data_2G9L # _entry.id 2G9L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2G9L pdb_00002g9l 10.2210/pdb2g9l/pdb RCSB RCSB036860 ? ? WWPDB D_1000036860 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2G9L _pdbx_database_status.recvd_initial_deposition_date 2006-03-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chi, S.-W.' 1 'Han, K.-H.' 2 # _citation.id primary _citation.title 'Solution structure and membrane interaction mode of an antimicrobial peptide gaegurin 4' _citation.journal_abbrev Biochem.Biophys.Res.Commun. _citation.journal_volume 352 _citation.page_first 592 _citation.page_last 597 _citation.year 2007 _citation.journal_id_ASTM BBRCA9 _citation.country US _citation.journal_id_ISSN 0006-291X _citation.journal_id_CSD 0146 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17141187 _citation.pdbx_database_id_DOI 10.1016/j.bbrc.2006.11.064 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chi, S.-W.' 1 ? primary 'Kim, J.-S.' 2 ? primary 'Kim, D.-H.' 3 ? primary 'Lee, S.-H.' 4 ? primary 'Park, Y.-H.' 5 ? primary 'Han, K.-H.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description Gaegurin-4 _entity.formula_weight 3755.494 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name ggn4 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GILDTLKQFAKGVGKDLVKGAAQGVLSTVSCKLAKTC _entity_poly.pdbx_seq_one_letter_code_can GILDTLKQFAKGVGKDLVKGAAQGVLSTVSCKLAKTC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ILE n 1 3 LEU n 1 4 ASP n 1 5 THR n 1 6 LEU n 1 7 LYS n 1 8 GLN n 1 9 PHE n 1 10 ALA n 1 11 LYS n 1 12 GLY n 1 13 VAL n 1 14 GLY n 1 15 LYS n 1 16 ASP n 1 17 LEU n 1 18 VAL n 1 19 LYS n 1 20 GLY n 1 21 ALA n 1 22 ALA n 1 23 GLN n 1 24 GLY n 1 25 VAL n 1 26 LEU n 1 27 SER n 1 28 THR n 1 29 VAL n 1 30 SER n 1 31 CYS n 1 32 LYS n 1 33 LEU n 1 34 ALA n 1 35 LYS n 1 36 THR n 1 37 CYS n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'The peptide was chemically synthesized. The sequence occurs naturally found in Korean frog, Rana rugosa.' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GGN4_RANRU _struct_ref.pdbx_db_accession P80398 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code GILDTLKQFAKGVGKDLVKGAAQGVLSTVSCKLAKTC _struct_ref.pdbx_align_begin 44 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2G9L _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 37 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P80398 _struct_ref_seq.db_align_beg 44 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 80 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 37 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 '2D NOESY' 1 2 1 '2D TOCSY' 1 3 1 DQF-COSY 1 4 2 '2D NOESY' 1 5 2 '2D TOCSY' 1 6 2 DQF-COSY 1 # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 298 1 4 0 atm K 2 283 1 4 0 atm K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '2mM ggn4, 80% CD3OH, 20% H2O' _pdbx_nmr_sample_details.solvent_system '80% CD3OH, 20% H2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2G9L _pdbx_nmr_refine.method 'distance geometry, molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 2G9L _pdbx_nmr_details.text 'This structure was determined using standard 2D homonuclear techniques.' # _pdbx_nmr_ensemble.entry_id 2G9L _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2G9L _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection VNMR 6.1B ? 