HEADER TRANSCRIPTION 28-FEB-06 2G7G TITLE THE CRYSTAL STRUCTURE OF THE PUTATIVE TRANSCRIPTIONAL REGULATOR TITLE 2 RHA04620 FROM RHODOCOCCUS SP. RHA1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RHA04620, PUTATIVE TRANSCRIPTIONAL REGULATOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RHA04620; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOCOCCUS SP.; SOURCE 3 ORGANISM_TAXID: 101510; SOURCE 4 STRAIN: RHA1; SOURCE 5 GENE: RHA04620; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS HELIX-TURN-HELIX, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, KEYWDS 3 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,A.JOACHIMIAK,E.EVDOKIMOVA,O.KAGAN,A.SAVCHENKO,A.M.EDWARDS, AUTHOR 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 5 30-OCT-24 2G7G 1 REMARK LINK REVDAT 4 13-JUL-11 2G7G 1 VERSN REVDAT 3 28-JUL-09 2G7G 1 AUTHOR JRNL REMARK REVDAT 2 24-FEB-09 2G7G 1 VERSN REVDAT 1 28-MAR-06 2G7G 0 JRNL AUTH Y.KIM,A.JOACHIMIAK,E.EVDOKIMOVA,O.KAGAN,A.SAVCHENKO, JRNL AUTH 2 A.M.EDWARDS JRNL TITL THE CRYSTAL STRUCTURE OF THE PUTATIVE TRANSCRIPTIONAL JRNL TITL 2 REGULATOR RHA04620 FROM RHODOCOCCUS SP. RHA1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 12402 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1375 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.01 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.06 REMARK 3 REFLECTION IN BIN (WORKING SET) : 668 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.2110 REMARK 3 BIN FREE R VALUE SET COUNT : 89 REMARK 3 BIN FREE R VALUE : 0.3010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1510 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 126 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.44000 REMARK 3 B22 (A**2) : 1.44000 REMARK 3 B33 (A**2) : -2.88000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.226 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.192 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.122 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.480 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1658 ; 0.014 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2263 ; 1.283 ; 1.939 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 216 ; 5.013 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 86 ;32.231 ;21.977 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 254 ;16.092 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;18.440 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 244 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1342 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 750 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1150 ; 0.296 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 113 ; 0.184 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 77 ; 0.264 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.186 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1079 ; 0.963 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1665 ; 1.592 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 643 ; 2.593 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 598 ; 4.021 