HEADER ISOMERASE 13-MAR-06 2GC2 TITLE THE CRYSTAL STRUCTURE OF PHOSPHOGLUCOSE ISOMERASE FROM PYROCOCCUS TITLE 2 FURIOSUS IN COMPLEX WITH FRUCTOSE 6-PHOSPHATE AND ZINC COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSE-6-PHOSPHATE ISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GPI, PHOSPHOGLUCOSE ISOMERASE, PGI, PHOSPHOHEXOSE ISOMERASE, COMPND 5 PHI; COMPND 6 EC: 5.3.1.9; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 3 ORGANISM_TAXID: 2261; SOURCE 4 GENE: PGIA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PLUW557 KEYWDS CUPIN, PHOSPHOGLUCOSE ISOMERASE, FRUCTOSE 6-PHOSPHATE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.M.BERRISFORD,D.W.RICE,P.J.BAKER REVDAT 6 30-AUG-23 2GC2 1 REMARK SEQADV LINK REVDAT 5 11-APR-12 2GC2 1 REVDAT REVDAT 4 21-MAR-12 2GC2 1 HET VERSN CONECT HETNAM REVDAT 4 2 1 FORMUL REMARK SITE REVDAT 3 24-FEB-09 2GC2 1 VERSN REVDAT 2 09-MAY-06 2GC2 1 JRNL REVDAT 1 11-APR-06 2GC2 0 JRNL AUTH J.M.BERRISFORD,A.M.HOUNSLOW,J.AKERBOOM,W.R.HAGEN,S.J.BROUNS, JRNL AUTH 2 J.VAN DER OOST,I.A.MURRAY,G.MICHAEL BLACKBURN,J.P.WALTHO, JRNL AUTH 3 D.W.RICE,P.J.BAKER JRNL TITL EVIDENCE SUPPORTING A CIS-ENEDIOL-BASED MECHANISM FOR JRNL TITL 2 PYROCOCCUS FURIOSUS PHOSPHOGLUCOSE ISOMERASE JRNL REF J.MOL.BIOL. V. 358 1353 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16580686 JRNL DOI 10.1016/J.JMB.2006.03.015 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 23145 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1187 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1579 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.76 REMARK 3 BIN R VALUE (WORKING SET) : 0.1980 REMARK 3 BIN FREE R VALUE SET COUNT : 80 REMARK 3 BIN FREE R VALUE : 0.3130 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3020 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 304 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.231 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.205 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.144 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.320 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3138 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4248 ; 1.761 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 374 ; 7.229 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 148 ;34.686 ;24.459 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 524 ;17.391 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;21.214 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 444 ; 0.120 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2390 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1384 ; 0.202 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2034 ; 0.310 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 285 ; 0.169 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 43 ; 0.227 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.258 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1932 ; 1.171 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3004 ; 1.816 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1424 ; 2.841 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1244 ; 4.356 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2GC2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-MAR-06. REMARK 100 THE DEPOSITION ID IS D_1000036939. