HEADER SIGNALING PROTEIN 14-MAR-06 2GCN TITLE CRYSTAL STRUCTURE OF THE HUMAN RHOC-GDP COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: RHO-RELATED GTP-BINDING PROTEIN RHOC; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: H9; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RHOC, ARH9, ARHC; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) RP; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS GTP-BINDING PROTEIN, GTPASE, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.M.G.DIAS,R.A.CERIONE REVDAT 5 30-AUG-23 2GCN 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 2GCN 1 VERSN REVDAT 3 24-FEB-09 2GCN 1 VERSN REVDAT 2 12-JUN-07 2GCN 1 JRNL REVDAT 1 27-MAR-07 2GCN 0 JRNL AUTH S.M.G.DIAS,R.A.CERIONE JRNL TITL X-RAY CRYSTAL STRUCTURES REVEAL TWO ACTIVATED STATES FOR JRNL TITL 2 RHOC. JRNL REF BIOCHEMISTRY V. 46 6547 2007 JRNL REFN ISSN 0006-2960 JRNL PMID 17497936 JRNL DOI 10.1021/BI700035P REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : 6.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 17765 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 905 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1042 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.43 REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE SET COUNT : 61 REMARK 3 BIN FREE R VALUE : 0.3720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1409 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 217 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.26000 REMARK 3 B22 (A**2) : 0.15000 REMARK 3 B33 (A**2) : 0.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.136 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.135 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.080 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.652 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1498 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2027 ; 1.604 ; 2.009 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 182 ;10.009 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 70 ;36.253 ;24.571 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 265 ;14.999 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;20.288 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 222 ; 0.111 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1120 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 813 ; 0.219 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 993 ; 0.308 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 184 ; 0.173 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 58 ; 0.240 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 24 ; 0.166 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 928 ; 0.792 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1456 ; 1.266 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 659 ; 1.967 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 568 ; 2.948 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 179 REMARK 3 ORIGIN FOR THE GROUP (A): -9.7685 3.4547 -1.9703 REMARK 3 T TENSOR REMARK 3 T11: -0.0172 T22: -0.0131 REMARK 3 T33: -0.0100 T12: 0.0011 REMARK 3 T13: -0.0049 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.5391 L22: 0.2615 REMARK 3 L33: 0.2235 L12: 0.0166 REMARK 3 L13: -0.1771 L23: -0.0448 REMARK 3 S TENSOR REMARK 3 S11: 0.0052 S12: -0.0116 S13: -0.0955 REMARK 3 S21: 0.0096 S22: -0.0009 S23: 0.0062 REMARK 3 S31: -0.0359 S32: -0.0036 S33: -0.0043 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2GCN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAR-06. REMARK 100 THE DEPOSITION ID IS D_1000036958. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-SEP-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR (MSC/RIGAKU) REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17803 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 46.575 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 6.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : 0.05000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.14800 REMARK 200 R SYM FOR SHELL (I) : 0.14800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1Z2C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.1M BIS TRIS, PH 6.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.10700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.91700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.30850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.91700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.10700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.30850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLN A 180 REMARK 465 VAL A 181 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 3117 O HOH A 3125 1.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A 33 N - CA - C ANGL. DEV. = -19.4 DEGREES REMARK 500 ARG A 122 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 122 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 33 -51.43 -124.61 REMARK 500 GLU A 64 -60.73 97.31 REMARK 500 LYS A 98 -53.69 -122.47 REMARK 500 ASN A 109 -2.01 78.82 REMARK 500 LYS A 164 -0.97 71.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 32 VAL A 33 -115.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A2001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 19 OG1 REMARK 620 2 THR A 37 O 88.6 REMARK 620 3 GDP A1001 O1B 92.7 175.4 REMARK 620 4 HOH A3143 O 91.7 87.6 88.0 REMARK 620 5 HOH A3144 O 172.6 85.7 93.4 92.8 REMARK 620 6 HOH A3145 O 84.3 91.6 92.9 175.9 91.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 3001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 3002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 3003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 3004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 3005 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2GCO RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE HUMAN RHOC-GPPNHP COMPLEX REMARK 900 RELATED ID: 2GCP RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE HUMAN RHOC-GSP COMPLEX DBREF 2GCN A 1 181 UNP P08134 RHOC_HUMAN 1 181 SEQADV 2GCN MET A -19 UNP P08134 CLONING ARTIFACT SEQADV 2GCN GLY A -18 UNP P08134 CLONING ARTIFACT SEQADV 2GCN SER A -17 UNP P08134 CLONING ARTIFACT SEQADV 2GCN SER A -16 UNP P08134 CLONING ARTIFACT SEQADV 2GCN HIS A -15 UNP P08134 EXPRESSION TAG SEQADV 2GCN HIS A -14 UNP P08134 EXPRESSION TAG SEQADV 2GCN HIS A -13 UNP P08134 EXPRESSION TAG SEQADV 2GCN HIS A -12 UNP P08134 EXPRESSION TAG SEQADV 2GCN HIS A -11 UNP P08134 EXPRESSION TAG SEQADV 2GCN HIS A -10 UNP P08134 EXPRESSION TAG SEQADV 2GCN SER A -9 UNP P08134 CLONING ARTIFACT SEQADV 2GCN SER A -8 UNP P08134 CLONING ARTIFACT SEQADV 2GCN GLY A -7 UNP P08134 CLONING ARTIFACT SEQADV 2GCN LEU A -6 UNP P08134 CLONING ARTIFACT SEQADV 2GCN VAL A -5 UNP P08134 CLONING ARTIFACT SEQADV 2GCN PRO A -4 UNP P08134 CLONING ARTIFACT SEQADV 