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 205 REMARK 3 ORIGIN FOR THE GROUP (A): 25.0840 28.6835 8.3470 REMARK 3 T TENSOR REMARK 3 T11: -0.0736 T22: -0.0445 REMARK 3 T33: -0.1083 T12: 0.0425 REMARK 3 T13: -0.0164 T23: 0.0471 REMARK 3 L TENSOR REMARK 3 L11: 0.0879 L22: 0.3439 REMARK 3 L33: 0.4936 L12: 0.1528 REMARK 3 L13: 0.0318 L23: 0.2255 REMARK 3 S TENSOR REMARK 3 S11: 0.0255 S12: -0.0516 S13: -0.0564 REMARK 3 S21: 0.0109 S22: -0.0119 S23: -0.0507 REMARK 3 S31: -0.0228 S32: 0.0038 S33: -0.0136 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2G7G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAR-06. REMARK 100 THE DEPOSITION ID IS D_1000036783. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97935 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR, REMARK 200 SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13817 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 44.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 21.70 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.9 REMARK 200 DATA REDUNDANCY IN SHELL : 11.70 REMARK 200 R MERGE FOR SHELL (I) : 0.36500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.440 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, MLPHARE, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.9 M AMMONIUM ACETATE, 0.1M SODIUM REMARK 280 ACETATE, PH 4.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 20.23600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 49.75400 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 49.75400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 10.11800 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 49.75400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 49.75400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 30.35400 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 49.75400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.75400 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 10.11800 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 49.75400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.75400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 30.35400 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 20.23600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: DIMER, THE OTHER MONOMER IS GENERATED BY APPLYING THE REMARK 300 OPERATOR: Y, X, -Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 5270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 334 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 GLY A 2 REMARK 465 ARG A 3 REMARK 465 PRO A 4 REMARK 465 ARG A 5 REMARK 465 VAL A 6 REMARK 465 ALA A 7 REMARK 465 ARG A 8 REMARK 465 ALA A 206 REMARK 465 VAL A 207 REMARK 465 GLN A 208 REMARK 465 ARG A 209 REMARK 465 GLY A 210 REMARK 465 SER A 211 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ASP A 166 O HOH A 427 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC6039 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 NO SUITABLE SEQUENCE DATABASE WAS AVAILABLE AT THE REMARK 999 TIME OF PROCESSING THIS FILE DBREF 2G7G A 1 209 UNP Q0S9X7 Q0S9X7_RHOSR 1 209 SEQRES 1 A 213 GLY HIS