GLY B . n
A 1 28 ALA 28 28 28 ALA ALA B . n
A 1 29 ASP 29 29 29 ASP ASP B . n
A 1 30 MET 30 30 30 MET MET B . n
A 1 31 GLY 31 31 31 GLY GLY B . n
A 1 32 LEU 32 32 32 LEU LEU B . n
A 1 33 GLU 33 33 33 GLU GLU B . n
A 1 34 LYS 34 34 34 LYS LYS B . n
A 1 35 LEU 35 35 35 LEU LEU B . n
A 1 36 GLY 36 36 36 GLY GLY B . n
A 1 37 ILE 37 37 37 ILE ILE B . n
A 1 38 PHE 38 38 38 PHE PHE B . n
A 1 39 VAL 39 39 39 VAL VAL B . n
A 1 40 LYS 40 40 40 LYS LYS B . n
A 1 41 THR 41 41 41 THR THR B . n
A 1 42 VAL 42 42 42 VAL VAL B . n
A 1 43 THR 43 43 43 THR THR B . n
A 1 44 GLU 44 44 44 GLU GLU B . n
A 1 45 GLY 45 45 45 GLY GLY B . n
A 1 46 GLY 46 46 46 GLY GLY B . n
A 1 47 ALA 47 47 47 ALA ALA B . n
A 1 48 ALA 48 48 48 ALA ALA B . n
A 1 49 HIS 49 49 49 HIS HIS B . n
A 1 50 ARG 50 50 50 ARG ARG B . n
A 1 51 ASP 51 51 51 ASP ASP B . n
A 1 52 GLY 52 52 52 GLY GLY B . n
A 1 53 ARG 53 53 53 ARG ARG B . n
A 1 54 ILE 54 54 54 ILE ILE B . n
A 1 55 GLN 55 55 55 GLN GLN B . n
A 1 56 VAL 56 56 56 VAL VAL B . n
A 1 57 ASN 57 57 57 ASN ASN B . n
A 1 58 ASP 58 58 58 ASP ASP B . n
A 1 59 LEU 59 59 59 LEU LEU B . n
A 1 60 LEU 60 60 60 LEU LEU B . n
A 1 61 VAL 61 61 61 VAL VAL B . n
A 1 62 GLU 62 62 62 GLU GLU B . n
A 1 63 VAL 63 63 63 VAL VAL B . n
A 1 64 ASP 64 64 64 ASP ASP B . n
A 1 65 GLY 65 65 65 GLY GLY B . n
A 1 66 THR 66 66 66 THR THR B . n
A 1 67 SER 67 67 67 SER SER B . n
A 1 68 LEU 68 68 68 LEU LEU B . n
A 1 69 VAL 69 69 69 VAL VAL B . n
A 1 70 GLY 70 70 70 GLY GLY B . n
A 1 71 VAL 71 71 71 VAL VAL B . n
A 1 72 THR 72 72 72 THR THR B . n
A 1 73 GLN 73 73 73 GLN GLN B . n
A 1 74 SER 74 74 74 SER SER B . n
A 1 75 PHE 75 75 75 PHE PHE B . n
A 1 76 ALA 76 76 76 ALA ALA B . n
A 1 77 ALA 77 77 77 ALA ALA B . n
A 1 78 SER 78 78 78 SER SER B . n
A 1 79 VAL 79 79 79 VAL VAL B . n
A 1 80 LEU 80 80 80 LEU LEU B . n
A 1 81 ARG 81 81 81 ARG ARG B . n
A 1 82 ASN 82 82 82 ASN ASN B . n
A 1 83 THR 83 83 83 THR THR B . n
A 1 84 LYS 84 84 84 LYS LYS B . n
A 1 85 GLY 85 85 85 GLY GLY B . n
A 1 86 ARG 86 86 86 ARG ARG B . n
A 1 87 VAL 87 87 87 VAL VAL B . n
A 1 88 ARG 88 88 88 ARG ARG B . n
A 1 89 PHE 89 89 89 PHE PHE B . n
A 1 90 MET 90 90 90 MET MET B . n
A 1 91 ILE 91 91 91 ILE ILE B . n
A 1 92 GLY 92 92 92 GLY GLY B . n
A 1 93 ARG 93 93 93 ARG ARG B . n
A 1 94 GLU 94 94 94 GLU GLU B . n
A 1 95 ARG 95 95 95 ARG ARG B . n
A 1 96 PRO 96 96 96 PRO PRO B . n
A 1 97 GLY 97 97 97 GLY GLY B . n
A 1 98 GLU 98 98 98 GLU GLU B . n
A 1 99 GLN 99 99 99 GLN GLN B . n
A 1 100 SER 100 100 100 SER SER B . n
A 1 101 GLU 101 101 101 GLU GLU B . n
A 1 102 VAL 102 102 102 VAL VAL B . n
A 1 103 ALA 103 103 103 ALA ALA B . n
A 1 104 GLN 104 104 104 GLN GLN B . n
A 1 105 LEU 105 105 105 LEU LEU B . n
A 1 106 ILE 106 106 106 ILE ILE B . n
A 1 107 GLN 107 107 107 GLN GLN B . n
A 1 108 GLN 108 108 108 GLN GLN B . n
A 1 109 THR 109 109 109 THR THR B . n
A 1 110 LEU 110 110 110 LEU LEU B . n
A 1 111 GLU 111 111 111 GLU GLU B . n
A 1 112 GLN 112 112 112 GLN GLN B . n
A 1 113 GLU 113 113 113 GLU GLU B . n
#
_exptl.entry_id 2G5M
_exptl.method 'SOLUTION NMR'
_exptl.crystals_number ?
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews ?
_exptl_crystal.density_percent_sol ?
_exptl_crystal.description ?
#
_diffrn.id 1
_diffrn.ambient_temp ?
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type ?
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength .