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-MAR-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23192 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 52.445 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : 0.08900 REMARK 200 FOR THE DATA SET : 8.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.44000 REMARK 200 R SYM FOR SHELL (I) : 0.44000 REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1X8E REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M AMMONIUM SULPHATE, 0.1 M SODIUM REMARK 280 ACETATE TRIHYDRATE PH 4.6 AND 20% PEG MONOETHYL ETHER 2000, 5MM REMARK 280 ZNCL2, 50MM FRUCTOSE 6-PHOSPHATE , VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.03350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.19600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.97250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.19600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.03350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.97250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -118.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O1 F6R A 501 O HOH A 632 2.10 REMARK 500 NZ LYS B 41 O HOH B 608 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 616 O HOH A 626 2555 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 26 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 48 66.97 36.01 REMARK 500 TYR A 133 -2.60 77.78 REMARK 500 ARG A 186 32.01 -84.05 REMARK 500 GLU B 47 -41.68 -152.71 REMARK 500 PRO B 113 -19.38 -49.45 REMARK 500 PRO B 185 43.59 -74.51 REMARK 500 ARG B 186 8.48 -161.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 88 NE2 REMARK 620 2 HIS A 90 NE2 108.1 REMARK 620 3 GLU A 97 OE2 162.9 86.5 REMARK 620 4 HIS A 136 NE2 94.2 91.0 76.2 REMARK 620 5 F6R A 501 O1 92.4 101.7 93.3 163.1 REMARK 620 6 F6R A 501 O2 85.1 165.8 81.4 93.4 71.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 88 NE2 REMARK 620 2 HIS B 90 NE2 119.9 REMARK 620 3 GLU B 97 OE2 153.6 86.5 REMARK 620 4 HIS B 136 NE2 92.0 99.7 80.9 REMARK 620 5 F6R B 502 O1 91.9 105.7 81.7 148.1 REMARK 620 6 F6R B 502 O2 74.7 163.8 79.4 85.9 64.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE F6R A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE F6R B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1X7N RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF PYROCOCCUS FURIOSUS PHOSPHOGLUCOSE REMARK 900 ISOMERASE WITH BOUND 5-PHOSPHO-D-ARABINONATE AND MANGANESE REMARK 900 RELATED ID: 1X8E RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PYROCOCCUS FURIOSUS PHOSPHOGLUCOSE ISOMERASE REMARK 900 FREE ENZYME REMARK 900 RELATED