HEADER TRANSFERASE 26-FEB-06 2G6W
TITLE SUICIDE INHIBITION OF A-OXAMINE SYNTHASE: STRUCTURES OF THE COVALENT
TITLE 2 ADDUCTS OF 8-AMINO-7-OXONANOATE SYNTHASE WITH TRIFLUOROALANINE
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: 8-AMINO-7-OXONONANOATE SYNTHASE;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: AONS, 8-AMINO-7-KETOPELARGONATE SYNTHASE, 7-KETO-8-AMINO-
COMPND 5 PELARGONIC ACID SYNTHETASE, 7-KAP SYNTHETASE, L-ALANINE-PIMELYL COA
COMPND 6 LIGASE;
COMPND 7 EC: 2.3.1.47;
COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;
SOURCE 3 ORGANISM_TAXID: 562;
SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS BIOTIN, 8-AMINO-7-OXONANOATE, SYNTHASE, PLP, FLUOROALANINE,
KEYWDS 2 TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR D.ALEXEEV
REVDAT 5 20-NOV-24 2G6W 1 REMARK LINK
REVDAT 4 18-OCT-17 2G6W 1 REMARK
REVDAT 3 13-JUL-11 2G6W 1 VERSN
REVDAT 2 24-FEB-09 2G6W 1 VERSN
REVDAT 1 25-APR-06 2G6W 0
JRNL AUTH D.ALEXEEV,R.L.BAXTER,D.J.CAMPOPIANO,O.KERBARH,L.SAWYER,
JRNL AUTH 2 N.TOMCZYK,R.WATT,S.P.WEBSTER
JRNL TITL SUICIDE INHIBITION OF ALPHA-OXAMINE SYNTHASES: STRUCTURES OF
JRNL TITL 2 THE COVALENT ADDUCTS OF 8-AMINO-7-OXONONANOATE SYNTHASE WITH
JRNL TITL 3 TRIFLUOROALANINE.
JRNL REF ORG.BIOMOL.CHEM. V. 4 1209 2006
JRNL REFN ISSN 1477-0520
JRNL PMID 16557306
JRNL DOI 10.1039/B517922J
REMARK 2
REMARK 2 RESOLUTION. 2.14 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.0
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.14
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.41
REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2
REMARK 3 NUMBER OF REFLECTIONS : 20556
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.179
REMARK 3 R VALUE (WORKING SET) : 0.176
REMARK 3 FREE R VALUE : 0.246
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200
REMARK 3 FREE R VALUE TEST SET COUNT : 689
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.14
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.20
REMARK 3 REFLECTION IN BIN (WORKING SET) : 1450
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.61
REMARK 3 BIN R VALUE (WORKING SET) : 0.1980
REMARK 3 BIN FREE R VALUE SET COUNT : 53
REMARK 3 BIN FREE R VALUE : 0.3900
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2919
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 20
REMARK 3 SOLVENT ATOMS : 203
REMARK 3
REMARK 3 B VALUES.
REMARK 3 B VALUE TYPE : LIKELY RESIDUAL
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.67
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -0.31000
REMARK 3 B22 (A**2) : -0.31000
REMARK 3 B33 (A**2) : 0.47000
REMARK 3 B12 (A**2) : -0.16000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.243
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.212
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.163
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.274
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2997 ; 0.022 ; 0.021
REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4070 ; 2.011 ; 1.958
REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 382 ; 6.338 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 137 ;34.520 ;23.212
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 479 ;19.364 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;21.475 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 450 ; 0.155 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2301 ; 0.008 ; 0.020
REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1422 ; 0.260 ; 0.300
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2029 ; 0.322 ; 0.500
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 330 ; 0.213 ; 0.500
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 91 ; 0.216 ; 0.300
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 28 ; 0.178 ; 0.500
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1952 ; 1.943 ; 2.000
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3011 ; 2.877 ; 3.000
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1194 ; 2.131 ; 2.000
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1059 ; 3.039 ; 3.000
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 1
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 2 A 384
REMARK 3 ORIGIN FOR THE GROUP (A): 5.6819 -1.9936 46.4329
REMARK 3 T TENSOR
REMARK 3 T11: 0.1183 T22: 0.0012
REMARK 3 T33: 0.0750 T12: -0.0035
REMARK 3 T13: -0.0705 T23: -0.0040
REMARK 3 L TENSOR
REMARK 3 L11: 0.3647 L22: 0.6415
REMARK 3 L33: 0.9263 L12: -0.4844
REMARK 3 L13: 0.2968 L23: 0.0664
REMARK 3 S TENSOR
REMARK 3 S11: -0.0940 S12: -0.0106 S13: 0.1787
REMARK 3 S21: -0.0008 S22: 0.0324 S23: -0.1153
REMARK 3 S31: -0.1820 S32: 0.0799 S33: 0.0617
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.40
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS
REMARK 4
REMARK 4 2G6W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-APR-06.