_diffrn_radiation_wavelength.wt 1.0
#
_database_PDB_matrix.entry_id 2G5M
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 2G5M
_struct.title 'Spinophilin PDZ domain'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 2G5M
_struct_keywords.pdbx_keywords 'PROTEIN BINDING'
_struct_keywords.text 'Spinophilin, PDZ domain, CNS, synaptic transmission, PROTEIN BINDING'
#
_struct_asym.id A
_struct_asym.pdbx_blank_PDB_chainid_flag N
_struct_asym.pdbx_modified N
_struct_asym.entity_id 1
_struct_asym.details ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code NEB2_RAT
_struct_ref.pdbx_db_accession O35274
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code
;ELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT
KGRVRFMIGRERPGEQSEVAQLIQQTLEQE
;
_struct_ref.pdbx_align_begin 493
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 2G5M
_struct_ref_seq.pdbx_strand_id B
_struct_ref_seq.seq_align_beg 4
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 113
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession O35274
_struct_ref_seq.db_align_beg 493
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 602
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 4
_struct_ref_seq.pdbx_auth_seq_align_end 113
#
loop_
_struct_ref_seq_dif.align_id
_struct_ref_seq_dif.pdbx_pdb_id_code
_struct_ref_seq_dif.mon_id
_struct_ref_seq_dif.pdbx_pdb_strand_id
_struct_ref_seq_dif.seq_num
_struct_ref_seq_dif.pdbx_pdb_ins_code
_struct_ref_seq_dif.pdbx_seq_db_name
_struct_ref_seq_dif.pdbx_seq_db_accession_code
_struct_ref_seq_dif.db_mon_id
_struct_ref_seq_dif.pdbx_seq_db_seq_num
_struct_ref_seq_dif.details
_struct_ref_seq_dif.pdbx_auth_seq_num
_struct_ref_seq_dif.pdbx_ordinal
1 2G5M GLY B 1 ? UNP O35274 ? ? 'cloning artifact' 1 1
1 2G5M HIS B 2 ? UNP O35274 ? ? 'cloning artifact' 2 2
1 2G5M MET B 3 ? UNP O35274 ? ? 'cloning artifact' 3 3
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 1 GLY A 46 ? GLY A 52 ? GLY B 46 GLY B 52 1 ? 7
HELX_P HELX_P2 2 THR A 72 ? THR A 83 ? THR B 72 THR B 83 1 ? 12
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
A ? 4 ?
B ? 2 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
A 2 3 ? anti-parallel
A 3 4 ? anti-parallel
B 1 2 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 GLU A 4 ? GLU A 9 ? GLU B 4 GLU B 9
A 2 ARG A 88 ? ARG A 93 ? ARG B 88 ARG B 93
A 3 LEU A 60 ? VAL A 63 ? LEU B 60 VAL B 63
A 4 THR A 66 ? SER A 67 ? THR B 66 SER B 67
B 1 SER A 20 ? GLY A 25 ? SER B 20 GLY B 25
B 2 LEU A 35 ? THR A 41 ? LEU B 35 THR B 41
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 N VAL A 8 ? N VAL B 8 O PHE A 89 ? O PHE B 89
A 2 3 O MET A 90 ? O MET B 90 N GLU A 62 ? N GLU B 62
A 3 4 N VAL A 63 ? N VAL B 63 O THR A 66 ? O THR B 66
B 1 2 N MET A 24 ? N MET B 24 O GLY A 36 ? O GLY B 36
#
loop_
_pdbx_validate_close_contact.id
_pdbx_validate_close_contact.PDB_model_num
_pdbx_validate_close_contact.auth_atom_id_1
_pdbx_validate_close_contact.auth_asym_id_1
_pdbx_validate_close_contact.auth_comp_id_1
_pdbx_validate_close_contact.auth_seq_id_1
_pdbx_validate_close_contact.PDB_ins_code_1
_pdbx_validate_close_contact.label_alt_id_1
_pdbx_validate_close_contact.auth_atom_id_2
_pdbx_validate_close_contact.auth_asym_id_2
_pdbx_validate_close_contact.auth_comp_id_2
_pdbx_validate_close_contact.auth_seq_id_2
_pdbx_validate_close_contact.PDB_ins_code_2
_pdbx_validate_close_contact.label_alt_id_2
_pdbx_validate_close_contact.dist
1 2 OE1 B GLU 11 ? ? HE B ARG 86 ? ? 1.59
2 10 OD1 B ASP 58 ? ? HH21 B ARG 93 ? ? 1.60
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 MET B 30 ? ? 61.89 77.85
2 1 LEU B 32 ? ? 178.44 -64.24
3 1 GLU B 33 ? ? 45.86 86.86
4 1 ARG B 53 ? ? -103.07 -69.41
5 1 THR B 66 ? ? -160.64 115.66
6 1 VAL B 69 ? ? 70.05 -40.46
7 1 LYS B 84 ? ? -67.89 -173.76
8 1 GLU B 98 ? ? -79.29 23.27
9 1 ALA B 103 ? ? 67.50 -65.68
10 1 LEU B 105 ? ? 60.47 -172.26
