HEADER HYDROLASE 24-FEB-06 2G6G TITLE CRYSTAL STRUCTURE OF MLTA FROM NEISSERIA GONORRHOEAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GNA33; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MLTA; COMPND 5 EC: 3.2.1.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEISSERIA GONORRHOEAE FA 1090; SOURCE 3 ORGANISM_TAXID: 242231; SOURCE 4 STRAIN: ATCC 700825 / FA 1090; SOURCE 5 GENE: GNA33; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21*; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMAL-C2KV KEYWDS HYDROLASE, BETA BARREL EXPDTA X-RAY DIFFRACTION AUTHOR A.J.POWELL,Z.J.LIU,R.A.NICHOLAS,C.DAVIES REVDAT 5 18-OCT-17 2G6G 1 REMARK REVDAT 4 13-JUL-11 2G6G 1 VERSN REVDAT 3 24-FEB-09 2G6G 1 VERSN REVDAT 2 23-MAY-06 2G6G 1 JRNL REVDAT 1 02-MAY-06 2G6G 0 JRNL AUTH A.J.POWELL,Z.J.LIU,R.A.NICHOLAS,C.DAVIES JRNL TITL CRYSTAL STRUCTURES OF THE LYTIC TRANSGLYCOSYLASE MLTA FROM JRNL TITL 2 N.GONORRHOEAE AND E.COLI: INSIGHTS INTO INTERDOMAIN JRNL TITL 3 MOVEMENTS AND SUBSTRATE BINDING. JRNL REF J.MOL.BIOL. V. 359 122 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16618494 JRNL DOI 10.1016/J.JMB.2006.03.023 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 24548 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1253 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1668 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.2820 REMARK 3 BIN FREE R VALUE SET COUNT : 85 REMARK 3 BIN FREE R VALUE : 0.3120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3128 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 94 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.11000 REMARK 3 B22 (A**2) : -1.27000 REMARK 3 B33 (A**2) : 0.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.269 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.218 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.160 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.538 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3251 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4406 ; 1.428 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 403 ; 6.301 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 146 ;29.342 ;22.603 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 501 ;18.996 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;18.411 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 451 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2518 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1309 ; 0.201 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2131 ; 0.312 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 166 ; 0.149 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 43 ; 0.157 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.173 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2043 ; 0.715 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3198 ; 1.158 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1370 ; 1.804 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1208 ; 2.721 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 21 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 33 A 51 REMARK 3 RESIDUE RANGE : A 52 A 64 REMARK 3 RESIDUE RANGE : A 65 A 76 REMARK 3 RESIDUE RANGE : A 77 A 92 REMARK 3 RESIDUE RANGE : A 93 A 97 REMARK 3 RESIDUE RANGE : A 98 A 107 REMARK 3 RESIDUE RANGE : A 108 A 112 REMARK 3 RESIDUE RANGE : A 113 A 121 REMARK 3 RESIDUE RANGE : A 122 A 130 REMARK 3 RESIDUE RANGE : A 131 A 142 REMARK 3 RESIDUE RANGE : A 343 A 349 REMARK 3 RESIDUE RANGE : A 350 A 355 REMARK 3 RESIDUE RANGE : A 356 A 362 REMARK 3 RESIDUE RANGE : A 363 A 369 REMARK 3 RESIDUE RANGE : A 370 A 380 REMARK 3 RESIDUE RANGE : A 381 A 392 REMARK 3 RESIDUE RANGE : A 393 A 402 REMARK 3 RESIDUE RANGE : A 403 A 411 REMARK 3 RESIDUE RANGE : A 412 A 421 REMARK 3 RESIDUE RANGE : A 422 A 433 REMARK 3 RESIDUE RANGE : A 434 A 441 REMARK 3 ORIGIN FOR THE GROUP (A): 5.4150 48.2220 53.6150 REMARK 3 T TENSOR REMARK 3 T11: -0.3528 T22: -0.0517 REMARK 3 T33: -0.2037 T12: 0.0130 REMARK 3 T13: -0.0611 T23: -0.0422 REMARK 3 L TENSOR REMARK 3 L11: 1.9644 L22: 2.7484 REMARK 3 L33: 1.7865 L12: 0.4553 REMARK 3 L13: -0.7644 L23: 0.8479 REMARK 3 S TENSOR REMARK 3 S11: 0.0845 S12: 0.0773 S13: 0.1256 REMARK 3 S21: 0.1305 S22: 0.1625 S23: -0.2219 REMARK 3 S31: 0.1933 S32: 0.0886 S33: -0.2470 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 15 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 143 A 149 REMARK 3 RESIDUE RANGE : A 150 A 162 REMARK 3 RESIDUE RANGE : A 163 A 166 REMARK 3 RESIDUE RANGE : A 230 A 239 REMARK 3 RESIDUE RANGE : A 240 A 243 REMARK 3 RESIDUE RANGE : A 244 A 253 REMARK 3 RESIDUE RANGE : A 254 A 263 REMARK 3 RESIDUE RANGE : A 264 A 271 REMARK 3 RESIDUE RANGE : A 272 A 283 REMARK 3 RESIDUE RANGE : A 284 A 289 REMARK 3 RESIDUE RANGE : A 290 A 297 REMARK 3 RESIDUE RANGE : A 306 A 313 REMARK 3 RESIDUE RANGE : A 314 A 320 REMARK 3 RESIDUE RANGE : A 321 A 328 REMARK 3 RESIDUE RANGE : A 329 A 337 REMARK 3 ORIGIN FOR THE GROUP (A): -4.2660 23.6050 34.6790 REMARK 3 T TENSOR REMARK 3 T11: -0.0538 T22: -0.1079 REMARK 3 T33: -0.3073 T12: -0.1583 REMARK 3 T13: -0.0504 T23: 0.0245 REMARK 3 L TENSOR REMARK 3 L11: 2.2715 L22: 3.2760 REMARK 3 L33: 9.1789 L12: -1.2206 REMARK 3 L13: 0.6861 L23: -2.0169 REMARK 3 S TENSOR REMARK 3 S11: 0.1442 S12: -0.1907 S13: 0.0210 REMARK 3 S21: 0.0853 S22: 0.2815 S23: 0.0351 REMARK 3 S31: 1.4311 S32: -0.7114 S33: -0.4257 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 9 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 167 A 173 REMARK 3 RESIDUE RANGE : A 174 A 176 REMARK 3 RESIDUE RANGE : A 177 A 189 REMARK 3 RESIDUE RANGE : A 190 A 194 REMARK 3 RESIDUE RANGE : A 195 A 200 REMARK 3 RESIDUE RANGE : A 201 A 206 REMARK 3 RESIDUE RANGE : A 207 A 213 REMARK 3 RESIDUE RANGE : A 214 A 223 REMARK 3 RESIDUE RANGE : A 224 A 229 REMARK 3 ORIGIN FOR THE GROUP (A): -8.7400 40.9770 17.4580 REMARK 3 T TENSOR REMARK 3 T11: -0.3151 T22: -0.0328 REMARK 3 T33: -0.2072 