REMARK 100 THE DEPOSITION ID IS D_1000036763.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : NULL
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG
REMARK 200 BEAMLINE : X11
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.9076
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : IMAGE PLATE
REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO
REMARK 200 DATA SCALING SOFTWARE : SCALEPACK
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22100
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900
REMARK 200 RESOLUTION RANGE LOW (A) : 45.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : 0.10600
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.4000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93
REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: AMORE
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 48.28
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULPHATE, 200MM BIS
REMARK 280 -TRIS, PH 7.0, EVAPORATION, TEMPERATURE 298K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 1 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+1/3
REMARK 290 3555 -X+Y,-X,Z+2/3
REMARK 290 4555 -Y,-X,-Z+2/3
REMARK 290 5555 -X+Y,Y,-Z+1/3
REMARK 290 6555 X,X-Y,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.32333
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 132.64667
REMARK 290 SMTRY1 4 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 4 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 132.64667
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 66.32333
REMARK 290 SMTRY1 6 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 300 REMARK: THE SECOND PART OF THE BIOLOGICAL ASSEMBLY IS GENERATED
REMARK 300 BY THE CRYSTALLOGRAPHIC TWO FOLD AXIS
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA,PQS
REMARK 350 TOTAL BURIED SURFACE AREA: 9630 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 26680 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 66.32333
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 1
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O LYS A 122 O HOH A 622 2.15
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION
REMARK 500 ARG A 149 CG ARG A 149 CD 0.180
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 LEU A 11 -74.83 -83.30
REMARK 500 ALA A 16 -88.50 -65.70
REMARK 500 ALA A 17 19.96 -58.21
REMARK 500 ASP A 18 -112.24 -89.49
REMARK 500 ASP A 37 48.58 36.71
REMARK 500 ILE A 71 -85.15 -105.68
REMARK 500 VAL A 79 -116.67 -127.00
REMARK 500 ASN A 153 19.21 57.95
REMARK 500 ASP A 205 40.60 -105.45
REMARK 500 GLN A 215 21.26 48.73
REMARK 500 LYS A 236 -104.75 -111.22
REMARK 500 VAL A 240 -109.08 -132.66
REMARK 500 SER A 241 160.33 178.24
REMARK 500 ALA A 358 120.21 -36.35
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LLF A 436
DBREF 2G6W A 1 384 UNP P12998 BIOF_ECOLI 1 384
SEQRES 1 A 384 MET SER TRP GLN GLU LYS ILE ASN ALA ALA LEU ASP ALA
SEQRES 2 A 384 ARG ARG ALA ALA ASP ALA LEU ARG ARG ARG TYR PRO VAL
SEQRES 3 A 384 ALA GLN GLY ALA GLY ARG TRP LEU VAL ALA ASP ASP ARG
SEQRES 4 A 384 GLN TYR LEU ASN PHE SER SER ASN ASP TYR LEU GLY LEU
SEQRES 5 A 384 SER HIS HIS PRO GLN ILE ILE ARG ALA TRP GLN GLN GLY
SEQRES 6 A 384 ALA GLU GLN PHE GLY ILE GLY SER GLY GLY SER GLY HIS
SEQRES 7 A 384 VAL SER GLY TYR SER VAL VAL HIS GLN ALA LEU GLU GLU
SEQRES 8 A 384 GLU LEU ALA GLU TRP LEU GLY TYR SER ARG ALA LEU LEU
SEQRES 9 A 384 PHE ILE SER GLY PHE ALA ALA ASN GLN ALA VAL ILE ALA
SEQRES 10 A 384 ALA MET MET ALA LYS GLU ASP ARG ILE ALA ALA ASP ARG
