HEADER TRANSFERASE 26-FEB-06 2G6W TITLE SUICIDE INHIBITION OF A-OXAMINE SYNTHASE: STRUCTURES OF THE COVALENT TITLE 2 ADDUCTS OF 8-AMINO-7-OXONANOATE SYNTHASE WITH TRIFLUOROALANINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 8-AMINO-7-OXONONANOATE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AONS, 8-AMINO-7-KETOPELARGONATE SYNTHASE, 7-KETO-8-AMINO- COMPND 5 PELARGONIC ACID SYNTHETASE, 7-KAP SYNTHETASE, L-ALANINE-PIMELYL COA COMPND 6 LIGASE; COMPND 7 EC: 2.3.1.47; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BIOTIN, 8-AMINO-7-OXONANOATE, SYNTHASE, PLP, FLUOROALANINE, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.ALEXEEV REVDAT 5 20-NOV-24 2G6W 1 REMARK LINK REVDAT 4 18-OCT-17 2G6W 1 REMARK REVDAT 3 13-JUL-11 2G6W 1 VERSN REVDAT 2 24-FEB-09 2G6W 1 VERSN REVDAT 1 25-APR-06 2G6W 0 JRNL AUTH D.ALEXEEV,R.L.BAXTER,D.J.CAMPOPIANO,O.KERBARH,L.SAWYER, JRNL AUTH 2 N.TOMCZYK,R.WATT,S.P.WEBSTER JRNL TITL SUICIDE INHIBITION OF ALPHA-OXAMINE SYNTHASES: STRUCTURES OF JRNL TITL 2 THE COVALENT ADDUCTS OF 8-AMINO-7-OXONONANOATE SYNTHASE WITH JRNL TITL 3 TRIFLUOROALANINE. JRNL REF ORG.BIOMOL.CHEM. V. 4 1209 2006 JRNL REFN ISSN 1477-0520 JRNL PMID 16557306 JRNL DOI 10.1039/B517922J REMARK 2 REMARK 2 RESOLUTION. 2.14 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.14 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.41 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 20556 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 689 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.14 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.20 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1450 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.61 REMARK 3 BIN R VALUE (WORKING SET) : 0.1980 REMARK 3 BIN FREE R VALUE SET COUNT : 53 REMARK 3 BIN FREE R VALUE : 0.3900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2919 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 203 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.31000 REMARK 3 B22 (A**2) : -0.31000 REMARK 3 B33 (A**2) : 0.47000 REMARK 3 B12 (A**2) : -0.16000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.243 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.212 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.163 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.274 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2997 ; 0.022 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4070 ; 2.011 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 382 ; 6.338 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 137 ;34.520 ;23.212 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 479 ;19.364 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;21.475 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 450 ; 0.155 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2301 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1422 ; 0.260 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2029 ; 0.322 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 330 ; 0.213 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 91 ; 0.216 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 28 ; 0.178 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1952 ; 1.943 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3011 ; 2.877 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1194 ; 2.131 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1059 ; 3.039 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 384 REMARK 3 ORIGIN FOR THE GROUP (A): 5.6819 -1.9936 46.4329 REMARK 3 T TENSOR REMARK 3 T11: 0.1183 T22: 0.0012 REMARK 3 T33: 0.0750 T12: -0.0035 REMARK 3 T13: -0.0705 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 0.3647 L22: 0.6415 REMARK 3 L33: 0.9263 L12: -0.4844 REMARK 3 L13: 0.2968 L23: 0.0664 REMARK 3 S TENSOR REMARK 3 S11: -0.0940 S12: -0.0106 S13: 0.1787 REMARK 3 S21: -0.0008 S22: 0.0324 S23: -0.1153 REMARK 3 S31: -0.1820 S32: 0.0799 S33: 0.0617 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2G6W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000036763. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9076 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22100 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULPHATE, 200MM BIS REMARK 280 -TRIS, PH 7.0, EVAPORATION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 1 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -Y,-X,-Z+2/3 REMARK 290 5555 -X+Y,Y,-Z+1/3 REMARK 290 6555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.32333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 132.64667 REMARK 290 SMTRY1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 132.64667 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 66.32333 REMARK 290 SMTRY1 6 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE SECOND PART OF THE BIOLOGICAL ASSEMBLY IS GENERATED REMARK 300 BY THE CRYSTALLOGRAPHIC TWO FOLD AXIS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 9630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 66.32333 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS A 122 O HOH A 622 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 149 CG ARG A 149 CD 0.180 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 11 -74.83 -83.30 REMARK 500 ALA A 16 -88.50 -65.70 REMARK 500 ALA A 17 19.96 -58.21 REMARK 500 ASP A 18 -112.24 -89.49 REMARK 500 ASP A 37 48.58 36.71 REMARK 500 ILE A 71 -85.15 -105.68 REMARK 500 VAL A 79 -116.67 -127.00 REMARK 500 ASN A 153 19.21 57.95 REMARK 500 ASP A 205 40.60 -105.45 REMARK 500 GLN A 215 21.26 48.73 REMARK 500 LYS A 236 -104.75 -111.22 REMARK 500 VAL A 240 -109.08 -132.66 REMARK 500 SER A 241 160.33 178.24 REMARK 500 ALA A 358 120.21 -36.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LLF A 436 DBREF 2G6W A 1 384 UNP P12998 BIOF_ECOLI 1 384 SEQRES 1 A 384 MET SER TRP GLN GLU LYS ILE ASN ALA ALA LEU ASP ALA SEQRES 2 A 384 ARG ARG ALA ALA ASP ALA LEU ARG ARG ARG TYR PRO VAL SEQRES 3 A 384 ALA GLN GLY ALA GLY ARG TRP LEU VAL ALA ASP ASP ARG SEQRES 4 A 384 GLN TYR LEU ASN PHE SER SER ASN ASP TYR LEU GLY LEU SEQRES 5 A 384 SER HIS HIS PRO GLN ILE ILE ARG ALA TRP GLN GLN GLY SEQRES 6 A 384 ALA GLU GLN PHE GLY ILE GLY SER GLY GLY SER GLY HIS SEQRES 7 A 384 VAL SER GLY TYR SER VAL VAL HIS GLN ALA LEU GLU GLU SEQRES 8 A 384 GLU LEU ALA GLU TRP LEU GLY TYR SER ARG ALA LEU LEU SEQRES 9 A 384 PHE ILE SER GLY PHE ALA ALA ASN GLN ALA VAL ILE ALA SEQRES 10 A 384 ALA MET MET ALA LYS GLU ASP ARG ILE ALA ALA ASP ARG SEQRES 11 A 384 LEU SER HIS ALA SER LEU LEU GLU ALA ALA SER LEU SER SEQRES 12 A 384 PRO SER GLN LEU ARG ARG PHE ALA HIS ASN ASP VAL THR SEQRES 13 A 384 HIS LEU ALA ARG LEU LEU ALA SER PRO CYS