11 1 GLN B 107 ? ? 55.94 94.61
12 2 ALA B 28 ? ? -68.91 79.26
13 2 LEU B 32 ? ? -121.55 -53.62
14 2 ARG B 53 ? ? -91.96 -63.46
15 2 VAL B 61 ? ? -79.20 -74.36
16 2 LYS B 84 ? ? -73.56 -162.40
17 2 ARG B 93 ? ? -69.72 94.57
18 2 ALA B 103 ? ? -118.93 -91.73
19 3 ASP B 29 ? ? -75.24 49.89
20 3 LEU B 32 ? ? -150.50 26.91
21 3 LYS B 34 ? ? -64.91 86.58
22 3 VAL B 63 ? ? -102.39 -168.45
23 3 LYS B 84 ? ? -66.56 -166.07
24 3 GLU B 98 ? ? -103.53 77.45
25 3 GLN B 99 ? ? -129.72 -66.69
26 3 GLN B 108 ? ? -84.04 34.80
27 4 ALA B 26 ? ? -163.72 -45.95
28 4 MET B 30 ? ? -91.74 45.75
29 4 GLU B 33 ? ? 49.01 22.04
30 4 ARG B 53 ? ? -109.75 -79.44
31 4 LYS B 84 ? ? -60.37 -178.70
32 4 GLN B 99 ? ? -157.16 -51.13
33 4 GLU B 101 ? ? 54.40 73.45
34 4 ALA B 103 ? ? 71.86 86.84
35 4 GLN B 104 ? ? 55.71 88.51
36 4 ILE B 106 ? ? -150.81 -57.71
37 4 LEU B 110 ? ? 68.12 -79.70
38 4 GLU B 111 ? ? 65.34 -49.34
39 5 ASP B 13 ? ? -103.17 -164.37
40 5 LEU B 32 ? ? 167.40 18.11
41 5 LEU B 35 ? ? -35.70 119.37
42 5 ARG B 53 ? ? -101.39 -60.17
43 5 VAL B 69 ? ? 73.28 -27.20
44 5 LYS B 84 ? ? -75.64 -169.18
45 5 ALA B 103 ? ? -141.92 -65.83
46 5 GLN B 108 ? ? 167.50 -23.27
47 5 LEU B 110 ? ? 73.70 33.07
48 5 GLN B 112 ? ? -176.85 -35.86
49 6 ALA B 28 ? ? -160.57 86.71
50 6 ARG B 53 ? ? -107.82 -74.77
51 6 GLN B 99 ? ? 64.97 115.17
52 6 SER B 100 ? ? -127.41 -162.85
53 6 ALA B 103 ? ? -127.62 -53.83
54 6 GLN B 107 ? ? 66.71 -28.61
55 6 GLN B 108 ? ? 73.96 75.42
56 6 GLU B 111 ? ? 52.31 73.59
57 7 MET B 30 ? ? -73.57 30.59
58 7 LEU B 32 ? ? -108.30 -67.92
59 7 LYS B 84 ? ? -70.27 -168.03
60 7 GLU B 98 ? ? 39.20 61.04
61 7 GLN B 104 ? ? 59.43 84.47
62 7 ILE B 106 ? ? -88.20 -72.81
63 7 GLN B 107 ? ? 50.17 -87.82
64 7 GLN B 108 ? ? 55.80 89.11
65 7 GLU B 111 ? ? 65.97 99.22
66 8 THR B 66 ? ? -161.31 119.43
67 8 LYS B 84 ? ? -66.74 -168.04
68 8 GLU B 94 ? ? -105.15 79.61
69 8 SER B 100 ? ? 56.49 156.97
70 8 ALA B 103 ? ? -106.52 -73.42
71 8 GLN B 108 ? ? -108.53 68.32
72 8 LEU B 110 ? ? -86.89 30.76
73 9 LEU B 68 ? ? -93.34 -77.39
74 9 VAL B 69 ? ? 70.49 -29.40
75 9 SER B 100 ? ? 58.77 -179.27
76 9 ALA B 103 ? ? -98.52 -62.16
77 9 GLN B 104 ? ? -162.74 117.77
78 9 GLN B 108 ? ? -76.83 -77.94
79 9 GLU B 111 ? ? -101.30 49.86
80 9 GLN B 112 ? ? 60.44 -102.09
81 10 ASP B 13 ? ? -111.44 -159.54
82 10 LEU B 17 ? ? 77.12 172.04
83 10 LYS B 34 ? ? -67.86 88.55
84 10 ARG B 53 ? ? -104.97 -82.77
85 10 GLN B 104 ? ? 79.49 117.34
86 10 GLU B 111 ? ? 63.10 -87.56
87 11 HIS B 2 ? ? 66.45 -163.86
88 11 ARG B 53 ? ? -99.66 -73.18
89 11 LYS B 84 ? ? -76.88 -167.49
90 11 GLU B 101 ? ? 62.54 76.07
91 11 GLN B 104 ? ? 55.85 86.03
92 11 ILE B 106 ? ? -81.02 -75.90
93 11 GLN B 107 ? ? 56.87 101.24
94 11 LEU B 110 ? ? 60.19 -94.78
95 12 HIS B 2 ? ? 76.52 156.27
96 12 LEU B 17 ? ? -164.15 108.28
97 12 LEU B 32 ? ? -146.24 -69.37
98 12 GLU B 33 ? ? 40.43 70.79
99 12 LYS B 84 ? ? -73.10 -167.58
100 12 GLN B 99 ? ? 63.44 -71.71
101 12 SER B 100 ? ? -98.32 -155.06
102 12 ALA B 103 ? ? -142.94 -77.17
103 13 ALA B 26 ? ? -165.34 98.62
104 13 MET B 30 ? ? 59.27 -6.54
105 13 LEU B 32 ? ? 77.95 -8.76
106 13 GLU B 33 ? ? -103.21 74.27
107 13 ARG B 53 ? ? -112.94 -82.84
108 13 LYS B 84 ? ? -64.60 -174.91
109 13 GLN B 99 ? ? 63.32 -95.40
110 13 ALA B 103 ? ? -152.96 -80.45
111 14 LEU B 10 ? ? -115.41 -162.59
112 14 LEU B 17 ? ? 63.66 -168.66
113 14 ALA B 26 ? ? 64.94 73.12
114 14 MET B 30 ? ? 67.56 73.78
115 14 LYS B 84 ? ? -67.80 -171.48
116 14 GLU B 98 ? ? -144.10 -28.88
117 14 ALA B 103 ? ? -102.75 -68.91
118 14 GLN B 107 ? ? 35.86 91.24
119 14 GLU B 111 ? ? -158.34 -50.77
120 15 HIS B 2 ? ? 58.50 -89.23
121 15 SER B 14 ? ? -176.55 -39.62
122 15 ILE B 19 ? ? 45.04 -177.50
123 15 ASP B 29 ? ? -143.12 30.59
124 15 LYS B 84 ? ? -65.06 -172.36
125 15 PRO B 96 ? ? -79.95 -169.37
126 15 ALA B 103 ? ? -154.63 37.79
127 15 GLN B 104 ? ? 69.36 93.74