SEQRES 11 A 384 LEU SER HIS ALA SER LEU LEU GLU ALA ALA SER LEU SER
SEQRES 12 A 384 PRO SER GLN LEU ARG ARG PHE ALA HIS ASN ASP VAL THR
SEQRES 13 A 384 HIS LEU ALA ARG LEU LEU ALA SER PRO CYS PRO GLY GLN
SEQRES 14 A 384 GLN MET VAL VAL THR GLU GLY VAL PHE SER MET ASP GLY
SEQRES 15 A 384 ASP SER ALA PRO LEU ALA GLU ILE GLN GLN VAL THR GLN
SEQRES 16 A 384 GLN HIS ASN GLY TRP LEU MET VAL ASP ASP ALA HIS GLY
SEQRES 17 A 384 THR GLY VAL ILE GLY GLU GLN GLY ARG GLY SER CYS TRP
SEQRES 18 A 384 LEU GLN LYS VAL LYS PRO GLU LEU LEU VAL VAL THR PHE
SEQRES 19 A 384 GLY LYS GLY PHE GLY VAL SER GLY ALA ALA VAL LEU CYS
SEQRES 20 A 384 SER SER THR VAL ALA ASP TYR LEU LEU GLN PHE ALA ARG
SEQRES 21 A 384 HIS LEU ILE TYR SER THR SER MET PRO PRO ALA GLN ALA
SEQRES 22 A 384 GLN ALA LEU ARG ALA SER LEU ALA VAL ILE ARG SER ASP
SEQRES 23 A 384 GLU GLY ASP ALA ARG ARG GLU LYS LEU ALA ALA LEU ILE
SEQRES 24 A 384 THR ARG PHE ARG ALA GLY VAL GLN ASP LEU PRO PHE THR
SEQRES 25 A 384 LEU ALA ASP SER CYS SER ALA ILE GLN PRO LEU ILE VAL
SEQRES 26 A 384 GLY ASP ASN SER ARG ALA LEU GLN LEU ALA GLU LYS LEU
SEQRES 27 A 384 ARG GLN GLN GLY CYS TRP VAL THR ALA ILE ARG PRO PRO
SEQRES 28 A 384 THR VAL PRO ALA GLY THR ALA ARG LEU ARG LEU THR LEU
SEQRES 29 A 384 THR ALA ALA HIS GLU MET GLN ASP ILE ASP ARG LEU LEU
SEQRES 30 A 384 GLU VAL LEU HIS GLY ASN GLY
HET LLF A 436 20
HETNAM LLF (4-{(E)-[(2,2-DIFLUOROETHYL)IMINO]METHYL}-5-HYDROXY-6-
HETNAM 2 LLF METHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
HETSYN LLF (E)-N-(2,2-DIFLUOROETHYL)PYRIDOXIMINE-5'-PHOSPHATE
FORMUL 2 LLF C10 H13 F2 N2 O5 P
FORMUL 3 HOH *203(H2 O)
HELIX 1 1 SER A 2 ALA A 13 1 12
HELIX 2 2 ARG A 15 LEU A 20 1 6
HELIX 3 3 GLY A 51 HIS A 54 5 4
HELIX 4 4 HIS A 55 GLY A 70 1 16
HELIX 5 5 SER A 83 GLY A 98 1 16
HELIX 6 6 SER A 107 MET A 120 1 14
HELIX 7 7 HIS A 133 SER A 143 1 11
HELIX 8 8 ASP A 154 SER A 164 1 11
HELIX 9 9 PRO A 186 HIS A 197 1 12
HELIX 10 10 GLY A 213 ARG A 217 5 5
HELIX 11 11 GLY A 218 GLN A 223 1 6
HELIX 12 12 SER A 248 ALA A 259 1 12
HELIX 13 13 ALA A 259 TYR A 264 1 6
HELIX 14 14 PRO A 269 SER A 285 1 17
HELIX 15 15 SER A 285 GLN A 307 1 23
HELIX 16 16 ASP A 327 GLN A 341 1 15
HELIX 17 17 GLU A 369 ASN A 383 1 15
SHEET 1 A 3 TRP A 33 ALA A 36 0
SHEET 2 A 3 ARG A 39 ASN A 43 -1 O ARG A 39 N ALA A 36
SHEET 3 A 3 CYS A 343 TRP A 344 1 O TRP A 344 N LEU A 42
SHEET 1 B 7 ARG A 101 PHE A 105 0
SHEET 2 B 7 ALA A 243 CYS A 247 -1 O ALA A 243 N PHE A 105
SHEET 3 B 7 LEU A 229 THR A 233 -1 N LEU A 230 O LEU A 246
SHEET 4 B 7 TRP A 200 ASP A 204 1 N VAL A 203 O VAL A 231
SHEET 5 B 7 GLN A 170 GLU A 175 1 N VAL A 172 O MET A 202
SHEET 6 B 7 ARG A 125 ASP A 129 1 N ALA A 127 O VAL A 173
SHEET 7 B 7 GLN A 146 PHE A 150 1 O GLN A 146 N ILE A 126
SHEET 1 C 4 THR A 312 LEU A 313 0
SHEET 2 C 4 ILE A 320 GLY A 326 -1 O ILE A 324 N THR A 312
SHEET 3 C 4 ALA A 358 THR A 363 -1 O LEU A 362 N GLN A 321
SHEET 4 C 4 ALA A 347 ILE A 348 -1 N ILE A 348 O ARG A 359
LINK NZ LYS A 236 CBF LLF A 436 1555 1555 1.51
CISPEP 1 PRO A 350 PRO A 351 0 11.83
SITE 1 AC1 20 ASN A 47 GLY A 75 SER A 107 GLY A 108
SITE 2 AC1 20 PHE A 109 HIS A 133 SER A 135 GLU A 175
SITE 3 AC1 20 SER A 179 ASP A 204 ALA A 206 HIS A 207
SITE 4 AC1 20 LYS A 236 TYR A 264 SER A 265 THR A 266
SITE 5 AC1 20 HOH A 444 HOH A 507 HOH A 565 HOH A 633
CRYST1 58.670 58.670 198.970 90.00 90.00 120.00 P 31 1 2 6
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.017044 0.009841 0.000000 0.00000
SCALE2 0.000000 0.019681 0.000000 0.00000
SCALE3 0.000000 0.000000 0.005026 0.00000