MSE GLY ARG PRO ARG VAL ALA ARG LEU ASP ARG SEQRES 2 A 213 GLU ARG ILE ALA GLU ALA ALA LEU GLU LEU VAL ASP ARG SEQRES 3 A 213 ASP GLY ASP PHE ARG MSE PRO ASP LEU ALA ARG HIS LEU SEQRES 4 A 213 ASN VAL GLN VAL SER SER ILE TYR HIS HIS ALA LYS GLY SEQRES 5 A 213 ARG ALA ALA VAL VAL GLU LEU VAL ARG HIS ARG VAL VAL SEQRES 6 A 213 ARG GLU ILE ASP GLY SER ALA PHE GLU ARG LEU PRO TRP SEQRES 7 A 213 ASP GLU ALA PHE SER GLU TRP ALA ARG SER TYR ARG ALA SEQRES 8 A 213 ALA PHE SER ARG HIS PRO THR ALA ILE ARG LEU LEU ALA SEQRES 9 A 213 THR GLU THR VAL ARG ASP PRO GLY SER LEU SER VAL TYR SEQRES 10 A 213 HIS SER ALA ALA ALA GLY LEU ARG GLY ALA GLY PHE PRO SEQRES 11 A 213 ASP ASP HIS ILE MSE ALA VAL ILE THR ALA ALA GLU ASN SEQRES 12 A 213 PHE LEU LEU GLY ALA ALA LEU ASP ALA ALA ALA PRO GLU SEQRES 13 A 213 VAL MSE ILE GLU ALA ASP SER THR THR THR ASP ASP ALA SEQRES 14 A 213 LEU THR ARG ALA LEU ALA ALA ALA PRO ARG GLY PRO GLU SEQRES 15 A 213 ARG ALA GLU GLN ALA PHE GLU LEU GLY LEU ALA ALA LEU SEQRES 16 A 213 LEU ALA GLY PHE HIS HIS LEU LEU GLN GLU CYS GLY ALA SEQRES 17 A 213 VAL GLN ARG GLY SER MODRES 2G7G MSE A 30 MET SELENOMETHIONINE MODRES 2G7G MSE A 133 MET SELENOMETHIONINE MODRES 2G7G MSE A 156 MET SELENOMETHIONINE HET MSE A 30 8 HET MSE A 133 8 HET MSE A 156 8 HET ACY A 301 4 HET ACY A 302 4 HETNAM MSE SELENOMETHIONINE HETNAM ACY ACETIC ACID FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 ACY 2(C2 H4 O2) FORMUL 4 HOH *126(H2 O) HELIX 1 1 ASP A 10 GLY A 26 1 17 HELIX 2 2 ARG A 29 LEU A 37 1 9 HELIX 3 3 GLN A 40 HIS A 46 1 7 HELIX 4 4 LYS A 49 ARG A 64 1 16 HELIX 5 5 GLY A 68 ARG A 73 5 6 HELIX 6 6 PRO A 75 ARG A 93 1 19 HELIX 7 7 HIS A 94 THR A 96 5 3 HELIX 8 8 ALA A 97 THR A 103 1 7 HELIX 9 9 ASP A 108 GLY A 126 1 19 HELIX 10 10 PRO A 128 ALA A 152 1 25 HELIX 11 11 ASP A 166 ALA A 175 1 10 HELIX 12 12 PRO A 179 CYS A 204 1 26 LINK C AARG A 29 N MSE A 30 1555 1555 1.33 LINK C BARG A 29 N MSE A 30 1555 1555 1.33 LINK C MSE A 30 N PRO A 31 1555 1555 1.36 LINK C ILE A 132 N MSE A 133 1555 1555 1.33 LINK C MSE A 133 N ALA A 134 1555 1555 1.32 LINK C VAL A 155 N MSE A 156 1555 1555 1.33 LINK C MSE A 156 N ILE A 157 1555 1555 1.33 SITE 1 AC1 8 GLY A 50 ARG A 51 HIS A 116 ASP A 166 SITE 2 AC1 8 ALA A 167 HOH A 327 HOH A 403 HOH A 420 SITE 1 AC2 5 ARG A 107 THR A 163 THR A 164 ASP A 165 SITE 2 AC2 5 HOH A 427 CRYST1 99.508 99.508 40.472 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010049 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010049 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024708 0.00000 HETATM 184 N MSE A 30 4.129 18.846 7.183 1.00 46.08 N HETATM 185 CA MSE A 30 3.382 19.004 8.438 1.00 46.29 C HETATM 186 C MSE A 30 2.764 17.712 9.002 1.00 46.80 C HETATM 187 O MSE A 30 3.010 17.413 10.170 1.00 46.68 O HETATM 188 CB MSE A 30 2.359 20.147 8.374 1.00 45.81 C HETATM 189 CG MSE A 30 2.978 21.557 8.359 1.00 47.48 C HETATM 190 SE MSE A 30 3.919 21.977 10.035 0.75 52.98 SE HETATM 191 CE MSE A 30 2.475 21.630 11.198 1.00 48.17 C HETATM 1046 N MSE A 133 24.312 44.863 4.335 1.00 43.24 N HETATM 1047 CA MSE A 133 23.648 43.581 4.084 1.00 44.50 C HETATM 1048 