1 processing Felix 98.0 ? 2 refinement Discover 2.98 ? 3 # _exptl.entry_id 2G9L _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2G9L _struct.title 'The High-resolution Solution Conformation of an Antimicrobial Peptide Gaegurin 4 and Its Mode of Membrane Interaction' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2G9L _struct_keywords.pdbx_keywords ANTIBIOTIC _struct_keywords.text 'amphipathic helix, ANTIBIOTIC' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 1 ? LYS A 11 ? GLY A 1 LYS A 11 1 ? 11 HELX_P HELX_P2 2 GLY A 14 ? ALA A 22 ? GLY A 14 ALA A 22 1 ? 9 HELX_P HELX_P3 3 VAL A 25 ? LYS A 32 ? VAL A 25 LYS A 32 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 31 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 37 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 31 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 37 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.034 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 24 A . ? GLY 24 A VAL 25 A ? VAL 25 A 1 0.78 2 GLY 1 A . ? GLY 1 A ILE 2 A ? ILE 2 A 5 -0.96 3 GLY 1 A . ? GLY 1 A ILE 2 A ? ILE 2 A 7 -1.24 4 GLY 24 A . ? GLY 24 A VAL 25 A ? VAL 25 A 9 -1.71 5 GLY 1 A . ? GLY 1 A ILE 2 A ? ILE 2 A 10 -1.62 # _database_PDB_matrix.entry_id 2G9L _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2G9L _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 ASP 4 4 4 ASP ASP A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 PHE 9 9 9 PHE PHE A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 GLN 23 23 23 GLN GLN A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 CYS 31 31 31 CYS CYS A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 CYS 37 37 37 CYS CYS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-01-16 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Experimental preparation' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_exptl_sample_conditions 3 4 'Structure model' pdbx_nmr_software 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_exptl_sample_conditions.pressure_units' 4 4 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A LEU 3 ? ? HD2 A LYS 7 ? ? 1.55 2 1 O A PHE 9 ? ? H A VAL 13 ? ? 1.59 3 2 O A THR 28 ? ? HB3 A LYS 32 ? ? 1.48 4 4 O A SER 27 ? ? H A CYS 31 ? ? 1.58 5 5 HD2 A LYS 32 ? ? HE3 A LYS 35 ? ? 1.13 6 5 HD3 A LYS 32 ? ? HD2 A LYS 35 ? ? 1.20 7 5 HD3 A LYS 32 ? ? HD3 A LYS 35 ? ? 1.28 8 5 HD3 A LYS 32 ? ? CD A LYS 35 ? ? 1.48 9 5 O A PHE 9 ? ? H A VAL 13 ? ? 1.54 10 5 CD A LYS 32 ? ? CD A LYS 35 ? ? 2.15 11 6 O A GLY 24 ? ? H A THR 28 ? ? 1.59 12 7 HB2 A CYS 31 ? ? HD2 A LYS 35 ? ? 0.60 13 7 HB2 A CYS 31 ? ? CD A LYS 35 ? ? 1.52 14 7 O A PHE 9 ? ? H A VAL 13 ? ? 1.58 15 7 CB A CYS 31 ? ? HD2 A LYS 35 ? ? 1.58 16 8 O A LEU 3 ? ? HD3 A LYS 7 ? ? 1.39 17 9 O A PHE 9 ? ? H A VAL 13 ? ? 1.54 18 10 O A PHE 9 ? ? H A VAL 13 ? ? 