128 15 GLN B 107 ? ? 51.87 94.66
129 16 LYS B 12 ? ? -79.28 -167.59
130 16 LEU B 17 ? ? 59.64 98.02
131 16 ALA B 26 ? ? -111.68 75.75
132 16 LYS B 84 ? ? -73.88 -167.38
133 16 PRO B 96 ? ? -82.35 -159.01
134 16 GLU B 98 ? ? 54.55 15.21
135 16 GLU B 101 ? ? -108.90 75.34
136 16 GLN B 104 ? ? 59.49 97.61
137 16 GLN B 107 ? ? 60.26 95.54
138 16 GLU B 111 ? ? 64.24 78.95
139 16 GLN B 112 ? ? 65.78 -177.31
140 17 LEU B 32 ? ? -171.01 -51.45
141 17 ARG B 53 ? ? -90.00 -81.74
142 17 GLN B 99 ? ? -92.04 -60.91
143 17 SER B 100 ? ? 53.12 -175.64
144 17 ILE B 106 ? ? -101.66 -71.67
145 18 ASP B 13 ? ? -113.27 -168.27
146 18 LEU B 32 ? ? -124.89 -69.99
147 18 VAL B 69 ? ? 175.73 -30.86
148 18 LYS B 84 ? ? -76.67 -169.00
149 18 GLN B 99 ? ? 52.32 74.56
150 18 VAL B 102 ? ? -114.68 71.01
151 18 GLN B 104 ? ? -161.48 93.64
152 18 ILE B 106 ? ? -96.94 -61.87
153 18 GLN B 107 ? ? 68.54 -33.39
154 18 GLN B 108 ? ? 64.34 78.08
155 19 LEU B 17 ? ? 71.92 172.82
156 19 ILE B 37 ? ? 64.64 98.02
157 19 ARG B 53 ? ? -118.76 -74.29
158 19 LYS B 84 ? ? -68.83 -166.78
159 19 GLU B 98 ? ? 49.33 25.15
160 19 GLU B 101 ? ? 52.94 81.78
161 19 ALA B 103 ? ? -101.21 -74.50
162 19 GLU B 111 ? ? 68.91 123.16
163 19 GLN B 112 ? ? -115.66 -76.34
164 20 ALA B 28 ? ? -99.34 54.10
165 20 LEU B 32 ? ? -140.63 -77.11
166 20 ILE B 37 ? ? 65.39 114.64
167 20 ARG B 53 ? ? -129.78 -72.78
168 20 LYS B 84 ? ? -69.11 -173.74
169 20 SER B 100 ? ? 62.79 152.66
170 20 ALA B 103 ? ? -94.02 -76.33
171 20 ILE B 106 ? ? -126.48 -60.44
172 20 GLU B 111 ? ? -102.21 66.93
#
loop_
_pdbx_validate_planes.id
_pdbx_validate_planes.PDB_model_num
_pdbx_validate_planes.auth_comp_id
_pdbx_validate_planes.auth_asym_id
_pdbx_validate_planes.auth_seq_id
_pdbx_validate_planes.PDB_ins_code
_pdbx_validate_planes.label_alt_id
_pdbx_validate_planes.rmsd
_pdbx_validate_planes.type
1 4 ARG B 50 ? ? 0.072 'SIDE CHAIN'
2 4 ARG B 86 ? ? 0.074 'SIDE CHAIN'
3 4 ARG B 93 ? ? 0.075 'SIDE CHAIN'
4 7 ARG B 86 ? ? 0.081 'SIDE CHAIN'
5 15 ARG B 86 ? ? 0.073 'SIDE CHAIN'
6 16 ARG B 95 ? ? 0.075 'SIDE CHAIN'
7 17 ARG B 93 ? ? 0.087 'SIDE CHAIN'
8 18 ARG B 95 ? ? 0.089 'SIDE CHAIN'
#
_pdbx_nmr_ensemble.entry_id 2G5M
_pdbx_nmr_ensemble.conformers_calculated_total_number 50
_pdbx_nmr_ensemble.conformers_submitted_total_number 20
_pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy'
_pdbx_nmr_ensemble.average_constraints_per_residue ?
_pdbx_nmr_ensemble.average_constraint_violations_per_residue ?
_pdbx_nmr_ensemble.maximum_distance_constraint_violation ?
_pdbx_nmr_ensemble.average_distance_constraint_violation ?
_pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ?
_pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ?
_pdbx_nmr_ensemble.distance_constraint_violation_method ?
_pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ?
_pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ?
_pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ?
#
_pdbx_nmr_representative.entry_id 2G5M
_pdbx_nmr_representative.conformer_id 1
_pdbx_nmr_representative.selection_criteria 'closest to the average'
#
loop_
_pdbx_nmr_sample_details.solution_id
_pdbx_nmr_sample_details.contents
_pdbx_nmr_sample_details.solvent_system
1 '1.8 mM PDZ domain, 15N samples; 20 mM Na phosphate buffer 50 mM NaCl, pH 6.5; 90% H2O, 10% D2O' '90% H2O/10% D2O'
2 '1.8 mM PDZ domain, 13C/15N samples; 20 mM Na phosphate buffer 50 mM NaCl, pH 6.5; 90% H2O, 10% D2O' '90% H2O/10% D2O'
3 '1.8 mM PDZ domain, 13C/15N samples; 20 mM Na phosphate buffer 50 mM NaCl, pH 6.5; 90% H2O, 10% D2O' '100% d20'
#
_pdbx_nmr_exptl_sample_conditions.conditions_id 1
_pdbx_nmr_exptl_sample_conditions.temperature 298
_pdbx_nmr_exptl_sample_conditions.pressure ambient
_pdbx_nmr_exptl_sample_conditions.pH 6.5
_pdbx_nmr_exptl_sample_conditions.ionic_strength '20 mM Na phosphate; 50 mM NaCl'
_pdbx_nmr_exptl_sample_conditions.pressure_units .
