data_2GGF # _entry.id 2GGF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2GGF pdb_00002ggf 10.2210/pdb2ggf/pdb RCSB RCSB037085 ? ? WWPDB D_1000037085 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsi002011605.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2GGF _pdbx_database_status.recvd_initial_deposition_date 2006-03-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nagata, T.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the MA3 domain of human Programmed cell death 4' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nagata, T.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? primary 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Programmed cell death 4, isoform 1' _entity.formula_weight 15453.612 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment MA3 _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGLVKEIDMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTITVD QMKRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAGIISKQLRDLCPSRSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGLVKEIDMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTITVD QMKRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAGIISKQLRDLCPSRSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsi002011605.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 LEU n 1 9 VAL n 1 10 LYS n 1 11 GLU n 1 12 ILE n 1 13 ASP n 1 14 MET n 1 15 LEU n 1 16 LEU n 1 17 LYS n 1 18 GLU n 1 19 TYR n 1 20 LEU n 1 21 LEU n 1 22 SER n 1 23 GLY n 1 24 ASP n 1 25 ILE n 1 26 SER n 1 27 GLU n 1 28 ALA n 1 29 GLU n 1 30 HIS n 1 31 CYS n 1 32 LEU n 1 33 LYS n 1 34 GLU n 1 35 LEU n 1 36 GLU n 1 37 VAL n 1 38 PRO n 1 39 HIS n 1 40 PHE n 1 41 HIS n 1 42 HIS n 1 43 GLU n 1 44 LEU n 1 45 VAL n 1 46 TYR n 1 47 GLU n 1 48 ALA n 1 49 ILE n 1 50 ILE n 1 51 MET n 1 52 VAL n 1 53 LEU n 1 54 GLU n 1 55 SER n 1 56 THR n 1 57 GLY n 1 58 GLU n 1 59 SER n 1 60 THR n 1 61 PHE n 1 62 LYS n 1 63 MET n 1 64 ILE n 1 65 LEU n 1 66 ASP n 1 67 LEU n 1 68 LEU n 1 69 LYS n 1 70 SER n 1 71 LEU n 1 72 TRP n 1 73 LYS n 1 74 SER n 1 75 SER n 1 76 THR n 1 77 ILE n 1 78 THR n 1 79 VAL n 1 80 ASP n 1 81 GLN n 1 82 MET n 1 83 LYS n 1 84 ARG n 1 85 GLY n 1 86 TYR n 1 87 GLU n 1 88 ARG n 1 89 ILE n 1 90 TYR n 1 91 ASN n 1 92 GLU n 1 93 ILE n 1 94 PRO n 1 95 ASP n 1 96 ILE n 1 97 ASN n 1 98 LEU n 1 99 ASP n 1 100 VAL n 1 101 PRO n 1 102 HIS n 1 103 SER n 1 104 TYR n 1 105 SER n 1 106 VAL n 1 107 LEU n 1 108 GLU n 1 109 ARG n 1 110 PHE n 1 111 VAL n 1 112 GLU n 1 113 GLU n 1 114 CYS n 1 115 PHE n 1 116 GLN n 1 117 ALA n 1 118 GLY n 1 119 ILE n 1 120 ILE n 1 121 SER n 1 122 LYS n 1 123 GLN n 1 124 LEU n 1 125 ARG n 1 126 ASP n 1 127 LEU n 1 128 CYS n 1 129 PRO n 1 130 SER n 1 131 ARG n 1 132 SER n 1 133 GLY n 1 134 PRO n 1 135 SER n 1 136 SER n 1 137 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene PDCD4 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050302-19 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code AAH26104 _struct_ref.pdbx_db_accession 19913545 