C MSE A 133 24.419 42.665 3.086 1.00 43.52 C HETATM 1049 O MSE A 133 24.456 41.451 3.262 1.00 45.44 O HETATM 1050 CB MSE A 133 22.196 43.783 3.644 1.00 45.01 C HETATM 1051 CG MSE A 133 21.315 44.433 4.733 1.00 48.50 C HETATM 1052 SE MSE A 133 21.524 43.577 6.483 0.75 59.92 SE HETATM 1053 CE MSE A 133 21.074 41.698 5.969 1.00 53.25 C HETATM 1203 N MSE A 156 38.181 15.060 -2.091 1.00 45.50 N HETATM 1204 CA MSE A 156 37.036 15.549 -2.878 1.00 47.24 C HETATM 1205 C MSE A 156 37.282 15.531 -4.368 1.00 48.97 C HETATM 1206 O MSE A 156 36.339 15.686 -5.144 1.00 48.87 O HETATM 1207 CB MSE A 156 36.616 16.963 -2.454 1.00 47.67 C HETATM 1208 CG MSE A 156 35.483 16.969 -1.468 1.00 47.17 C HETATM 1209 SE MSE A 156 33.856 16.096 -2.147 0.75 48.35 SE HETATM 1210 CE MSE A 156 33.336 17.481 -3.557 1.00 44.40 C TER 1609 GLY A 205 HETATM 1610 C ACY A 301 22.194 49.511 17.037 1.00 51.19 C HETATM 1611 O ACY A 301 21.529 49.216 16.026 1.00 50.44 O HETATM 1612 OXT ACY A 301 22.389 48.755 18.028 1.00 51.83 O HETATM 1613 CH3 ACY A 301 22.832 50.851 17.057 1.00 50.16 C HETATM 1614 C ACY A 302 54.402 14.810 -16.924 1.00 63.51 C HETATM 1615 O ACY A 302 53.986 15.784 -16.259 1.00 63.53 O HETATM 1616 OXT ACY A 302 54.514 13.653 -16.465 1.00 63.31 O HETATM 1617 CH3 ACY A 302 54.796 15.060 -18.353 1.00 63.47 C HETATM 1618 O HOH A 303 3.952 21.099 4.908 1.00 27.15 O HETATM 1619 O HOH A 304 36.332 24.333 3.097 1.00 32.08 O HETATM 1620 O HOH A 305 27.066 44.581 17.692 1.00 39.29 O HETATM 1621 O HOH A 306 40.634 16.486 -2.692 1.00 38.02 O HETATM 1622 O HOH A 307 32.653 47.223 15.281 1.00 38.85 O HETATM 1623 O HOH A 308 21.918 17.243 8.042 1.00 44.29 O HETATM 1624 O HOH A 309 34.872 23.977 5.549 1.00 33.35 O HETATM 1625 O HOH A 310 21.404 40.397 1.196 1.00 41.84 O HETATM 1626 O HOH A 311 20.638 32.713 1.070 1.00 35.64 O HETATM 1627 O HOH A 312 38.567 17.839 4.665 1.00 43.16 O HETATM 1628 O HOH A 313 36.357 10.984 4.241 1.00 53.13 O HETATM 1629 O HOH A 314 23.754 36.721 19.151 1.00 54.56 O HETATM 1630 O HOH A 315 17.433 21.382 2.941 1.00 33.69 O HETATM 1631 O HOH A 316 22.799 47.137 3.203 1.00 41.15 O HETATM 1632 O HOH A 317 32.688 44.600 16.201 1.00 39.38 O HETATM 1633 O HOH A 318 35.692 17.477 4.631 1.00 36.49 O HETATM 1634 O HOH A 319 26.224 55.005 5.483 1.00 56.53 O HETATM 1635 O HOH A 320 21.349 21.213 2.086 1.00 34.86 O HETATM 1636 O HOH A 321 38.893 35.939 16.345 1.00 45.05 O HETATM 1637 O HOH A 322 41.926 22.618 0.600 1.00 42.12 O HETATM 1638 O HOH A 323 8.414 30.126 14.833 1.00 42.04 O HETATM 1639 O HOH A 324 35.330 47.488 14.972 1.00 38.40 O HETATM 1640 O HOH A 325 23.853 45.847 1.162 1.00 43.07 O HETATM 1641 O HOH A 326 37.796 10.717 1.357 1.00 49.55 O HETATM 1642 O HOH A 327 3.284 28.848 6.770 1.00 48.41 O HETATM 1643 O HOH A 328 19.707 30.824 8.646 1.00 48.18 O HETATM 1644 O HOH A 329 22.864 39.089 19.093 1.00 52.29 O HETATM 1645 O HOH A 330 34.434 32.331 20.313 1.00 45.86 O HETATM 1646 O HOH A 331 41.701 32.366 8.480 1.00 45.81 O HETATM 1647 O HOH A 332 37.300 27.313 13.258 1.00 46.59 O HETATM 1648 O HOH A 333 37.465 19.818 8.156 1.00 44.88 O HETATM 1649 O HOH A 334 22.747 22.738 0.000 0.50 