_pdbx_nmr_exptl_sample_conditions.temperature_units K
#
loop_
_pdbx_nmr_exptl.experiment_id
_pdbx_nmr_exptl.conditions_id
_pdbx_nmr_exptl.type
_pdbx_nmr_exptl.solution_id
1 1 '3D 15N resolved [1H,1H] NOESY' 1
2 1 '3D 13C resolved [1H,1H] NOESY' 2
3 1 '2D 1H-1H NOESY' 3
#
_pdbx_nmr_details.entry_id 2G5M
_pdbx_nmr_details.text
;The following spectra were used to achieve the sequence-specific backbone and side chain assignments of all aliphatic residues: 2D [1H,15N]-HSQC, 2D [1H,13C]-HSQC, 3D HNCACB, 3D CBCA(CO)NH, 3D CC(CO)NH, 3D HNCO, 3D HNCA, 3D HBHA(CO)NH, 3D 15N-resolved [1H,1H]-TOCSY, 3D HC(C)H-TOCSY6. The 2D [1H,1H]-NOESY, 2D [1H,1H]-TOCSY and 2D [1H,1H]-COSY spectra of the Spinophilin493-602 sample in D2O solution after complete H/D exchange of the labile protons were used for the assignment of the aromatic side chains. The NMR spectra were processed with Topspin1.3, and analyzed with the CARA software package.
Spectra used for the structure calculation were: 3D 15N-resolved [1H,1H]-NOESY, 3D 13C-resolved [1H,1H]-NOESY (mixing time of 85 ms) and 2D [1H,1H]-NOESY (mixing time 85 ms, D2O solution).
;
#
_pdbx_nmr_refine.entry_id 2G5M
_pdbx_nmr_refine.method 'simulated annealing torsion angle dynamics'
_pdbx_nmr_refine.details
;The amino acid sequence, the chemical shift assignment, and the NOESY spectra were input for the automated NOESY peak picking and NOE assignment method of ATNOS/CANDID/CYANA. The results of ATNOS/CANDID/CYANA were refined by manual peak adjustment and additional calculations in CYANA. The 20 conformers from the ATNOS/CANDID cycle 7 with the lowest residual CYANA target function values were energy-minimized in a water shell with the program CNS.
;
_pdbx_nmr_refine.software_ordinal 1
#
loop_
_pdbx_nmr_software.classification
_pdbx_nmr_software.name
_pdbx_nmr_software.version
_pdbx_nmr_software.authors
_pdbx_nmr_software.ordinal
processing TopSpin 1.3 Bruker 1
'structure solution' CYANA 2.0 'peter guntert' 2
refinement CNS 1.1 Brunger 3
'structure solution' atnos/candid 2.0 'Torsten Herrmann' 4
'data analysis' CARA 1.5 'Rochus Keller' 5
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
ARG N N N N 14
ARG CA C N S 15
ARG C C N N 16
ARG O O N N 17
ARG CB C N N 18
ARG CG C N N 19
ARG CD C N N 20
ARG NE N N N 21
ARG CZ C N N 22
ARG NH1 N N N 23
ARG NH2 N N N 24
ARG OXT O N N 25
ARG H H N N 26
ARG H2 H N N 27
ARG HA H N N 28
ARG HB2 H N N 29
ARG HB3 H N N 30
ARG HG2 H N N 31
ARG HG3 H N N 32
ARG HD2 H N N 33
ARG HD3 H N N 34
ARG HE H N N 35
ARG HH11 H N N 36
ARG HH12 H N N 37
ARG HH21 H N N 38
ARG HH22 H N N 39
ARG HXT H N N 40
ASN N N N N 41
ASN CA C N S 42
ASN C C N N 43
ASN O O N N 44
ASN CB C N N 45
ASN CG C N N 46
ASN OD1 O N N 47
ASN ND2 N N N 48
ASN OXT O N N 49
ASN H H N N 50
ASN H2 H N N 51
ASN HA H N N 52
ASN HB2 H N N 53
ASN HB3 H N N 54
ASN HD21 H N N 55
ASN HD22 H N N 56
ASN HXT H N N 57
ASP N N N N 58
ASP CA C N S 59
ASP C C N N 60
ASP O O N N 61
ASP CB C N N 62
ASP CG C N N 63
ASP OD1 O N N 64
ASP OD2 O N N 65
ASP OXT O N N 66
ASP H H N N 67
ASP H2 H N N 68
ASP HA H N N 69
ASP HB2 H N N 70
ASP HB3 H N N 71
ASP HD2 H N N 72
ASP HXT H N N 73
GLN N N N N 74
GLN CA C N S 75
GLN C C N N 76
GLN O O N N 77
GLN CB C N N 78
GLN CG C N N 79
GLN CD C N N 80
GLN OE1 O N N 81
GLN NE2 N N N 82
GLN OXT O N N 83
GLN H H N N 84
GLN H2 H N N 85
GLN HA H N N 86
GLN HB2 H N N 87
GLN HB3 H N N 88
GLN HG2 H N N 89
GLN HG3 H N N 90
GLN HE21 H N N 91
GLN HE22 H N N 92
GLN HXT H N N 93
GLU N N N N 94
GLU CA C N S 95
GLU C C N N 96
GLU O O N N 97
GLU CB C N N 98
GLU CG C N N 99
GLU CD C N N 100
GLU OE1 O N N 101
GLU OE2 O N N 102
GLU OXT O N N 103
GLU H H N N 104
GLU H2 H N N 105
GLU HA H N N 106
GLU HB2 H N N 107