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LVKEIDMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTITVDQMKRGYE RIYNEIPDINLDVPHSYSVLERFVEECFQAGIISKQLRDLCPSR ; _struct_ref.pdbx_align_begin 327 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2GGF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 131 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 19913545 _struct_ref_seq.db_align_beg 327 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 450 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 327 _struct_ref_seq.pdbx_auth_seq_align_end 450 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2GGF GLY A 1 ? GB 19913545 ? ? 'cloning artifact' 320 1 1 2GGF SER A 2 ? GB 19913545 ? ? 'cloning artifact' 321 2 1 2GGF SER A 3 ? GB 19913545 ? ? 'cloning artifact' 322 3 1 2GGF GLY A 4 ? GB 19913545 ? ? 'cloning artifact' 323 4 1 2GGF SER A 5 ? GB 19913545 ? ? 'cloning artifact' 324 5 1 2GGF SER A 6 ? GB 19913545 ? ? 'cloning artifact' 325 6 1 2GGF GLY A 7 ? GB 19913545 ? ? 'cloning artifact' 326 7 1 2GGF SER A 132 ? GB 19913545 ? ? 'cloning artifact' 451 8 1 2GGF GLY A 133 ? GB 19913545 ? ? 'cloning artifact' 452 9 1 2GGF PRO A 134 ? GB 19913545 ? ? 'cloning artifact' 453 10 1 2GGF SER A 135 ? GB 19913545 ? ? 'cloning artifact' 454 11 1 2GGF SER A 136 ? GB 19913545 ? ? 'cloning artifact' 455 12 1 2GGF GLY A 137 ? GB 19913545 ? ? 'cloning artifact' 456 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.36mM 13C/15N-MA3; 20mM d-Tris-HCl(pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2GGF _pdbx_nmr_refine.method 'torsion angle dyanamics, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2GGF _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2GGF _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20030801/20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9736 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2GGF _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2GGF _struct.title 'Solution structure of the MA3 domain of human Programmed cell death 4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2GGF _struct_keywords.pdbx_keywords TRANSLATION _struct_keywords.text ;MA3, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSLATION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 VAL A 9 ? SER A 22 ? VAL A 328 SER A 341 1 ? 14 HELX_P HELX_P2 2 ILE A 25 ? GLU A 34 ? ILE A 344 GLU A 353 1 ? 10 HELX_P HELX_P3 3 HIS A 41 ? GLU A 54 ? HIS A 360 GLU A 373 1 ? 14 HELX_P HELX_P4 4 THR A 60 ? LYS A 73 ? THR A 379 LYS A 392 1 ? 14 HELX_P HELX_P5 5 VAL A 79 ? ASN A 91 ? VAL A 398 ASN A 410 1 ? 13 HELX_P HELX_P6 6 ILE A 93 ? ASP A 99 ? ILE A 412 ASP A 418 1 ? 7 HELX_P HELX_P7 7 SER A 103 ? ALA A 117 ? SER A 422 ALA A 436 1 ? 