ID: 1X82 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PHOSPHOGLUCOSE ISOMERASE FROM PYROCOCCUS REMARK 900 FURIOSUS WITH BOUND 5-PHOSPHO-D-ARABINONATE REMARK 900 RELATED ID: 2GC0 RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF PHOSPHOGLUCOSE ISOMERASE FROM PYROCOCCUS REMARK 900 FURIOSUS IN COMPLEX WITH 5-PHOSPHO-D-ARABINONOHYDROXAMATE AND ZINC REMARK 900 RELATED ID: 2GC1 RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF PHOSPHOGLUCOSE ISOMERASE FROM PYROCOCCUS REMARK 900 FURIOSUS IN COMPLEX WITH SORBITOL 6-PHOSPHATE AND ZINC REMARK 900 RELATED ID: 2GC3 RELATED DB: PDB DBREF 2GC2 A 1 187 UNP P83194 G6PI_PYRFU 1 187 DBREF 2GC2 B 1 187 UNP P83194 G6PI_PYRFU 1 187 SEQADV 2GC2 MET A 0 UNP P83194 CLONING ARTIFACT SEQADV 2GC2 MET B 0 UNP P83194 CLONING ARTIFACT SEQRES 1 A 188 MET MET TYR LYS GLU PRO PHE GLY VAL LYS VAL ASP PHE SEQRES 2 A 188 GLU THR GLY ILE ILE GLU GLY ALA LYS LYS SER VAL ARG SEQRES 3 A 188 ARG LEU SER ASP MET GLU GLY TYR PHE VAL ASP GLU ARG SEQRES 4 A 188 ALA TRP LYS GLU LEU VAL GLU LYS GLU ASP PRO VAL VAL SEQRES 5 A 188 TYR GLU VAL TYR ALA VAL GLU GLN GLU GLU LYS GLU GLY SEQRES 6 A 188 ASP LEU ASN PHE ALA THR THR VAL LEU TYR PRO GLY LYS SEQRES 7 A 188 VAL GLY LYS GLU PHE PHE PHE THR LYS GLY HIS PHE HIS SEQRES 8 A 188 ALA LYS LEU ASP ARG ALA GLU VAL TYR VAL ALA LEU LYS SEQRES 9 A 188 GLY LYS GLY GLY MET LEU LEU GLN THR PRO GLU GLY ASP SEQRES 10 A 188 ALA LYS TRP ILE SER MET GLU PRO GLY THR VAL VAL TYR SEQRES 11 A 188 VAL PRO PRO TYR TRP ALA HIS ARG THR VAL ASN ILE GLY SEQRES 12 A 188 ASP GLU PRO PHE ILE PHE LEU ALA ILE TYR PRO ALA ASP SEQRES 13 A 188 ALA GLY HIS ASP TYR GLY THR ILE ALA GLU LYS GLY PHE SEQRES 14 A 188 SER LYS ILE VAL ILE GLU GLU ASN GLY GLU VAL LYS VAL SEQRES 15 A 188 VAL ASP ASN PRO ARG TRP SEQRES 1 B 188 MET MET TYR LYS GLU PRO PHE GLY VAL LYS VAL ASP PHE SEQRES 2 B 188 GLU THR GLY ILE ILE GLU GLY ALA LYS LYS SER VAL ARG SEQRES 3 B 188 ARG LEU SER ASP MET GLU GLY TYR PHE VAL ASP GLU ARG SEQRES 4 B 188 ALA TRP LYS GLU LEU VAL GLU LYS GLU ASP PRO VAL VAL SEQRES 5 B 188 TYR GLU VAL TYR ALA VAL GLU GLN GLU GLU LYS GLU GLY SEQRES 6 B 188 ASP LEU ASN PHE ALA THR THR VAL LEU TYR PRO GLY LYS SEQRES 7 B 188 VAL GLY LYS GLU PHE PHE PHE THR LYS GLY HIS PHE HIS SEQRES 8 B 188 ALA LYS LEU ASP ARG ALA GLU VAL TYR VAL ALA LEU LYS SEQRES 9 B 188 GLY LYS GLY GLY MET LEU LEU GLN THR PRO GLU GLY ASP SEQRES 10 B 188 ALA LYS TRP ILE SER MET GLU PRO GLY THR VAL VAL TYR SEQRES 11 B 188 VAL PRO PRO TYR TRP ALA HIS ARG THR VAL ASN ILE GLY SEQRES 12 B 188 ASP GLU PRO PHE ILE PHE LEU ALA ILE TYR PRO ALA ASP SEQRES 13 B 188 ALA GLY HIS ASP TYR GLY THR ILE ALA GLU LYS GLY PHE SEQRES 14 B 188 SER LYS ILE VAL ILE GLU GLU ASN GLY GLU VAL LYS VAL SEQRES 15 B 188 VAL ASP ASN PRO ARG TRP HET ZN A 401 1 HET F6R A 501 18 HET ZN B 402 1 HET F6R B 502 18 HETNAM ZN ZINC ION HETNAM F6R FRUCTOSE -6-PHOSPHATE FORMUL 3 ZN 2(ZN 2+) FORMUL 4 F6R 2(C6 H13 O9 P) FORMUL 7 HOH *304(H2 O) HELIX 1 1 SER A 28 GLU A 31 5 4 HELIX 