T12: 0.0193 REMARK 3 T13: 0.0705 T23: 0.0618 REMARK 3 L TENSOR REMARK 3 L11: 5.2003 L22: 4.1911 REMARK 3 L33: 7.4606 L12: -0.4707 REMARK 3 L13: 3.1508 L23: -2.0886 REMARK 3 S TENSOR REMARK 3 S11: 0.0159 S12: -0.1783 S13: 0.2076 REMARK 3 S21: 0.2939 S22: 0.2164 S23: 0.2360 REMARK 3 S31: -0.3480 S32: -0.6131 S33: -0.2323 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2G6G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAR-06. REMARK 100 THE DEPOSITION ID IS D_1000036747. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934, 0.97967, 0.97492 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24576 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 44.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.30 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 38.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.70 REMARK 200 R MERGE FOR SHELL (I) : 0.57800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 8000, 0.2 M AMMONIUM SULPHATE, REMARK 280 100 MM SODIUM CACODYLATE PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.03000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.97500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.63000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.97500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.03000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.63000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 20 REMARK 465 SER A 21 REMARK 465 GLN A 22 REMARK 465 SER A 23 REMARK 465 ARG A 24 REMARK 465 SER A 25 REMARK 465 ILE A 26 REMARK 465 GLN A 27 REMARK 465 THR A 28 REMARK 465 PHE A 29 REMARK 465 PRO A 30 REMARK 465 GLN A 31 REMARK 465 ALA A 338 REMARK 465 GLY A 339 REMARK 465 SER A 340 REMARK 465 GLY A 341 REMARK 465 GLY A 342 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 41 130.74 -38.23 REMARK 500 GLU A 284 -0.20 74.52 REMARK 500 GLU A 356 -0.82 72.85 REMARK 500 ARG A 403 116.25 -169.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 508 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2G5D RELATED DB: PDB REMARK 900 MONOCLINIC FORM OF MLTA FROM NEISSERIA GONORRHOEAE DBREF 2G6G A 22 441 UNP Q5F581 Q5F581_NEIG1 22 441 SEQADV 2G6G GLY A 20 UNP Q5F581 CLONING ARTIFACT SEQADV 2G6G SER A 21 UNP Q5F581 CLONING ARTIFACT SEQADV 2G6G MSE A 69 UNP Q5F581 MET 69 MODIFIED RESIDUE SEQADV 2G6G ILE A 109 UNP Q5F581 VAL 109 CONFLICT SEQADV 2G6G MSE A 259 UNP Q5F581 MET 259 MODIFIED RESIDUE SEQADV 2G6G MSE A 294 UNP Q5F581 MET 294 MODIFIED RESIDUE SEQADV 2G6G MSE A 307 UNP Q5F581 MET 307 MODIFIED RESIDUE SEQADV 2G6G MSE A 314 UNP Q5F581 MET 314 MODIFIED RESIDUE SEQADV 2G6G GLY A 342 UNP Q5F581 ASN 342 CONFLICT SEQADV 2G6G ASP A 343 UNP Q5F581 GLU 343 CONFLICT SEQADV 2G6G MSE A 354 UNP Q5F581 MET 354 MODIFIED RESIDUE SEQADV 2G6G MSE A 390 UNP Q5F581 MET 390 MODIFIED RESIDUE SEQADV 2G6G MSE A 435 UNP Q5F581 MET 435 MODIFIED RESIDUE SEQRES 1 A 422 GLY SER GLN SER ARG SER ILE GLN THR PHE PRO GLN PRO SEQRES 2 A 422 ASP THR SER VAL ILE