15 HELX_P HELX_P8 8 LYS A 122 ? LEU A 127 ? LYS A 441 LEU A 446 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 2GGF _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2GGF _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 320 320 GLY GLY A . n A 1 2 SER 2 321 321 SER SER A . n A 1 3 SER 3 322 322 SER SER A . n A 1 4 GLY 4 323 323 GLY GLY A . n A 1 5 SER 5 324 324 SER SER A . n A 1 6 SER 6 325 325 SER SER A . n A 1 7 GLY 7 326 326 GLY GLY A . n A 1 8 LEU 8 327 327 LEU LEU A . n A 1 9 VAL 9 328 328 VAL VAL A . n A 1 10 LYS 10 329 329 LYS LYS A . n A 1 11 GLU 11 330 330 GLU GLU A . n A 1 12 ILE 12 331 331 ILE ILE A . n A 1 13 ASP 13 332 332 ASP ASP A . n A 1 14 MET 14 333 333 MET MET A . n A 1 15 LEU 15 334 334 LEU LEU A . n A 1 16 LEU 16 335 335 LEU LEU A . n A 1 17 LYS 17 336 336 LYS LYS A . n A 1 18 GLU 18 337 337 GLU GLU A . n A 1 19 TYR 19 338 338 TYR TYR A . n A 1 20 LEU 20 339 339 LEU LEU A . n A 1 21 LEU 21 340 340 LEU LEU A . n A 1 22 SER 22 341 341 SER SER A . n A 1 23 GLY 23 342 342 GLY GLY A . n A 1 24 ASP 24 343 343 ASP ASP A . n A 1 25 ILE 25 344 344 ILE ILE A . n A 1 26 SER 26 345 345 SER SER A . n A 1 27 GLU 27 346 346 GLU GLU A . n A 1 28 ALA 28 347 347 ALA ALA A . n A 1 29 GLU 29 348 348 GLU GLU A . n A 1 30 HIS 30 349 349 HIS HIS A . n A 1 31 CYS 31 350 350 CYS CYS A . n A 1 32 LEU 32 351 351 LEU LEU A . n A 1 33 LYS 33 352 352 LYS LYS A . n A 1 34 GLU 34 353 353 GLU GLU A . n A 1 35 LEU 35 354 354 LEU LEU A . n A 1 36 GLU 36 355 355 GLU GLU A . n A 1 37 VAL 37 356 356 VAL VAL A . n A 1 38 PRO 38 357 357 PRO PRO A . n A 1 39 HIS 39 358 358 HIS HIS A . n A 1 40 PHE 40 359 359 PHE PHE A . n A 1 41 HIS 41 360 360 HIS HIS A . n A 1 42 HIS 42 361 361 HIS HIS A . n A 1 43 GLU 43 362 362 GLU GLU A . n A 1 44 LEU 44 363 363 LEU LEU A . n A 1 45 VAL 45 364 364 VAL VAL A . n A 1 46 TYR 46 365 365 TYR TYR A . n A 1 47 GLU 47 366 366 GLU GLU A . n A 1 48 ALA 48 367 367 ALA ALA A . n A 1 49 ILE 49 368 368 ILE ILE A . n A 1 50 ILE 50 369 369 ILE ILE A . n A 1 51 MET 51 370 370 MET MET A . n A 1 52 VAL 52 371 371 VAL VAL A . n A 1 53 LEU 53 372 372 LEU LEU A . n A 1 54 GLU 54 373 373 GLU GLU A . n A 1 55 SER 55 374 374 SER SER A . n A 1 56 THR 56 375 375 THR THR A . n A 1 57 GLY 57 376 376 GLY GLY A . n A 1 58 GLU 58 377 377 GLU GLU A . n A 1 59 SER 59 378 378 SER SER A . n A 1 60 THR 60 379 379 THR THR A . n A 1 61 PHE 61 380 380 PHE PHE A . n A 1 62 LYS 62 381 381 LYS LYS A . n A 1 63 MET 63 382 382 MET MET A . n A 1 64 ILE 64 383 383 ILE ILE A . n A 1 65 LEU 65 384 384 LEU LEU A . n A 1 66 ASP 66 385 385 ASP ASP A . n A 1 67 LEU 67 386 386 LEU LEU A . n A 1 68 LEU 68 387 387 LEU LEU A . n A 1 69 LYS 69 388 388 LYS LYS A . n A 1 70 SER 70 389 389 SER SER A . n A 1 71 LEU 71 390 390 LEU LEU A . n A 1 72 TRP 72 391 391 TRP TRP A . n A 1 73 LYS 73 392 392 LYS LYS A . n A 1 74 SER 74 393 393 SER SER A . n A 1 75 SER 75 394 394 SER SER A . n A 1 76 THR 76 395 395 THR THR A . n A 1 77 ILE 77 396 396 ILE ILE A . n A 1 78 THR 78 397 397 THR THR A . n A 1 79 VAL 79 398 398 VAL VAL A . n A 1 80 ASP 80 399 399 ASP ASP A . n A 1 81 GLN 81 400 400 GLN GLN A . n A 1 82 MET 82 401 401 MET MET A . n A 1 83 LYS 83 402 402 LYS LYS A . n A 1 84 ARG 84 403 403 ARG ARG A . n A 1 85 GLY 85 404 404 GLY GLY A . n A 1 86 TYR 86 405 405 TYR TYR A . n A 1 87 GLU 87 406 406 GLU GLU A . n A 1 88 ARG 88 407 407 ARG ARG A . n A 1 89 ILE 89 408 408 ILE ILE A . n A 1 90 TYR 90 409 409 TYR TYR A . n A 1 91 