HEADER PROTEIN BINDING 10-MAR-06 2GBK TITLE CRYSTAL STRUCTURE OF THE 9-10 MOAD INSERTION MUTANT OF UBIQUITIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PRS KEYWDS LOOP INSERTION, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR D.M.FERRARO,D.J.FERRARO,S.RAMASWAMY,A.D.ROBERTSON REVDAT 5 30-AUG-23 2GBK 1 SEQADV REVDAT 4 18-OCT-17 2GBK 1 REMARK REVDAT 3 13-JUL-11 2GBK 1 VERSN REVDAT 2 24-FEB-09 2GBK 1 VERSN REVDAT 1 16-MAY-06 2GBK 0 JRNL AUTH D.M.FERRARO,D.J.FERRARO,S.RAMASWAMY,A.D.ROBERTSON JRNL TITL STRUCTURES OF UBIQUITIN INSERTION MUTANTS SUPPORT JRNL TITL 2 SITE-SPECIFIC REFLEX RESPONSE TO INSERTIONS HYPOTHESIS. JRNL REF J.MOL.BIOL. V. 359 390 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16647719 JRNL DOI 10.1016/J.JMB.2006.03.047 REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 5.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.7 REMARK 3 NUMBER OF REFLECTIONS : 16331 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.246 REMARK 3 R VALUE (WORKING SET) : 0.244 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 850 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.99 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.04 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1014 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.71 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE SET COUNT : 57 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2597 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 254 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.95000 REMARK 3 B22 (A**2) : -1.48000 REMARK 3 B33 (A**2) : 0.59000 REMARK 3 B12 (A**2) : 1.32000 REMARK 3 B13 (A**2) : -1.08000 REMARK 3 B23 (A**2) : 0.29000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.428 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.258 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.191 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.853 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.918 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.884 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2621 ; 0.005 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1839 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3526 ; 0.857 ; 1.996 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4536 ; 0.743 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 323 ; 5.022 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 119 ;33.735 ;25.462 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 537 ;12.476 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;12.801 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 423 ; 0.050 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2816 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 451 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 494 ; 0.157 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2065 ; 0.163 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1251 ; 0.151 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1406 ; 0.075 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 202 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 21 ; 0.118 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 53 ; 0.152 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 30 ; 0.139 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2127 ; 0.233 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 