GLU HB3 H N N 108
GLU HG2 H N N 109
GLU HG3 H N N 110
GLU HE2 H N N 111
GLU HXT H N N 112
GLY N N N N 113
GLY CA C N N 114
GLY C C N N 115
GLY O O N N 116
GLY OXT O N N 117
GLY H H N N 118
GLY H2 H N N 119
GLY HA2 H N N 120
GLY HA3 H N N 121
GLY HXT H N N 122
HIS N N N N 123
HIS CA C N S 124
HIS C C N N 125
HIS O O N N 126
HIS CB C N N 127
HIS CG C Y N 128
HIS ND1 N Y N 129
HIS CD2 C Y N 130
HIS CE1 C Y N 131
HIS NE2 N Y N 132
HIS OXT O N N 133
HIS H H N N 134
HIS H2 H N N 135
HIS HA H N N 136
HIS HB2 H N N 137
HIS HB3 H N N 138
HIS HD1 H N N 139
HIS HD2 H N N 140
HIS HE1 H N N 141
HIS HE2 H N N 142
HIS HXT H N N 143
ILE N N N N 144
ILE CA C N S 145
ILE C C N N 146
ILE O O N N 147
ILE CB C N S 148
ILE CG1 C N N 149
ILE CG2 C N N 150
ILE CD1 C N N 151
ILE OXT O N N 152
ILE H H N N 153
ILE H2 H N N 154
ILE HA H N N 155
ILE HB H N N 156
ILE HG12 H N N 157
ILE HG13 H N N 158
ILE HG21 H N N 159
ILE HG22 H N N 160
ILE HG23 H N N 161
ILE HD11 H N N 162
ILE HD12 H N N 163
ILE HD13 H N N 164
ILE HXT H N N 165
LEU N N N N 166
LEU CA C N S 167
LEU C C N N 168
LEU O O N N 169
LEU CB C N N 170
LEU CG C N N 171
LEU CD1 C N N 172
LEU CD2 C N N 173
LEU OXT O N N 174
LEU H H N N 175
LEU H2 H N N 176
LEU HA H N N 177
LEU HB2 H N N 178
LEU HB3 H N N 179
LEU HG H N N 180
LEU HD11 H N N 181
LEU HD12 H N N 182
LEU HD13 H N N 183
LEU HD21 H N N 184
LEU HD22 H N N 185
LEU HD23 H N N 186
LEU HXT H N N 187
LYS N N N N 188
LYS CA C N S 189
LYS C C N N 190
LYS O O N N 191
LYS CB C N N 192
LYS CG C N N 193
LYS CD C N N 194
LYS CE C N N 195
LYS NZ N N N 196
LYS OXT O N N 197
LYS H H N N 198
LYS H2 H N N 199
LYS HA H N N 200
LYS HB2 H N N 201
LYS HB3 H N N 202
LYS HG2 H N N 203
LYS HG3 H N N 204
LYS HD2 H N N 205
LYS HD3 H N N 206
LYS HE2 H N N 207
LYS HE3 H N N 208
LYS HZ1 H N N 209
LYS HZ2 H N N 210
LYS HZ3 H N N 211
LYS HXT H N N 212
MET N N N N 213
MET CA C N S 214
MET C C N N 215
MET O O N N 216
MET CB C N N 217
MET CG C N N 218
MET SD S N N 219
MET CE C N N 220
MET OXT O N N 221
MET H H N N 222
MET H2 H N N 223
MET HA H N N 224
MET HB2 H N N 225
MET HB3 H N N 226
MET HG2 H N N 227
MET HG3 H N N 228
MET HE1 H N N 229
MET HE2 H N N 230
MET HE3 H N N 231
MET HXT H N N 232
PHE N N N N 233
PHE CA C N S 234
PHE C C N N 235
PHE O O N N 236
PHE CB C N N 237
PHE CG C Y N 238
PHE CD1 C Y N 239
PHE CD2 C Y N 240
PHE CE1 C Y N 241
PHE CE2 C Y N 242
PHE CZ C Y N 243
PHE OXT O N N 244
PHE H H N N 245
PHE H2 H N N 246
PHE HA H N N 247
PHE HB2 H N N 248
PHE HB3 H N N 249
PHE HD1 H N N 250
PHE HD2 H N N 251
PHE HE1 H N N 252
PHE HE2 H N N 253
PHE HZ H N N 254
PHE HXT H N N 255
PRO N N N N 256
PRO CA C N S 257
PRO C C N N 258
PRO O O N N 259
PRO CB C N N 260
PRO CG C N N 261
PRO CD C N N 262
PRO OXT O N N 263
PRO H H N N 264
PRO HA H N N 265
PRO HB2 H N N 266
PRO HB3 H N N 267
PRO HG2 H N N 268
PRO HG3 H N N 269
PRO HD2 H N N 270
PRO HD3 H N N 271
PRO HXT H N N 272
SER N N N N 273
SER CA C N S 274
SER C C N N 275
SER O O N N 276
SER CB C N N 277
SER OG O N N 278
SER OXT O N N 279
SER H H N N 280
SER H2 H N N 281
SER HA H N N 282
SER HB2 H N N 283
SER HB3 H N N 284
SER HG H N N 285
SER HXT H N N 286
THR N N N N 287
THR CA C N S 288
THR C C N N 289
THR O O N N 290
THR CB C N R 291
THR OG1 O N N 292
THR CG2 C N N 293
THR OXT O N N 294
THR H H N N 295
THR H2 H N N 296
THR HA H N N 297
THR HB H N N 298
THR HG1 H N N 299
THR HG21 H N N 300
THR HG22 H N N 301
THR HG23 H N N 302
THR HXT H N N 303
VAL N N N N 304
VAL CA C N S 305
VAL C C N N 306
VAL O O N N 307
VAL CB C N N 308
VAL CG1 C N N 309
VAL CG2 C N N 310
VAL OXT O N N 311
VAL H H N N 312
VAL H2 H N N 313
VAL HA H N N 314
VAL HB H N N 315
VAL HG11 H N N 316
VAL HG12 H N N 317
VAL HG13 H N N 318
VAL HG21 H N N 319
VAL HG22 H N N 320