2GCN ARG A -3 UNP P08134 CLONING ARTIFACT SEQADV 2GCN GLY A -2 UNP P08134 CLONING ARTIFACT SEQADV 2GCN SER A -1 UNP P08134 CLONING ARTIFACT SEQADV 2GCN HIS A 0 UNP P08134 CLONING ARTIFACT SEQRES 1 A 201 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 201 LEU VAL PRO ARG GLY SER HIS MET ALA ALA ILE ARG LYS SEQRES 3 A 201 LYS LEU VAL ILE VAL GLY ASP GLY ALA CYS GLY LYS THR SEQRES 4 A 201 CYS LEU LEU ILE VAL PHE SER LYS ASP GLN PHE PRO GLU SEQRES 5 A 201 VAL TYR VAL PRO THR VAL PHE GLU ASN TYR ILE ALA ASP SEQRES 6 A 201 ILE GLU VAL ASP GLY LYS GLN VAL GLU LEU ALA LEU TRP SEQRES 7 A 201 ASP THR ALA GLY GLN GLU ASP TYR ASP ARG LEU ARG PRO SEQRES 8 A 201 LEU SER TYR PRO ASP THR ASP VAL ILE LEU MET CYS PHE SEQRES 9 A 201 SER ILE ASP SER PRO ASP SER LEU GLU ASN ILE PRO GLU SEQRES 10 A 201 LYS TRP THR PRO GLU VAL LYS HIS PHE CYS PRO ASN VAL SEQRES 11 A 201 PRO ILE ILE LEU VAL GLY ASN LYS LYS ASP LEU ARG GLN SEQRES 12 A 201 ASP GLU HIS THR ARG ARG GLU LEU ALA LYS MET LYS GLN SEQRES 13 A 201 GLU PRO VAL ARG SER GLU GLU GLY ARG ASP MET ALA ASN SEQRES 14 A 201 ARG ILE SER ALA PHE GLY TYR LEU GLU CYS SER ALA LYS SEQRES 15 A 201 THR LYS GLU GLY VAL ARG GLU VAL PHE GLU MET ALA THR SEQRES 16 A 201 ARG ALA GLY LEU GLN VAL HET MG A2001 1 HET GDP A1001 28 HET EDO A3001 4 HET EDO A3002 4 HET EDO A3003 4 HET EDO A3004 4 HET EDO A3005 4 HETNAM MG MAGNESIUM ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 MG MG 2+ FORMUL 3 GDP C10 H15 N5 O11 P2 FORMUL 4 EDO 5(C2 H6 O2) FORMUL 9 HOH *217(H2 O) HELIX 1 1 GLY A 17 ASP A 28 1 12 HELIX 2 2 ASP A 65 ARG A 70 1 6 HELIX 3 3 PRO A 71 TYR A 74 5 4 HELIX 4 4 SER A 88 LYS A 98 1 11 HELIX 5 5 LYS A 98 CYS A 107 1 10 HELIX 6 6 LYS A 118 ARG A 122 5 5 HELIX 7 7 ASP A 124 LYS A 133 1 10 HELIX 8 8 ARG A 140 ILE A 151 1 12 HELIX 9 9 GLY A 166 LEU A 179 1 14 SHEET 1 A 6 ILE A 43 VAL A 48 0 SHEET 2 A 6 LYS A 51 TRP A 58 -1 O LEU A 55 N ALA A 44 SHEET 3 A 6 ILE A 4 GLY A 12 1 N ILE A 4 O GLU A 54 SHEET 4 A 6 VAL A 79 SER A 85 1 O CYS A 83 N VAL A 11 SHEET 5 A 6 ILE A 112 ASN A 117 1 O ASN A 117 N PHE A 84 SHEET 6 A 6 GLY A 155 GLU A 158 1 O LEU A 157 N GLY A 116 LINK OG1 THR A 19 MG MG A2001 1555 1555 2.18 LINK O THR A 37 MG MG A2001 1555 1555 2.19 LINK O1B GDP A1001 MG MG A2001 1555 1555 2.09 LINK MG MG A2001 O HOH A3143 1555 1555 2.13 LINK MG MG A2001 O HOH A3144 1555 1555 2.09 LINK MG MG A2001 O HOH A3145 1555 1555 2.11 SITE 1 AC1 6 THR A 19 THR A 37 GDP A1001 HOH A3143 SITE 2 AC1 6 HOH A3144 HOH A3145 SITE 1 AC2 24 ALA A 15 CYS A 16 GLY A 17 LYS A 18 SITE 2 AC2 24 THR A 19 CYS A 20 PHE A 30 VAL A 35 SITE 3 AC2 24 LYS A 118 ASP A 120 LEU A 121 SER A 160 SITE 4 AC2 24 ALA A 161 LYS A 162 MG A2001 HOH A3011 SITE 5 AC2 24 HOH A3046 HOH A3049 HOH A3059 HOH A3079 SITE 6 AC2 24 HOH A3143 HOH A3144 HOH A3145 HOH A3197 SITE 1 AC3 4 PHE A 154 THR A 163 GLU A 165 HOH A3073 SITE 1 AC4 9 ARG A 122 ALA A 177 GLY A 178 LEU A 179 SITE 2 AC4 9 EDO A3003 HOH A3102 HOH A3117 HOH A3118 SITE 3 AC4 9 HOH A3125 SITE 1 AC5 5 ARG A 176 LEU A 179 EDO A3002 HOH A3051 SITE 2 AC5 5 HOH A3179 SITE 1 AC6 9 GLY A 62 ASP A 67 ARG A 70 LYS A 98 SITE 2 AC6 9 TRP A 99 HOH A3044 HOH A3122 HOH A3163 SITE 3 AC6 9 HOH A3188 SITE 1 AC7 3 ILE A 43 ASP A 45 ASP A 90 CRYST1 44.214 56.617 81.834 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022620 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017660 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012220 0.00000