662 ; 0.034 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2640 ; 0.263 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1097 ; 0.479 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 886 ; 0.733 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 80 5 REMARK 3 1 B 1 B 80 5 REMARK 3 1 C 1 C 80 5 REMARK 3 1 D 1 D 80 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 471 ; 0.150 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 B (A): 471 ; 0.160 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 C (A): 471 ; 0.160 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 D (A): 471 ; 0.150 ; 0.500 REMARK 3 LOOSE POSITIONAL 1 A (A): 613 ; 0.880 ; 5.000 REMARK 3 LOOSE POSITIONAL 1 B (A): 613 ; 0.910 ; 5.000 REMARK 3 LOOSE POSITIONAL 1 C (A): 613 ; 0.760 ; 5.000 REMARK 3 LOOSE POSITIONAL 1 D (A): 613 ; 0.940 ; 5.000 REMARK 3 MEDIUM THERMAL 1 A (A**2): 471 ; 0.110 ; 2.000 REMARK 3 MEDIUM THERMAL 1 B (A**2): 471 ; 0.100 ; 2.000 REMARK 3 MEDIUM THERMAL 1 C (A**2): 471 ; 0.150 ; 2.000 REMARK 3 MEDIUM THERMAL 1 D (A**2): 471 ; 0.150 ; 2.000 REMARK 3 LOOSE THERMAL 1 A (A**2): 613 ; 0.310 ;10.000 REMARK 3 LOOSE THERMAL 1 B (A**2): 613 ; 0.300 ;10.000 REMARK 3 LOOSE THERMAL 1 C (A**2): 613 ; 0.320 ;10.000 REMARK 3 LOOSE THERMAL 1 D (A**2): 613 ; 0.310 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 82 REMARK 3 ORIGIN FOR THE GROUP (A): 2.4820 -6.2890 -2.3590 REMARK 3 T TENSOR REMARK 3 T11: -0.0804 T22: 0.0128 REMARK 3 T33: -0.0827 T12: -0.0343 REMARK 3 T13: 0.0444 T23: -0.0213 REMARK 3 L TENSOR REMARK 3 L11: 1.7643 L22: 2.2366 REMARK 3 L33: 4.5642 L12: 0.1171 REMARK 3 L13: 1.1041 L23: 0.2767 REMARK 3 S TENSOR REMARK 3 S11: 0.0359 S12: -0.1612 S13: 0.0232 REMARK 3 S21: 0.2283 S22: -0.0439 S23: -0.0741 REMARK 3 S31: 0.0413 S32: -0.0680 S33: 0.0080 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 82 REMARK 3 ORIGIN FOR THE GROUP (A): -15.6460 -27.9490 -1.8540 REMARK 3 T TENSOR REMARK 3 T11: -0.0580 T22: -0.0014 REMARK 3 T33: -0.0824 T12: -0.0382 REMARK 3 T13: 0.0368 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 2.4903 L22: 1.8816 REMARK 3 L33: 4.9073 L12: 0.0379 REMARK 3 L13: 1.8648 L23: 0.7391 REMARK 3 S TENSOR REMARK 3 S11: 0.0153 S12: -0.0779 S13: 0.0901 REMARK 3 S21: 0.0873 S22: 0.0018 S23: -0.0861 REMARK 3 S31: 0.1444 S32: -0.0509 S33: -0.0172 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 83 REMARK 3 ORIGIN FOR THE GROUP (A): -1.0100 -7.3200 -24.5370 REMARK 3 T TENSOR REMARK 3 T11: -0.0794 T22: 0.0116 REMARK 3 T33: -0.0933 T12: -0.0395 REMARK 3 T13: 0.0357 T23: -0.0136 REMARK 3 L TENSOR REMARK 3 L11: 3.4248 L22: 2.2600 REMARK 3 L33: 3.4093 L12: 0.2024 REMARK 3 L13: 1.7638 L23: 0.8493 REMARK 3 S TENSOR REMARK 3 S11: -0.0241 S12: 0.2182 S13: -0.1466 REMARK 3 S21: -0.0295 S22: 0.0322 S23: 0.0563 REMARK 3 S31: 0.1741 S32: 0.1818 S33: -0.0080 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 80 REMARK 3 ORIGIN FOR THE GROUP (A): -17.9660 -30.1290 -24.5280 REMARK 3 T TENSOR REMARK 3 T11: -0.0681 T22: -0.0088 REMARK 3 T33: -0.0680 T12: -0.0475 REMARK 3 T13: 0.0313 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 2.2471 L22: 3.0833 REMARK 3 L33: 6.4728 L12: -0.3028 REMARK 3 L13: 1.9654 L23: 1.1744 REMARK 3 S TENSOR REMARK 3 S11: -0.0946 S12: 0.1964 S13: 0.1839 REMARK 3 S21: -0.1387 S22: 0.0000 S23: -0.0396 REMARK 3 S31: -0.2806 S32: -0.0047 S33: 0.0946 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2GBK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAR-06. REMARK 100 THE DEPOSITION ID IS D_1000036923. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUL-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : CRYOGENICALLY-COOLED SI(111) REMARK 200 DOUBLE-CRYSTAL SYSTEM REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : JDIRECTOR REMARK 200 DATA SCALING SOFTWARE : D*TREK 9.4L REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16333 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 5.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.7 REMARK 200 DATA REDUNDANCY : 2.730 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.66 REMARK 200 R MERGE FOR SHELL (I) : 0.15700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2GBJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 27-32% PEG 6000, 4-12% ACETONE, 50 MM REMARK 280 SODIUM CACODYLATE, PH 5.9, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE MONOMER IS BELIEVED TO BE THE ACTIVE BIOLOGICAL REMARK 300 ASSEMBLY. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 2630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 2360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 83 REMARK 465 GLY B 83 REMARK 465 ARG D 81 REMARK 465 GLY D 82 REMARK 465 GLY D 83 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2GBJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE 9-10 8 GLYCINE INSERTION MUTANT OF REMARK 900 UBIQUITIN REMARK 900 RELATED ID: 2GBM RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE 35-36 8 GLYCINE INSERTION MUTANT OF THE REMARK 900 SAME PROTEIN REMARK 900 RELATED ID: 2GBN RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE 35-36 8 GLYCINE INSERTION MUTANT OF THE REMARK 900 SAME PROTEIN REMARK 900 RELATED ID: 2GBR RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE 35-36 MOAD INSERTION MUTANT OF THE SAME REMARK 900 PROTEIN DBREF 2GBK A 1 83 UNP P62988 UBIQ_HUMAN 1 76 DBREF 2GBK B 1 83 UNP P62988 UBIQ_HUMAN 1 76 DBREF 2GBK C 1 83 UNP P62988 UBIQ_HUMAN 1 76 DBREF 2GBK D 1 83 UNP P62988 UBIQ_HUMAN 1 76 SEQADV 2GBK GLN A 10 UNP P62988 INSERTION SEQADV 2GBK VAL A 11 UNP P62988 INSERTION SEQADV 2GBK ARG A 12 UNP P62988 INSERTION SEQADV 2GBK GLU A 13 UNP P62988 INSERTION SEQADV 2GBK LEU A 14 UNP P62988 INSERTION SEQADV 2GBK VAL A 15 UNP P62988 INSERTION SEQADV 2GBK GLY A 16 UNP P62988 INSERTION SEQADV 2GBK GLN B 10 UNP P62988 INSERTION SEQADV 2GBK VAL B 11 UNP P62988 INSERTION SEQADV 2GBK ARG B 12 UNP P62988 INSERTION SEQADV 2GBK GLU B 13 UNP P62988 INSERTION SEQADV 2GBK LEU B 14 UNP P62988 INSERTION SEQADV 2GBK VAL B 15 UNP P62988 INSERTION SEQADV 2GBK GLY B 16 UNP P62988 INSERTION SEQADV 2GBK GLN C 10 UNP P62988 INSERTION SEQADV 2GBK VAL C 11 UNP P62988 INSERTION SEQADV 2GBK ARG C 12 UNP P62988 INSERTION SEQADV 2GBK GLU C 13 UNP P62988 INSERTION SEQADV 2GBK LEU C 14 UNP P62988 INSERTION SEQADV 2GBK VAL C 15 UNP P62988 INSERTION SEQADV 2GBK GLY C 16 UNP P62988 INSERTION SEQADV 2GBK GLN D 10 UNP P62988 INSERTION SEQADV 2GBK VAL D 11 UNP P62988 INSERTION SEQADV 2GBK ARG D 12 UNP P62988 INSERTION SEQADV 2GBK GLU D 13 UNP P62988 INSERTION SEQADV 2GBK LEU D 14 UNP P62988 INSERTION SEQADV 2GBK VAL D 15 UNP P62988 INSERTION SEQADV 2GBK GLY D 16 UNP P62988 INSERTION SEQRES 1 A 83 MET GLN ILE PHE VAL LYS THR LEU THR GLN VAL ARG GLU SEQRES 2 A 83 LEU VAL GLY GLY LYS