ASN GLY PRO ASP ARG PRO ALA GLY SEQRES 3 A 422 ILE PRO ASP PRO ALA GLY THR THR VAL ALA GLY GLY GLY SEQRES 4 A 422 ALA VAL TYR THR VAL VAL PRO HIS LEU SER MSE PRO HIS SEQRES 5 A 422 TRP ALA ALA GLN ASP PHE ALA LYS SER LEU GLN SER PHE SEQRES 6 A 422 ARG LEU GLY CYS ALA ASN LEU LYS ASN ARG GLN GLY TRP SEQRES 7 A 422 GLN ASP VAL CYS ALA GLN ALA PHE GLN THR PRO ILE HIS SEQRES 8 A 422 SER PHE GLN ALA LYS ARG PHE PHE GLU ARG TYR PHE THR SEQRES 9 A 422 PRO TRP GLN VAL ALA GLY ASN GLY SER LEU ALA GLY THR SEQRES 10 A 422 VAL THR GLY TYR TYR GLU PRO VAL LEU LYS GLY ASP GLY SEQRES 11 A 422 ARG ARG THR GLU ARG ALA ARG PHE PRO ILE TYR GLY ILE SEQRES 12 A 422 PRO ASP ASP PHE ILE SER VAL PRO LEU PRO ALA GLY LEU SEQRES 13 A 422 ARG GLY GLY LYS ASN LEU VAL ARG ILE ARG GLN THR GLY SEQRES 14 A 422 LYS ASN SER GLY THR ILE ASP ASN ALA GLY GLY THR HIS SEQRES 15 A 422 THR ALA ASP LEU SER ARG PHE PRO ILE THR ALA ARG THR SEQRES 16 A 422 THR ALA ILE LYS GLY ARG PHE GLU GLY SER ARG PHE LEU SEQRES 17 A 422 PRO TYR HIS THR ARG ASN GLN ILE ASN GLY GLY ALA LEU SEQRES 18 A 422 ASP GLY LYS ALA PRO ILE LEU GLY TYR ALA GLU ASP PRO SEQRES 19 A 422 VAL GLU LEU PHE PHE MSE HIS ILE GLN GLY SER GLY ARG SEQRES 20 A 422 LEU LYS THR PRO SER GLY LYS TYR ILE ARG ILE GLY TYR SEQRES 21 A 422 ALA ASP LYS ASN GLU HIS PRO TYR VAL SER ILE GLY ARG SEQRES 22 A 422 TYR MSE ALA ASP LYS GLY TYR LEU LYS LEU GLY GLN THR SEQRES 23 A 422 SER MSE GLN GLY ILE LYS ALA TYR MSE ARG GLN ASN PRO SEQRES 24 A 422 GLN ARG LEU ALA GLU VAL LEU GLY GLN ASN PRO SER TYR SEQRES 25 A 422 ILE PHE PHE ARG GLU LEU ALA GLY SER GLY GLY ASP GLY SEQRES 26 A 422 PRO VAL GLY ALA LEU GLY THR PRO LEU MSE GLY GLU TYR SEQRES 27 A 422 ALA GLY ALA ILE ASP ARG HIS TYR ILE THR LEU GLY ALA SEQRES 28 A 422 PRO LEU PHE VAL ALA THR ALA HIS PRO VAL THR ARG LYS SEQRES 29 A 422 ALA LEU ASN ARG LEU ILE MSE ALA GLN ASP THR GLY SER SEQRES 30 A 422 ALA ILE LYS GLY ALA VAL ARG VAL ASP TYR PHE TRP GLY SEQRES 31 A 422 TYR GLY ASP GLU ALA GLY GLU LEU ALA GLY LYS GLN LYS SEQRES 32 A 422 THR THR GLY TYR VAL TRP GLN LEU LEU PRO ASN GLY MSE SEQRES 33 A 422 LYS PRO GLU TYR ARG PRO MODRES 2G6G MSE A 69 MET SELENOMETHIONINE MODRES 2G6G MSE A 259 MET SELENOMETHIONINE MODRES 2G6G MSE A 294 MET SELENOMETHIONINE MODRES 2G6G MSE A 307 MET SELENOMETHIONINE MODRES 2G6G MSE A 314 MET SELENOMETHIONINE MODRES 2G6G MSE A 354 MET SELENOMETHIONINE MODRES 2G6G MSE A 390 MET SELENOMETHIONINE MODRES 2G6G MSE A 435 MET SELENOMETHIONINE HET MSE A 69 8 HET MSE A 259 8 HET MSE A 294 8 HET MSE A 307 8 HET MSE A 314 8 HET MSE A 354 8 HET MSE A 390 8 HET MSE A 435 8 HET SO4 A 501 5 HET SO4 A 502 5 HET SO4 A 503 5 HET SO4 A 504 5 HET SO4 A 505 5 HET SO4 A 506 5 HET GOL A 507 6 HET GOL A 508 6 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 2 SO4 6(O4 S 2-) FORMUL 8 GOL 2(C3 H8 O3) FORMUL 10 HOH *94(H2 O) HELIX 1 1 PRO A 65 MSE A 69 5 5 HELIX 2 2 HIS A 71 GLN A 75 5 5 HELIX 3 3 ASP A 76 LYS A 92 1 17 HELIX 4 4 TRP A 97 PHE A 105 1 9 HELIX 5 5 HIS A 110 