VAL HG23 H N N 321
VAL HXT H N N 322
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
ARG N CA sing N N 13
ARG N H sing N N 14
ARG N H2 sing N N 15
ARG CA C sing N N 16
ARG CA CB sing N N 17
ARG CA HA sing N N 18
ARG C O doub N N 19
ARG C OXT sing N N 20
ARG CB CG sing N N 21
ARG CB HB2 sing N N 22
ARG CB HB3 sing N N 23
ARG CG CD sing N N 24
ARG CG HG2 sing N N 25
ARG CG HG3 sing N N 26
ARG CD NE sing N N 27
ARG CD HD2 sing N N 28
ARG CD HD3 sing N N 29
ARG NE CZ sing N N 30
ARG NE HE sing N N 31
ARG CZ NH1 sing N N 32
ARG CZ NH2 doub N N 33
ARG NH1 HH11 sing N N 34
ARG NH1 HH12 sing N N 35
ARG NH2 HH21 sing N N 36
ARG NH2 HH22 sing N N 37
ARG OXT HXT sing N N 38
ASN N CA sing N N 39
ASN N H sing N N 40
ASN N H2 sing N N 41
ASN CA C sing N N 42
ASN CA CB sing N N 43
ASN CA HA sing N N 44
ASN C O doub N N 45
ASN C OXT sing N N 46
ASN CB CG sing N N 47
ASN CB HB2 sing N N 48
ASN CB HB3 sing N N 49
ASN CG OD1 doub N N 50
ASN CG ND2 sing N N 51
ASN ND2 HD21 sing N N 52
ASN ND2 HD22 sing N N 53
ASN OXT HXT sing N N 54
ASP N CA sing N N 55
ASP N H sing N N 56
ASP N H2 sing N N 57
ASP CA C sing N N 58
ASP CA CB sing N N 59
ASP CA HA sing N N 60
ASP C O doub N N 61
ASP C OXT sing N N 62
ASP CB CG sing N N 63
ASP CB HB2 sing N N 64
ASP CB HB3 sing N N 65
ASP CG OD1 doub N N 66
ASP CG OD2 sing N N 67
ASP OD2 HD2 sing N N 68
ASP OXT HXT sing N N 69
GLN N CA sing N N 70
GLN N H sing N N 71
GLN N H2 sing N N 72
GLN CA C sing N N 73
GLN CA CB sing N N 74
GLN CA HA sing N N 75
GLN C O doub N N 76
GLN C OXT sing N N 77
GLN CB CG sing N N 78
GLN CB HB2 sing N N 79
GLN CB HB3 sing N N 80
GLN CG CD sing N N 81
GLN CG HG2 sing N N 82
GLN CG HG3 sing N N 83
GLN CD OE1 doub N N 84
GLN CD NE2 sing N N 85
GLN NE2 HE21 sing N N 86
GLN NE2 HE22 sing N N 87
GLN OXT HXT sing N N 88
GLU N CA sing N N 89
GLU N H sing N N 90
GLU N H2 sing N N 91
GLU CA C sing N N 92
GLU CA CB sing N N 93
GLU CA HA sing N N 94
GLU C O doub N N 95
GLU C OXT sing N N 96
GLU CB CG sing N N 97
GLU CB HB2 sing N N 98
GLU CB HB3 sing N N 99
GLU CG CD sing N N 100
GLU CG HG2 sing N N 101
GLU CG HG3 sing N N 102
GLU CD OE1 doub N N 103
GLU CD OE2 sing N N 104
GLU OE2 HE2 sing N N 105
GLU OXT HXT sing N N 106
GLY N CA sing N N 107
GLY N H sing N N 108
GLY N H2 sing N N 109
GLY CA C sing N N 110
GLY CA HA2 sing N N 111
GLY CA HA3 sing N N 112
GLY C O doub N N 113
GLY C OXT sing N N 114
GLY OXT HXT sing N N 115
HIS N CA sing N N 116
HIS N H sing N N 117
HIS N H2 sing N N 118
HIS CA C sing N N 119
HIS CA CB sing N N 120
HIS CA HA sing N N 121
HIS C O doub N N 122
HIS C OXT sing N N 123
HIS CB CG sing N N 124
HIS CB HB2 sing N N 125
HIS CB HB3 sing N N 126
HIS CG ND1 sing Y N 127
HIS CG CD2 doub Y N 128
HIS ND1 CE1 doub Y N 129
HIS ND1 HD1 sing N N 130
HIS CD2 NE2 sing Y N 131
HIS CD2 HD2 sing N N 132
HIS CE1 NE2 sing Y N 133
HIS CE1 HE1 sing N N 134
HIS NE2 HE2 sing N N 135
HIS OXT HXT sing N N 136
ILE N CA sing N N 137
ILE N H sing N N 138
ILE N H2 sing N N 139
ILE CA C sing N N 140
ILE CA CB sing N N 141
ILE CA HA sing N N 142
ILE C O doub N N 143
ILE C OXT sing N N 144
ILE CB CG1 sing N N 145
ILE CB CG2 sing N N 146
ILE CB HB sing N N 147
ILE CG1 CD1 sing N N 148
ILE CG1 HG12 sing N N 149
ILE CG1 HG13 sing N N 150
ILE CG2 HG21 sing N N 151
ILE CG2 HG22 sing N N 152
ILE CG2 HG23 sing N N 153
ILE CD1 HD11 sing N N 154
ILE CD1 HD12 sing N N 155
ILE CD1 HD13 sing N N 156
ILE OXT HXT sing N N 157
LEU N CA sing N N 158
LEU N H sing N N 159
LEU N H2 sing N N 160
LEU CA C sing N N 161
LEU CA CB sing N N 162
LEU CA HA sing N N 163
LEU C O doub N N 164
LEU C OXT sing N N 165
LEU CB CG sing N N 166
LEU CB HB2 sing N N 167
LEU CB HB3 sing N N 168
LEU CG CD1 sing N N 169
LEU CG CD2 sing N N 170