THR ILE THR LEU GLU VAL GLU PRO SEQRES 3 A 83 SER ASP THR ILE GLU ASN VAL LYS ALA LYS ILE GLN ASP SEQRES 4 A 83 LYS GLU GLY ILE PRO PRO ASP GLN GLN ARG LEU ILE PHE SEQRES 5 A 83 ALA GLY LYS GLN LEU GLU ASP GLY ARG THR LEU SER ASP SEQRES 6 A 83 TYR ASN ILE GLN LYS GLU SER THR LEU HIS LEU VAL LEU SEQRES 7 A 83 ARG LEU ARG GLY GLY SEQRES 1 B 83 MET GLN ILE PHE VAL LYS THR LEU THR GLN VAL ARG GLU SEQRES 2 B 83 LEU VAL GLY GLY LYS THR ILE THR LEU GLU VAL GLU PRO SEQRES 3 B 83 SER ASP THR ILE GLU ASN VAL LYS ALA LYS ILE GLN ASP SEQRES 4 B 83 LYS GLU GLY ILE PRO PRO ASP GLN GLN ARG LEU ILE PHE SEQRES 5 B 83 ALA GLY LYS GLN LEU GLU ASP GLY ARG THR LEU SER ASP SEQRES 6 B 83 TYR ASN ILE GLN LYS GLU SER THR LEU HIS LEU VAL LEU SEQRES 7 B 83 ARG LEU ARG GLY GLY SEQRES 1 C 83 MET GLN ILE PHE VAL LYS THR LEU THR GLN VAL ARG GLU SEQRES 2 C 83 LEU VAL GLY GLY LYS THR ILE THR LEU GLU VAL GLU PRO SEQRES 3 C 83 SER ASP THR ILE GLU ASN VAL LYS ALA LYS ILE GLN ASP SEQRES 4 C 83 LYS GLU GLY ILE PRO PRO ASP GLN GLN ARG LEU ILE PHE SEQRES 5 C 83 ALA GLY LYS GLN LEU GLU ASP GLY ARG THR LEU SER ASP SEQRES 6 C 83 TYR ASN ILE GLN LYS GLU SER THR LEU HIS LEU VAL LEU SEQRES 7 C 83 ARG LEU ARG GLY GLY SEQRES 1 D 83 MET GLN ILE PHE VAL LYS THR LEU THR GLN VAL ARG GLU SEQRES 2 D 83 LEU VAL GLY GLY LYS THR ILE THR LEU GLU VAL GLU PRO SEQRES 3 D 83 SER ASP THR ILE GLU ASN VAL LYS ALA LYS ILE GLN ASP SEQRES 4 D 83 LYS GLU GLY ILE PRO PRO ASP GLN GLN ARG LEU ILE PHE SEQRES 5 D 83 ALA GLY LYS GLN LEU GLU ASP GLY ARG THR LEU SER ASP SEQRES 6 D 83 TYR ASN ILE GLN LYS GLU SER THR LEU HIS LEU VAL LEU SEQRES 7 D 83 ARG LEU ARG GLY GLY FORMUL 5 HOH *254(H2 O) HELIX 1 1 LEU A 8 GLY A 16 1 9 HELIX 2 2 THR A 29 GLY A 42 1 14 HELIX 3 3 PRO A 44 ASP A 46 5 3 HELIX 4 4 LEU A 63 ASN A 67 5 5 HELIX 5 5 LEU B 8 GLY B 16 1 9 HELIX 6 6 THR B 29 GLY B 42 1 14 HELIX 7 7 PRO B 44 ASP B 46 5 3 HELIX 8 8 LEU B 63 ASN B 67 5 5 HELIX 9 9 LEU C 8 GLY C 16 1 9 HELIX 10 10 THR C 29 GLY C 42 1 14 HELIX 11 11 PRO C 44 ASP C 46 5 3 HELIX 12 12 LEU C 63 ASN C 67 5 5 HELIX 13 13 LEU D 8 GLY D 16 1 9 HELIX 14 14 THR D 29 GLY D 42 1 14 HELIX 15 15 PRO D 44 ASP D 46 5 3 HELIX 16 16 THR D 62 ASN D 67 5 6 SHEET 1 A 5 ILE A 20 GLU A 23 0 SHEET 2 A 5 GLN A 2 LYS A 6 -1 N VAL A 5 O ILE A 20 SHEET 3 A 5 THR A 73 LEU A 78 1 O LEU A 74 N PHE A 4 SHEET 4 A 5 GLN A 48 PHE A 52 -1 N ILE A 51 O HIS A 75 SHEET 5 A 5 LYS A 55 GLN A 56 -1 O LYS A 55 N PHE A 52 SHEET 1 B 5 ILE B 20 GLU B 23 0 SHEET 2 B 5 GLN B 2 LYS B 6 -1 N ILE B 3 O LEU B 22 SHEET 3 B 5 THR B 73 LEU B 78 1 O LEU B 74 N PHE B 4 SHEET 4 B 5 GLN B 48 PHE B 52 -1 N ILE B 51 O HIS B 75 SHEET 5 B 5 LYS B 55 GLN B 56 -1 O LYS B 55 N PHE B 52 SHEET 1 C 5 ILE C 20 GLU C 23 0 SHEET 2 C 5 GLN C 2 LYS C 6 -1 N ILE C 3 O LEU C 22 SHEET 3 C 5 THR C 73 LEU C 78 1 O LEU C 74 N PHE C 4 SHEET 4 C 5 GLN C 48 PHE C 52 -1 N ILE C 51 O HIS C 75 SHEET 5 C 5 LYS C 55 GLN C 56 -1 O LYS C 55 N PHE C 52 SHEET 1 D 5 ILE D 20 GLU D 23 0 SHEET 2 D 5 GLN D 2 LYS D 6 -1 N ILE D 3 O LEU D 22 SHEET 3 D 5 THR D 73 LEU D 78 1 O LEU D 76 N LYS D 6 SHEET 4 D 5 GLN D 48 PHE D 52 -1 N ILE D 51 O HIS D 75 SHEET 5 D 5 LYS D 55 GLN D 56 -1 O LYS D 55 N PHE D 52 CRYST1 30.046 45.895 54.382 79.91 74.99 81.33 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.033280 -0.005080 -0.008290 0.00000 SCALE2 0.000000 0.022040 -0.003170 0.00000 SCALE3 0.000000 0.000000 0.019230 0.00000