ASN 91 410 410 ASN ASN A . n A 1 92 GLU 92 411 411 GLU GLU A . n A 1 93 ILE 93 412 412 ILE ILE A . n A 1 94 PRO 94 413 413 PRO PRO A . n A 1 95 ASP 95 414 414 ASP ASP A . n A 1 96 ILE 96 415 415 ILE ILE A . n A 1 97 ASN 97 416 416 ASN ASN A . n A 1 98 LEU 98 417 417 LEU LEU A . n A 1 99 ASP 99 418 418 ASP ASP A . n A 1 100 VAL 100 419 419 VAL VAL A . n A 1 101 PRO 101 420 420 PRO PRO A . n A 1 102 HIS 102 421 421 HIS HIS A . n A 1 103 SER 103 422 422 SER SER A . n A 1 104 TYR 104 423 423 TYR TYR A . n A 1 105 SER 105 424 424 SER SER A . n A 1 106 VAL 106 425 425 VAL VAL A . n A 1 107 LEU 107 426 426 LEU LEU A . n A 1 108 GLU 108 427 427 GLU GLU A . n A 1 109 ARG 109 428 428 ARG ARG A . n A 1 110 PHE 110 429 429 PHE PHE A . n A 1 111 VAL 111 430 430 VAL VAL A . n A 1 112 GLU 112 431 431 GLU GLU A . n A 1 113 GLU 113 432 432 GLU GLU A . n A 1 114 CYS 114 433 433 CYS CYS A . n A 1 115 PHE 115 434 434 PHE PHE A . n A 1 116 GLN 116 435 435 GLN GLN A . n A 1 117 ALA 117 436 436 ALA ALA A . n A 1 118 GLY 118 437 437 GLY GLY A . n A 1 119 ILE 119 438 438 ILE ILE A . n A 1 120 ILE 120 439 439 ILE ILE A . n A 1 121 SER 121 440 440 SER SER A . n A 1 122 LYS 122 441 441 LYS LYS A . n A 1 123 GLN 123 442 442 GLN GLN A . n A 1 124 LEU 124 443 443 LEU LEU A . n A 1 125 ARG 125 444 444 ARG ARG A . n A 1 126 ASP 126 445 445 ASP ASP A . n A 1 127 LEU 127 446 446 LEU LEU A . n A 1 128 CYS 128 447 447 CYS CYS A . n A 1 129 PRO 129 448 448 PRO PRO A . n A 1 130 SER 130 449 449 SER SER A . n A 1 131 ARG 131 450 450 ARG ARG A . n A 1 132 SER 132 451 451 SER SER A . n A 1 133 GLY 133 452 452 GLY GLY A . n A 1 134 PRO 134 453 453 PRO PRO A . n A 1 135 SER 135 454 454 SER SER A . n A 1 136 SER 136 455 455 SER SER A . n A 1 137 GLY 137 456 456 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-04-24 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_remark.id 650 _pdbx_database_remark.text ;HELIX DETERMINATION METHOD: AUTHOR DETERMINED ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 378 ? ? -44.55 -75.05 2 1 LYS A 381 ? ? -65.15 -70.27 3 1 SER A 393 ? ? -88.01 32.29 4 1 GLN A 400 ? ? -38.95 -27.12 5 1 CYS A 447 ? ? -39.33 140.27 6 1 SER A 454 ? ? -39.11 93.62 7 2 SER A 322 ? ? -42.83 154.73 8 2 HIS A 361 ? ? -38.99 -37.81 9 2 SER A 378 ? ? -47.87 -72.78 10 2 SER A 393 ? ? -93.98 36.41 11 2 GLN A 400 ? ? -48.77 -70.32 12 2 ILE A 438 ? ? -37.45 -38.04 13 2 LYS A 441 ? ? -38.58 -34.41 14 2 ARG A 450 ? ? -85.42 40.48 15 3 GLU A 355 ? ? 34.54 40.62 16 3 GLU A 377 ? ? -83.67 38.86 17 3 SER A 393 ? ? -93.73 35.71 18 3 LYS A 402 ? ? -55.95 -71.03 19 3 CYS A 447 ? ? -38.92 124.03 20 3 PRO A 453 ? ? -69.75 -177.91 21 4 SER A 321 ? ? -49.57 157.22 22 4 SER A 393 ? ? -93.84 33.09 23 4 CYS A 447 ? ? -36.83 126.86 24 5 ASP A 332 ? ? -59.15 -70.85 25 5 GLU A 355 ? ? 39.99 44.58 26 5 GLU A 377 ? ? -85.81 35.46 27 5 SER A 378 ? ? -102.02 -71.76 28 5 SER A 393 ? ? -90.88 34.70 29 5 GLN A 400 ? ? -39.82 -33.49 30 5 SER A 449 ? ? -171.22 134.51 31 5 ARG A 450 ? ? -112.05 79.44 32 6 PHE A 359 ? ? -86.93 35.00 33 6 HIS A 361 ? ? -38.28 -37.05 34 6 SER A 374 ? ? -48.01 166.54 35 6 GLU A 377 ? ? -83.57 40.66 36 6 SER A 378 ? ? -100.79 -61.12 37 6 LYS A 388 ? ? -50.42 -70.85 38 6 SER A 393 ? ? -90.63 35.01 39 6 SER A 394 ? ? 