HEADER OXIDOREDUCTASE 21-MAR-06 2GEX TITLE CRYSTAL STRUCTURE OF SNOAL2 A PUTATIVE HYDROXYLASE FROM STREPTOMYCES TITLE 2 NOGALATER COMPND MOL_ID: 1; COMPND 2 MOLECULE: SNOL; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SNOAL2, PUTATIVE HYDROXYLASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES NOGALATER; SOURCE 3 ORGANISM_TAXID: 38314; SOURCE 4 GENE: SNOAL2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET30B KEYWDS ALPHA+BETA BARREL, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR P.BEINKER,B.LOHKAMP,G.SCHNEIDER REVDAT 3 13-JUL-11 2GEX 1 VERSN REVDAT 2 24-FEB-09 2GEX 1 VERSN REVDAT 1 18-JUL-06 2GEX 0 JRNL AUTH P.BEINKER,B.LOHKAMP,T.PELTONEN,J.NIEMI,P.MANTSALA, JRNL AUTH 2 G.SCHNEIDER JRNL TITL CRYSTAL STRUCTURES OF SNOAL2 AND ACLR: TWO PUTATIVE JRNL TITL 2 HYDROXYLASES IN THE BIOSYNTHESIS OF AROMATIC POLYKETIDE JRNL TITL 3 ANTIBIOTICS JRNL REF J.MOL.BIOL. V. 359 728 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16650858 JRNL DOI 10.1016/J.JMB.2006.03.060 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 18058 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 964 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1111 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.35 REMARK 3 BIN R VALUE (WORKING SET) : 0.3360 REMARK 3 BIN FREE R VALUE SET COUNT : 69 REMARK 3 BIN FREE R VALUE : 0.3860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2212 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 31 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 64.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.29000 REMARK 3 B22 (A**2) : 0.29000 REMARK 3 B33 (A**2) : -0.43000 REMARK 3 B12 (A**2) : 0.14000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.281 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.226 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.166 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.550 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.936 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2302 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3142 ; 1.448 ; 1.926 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 291 ; 6.218 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 116 ;34.690 ;22.586 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 366 ;18.694 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;18.786 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 345 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1798 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 923 ; 0.225 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1553 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 80 ; 0.153 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 14 ; 0.067 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.197 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1444 ; 0.993 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2279 ; 1.262 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 990 ; 2.120 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 856 ; 3.320 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 147 REMARK 3 ORIGIN FOR THE GROUP (A): 36.4156 30.3661 14.4642 REMARK 3 T TENSOR REMARK 3 T11: -0.1404 T22: -0.0150 REMARK 3 T33: -0.0953 T12: -0.0157 REMARK 3 T13: -0.0137 T23: -0.0677 REMARK 3 L TENSOR REMARK 3 L11: 1.2586 L22: 2.0511 REMARK 3 L33: 3.4730 L12: -1.2910 REMARK 3 L13: 0.4003 L23: -1.1415 REMARK 3 S TENSOR REMARK 3 S11: 0.0838 S12: -0.2079 S13: -0.0134 REMARK 3 S21: 0.1795 S22: 0.0935 S23: -0.1625 REMARK 3 S31: -0.0922 S32: 0.0361 S33: -0.1773 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 134 REMARK 3 ORIGIN FOR THE GROUP (A): 56.4633 23.2093 21.5184 REMARK 3 T TENSOR REMARK 3 T11: -0.0706 T22: 0.0524 REMARK 3 T33: -0.0676 T12: 0.0771 REMARK 3 T13: -0.0504 T23: -0.0966 REMARK 3 L TENSOR REMARK 3 L11: 2.9045 L22: 1.7800 REMARK 3 L33: 1.9405 L12: 1.1738 REMARK 3 L13: 0.6384 L23: 0.1218 REMARK 3 S TENSOR REMARK 3 S11: -0.0226 S12: 0.6314 S13: -0.2796 REMARK 3 S21: -0.3189 S22: 0.1336 S23: -0.0594 REMARK 3 S31: 0.2231 S32: 0.1725 S33: -0.1110 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2GEX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-MAR-06. REMARK 100 THE RCSB ID CODE IS RCSB037033. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUL-04 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9790, 0.9788, 0.9823 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18909 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 13.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08200 REMARK 200 FOR THE DATA SET : 26.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.8 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.60500 REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18-20% PEG 8000, 0.2M MAGNESIUM REMARK 280 SULPHATE, 0.1M MES, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.80467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 38.90233 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 38.90233 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 77.80467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 HIS A 148 REMARK 465 HIS A 149 REMARK 465 HIS A 150 REMARK 465 HIS A 151 REMARK 465 HIS A 152 REMARK 465 MSE B 1 REMARK 465 VAL B 135 REMARK 465 PRO B 136 REMARK 465 ASP B 137 REMARK 465 GLY B 138 REMARK 465 LEU B 139 REMARK 465 LYS B 140 REMARK 465 LEU B 141 REMARK 465 ALA B 142 REMARK 465 ALA B 143 REMARK 465 ALA B 144 REMARK 465 LEU B 145 REMARK 465 GLU B 146 REMARK 465 HIS B 147 REMARK 465 HIS B 148 REMARK 465 HIS B 149 REMARK 465 HIS B 150 REMARK 465 HIS B 151 REMARK 465 HIS B 152 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 51 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 147 CG ND1 CD2 CE1 NE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 41 CG CD CE NZ REMARK 480 GLU A 112 CD OE1 OE2 REMARK 480 LYS B 41 CD CE NZ REMARK 480 LYS B 99 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 104 OD2 ASP A 121 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 41 CB LYS A 41 CG -0.214 REMARK 500 LYS B 41 CG LYS B 41 CD -0.237 REMARK 500 LYS B 99 CG LYS B 99 CD -0.205 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 112 CG - CD - OE1 ANGL. DEV. = 25.1 DEGREES REMARK 500 GLU A 112 CG - CD - OE2 ANGL. DEV. = -25.9 DEGREES REMARK 500 LYS B 41 CB - CG - CD ANGL. DEV. = 31.5 DEGREES REMARK 500 LEU B 78 CA - CB - CG ANGL. DEV. = 15.0 DEGREES REMARK 500 LYS B 99 CD - CE - NZ ANGL. DEV. = 24.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 37 171.95 -38.20 REMARK 500 ASP A 131 -80.69 -65.79 REMARK 500 VAL A 134 34.61 71.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2GEY RELATED DB: PDB DBREF 2GEX A 1 139 UNP Q9RN64 Q9RN64_STRNO 1 139 DBREF 2GEX B 1 139 UNP Q9RN64 Q9RN64_STRNO 1 139 SEQADV 2GEX MSE A 1 UNP Q9RN64 MET 1 MODIFIED RESIDUE SEQADV 2GEX MSE A 13 UNP Q9RN64 MET 13 MODIFIED RESIDUE SEQADV 2GEX MSE A 52 UNP Q9RN64 MET 52 MODIFIED RESIDUE SEQADV 2GEX MSE A 77 UNP Q9RN64 MET 77 MODIFIED RESIDUE SEQADV 2GEX MSE A 91 UNP Q9RN64 MET 91 MODIFIED RESIDUE SEQADV 2GEX LYS A 140 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX LEU A 141 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX ALA A 142 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX ALA A 143 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX ALA A 144 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX LEU A 145 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX GLU A 146 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX HIS A 147 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX HIS A 148 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX HIS A 149 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX HIS A 150 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX HIS A 151 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX HIS A 152 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX MSE B 1 UNP Q9RN64 MET 1 MODIFIED RESIDUE SEQADV 2GEX MSE B 13 UNP Q9RN64 MET 13 MODIFIED RESIDUE SEQADV 2GEX MSE B 52 UNP Q9RN64 MET 52 MODIFIED RESIDUE SEQADV 2GEX MSE B 77 UNP Q9RN64 MET 77 MODIFIED RESIDUE SEQADV 2GEX MSE B 91 UNP Q9RN64 MET 91 MODIFIED RESIDUE SEQADV 2GEX LYS B 140 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX LEU B 141 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX ALA B 142 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX ALA B 143 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX ALA B 144 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX LEU B 145 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX GLU B 146 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX HIS B 147 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX HIS B 148 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX HIS B 149 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX HIS B 150 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX HIS B 151 UNP Q9RN64 EXPRESSION TAG SEQADV 2GEX HIS B 152 UNP Q9RN64 EXPRESSION TAG SEQRES 1 A 152 MSE SER THR THR ALA ASN LYS GLU ARG CYS LEU GLU MSE SEQRES 2 A 152 VAL ALA ALA TRP ASN ARG TRP ASP VAL SER GLY VAL VAL SEQRES 3 A 152 ALA HIS TRP ALA PRO ASP VAL VAL HIS TYR ASP ASP GLU SEQRES 4 A 152 ASP LYS PRO VAL SER ALA GLU GLU VAL VAL ARG ARG MSE SEQRES 5 A 152 ASN SER ALA VAL GLU ALA PHE PRO ASP LEU ARG LEU ASP SEQRES 6 A 152 VAL ARG SER ILE VAL GLY GLU GLY ASP ARG VAL MSE LEU SEQRES 7 A 152 ARG ILE THR CYS SER ALA THR HIS GLN GLY VAL PHE MSE SEQRES 8 A 152 GLY ILE ALA PRO THR GLY ARG LYS VAL ARG TRP THR TYR SEQRES 9 A 152 LEU GLU GLU LEU ARG PHE SER GLU ALA GLY LYS VAL VAL SEQRES 10 A 152 GLU HIS TRP ASP VAL PHE ASN PHE SER PRO LEU PHE ARG SEQRES 11 A 152 ASP LEU GLY VAL VAL PRO ASP GLY LEU LYS LEU ALA ALA SEQRES 12 A 152 ALA LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 152 MSE SER THR THR ALA ASN LYS GLU ARG CYS LEU GLU MSE SEQRES 2 B 152 VAL ALA ALA TRP ASN ARG TRP ASP VAL SER GLY VAL VAL SEQRES 3 B 152 ALA HIS TRP ALA PRO ASP VAL VAL HIS TYR ASP ASP GLU SEQRES 4 B 152 ASP LYS PRO VAL SER ALA GLU GLU VAL VAL ARG ARG MSE SEQRES 5 B 152 ASN SER ALA VAL GLU ALA PHE PRO ASP LEU ARG LEU ASP SEQRES 6 B 152 VAL ARG SER ILE VAL GLY GLU GLY ASP ARG VAL MSE LEU SEQRES 7 B 152 ARG ILE THR CYS SER ALA THR HIS GLN GLY VAL PHE MSE SEQRES 8 B 152 GLY ILE ALA PRO THR GLY ARG LYS VAL ARG TRP THR TYR SEQRES 9 B 152 LEU GLU GLU LEU ARG PHE SER GLU ALA GLY LYS VAL VAL SEQRES 10 B 152 GLU HIS TRP ASP VAL PHE ASN PHE SER PRO LEU PHE ARG SEQRES 11 B 152 ASP LEU GLY VAL VAL PRO ASP GLY LEU LYS LEU ALA ALA SEQRES 12 B 152 ALA LEU GLU HIS HIS HIS HIS HIS HIS MODRES 2GEX MSE A 13 MET SELENOMETHIONINE MODRES 2GEX MSE A 52 MET SELENOMETHIONINE MODRES 2GEX MSE A 77 MET SELENOMETHIONINE MODRES 2GEX MSE A 91 MET SELENOMETHIONINE MODRES 2GEX MSE B 13 MET SELENOMETHIONINE MODRES 2GEX MSE B 52 MET SELENOMETHIONINE MODRES 2GEX MSE B 77 MET SELENOMETHIONINE MODRES 2GEX MSE B 91 MET SELENOMETHIONINE HET MSE A 13 8 HET MSE A 52 8 HET MSE A 77 8 HET MSE A 91 8 HET MSE B 13 8 HET MSE B 52 8 HET MSE B 77 8 HET MSE B 91 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 HOH *31(H2 O) HELIX 1 1 SER A 2 ARG A 19 1 18 HELIX 2 2 ASP A 21 ALA A 27 1 7 HELIX 3 3 SER A 44 PHE A 59 1 16 HELIX 4 4 PHE A 125 LEU A 132 1 8 HELIX 5 5 VAL A 135 GLU A 146 1 12 HELIX 6 6 SER B 2 ARG B 19 1 18 HELIX 7 7 ASP B 21 ALA B 27 1 7 HELIX 8 8 SER B 44 PHE B 59 1 16 HELIX 9 9 ASP B 121 SER B 126 5 6 HELIX 10 10 LEU B 128 LEU B 132 5 5 SHEET 1 A 6 PRO A 42 VAL A 43 0 SHEET 2 A 6 TRP A 29 TYR A 36 -1 N HIS A 35 O VAL A 43 SHEET 3 A 6 VAL A 116 ASN A 124 1 O HIS A 119 N TYR A 36 SHEET 4 A 6 LYS A 99 PHE A 110 -1 N LEU A 105 O VAL A 122 SHEET 5 A 6 ARG A 75 THR A 85 -1 N ILE A 80 O TYR A 104 SHEET 6 A 6 ARG A 63 GLU A 72 -1 N ASP A 65 O THR A 81 SHEET 1 B 6 PRO B 42 VAL B 43 0 SHEET 2 B 6 TRP B 29 TYR B 36 -1 N HIS B 35 O VAL B 43 SHEET 3 B 6 VAL B 116 TRP B 120 1 O HIS B 119 N TYR B 36 SHEET 4 B 6 LYS B 99 PHE B 110 -1 N ARG B 109 O VAL B 117 SHEET 5 B 6 ARG B 75 THR B 85 -1 N CYS B 82 O TRP B 102 SHEET 6 B 6 ARG B 63 GLU B 72 -1 N ARG B 67 O ARG B 79 LINK C GLU A 12 N MSE A 13 1555 1555 1.33 LINK C MSE A 13 N VAL A 14 1555 1555 1.33 LINK C ARG A 51 N MSE A 52 1555 1555 1.33 LINK C MSE A 52 N ASN A 53 1555 1555 1.33 LINK C VAL A 76 N MSE A 77 1555 1555 1.33 LINK C MSE A 77 N LEU A 78 1555 1555 1.33 LINK C PHE A 90 N MSE A 91 1555 1555 1.34 LINK C MSE A 91 N GLY A 92 1555 1555 1.34 LINK C GLU B 12 N MSE B 13 1555 1555 1.33 LINK C MSE B 13 N VAL B 14 1555 1555 1.33 LINK C ARG B 51 N MSE B 52 1555 1555 1.32 LINK C MSE B 52 N ASN B 53 1555 1555 1.34 LINK C VAL B 76 N MSE B 77 1555 1555 1.34 LINK C MSE B 77 N LEU B 78 1555 1555 1.33 LINK C PHE B 90 N MSE B 91 1555 1555 1.33 LINK C MSE B 91 N GLY B 92 1555 1555 1.34 CRYST1 90.008 90.008 116.707 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011110 0.006414 0.000000 0.00000 SCALE2 0.000000 0.012829 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008568 0.00000