LEU CG HG sing N N 171
LEU CD1 HD11 sing N N 172
LEU CD1 HD12 sing N N 173
LEU CD1 HD13 sing N N 174
LEU CD2 HD21 sing N N 175
LEU CD2 HD22 sing N N 176
LEU CD2 HD23 sing N N 177
LEU OXT HXT sing N N 178
LYS N CA sing N N 179
LYS N H sing N N 180
LYS N H2 sing N N 181
LYS CA C sing N N 182
LYS CA CB sing N N 183
LYS CA HA sing N N 184
LYS C O doub N N 185
LYS C OXT sing N N 186
LYS CB CG sing N N 187
LYS CB HB2 sing N N 188
LYS CB HB3 sing N N 189
LYS CG CD sing N N 190
LYS CG HG2 sing N N 191
LYS CG HG3 sing N N 192
LYS CD CE sing N N 193
LYS CD HD2 sing N N 194
LYS CD HD3 sing N N 195
LYS CE NZ sing N N 196
LYS CE HE2 sing N N 197
LYS CE HE3 sing N N 198
LYS NZ HZ1 sing N N 199
LYS NZ HZ2 sing N N 200
LYS NZ HZ3 sing N N 201
LYS OXT HXT sing N N 202
MET N CA sing N N 203
MET N H sing N N 204
MET N H2 sing N N 205
MET CA C sing N N 206
MET CA CB sing N N 207
MET CA HA sing N N 208
MET C O doub N N 209
MET C OXT sing N N 210
MET CB CG sing N N 211
MET CB HB2 sing N N 212
MET CB HB3 sing N N 213
MET CG SD sing N N 214
MET CG HG2 sing N N 215
MET CG HG3 sing N N 216
MET SD CE sing N N 217
MET CE HE1 sing N N 218
MET CE HE2 sing N N 219
MET CE HE3 sing N N 220
MET OXT HXT sing N N 221
PHE N CA sing N N 222
PHE N H sing N N 223
PHE N H2 sing N N 224
PHE CA C sing N N 225
PHE CA CB sing N N 226
PHE CA HA sing N N 227
PHE C O doub N N 228
PHE C OXT sing N N 229
PHE CB CG sing N N 230
PHE CB HB2 sing N N 231
PHE CB HB3 sing N N 232
PHE CG CD1 doub Y N 233
PHE CG CD2 sing Y N 234
PHE CD1 CE1 sing Y N 235
PHE CD1 HD1 sing N N 236
PHE CD2 CE2 doub Y N 237
PHE CD2 HD2 sing N N 238
PHE CE1 CZ doub Y N 239
PHE CE1 HE1 sing N N 240
PHE CE2 CZ sing Y N 241
PHE CE2 HE2 sing N N 242
PHE CZ HZ sing N N 243
PHE OXT HXT sing N N 244
PRO N CA sing N N 245
PRO N CD sing N N 246
PRO N H sing N N 247
PRO CA C sing N N 248
PRO CA CB sing N N 249
PRO CA HA sing N N 250
PRO C O doub N N 251
PRO C OXT sing N N 252
PRO CB CG sing N N 253
PRO CB HB2 sing N N 254
PRO CB HB3 sing N N 255
PRO CG CD sing N N 256
PRO CG HG2 sing N N 257
PRO CG HG3 sing N N 258
PRO CD HD2 sing N N 259
PRO CD HD3 sing N N 260
PRO OXT HXT sing N N 261
SER N CA sing N N 262
SER N H sing N N 263
SER N H2 sing N N 264
SER CA C sing N N 265
SER CA CB sing N N 266
SER CA HA sing N N 267
SER C O doub N N 268
SER C OXT sing N N 269
SER CB OG sing N N 270
SER CB HB2 sing N N 271
SER CB HB3 sing N N 272
SER OG HG sing N N 273
SER OXT HXT sing N N 274
THR N CA sing N N 275
THR N H sing N N 276
THR N H2 sing N N 277
THR CA C sing N N 278
THR CA CB sing N N 279
THR CA HA sing N N 280
THR C O doub N N 281
THR C OXT sing N N 282
THR CB OG1 sing N N 283
THR CB CG2 sing N N 284
THR CB HB sing N N 285
THR OG1 HG1 sing N N 286
THR CG2 HG21 sing N N 287
THR CG2 HG22 sing N N 288
THR CG2 HG23 sing N N 289
THR OXT HXT sing N N 290
VAL N CA sing N N 291
VAL N H sing N N 292
VAL N H2 sing N N 293
VAL CA C sing N N 294
VAL CA CB sing N N 295
VAL CA HA sing N N 296
VAL C O doub N N 297
VAL C OXT sing N N 298
VAL CB CG1 sing N N 299
VAL CB CG2 sing N N 300
VAL CB HB sing N N 301
VAL CG1 HG11 sing N N 302
VAL CG1 HG12 sing N N 303
VAL CG1 HG13 sing N N 304
VAL CG2 HG21 sing N N 305
VAL CG2 HG22 sing N N 306
VAL CG2 HG23 sing N N 307
VAL OXT HXT sing N N 308
#
_pdbx_nmr_spectrometer.spectrometer_id 1
_pdbx_nmr_spectrometer.model AVANCE
_pdbx_nmr_spectrometer.manufacturer Bruker
_pdbx_nmr_spectrometer.field_strength 500
_pdbx_nmr_spectrometer.type ?
#
_atom_sites.entry_id 2G5M
_atom_sites.fract_transf_matrix[1][1] 1.000000
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 1.000000
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 1.000000
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
H
N
O
S
#
loop_