40.45 O HETATM 1650 O HOH A 335 -8.279 21.535 14.993 1.00 44.42 O HETATM 1651 O HOH A 336 33.624 31.112 17.654 1.00 39.70 O HETATM 1652 O HOH A 337 31.269 23.072 -0.577 1.00 39.40 O HETATM 1653 O HOH A 338 15.066 39.828 17.519 1.00 48.73 O HETATM 1654 O HOH A 339 15.444 25.225 -3.197 1.00 51.02 O HETATM 1655 O HOH A 340 32.826 49.567 -5.230 1.00 51.91 O HETATM 1656 O HOH A 341 24.879 54.181 2.688 1.00 59.35 O HETATM 1657 O HOH A 342 14.185 27.470 -3.481 1.00 59.07 O HETATM 1658 O HOH A 343 30.119 49.955 -4.953 1.00 60.39 O HETATM 1659 O HOH A 344 53.326 18.959 -5.494 1.00 51.62 O HETATM 1660 O HOH A 345 42.423 15.141 0.847 1.00 43.82 O HETATM 1661 O HOH A 346 10.303 30.762 7.457 1.00 46.25 O HETATM 1662 O HOH A 347 27.451 33.302 23.758 1.00 69.39 O HETATM 1663 O HOH A 348 10.350 32.238 2.478 1.00 41.74 O HETATM 1664 O HOH A 349 48.401 14.470 -7.095 1.00 47.76 O HETATM 1665 O HOH A 350 23.943 34.783 11.229 1.00 57.53 O HETATM 1666 O HOH A 351 40.797 19.024 -3.018 1.00 51.68 O HETATM 1667 O HOH A 352 20.199 32.402 5.848 1.00 57.94 O HETATM 1668 O HOH A 353 11.483 30.742 15.968 1.00 55.76 O HETATM 1669 O HOH A 354 10.367 20.878 26.522 1.00 74.32 O HETATM 1670 O HOH A 355 19.440 19.457 1.240 0.50 44.90 O HETATM 1671 O HOH A 356 36.146 17.310 7.481 1.00 56.40 O HETATM 1672 O HOH A 357 46.317 13.361 -8.241 1.00 54.73 O HETATM 1673 O HOH A 358 20.425 12.772 5.395 1.00 66.88 O HETATM 1674 O HOH A 359 36.469 49.674 14.057 1.00 53.95 O HETATM 1675 O HOH A 360 40.383 34.117 11.555 1.00 53.11 O HETATM 1676 O HOH A 361 43.981 12.184 -7.464 1.00 48.58 O HETATM 1677 O HOH A 362 33.599 47.175 -3.550 1.00 52.00 O HETATM 1678 O HOH A 363 22.335 44.908 18.523 1.00 52.66 O HETATM 1679 O HOH A 364 13.965 25.838 21.987 1.00 64.63 O HETATM 1680 O HOH A 365 12.977 26.431 0.240 1.00 40.69 O HETATM 1681 O HOH A 366 37.486 50.177 11.468 1.00 63.12 O HETATM 1682 O HOH A 367 56.870 19.987 -7.713 1.00 72.91 O HETATM 1683 O HOH A 368 38.643 8.406 -2.316 1.00 68.24 O HETATM 1684 O HOH A 369 36.217 45.428 -2.208 1.00 56.00 O HETATM 1685 O HOH A 370 20.934 54.657 5.727 1.00 56.25 O HETATM 1686 O HOH A 371 9.911 25.113 24.271 1.00 58.00 O HETATM 1687 O HOH A 372 2.470 18.888 25.555 1.00 55.08 O HETATM 1688 O HOH A 373 47.161 11.157 -18.066 1.00 90.47 O HETATM 1689 O HOH A 374 20.595 35.322 19.058 1.00 49.24 O HETATM 1690 O HOH A 375 39.208 48.385 10.570 1.00 54.70 O HETATM 1691 O HOH A 376 21.062 42.443 18.856 1.00 53.92 O HETATM 1692 O HOH A 377 18.216 42.914 18.670 1.00 58.25 O HETATM 1693 O HOH A 378 50.029 19.717 3.748 1.00 71.45 O HETATM 1694 O HOH A 379 -3.041 15.502 11.498 1.00 60.38 O HETATM 1695 O HOH A 380 49.607 7.761 -11.355 1.00 68.32 O HETATM 1696 O HOH A 381 20.314 32.898 9.855 1.00 56.29 O HETATM 1697 O HOH A 382 14.978 24.001 20.161 1.00 61.80 O HETATM 1698 O HOH A 383 38.127 53.865 7.551 1.00 76.15 O HETATM 1699 O HOH A 384 10.875 15.279 19.620 1.00 68.30 O HETATM 1700 O HOH A 385 30.850 34.882 18.142 1.00 49.34 O HETATM 1701 O HOH A 386 8.729 32.795 8.528 1.00 50.92 O HETATM 1702 O HOH A 387 49.467 17.312 4.872 1.00 64.85 O HETATM 1703 O HOH A 388 17.566 12.706 11.137 1.00 58.11 