TYR A 121 1 12 HELIX 6 6 PRO A 172 ARG A 176 5 5 HELIX 7 7 SER A 206 PHE A 208 5 3 HELIX 8 8 THR A 231 GLY A 237 1 7 HELIX 9 9 ASP A 252 GLY A 263 1 12 HELIX 10 10 SER A 289 LYS A 297 1 9 HELIX 11 11 SER A 306 ASN A 317 1 12 HELIX 12 12 ARG A 320 GLY A 326 1 7 HELIX 13 13 GLY A 411 GLN A 421 1 11 SHEET 1 A10 THR A 53 GLY A 56 0 SHEET 2 A10 ALA A 59 VAL A 63 -1 O TYR A 61 N VAL A 54 SHEET 3 A10 PHE A 122 GLY A 129 -1 O GLN A 126 N THR A 62 SHEET 4 A10 LYS A 422 PRO A 432 -1 O GLN A 429 N TRP A 125 SHEET 5 A10 PRO A 371 ALA A 377 -1 N PRO A 371 O LEU A 430 SHEET 6 A10 ALA A 384 ASP A 393 -1 O LEU A 385 N THR A 376 SHEET 7 A10 ALA A 358 ALA A 360 1 N GLY A 359 O MSE A 390 SHEET 8 A10 ARG A 403 TYR A 410 -1 O ASP A 405 N ALA A 360 SHEET 9 A10 ALA A 134 GLU A 142 1 N THR A 138 O TYR A 406 SHEET 10 A10 LYS A 422 PRO A 432 -1 O THR A 423 N VAL A 137 SHEET 1 B 6 PHE A 157 TYR A 160 0 SHEET 2 B 6 ILE A 246 ALA A 250 -1 O LEU A 247 N ILE A 159 SHEET 3 B 6 VAL A 144 ASP A 148 -1 N ASP A 148 O TYR A 249 SHEET 4 B 6 SER A 264 LYS A 268 1 O LYS A 268 N LEU A 145 SHEET 5 B 6 TYR A 274 LYS A 282 -1 O ILE A 277 N GLY A 265 SHEET 6 B 6 ILE A 332 GLU A 336 -1 O PHE A 333 N ASP A 281 SHEET 1 C 3 ILE A 167 PRO A 170 0 SHEET 2 C 3 ALA A 216 GLU A 222 -1 O GLY A 219 N ILE A 167 SHEET 3 C 3 ARG A 225 PRO A 228 -1 O LEU A 227 N ARG A 220 SHEET 1 D 3 SER A 191 ILE A 194 0 SHEET 2 D 3 LEU A 181 GLY A 188 -1 N ARG A 185 O THR A 193 SHEET 3 D 3 HIS A 201 ASP A 204 -1 O ALA A 203 N VAL A 182 SSBOND 1 CYS A 88 CYS A 101 1555 1555 2.11 LINK C SER A 68 N MSE A 69 1555 1555 1.33 LINK C MSE A 69 N PRO A 70 1555 1555 1.35 LINK C PHE A 258 N MSE A 259 1555 1555 1.34 LINK C MSE A 259 N HIS A 260 1555 1555 1.34 LINK C TYR A 293 N MSE A 294 1555 1555 1.34 LINK C MSE A 294 N ALA A 295 1555 1555 1.33 LINK C SER A 306 N MSE A 307 1555 1555 1.33 LINK C MSE A 307 N GLN A 308 1555 1555 1.33 LINK C TYR A 313 N MSE A 314 1555 1555 1.33 LINK C MSE A 314 N ARG A 315 1555 1555 1.34 LINK C LEU A 353 N MSE A 354 1555 1555 1.33 LINK C MSE A 354 N GLY A 355 1555 1555 1.33 LINK C ILE A 389 N MSE A 390 1555 1555 1.32 LINK C MSE A 390 N ALA A 391 1555 1555 1.33 LINK C GLY A 434 N MSE A 435 1555 1555 1.33 LINK C MSE A 435 N LYS A 436 1555 1555 1.32 CISPEP 1 PRO A 32 ASP A 33 0 0.59 SITE 1 AC1 9 SER A 132 LEU A 133 ALA A 134 GLY A 223 SITE 2 AC1 9 SER A 224 ARG A 225 TYR A 426 HOH A 548 SITE 3 AC1 9 HOH A 575 SITE 1 AC2 6 ARG A 183 THR A 202 THR A 376 ARG A 382 SITE 2 AC2 6 THR A 423 THR A 424 SITE 1 AC3 3 PRO A 70 HIS A 71 ARG A 207 SITE 1 AC4 3 HIS A 110 SER A 111 HOH A 552 SITE 1 AC5 5 GLY A 411 ASP A 412 GLU A 413 HOH A 561 SITE 2 AC5 5 HOH A 602 SITE 1 AC6 1 ARG A 363 SITE 1 AC7 3 THR A 231 ASN A 233 GLN A 234 SITE 1 AC8 4 ASP A 393 THR A 394 ILE A 398 ASP A 405 CRYST1 48.060 87.260 111.950 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020809 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011461 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008932 0.00000