PRO GLY GLN SEQRES 14 A 384 GLN MET VAL VAL THR GLU GLY VAL PHE SER MET ASP GLY SEQRES 15 A 384 ASP SER ALA PRO LEU ALA GLU ILE GLN GLN VAL THR GLN SEQRES 16 A 384 GLN HIS ASN GLY TRP LEU MET VAL ASP ASP ALA HIS GLY SEQRES 17 A 384 THR GLY VAL ILE GLY GLU GLN GLY ARG GLY SER CYS TRP SEQRES 18 A 384 LEU GLN LYS VAL LYS PRO GLU LEU LEU VAL VAL THR PHE SEQRES 19 A 384 GLY LYS GLY PHE GLY VAL SER GLY ALA ALA VAL LEU CYS SEQRES 20 A 384 SER SER THR VAL ALA ASP TYR LEU LEU GLN PHE ALA ARG SEQRES 21 A 384 HIS LEU ILE TYR SER THR SER MET PRO PRO ALA GLN ALA SEQRES 22 A 384 GLN ALA LEU ARG ALA SER LEU ALA VAL ILE ARG SER ASP SEQRES 23 A 384 GLU GLY ASP ALA ARG ARG GLU LYS LEU ALA ALA LEU ILE SEQRES 24 A 384 THR ARG PHE ARG ALA GLY VAL GLN ASP LEU PRO PHE THR SEQRES 25 A 384 LEU ALA ASP SER CYS SER ALA ILE GLN PRO LEU ILE VAL SEQRES 26 A 384 GLY ASP ASN SER ARG ALA LEU GLN LEU ALA GLU LYS LEU SEQRES 27 A 384 ARG GLN GLN GLY CYS TRP VAL THR ALA ILE ARG PRO PRO SEQRES 28 A 384 THR VAL PRO ALA GLY THR ALA ARG LEU ARG LEU THR LEU SEQRES 29 A 384 THR ALA ALA HIS GLU MET GLN ASP ILE ASP ARG LEU LEU SEQRES 30 A 384 GLU VAL LEU HIS GLY ASN GLY HET LLF A 436 20 HETNAM LLF (4-{(E)-[(2,2-DIFLUOROETHYL)IMINO]METHYL}-5-HYDROXY-6- HETNAM 2 LLF METHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE HETSYN LLF (E)-N-(2,2-DIFLUOROETHYL)PYRIDOXIMINE-5'-PHOSPHATE FORMUL 2 LLF C10 H13 F2 N2 O5 P FORMUL 3 HOH *203(H2 O) HELIX 1 1 SER A 2 ALA A 13 1 12 HELIX 2 2 ARG A 15 LEU A 20 1 6 HELIX 3 3 GLY A 51 HIS A 54 5 4 HELIX 4 4 HIS A 55 GLY A 70 1 16 HELIX 5 5 SER A 83 GLY A 98 1 16 HELIX 6 6 SER A 107 MET A 120 1 14 HELIX 7 7 HIS A 133 SER A 143 1 11 HELIX 8 8 ASP A 154 SER A 164 1 11 HELIX 9 9 PRO A 186 HIS A 197 1 12 HELIX 10 10 GLY A 213 ARG A 217 5 5 HELIX 11 11 GLY A 218 GLN A 223 1 6 HELIX 12 12 SER A 248 ALA A 259 1 12 HELIX 13 13 ALA A 259 TYR A 264 1 6 HELIX 14 14 PRO A 269 SER A 285 1 17 HELIX 15 15 SER A 285 GLN A 307 1 23 HELIX 16 16 ASP A 327 GLN A 341 1 15 HELIX 17 17 GLU A 369 ASN A 383 1 15 SHEET 1 A 3 TRP A 33 ALA A 36 0 SHEET 2 A 3 ARG A 39 ASN A 43 -1 O ARG A 39 N ALA A 36 SHEET 3 A 3 CYS A 343 TRP A 344 1 O TRP A 344 N LEU A 42 SHEET 1 B 7 ARG A 101 PHE A 105 0 SHEET 2 B 7 ALA A 243 CYS A 247 -1 O ALA A 243 N PHE A 105 SHEET 3 B 7 LEU A 229 THR A 233 -1 N LEU A 230 O LEU A 246 SHEET 4 B 7 TRP A 200 ASP A 204 1 N VAL A 203 O VAL A 231 SHEET 5 B 7 GLN A 170 GLU A 175 1 N VAL A 172 O MET A 202 SHEET 6 B 7 ARG A 125 ASP A 129 1 N ALA A 127 O VAL A 173 SHEET 7 B 7 GLN A 146 PHE A 150 1 O GLN A 146 N ILE A 126 SHEET 1 C 4 THR A 312 LEU A 313 0 SHEET 2 C 4 ILE A 320 GLY A 326 -1 O ILE A 324 N THR A 312 SHEET 3 C 4 ALA A 358 THR A 363 -1 O LEU A 362 N GLN A 321 SHEET 4 C 4 ALA A 347 ILE A 348 -1 N ILE A 348 O ARG A 359 LINK NZ LYS A 236 CBF LLF A 436 1555 1555 1.51 CISPEP 1 PRO A 350 PRO A 351 0 11.83 SITE 1 AC1 20 ASN A 47 GLY A 75 SER A 107 GLY A 108 SITE 2 AC1 20 PHE A 109 HIS A 133 SER A 135 GLU A 175 SITE 3 AC1 20 SER A 179 ASP A 204 ALA A 206 HIS A 207 SITE 4 AC1 20 LYS A 236 TYR A 264 SER A 265 THR A 266 SITE 5 AC1 20 HOH A 444 HOH A 507 HOH A 565 HOH A 633 CRYST1 58.670 58.670 198.970 90.00 90.00 120.00 P 31 1 2 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017044 0.009841 0.000000 0.00000 SCALE2 0.000000 0.019681 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005026 0.00000