39.58 42.81 40 6 CYS A 447 ? ? -39.03 120.95 41 6 PRO A 453 ? ? -69.77 97.88 42 7 VAL A 328 ? ? -38.34 -37.17 43 7 GLU A 377 ? ? -108.97 42.60 44 7 SER A 378 ? ? -107.37 -60.62 45 7 SER A 393 ? ? -97.58 38.43 46 7 SER A 394 ? ? 39.85 50.79 47 7 LYS A 402 ? ? -54.02 -70.17 48 7 SER A 454 ? ? -106.27 -60.63 49 8 VAL A 328 ? ? -38.54 -36.21 50 8 SER A 374 ? ? -49.06 174.15 51 8 THR A 375 ? ? -125.26 -51.85 52 8 SER A 378 ? ? -98.67 -71.99 53 8 LEU A 446 ? ? -37.13 -39.98 54 9 LEU A 327 ? ? -38.77 -39.00 55 9 GLU A 355 ? ? 39.17 43.74 56 9 SER A 378 ? ? -40.01 -71.28 57 9 SER A 393 ? ? -95.35 40.44 58 9 SER A 394 ? ? 37.51 51.20 59 9 GLN A 400 ? ? -50.42 -73.91 60 9 ARG A 450 ? ? -85.74 41.10 61 9 SER A 451 ? ? 34.82 50.21 62 10 LEU A 327 ? ? -92.22 -63.88 63 10 GLU A 355 ? ? 38.52 38.56 64 10 SER A 393 ? ? -91.59 39.34 65 10 SER A 394 ? ? 36.58 43.61 66 10 GLN A 400 ? ? -38.38 -35.99 67 10 SER A 454 ? ? -132.56 -46.60 68 11 LEU A 327 ? ? -127.75 -50.01 69 11 GLU A 355 ? ? 33.47 42.08 70 11 PHE A 359 ? ? -85.77 35.51 71 11 SER A 378 ? ? -38.97 -72.49 72 11 SER A 393 ? ? -95.23 32.81 73 11 CYS A 447 ? ? -37.58 130.89 74 11 SER A 449 ? ? -174.83 115.78 75 12 ASP A 332 ? ? -78.47 -74.48 76 12 LEU A 390 ? ? -39.81 -35.22 77 13 SER A 378 ? ? -49.98 -74.59 78 13 SER A 393 ? ? -92.76 39.41 79 13 SER A 394 ? ? 36.22 39.93 80 13 GLN A 400 ? ? -48.61 -74.13 81 13 MET A 401 ? ? -39.18 -35.70 82 13 CYS A 447 ? ? -34.31 121.38 83 14 PHE A 359 ? ? -95.51 32.90 84 14 SER A 374 ? ? -54.28 174.56 85 14 THR A 375 ? ? -125.22 -58.80 86 14 SER A 378 ? ? -99.08 -64.22 87 14 SER A 393 ? ? -89.94 34.15 88 14 GLN A 400 ? ? -38.38 -70.57 89 14 LYS A 402 ? ? -41.77 -70.53 90 14 CYS A 447 ? ? -35.59 113.35 91 14 SER A 451 ? ? 34.58 46.10 92 15 ASP A 332 ? ? -49.57 -70.49 93 15 LEU A 363 ? ? -35.95 -70.38 94 15 SER A 393 ? ? -93.86 40.66 95 15 SER A 394 ? ? 36.47 42.18 96 15 SER A 422 ? ? -34.37 -39.24 97 15 SER A 449 ? ? -168.08 111.88 98 15 PRO A 453 ? ? -69.79 1.81 99 15 SER A 454 ? ? -131.20 -46.74 100 16 SER A 325 ? ? -160.69 111.40 101 16 GLN A 400 ? ? -39.53 -37.95 102 16 SER A 449 ? ? -174.41 138.51 103 16 SER A 451 ? ? -169.05 110.56 104 17 GLU A 355 ? ? 37.09 44.07 105 17 SER A 378 ? ? -96.03 -73.33 106 17 LYS A 388 ? ? -53.39 -71.49 107 17 SER A 393 ? ? -90.16 34.57 108 17 SER A 394 ? ? 38.77 53.03 109 17 PRO A 453 ? ? -69.72 -179.46 110 18 SER A 324 ? ? -66.30 91.05 111 18 LYS A 381 ? ? -64.33 -70.69 112 18 CYS A 447 ? ? -40.47 109.20 113 18 ARG A 450 ? ? -86.99 46.93 114 19 ASP A 332 ? ? -59.41 -72.11 115 19 SER A 378 ? ? -102.94 -72.36 116 19 SER A 393 ? ? -91.70 39.25 117 19 SER A 394 ? ? 37.15 47.74 118 19 ARG A 444 ? ? -37.98 -39.35 119 19 CYS A 447 ? ? -38.75 124.19 120 19 PRO A 453 ? ? -69.81 90.17 121 20 GLU A 355 ? ? 35.36 54.11 122 20 GLN A 400 ? ? -45.53 -73.76 123 20 GLN A 442 ? ? -36.41 -36.32 124 20 CYS A 447 ? ? -39.76 124.80 #