O HETATM 1704 O HOH A 389 16.871 19.736 0.116 1.00 54.02 O HETATM 1705 O HOH A 390 13.983 32.992 18.555 1.00 49.61 O HETATM 1706 O HOH A 391 33.986 26.461 12.226 1.00 48.96 O HETATM 1707 O HOH A 392 44.031 16.361 9.326 1.00 95.24 O HETATM 1708 O HOH A 393 7.387 27.700 4.447 1.00 58.08 O HETATM 1709 O HOH A 394 8.374 14.822 6.547 1.00 48.79 O HETATM 1710 O HOH A 395 21.657 33.652 3.503 1.00 61.49 O HETATM 1711 O HOH A 396 9.028 29.832 5.255 1.00 50.83 O HETATM 1712 O HOH A 397 17.995 31.568 17.343 1.00 62.67 O HETATM 1713 O HOH A 398 52.408 18.269 -17.506 1.00 52.83 O HETATM 1714 O HOH A 399 36.259 47.085 -4.049 1.00 68.61 O HETATM 1715 O HOH A 400 32.999 22.512 11.220 1.00 59.82 O HETATM 1716 O HOH A 401 37.288 48.745 -6.673 1.00 72.06 O HETATM 1717 O HOH A 402 18.693 11.440 15.980 1.00 90.57 O HETATM 1718 O HOH A 403 24.215 51.754 14.576 1.00 60.92 O HETATM 1719 O HOH A 404 46.195 16.028 7.979 1.00 67.63 O HETATM 1720 O HOH A 405 22.050 54.848 2.677 1.00 59.38 O HETATM 1721 O HOH A 406 41.080 34.820 9.296 1.00 51.69 O HETATM 1722 O HOH A 407 27.777 16.486 9.174 1.00 63.82 O HETATM 1723 O HOH A 408 1.404 12.099 5.622 1.00 70.79 O HETATM 1724 O HOH A 409 10.743 14.864 5.629 1.00 50.81 O HETATM 1725 O HOH A 410 33.557 50.211 -2.899 1.00 62.47 O HETATM 1726 O HOH A 411 43.109 13.218 -4.943 1.00 56.34 O HETATM 1727 O HOH A 412 1.710 23.218 5.027 1.00 64.48 O HETATM 1728 O HOH A 413 19.320 13.526 12.732 1.00 61.07 O HETATM 1729 O HOH A 414 10.849 29.811 20.115 1.00 64.82 O HETATM 1730 O HOH A 415 47.372 13.867 -4.155 1.00 55.69 O HETATM 1731 O HOH A 416 19.441 20.936 23.496 1.00 62.59 O HETATM 1732 O HOH A 417 36.497 46.286 -6.400 1.00 64.73 O HETATM 1733 O HOH A 418 24.913 44.022 19.282 1.00 60.09 O HETATM 1734 O HOH A 419 21.751 34.103 11.869 1.00 67.69 O HETATM 1735 O HOH A 420 1.021 24.327 6.983 1.00 67.19 O HETATM 1736 O HOH A 421 13.458 26.006 18.503 1.00 72.78 O HETATM 1737 O HOH A 422 -3.177 28.757 11.470 1.00 74.06 O HETATM 1738 O HOH A 423 46.113 14.717 -11.144 1.00 66.25 O HETATM 1739 O HOH A 424 19.730 43.129 2.021 1.00 73.63 O HETATM 1740 O HOH A 425 20.848 30.400 6.799 1.00 53.54 O HETATM 1741 O HOH A 426 42.318 41.201 7.409 1.00 70.52 O HETATM 1742 O HOH A 427 51.879 16.076 -15.089 1.00 87.61 O HETATM 1743 O HOH A 428 47.906 17.023 6.522 1.00 59.82 O CONECT 166 184 CONECT 167 184 CONECT 184 166 167 185 CONECT 185 184 186 188 CONECT 186 185 187 192 CONECT 187 186 CONECT 188 185 189 CONECT 189 188 190 CONECT 190 189 191 CONECT 191 190 CONECT 192 186 CONECT 1040 1046 CONECT 1046 1040 1047 CONECT 1047 1046 1048 1050 CONECT 1048 1047 1049 1054 CONECT 1049 1048 CONECT 1050 1047 1051 CONECT 1051 1050 1052 CONECT 1052 1051 1053 CONECT 1053 1052 CONECT 1054 1048 CONECT 1198 1203 CONECT 1203 1198 1204 CONECT 1204 1203 1205 1207 CONECT 1205 1204 1206 1211 CONECT 1206 1205 CONECT 1207 1204 1208 CONECT 1208 1207 1209 CONECT 1209 1208 1210 CONECT 1210 1209 CONECT 1211 1205 CONECT 1610 1611 1612 1613 CONECT 1611 1610 CONECT 1612 1610 CONECT 1613 1610 CONECT 1614 1615 1616 1617 CONECT 1615 1614 CONECT 1616 1614 CONECT 1617 1614 MASTER 336 0 5 12 0 0 4 6 1644 1 39 17 END