1.55 19 11 O A SER 27 ? ? H A CYS 31 ? ? 1.57 20 12 O A LEU 3 ? ? HD2 A LYS 7 ? ? 1.44 21 12 O A LEU 3 ? ? CD A LYS 7 ? ? 2.18 22 14 HD2 A LYS 32 ? ? HD3 A LYS 35 ? ? 1.01 23 14 CD A LYS 32 ? ? HD3 A LYS 35 ? ? 1.56 24 15 O A THR 28 ? ? HB2 A LYS 32 ? ? 1.57 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C A CYS 37 ? ? OXT A CYS 37 ? ? 1.364 1.229 0.135 0.019 N 2 2 C A CYS 37 ? ? OXT A CYS 37 ? ? 1.364 1.229 0.135 0.019 N 3 3 C A CYS 37 ? ? OXT A CYS 37 ? ? 1.364 1.229 0.135 0.019 N 4 4 C A CYS 37 ? ? OXT A CYS 37 ? ? 1.365 1.229 0.136 0.019 N 5 5 C A CYS 37 ? ? OXT A CYS 37 ? ? 1.365 1.229 0.136 0.019 N 6 6 C A CYS 37 ? ? OXT A CYS 37 ? ? 1.364 1.229 0.135 0.019 N 7 7 C A CYS 37 ? ? OXT A CYS 37 ? ? 1.365 1.229 0.136 0.019 N 8 8 C A CYS 37 ? ? OXT A CYS 37 ? ? 1.364 1.229 0.135 0.019 N 9 9 C A CYS 37 ? ? OXT A CYS 37 ? ? 1.364 1.229 0.135 0.019 N 10 10 C A CYS 37 ? ? OXT A CYS 37 ? ? 1.364 1.229 0.135 0.019 N 11 11 C A CYS 37 ? ? OXT A CYS 37 ? ? 1.364 1.229 0.135 0.019 N 12 12 C A CYS 37 ? ? OXT A CYS 37 ? ? 1.365 1.229 0.136 0.019 N 13 13 C A CYS 37 ? ? OXT A CYS 37 ? ? 1.365 1.229 0.136 0.019 N 14 14 C A CYS 37 ? ? OXT A CYS 37 ? ? 1.365 1.229 0.136 0.019 N 15 15 C A CYS 37 ? ? OXT A CYS 37 ? ? 1.365 1.229 0.136 0.019 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 11 ? ? -81.25 47.55 2 1 VAL A 13 ? ? -87.60 46.94 3 1 ALA A 22 ? ? -90.07 36.54 4 2 VAL A 13 ? ? -86.73 42.69 5 2 CYS A 31 ? ? -77.61 31.13 6 2 LEU A 33 ? ? -64.22 2.29 7 3 ILE A 2 ? ? -84.29 37.38 8 3 VAL A 13 ? ? -68.46 0.35 9 3 ALA A 22 ? ? -90.03 37.45 10 3 CYS A 31 ? ? -78.46 29.18 11 4 VAL A 13 ? ? -88.42 41.96 12 4 LYS A 35 ? ? 64.97 79.79 13 5 VAL A 13 ? ? -78.99 28.27 14 5 CYS A 31 ? ? -66.46 1.63 15 5 LYS A 32 ? ? -90.04 52.46 16 6 LYS A 11 ? ? -81.71 43.36 17 6 VAL A 13 ? ? -89.98 41.85 18 6 THR A 28 ? ? -82.49 36.26 19 6 CYS A 31 ? ? -78.91 39.14 20 6 LEU A 33 ? ? -29.89 71.45 21 6 LYS A 35 ? ? -144.31 -57.43 22 6 THR A 36 ? ? 56.49 16.89 23 7 LYS A 11 ? ? -83.72 44.33 24 7 VAL A 13 ? ? -68.34 4.27 25 7 ALA A 34 ? ? -152.09 0.19 26 8 VAL A 13 ? ? -90.01 45.29 27 8 CYS A 31 ? ? -59.36 -8.81 28 8 LYS A 32 ? ? -78.24 29.38 29 8 ALA A 34 ? ? -142.56 44.99 30 9 LYS A 11 ? ? -81.81 43.38 31 9 VAL A 13 ? ? -86.20 46.32 32 9 ALA A 22 ? ? -90.06 41.54 33 10 LYS A 11 ? ? -81.02 41.70 34 10 VAL A 13 ? ? -84.68 45.13 35 10 CYS A 31 ? ? -75.51 20.12 36 10 LYS A 35 ? ? -63.39 22.75 37 11 VAL A 13 ? ? -87.38 36.01 38 11 LYS A 32 ? ? -76.32 24.39 39 11 ALA A 34 ? ? -140.29 45.40 40 12 VAL A 13 ? ? -85.58 49.24 41 12 ALA A 22 ? ? -90.02 40.81 42 13 ILE A 2 ? ? -82.29 38.84 43 13 VAL A 13 ? ? -89.02 47.22 44 14 ILE A 2 ? ? -82.40 39.89 45 14 LYS A 11 ? ? -82.83 42.71 46 14 VAL A 13 ? ? -87.24 47.78 47 14 ALA A 34 ? ? -141.02 47.92 48 15 VAL A 13 ? ? -86.16 43.91 49 15 CYS A 31 ? ? -77.67 43.33 50 15 LEU A 33 ? ? -29.88 -75.00 51 15 LYS A 35 ? ? -141.76 -65.52 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 5 GLY A 12 ? ? VAL A 13 ? ? 143.84 2 6 THR A 28 ? ? VAL A 29 ? ? 148.20 3 7 GLY A 12 ? ? VAL A 13 ? ? 148.52 4 15 LYS A 32 ? ? LEU A 33 ? ? -148.07 #