2 2 ASP A 36 GLU A 47 1 12 HELIX 3 3 TYR A 160 GLY A 167 1 8 HELIX 4 4 SER B 28 GLU B 31 5 4 HELIX 5 5 ASP B 36 GLU B 47 1 12 HELIX 6 6 TYR B 160 GLY B 167 1 8 SHEET 1 A 7 PHE A 6 LYS A 9 0 SHEET 2 A 7 THR B 126 VAL B 130 -1 O VAL B 127 N VAL A 8 SHEET 3 A 7 GLU B 97 LYS B 103 -1 N GLU B 97 O VAL B 130 SHEET 4 A 7 PHE B 146 PRO B 153 -1 O LEU B 149 N VAL B 100 SHEET 5 A 7 LEU B 66 LEU B 73 -1 N LEU B 73 O PHE B 146 SHEET 6 A 7 VAL B 50 VAL B 57 -1 N VAL B 57 O PHE B 68 SHEET 7 A 7 LYS B 21 ARG B 26 -1 N SER B 23 O VAL B 54 SHEET 1 B 7 LYS A 21 ARG A 26 0 SHEET 2 B 7 VAL A 50 VAL A 57 -1 O VAL A 51 N ARG A 25 SHEET 3 B 7 LEU A 66 LEU A 73 -1 O PHE A 68 N VAL A 57 SHEET 4 B 7 PHE A 146 PRO A 153 -1 O ALA A 150 N ALA A 69 SHEET 5 B 7 GLU A 97 LYS A 103 -1 N LEU A 102 O ILE A 147 SHEET 6 B 7 THR A 126 VAL A 130 -1 O VAL A 130 N GLU A 97 SHEET 7 B 7 PHE B 6 LYS B 9 -1 O VAL B 8 N VAL A 127 SHEET 1 C 2 LYS A 77 VAL A 78 0 SHEET 2 C 2 GLU A 81 PHE A 82 -1 O GLU A 81 N VAL A 78 SHEET 1 D 3 ALA A 117 MET A 122 0 SHEET 2 D 3 GLY A 106 GLN A 111 -1 N GLY A 106 O MET A 122 SHEET 3 D 3 ALA A 135 ASN A 140 -1 O VAL A 139 N GLY A 107 SHEET 1 E 2 LYS A 170 GLU A 175 0 SHEET 2 E 2 GLU A 178 ASP A 183 -1 O VAL A 182 N ILE A 171 SHEET 1 F 2 LYS B 77 VAL B 78 0 SHEET 2 F 2 GLU B 81 PHE B 82 -1 O GLU B 81 N VAL B 78 SHEET 1 G 3 ALA B 117 MET B 122 0 SHEET 2 G 3 GLY B 106 GLN B 111 -1 N GLY B 106 O MET B 122 SHEET 3 G 3 ALA B 135 ASN B 140 -1 O ARG B 137 N LEU B 109 SHEET 1 H 2 LYS B 170 GLU B 175 0 SHEET 2 H 2 GLU B 178 ASP B 183 -1 O VAL B 182 N ILE B 171 LINK NE2 HIS A 88 ZN ZN A 401 1555 1555 2.23 LINK NE2 HIS A 90 ZN ZN A 401 1555 1555 2.26 LINK OE2 GLU A 97 ZN ZN A 401 1555 1555 2.09 LINK NE2 HIS A 136 ZN ZN A 401 1555 1555 2.15 LINK ZN ZN A 401 O1 BF6R A 501 1555 1555 2.26 LINK ZN ZN A 401 O2 F6R A 501 1555 1555 2.57 LINK NE2 HIS B 88 ZN ZN B 402 1555 1555 2.45 LINK NE2 HIS B 90 ZN ZN B 402 1555 1555 2.25 LINK OE2 GLU B 97 ZN ZN B 402 1555 1555 2.26 LINK NE2 HIS B 136 ZN ZN B 402 1555 1555 2.29 LINK ZN ZN B 402 O1 BF6R B 502 1555 1555 2.32 LINK ZN ZN B 402 O2 F6R B 502 1555 1555 2.67 SITE 1 AC1 5 HIS A 88 HIS A 90 GLU A 97 HIS A 136 SITE 2 AC1 5 F6R A 501 SITE 1 AC2 5 HIS B 88 HIS B 90 GLU B 97 HIS B 136 SITE 2 AC2 5 F6R B 502 SITE 1 AC3 19 TYR A 52 THR A 71 THR A 85 GLY A 87 SITE 2 AC3 19 HIS A 88 HIS A 90 GLU A 97 TYR A 99 SITE 3 AC3 19 HIS A 136 TYR A 152 HIS A 158 TYR A 160 SITE 4 AC3 19 ZN A 401 HOH A 510 HOH A 522 HOH A 558 SITE 5 AC3 19 HOH A 561 HOH A 606 HOH A 632 SITE 1 AC4 20 TYR B 52 THR B 71 THR B 85 GLY B 87 SITE 2 AC4 20 HIS B 88 HIS B 90 GLU B 97 TYR B 99 SITE 3 AC4 20 HIS B 136 PHE B 148 TYR B 152 HIS B 158 SITE 4 AC4 20 TYR B 160 ZN B 402 HOH B 584 HOH B 610 SITE 5 AC4 20 HOH B 627 HOH B 628 HOH B 632 HOH B 633 CRYST1 70.067 73.945 74.392 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014270 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013520 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013440 0.00000