HEADER TRANSFERASE 29-MAR-06 2GIQ TITLE HEPATITIS C VIRUS RNA-DEPENDENT RNA POLYMERASE NS5B WITH NNI-2 TITLE 2 INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-DIRECTED RNA POLYMERASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: HCV NS5B; COMPND 5 SYNONYM: NS5B, P68; COMPND 6 EC: 2.7.7.48; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HEPATITIS C VIRUS (ISOLATE BK); SOURCE 3 ORGANISM_TAXID: 11105; SOURCE 4 STRAIN: GENOTYPE 1B; STRAIN BK; SOURCE 5 GENE: NS5B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS HCV, HEPATITIS, NS5B, TRANSFERASE, RNA-DEPENDENT RNA POLYMERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.F.HARRIS REVDAT 6 14-FEB-24 2GIQ 1 REMARK SEQADV REVDAT 5 18-OCT-17 2GIQ 1 REMARK REVDAT 4 13-JUL-11 2GIQ 1 VERSN REVDAT 3 24-FEB-09 2GIQ 1 VERSN REVDAT 2 03-JUL-07 2GIQ 1 JRNL SOURCE REVDAT 1 03-APR-07 2GIQ 0 JRNL AUTH S.LE POGAM,H.KANG,S.F.HARRIS,V.LEVEQUE,A.M.GIANNETTI,S.ALI, JRNL AUTH 2 W.R.JIANG,S.RAJYAGURU,G.TAVARES,C.OSHIRO,T.HENDRICKS, JRNL AUTH 3 K.KLUMPP,J.SYMONS,M.F.BROWNER,N.CAMMACK,I.NAJERA JRNL TITL SELECTION AND CHARACTERIZATION OF REPLICON VARIANTS DUALLY JRNL TITL 2 RESISTANT TO THUMB- AND PALM-BINDING NONNUCLEOSIDE JRNL TITL 3 POLYMERASE INHIBITORS OF THE HEPATITIS C VIRUS. JRNL REF J.VIROL. V. 80 6146 2006 JRNL REFN ISSN 0022-538X JRNL PMID 16731953 JRNL DOI 10.1128/JVI.02628-05 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 121853 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 6497 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.70 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5577 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 58.63 REMARK 3 BIN R VALUE (WORKING SET) : 0.2760 REMARK 3 BIN FREE R VALUE SET COUNT : 309 REMARK 3 BIN FREE R VALUE : 0.3070 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8680 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 518 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9060 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 8244 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12328 ; 1.150 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): 19178 ; 0.815 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1142 ; 5.315 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 364 ;33.862 ;22.747 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1540 ;12.571 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 72 ;13.769 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1386 ; 0.065 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 10062 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1860 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1829 ; 0.212 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 8187 ; 0.174 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4500 ; 0.176 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 5202 ; 0.080 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 422 ; 0.120 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 17 ; 0.161 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 91 ; 0.193 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 15 ; 0.193 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7326 ; 0.805 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2270 ; 0.129 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 9156 ; 0.905 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4111 ; 1.544 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3166 ; 2.246 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 187 REMARK 3 RESIDUE RANGE : A 226 A 286 REMARK 3 ORIGIN FOR THE GROUP (A): 16.3421 -1.9570 -27.1790 REMARK 3 T TENSOR REMARK 3 T11: -0.0396 T22: 0.0020 REMARK 3 T33: -0.0401 T12: 0.0092 REMARK 3 T13: 0.0012 T23: 0.0130 REMARK 3 L TENSOR REMARK 3 L11: 0.2906 L22: 0.1683 REMARK 3 L33: 0.8943 L12: -0.1378 REMARK 3 L13: 0.2321 L23: -0.1858 REMARK 3 S TENSOR REMARK 3 S11: 0.0562 S12: 0.0680 S13: 0.0408 REMARK 3 S21: -0.0106 S22: -0.0545 S23: -0.0254 REMARK 3 S31: 0.0041 S32: 0.1116 S33: -0.0017 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 188 A 225 REMARK 3 RESIDUE RANGE : A 287 A 370 REMARK 3 ORIGIN FOR THE GROUP (A): -1.5572 -18.1084 -20.4049 REMARK 3 T TENSOR REMARK 3 T11: 0.0106 T22: 0.0226 REMARK 3 T33: -0.0404 T12: -0.0642 REMARK 3 T13: -0.0450 T23: 0.0265 REMARK 3 L TENSOR REMARK 3 L11: 0.4619 L22: 0.5794 REMARK 3 L33: 1.5037 L12: 0.2398 REMARK 3 L13: 0.1871 L23: 0.3225 REMARK 3 S TENSOR REMARK 3 S11: 0.1323 S12: -0.0600 S13: -0.0628 REMARK 3 S21: 0.0176 S22: -0.0882 S23: 0.0107 REMARK 3 S31: 0.2506 S32: -0.2570 S33: -0.0441 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 371 A 562 REMARK 3 ORIGIN FOR THE GROUP (A): 12.0823 -6.3642 2.7471 REMARK 3 T TENSOR REMARK 3 T11: -0.0305 T22: 0.0154 REMARK 3 T33: -0.0625 T12: -0.0159 REMARK 3 T13: -0.0112 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 0.5730 L22: 0.4748 REMARK 3 L33: 1.6557 L12: -0.0600 REMARK 3 L13: 0.4712 L23: -0.4027 REMARK 3 S TENSOR REMARK 3 S11: -0.0148 S12: -0.0956 S13: 0.0058 REMARK 3 S21: 0.0786 S22: 0.0522 S23: 0.0034 REMARK 3 S31: -0.0818 S32: -0.1838 S33: -0.0375 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 187 REMARK 3 RESIDUE RANGE : B 226 B 286 REMARK 3 ORIGIN FOR THE GROUP (A): -26.4337 1.9442 3.7886 REMARK 3 T TENSOR REMARK 3 T11: -0.0470 T22: -0.0062 REMARK 3 T33: -0.0261 T12: -0.0005 REMARK 3 T13: 0.0082 T23: 0.0118 REMARK 3 L TENSOR REMARK 3 L11: 0.4093 L22: 0.2243 REMARK 3 L33: 0.5934 L12: 0.1170 REMARK 3 L13: -0.1851 L23: -0.2117 REMARK 3 S TENSOR REMARK 3 S11: 0.0456 S12: -0.0628 S13: 0.0068 REMARK 3 S21: 0.0096 S22: -0.0551 S23: -0.0463 REMARK 3 S31: 0.0225 S32: 0.0663 S33: 0.0095 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 188 B 225 REMARK 3 RESIDUE RANGE : B 287 B 370 REMARK 3 ORIGIN FOR THE GROUP (A): -43.9084 18.6644 -2.4920 REMARK 3 T TENSOR REMARK 3 T11: -0.0390 T22: -0.0101 REMARK 3 T33: 0.0084 T12: 0.0367 REMARK 3 T13: 0.0402 T23: 0.0278 REMARK 3 L TENSOR REMARK 3 L11: 0.5042 L22: 0.7693 REMARK 3 L33: 0.8423 L12: -0.0185 REMARK 3 L13: 0.2029 L23: 0.0052 REMARK 3 S TENSOR REMARK 3 S11: 0.0388 S12: 0.0574 S13: 0.1316 REMARK 3 S21: 0.0517 S22: -0.0346 S23: 0.0771 REMARK 3 S31: -0.0856 S32: -0.1033 S33: -0.0042 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 371 B 562 REMARK 3 ORIGIN FOR THE GROUP (A): -30.9367 6.8969 -26.0879 REMARK 3 T TENSOR REMARK 3 T11: -0.0349 T22: 0.0250 REMARK 3 T33: -0.0471 T12: 0.0168 REMARK 3 T13: 0.0198 T23: 0.0270 REMARK 3 L TENSOR REMARK 3 L11: 0.7272 L22: 0.3954 REMARK 3 L33: 1.3015 L12: 0.1546 REMARK 3 L13: -0.4774 L23: -0.2118 REMARK 3 S TENSOR REMARK 3 S11: -0.0235 S12: 0.1674 S13: 0.0522 REMARK 3 S21: -0.0794 S22: 0.0301 S23: -0.0079 REMARK 3 S31: 0.1082 S32: -0.1214 S33: -0.0066 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2GIQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000037168. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 128433 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.11800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.71 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.54900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.090 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM NA CITRATE PH 4.9, 26% PEG 4000, REMARK 280 7.5% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.93600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.05200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.70800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.05200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.93600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.70800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 PRO A 149 REMARK 465 GLU A 150 REMARK 465 LYS A 151 REMARK 465 GLY A 152 REMARK 465 GLY A 153 REMARK 465 MET B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 PRO B 149 REMARK 465 GLU B 150 REMARK 465 LYS B 151 REMARK 465 GLY B 152 REMARK 465 GLY B 153 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 24 -167.47 -127.58 REMARK 500 VAL A 131 -31.13 -132.31 REMARK 500 LEU A 260 -55.20 -123.09 REMARK 500 LEU A 536 95.27 62.76 REMARK 500 LEU B 260 -58.18 -124.61 REMARK 500 ILE B 424 -62.25 -105.07 REMARK 500 GLU B 437 50.86 36.68 REMARK 500 LEU B 536 93.20 62.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NN2 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NN2 B 2001 DBREF 2GIQ A 2 562 UNP P26663 POLG_HCVBK 2420 2980 DBREF 2GIQ B 2 562 UNP P26663 POLG_HCVBK 2420 2980 SEQADV 2GIQ MET A -5 UNP P26663 CLONING ARTIFACT SEQADV 2GIQ HIS A -4 UNP P26663 EXPRESSION TAG SEQADV 2GIQ HIS A -3 UNP P26663 EXPRESSION TAG SEQADV 2GIQ HIS A -2 UNP P26663 EXPRESSION TAG SEQADV 2GIQ HIS A -1 UNP P26663 EXPRESSION TAG SEQADV 2GIQ HIS A 0 UNP P26663 EXPRESSION TAG SEQADV 2GIQ HIS A 1 UNP P26663 EXPRESSION TAG SEQADV 2GIQ MET B -5 UNP P26663 CLONING ARTIFACT SEQADV 2GIQ HIS B -4 UNP P26663 EXPRESSION TAG SEQADV 2GIQ HIS B -3 UNP P26663 EXPRESSION TAG SEQADV 2GIQ HIS B -2 UNP P26663 EXPRESSION TAG SEQADV 2GIQ HIS B -1 UNP P26663 EXPRESSION TAG SEQADV 2GIQ HIS B 0 UNP P26663 EXPRESSION TAG SEQADV 2GIQ HIS B 1 UNP P26663 EXPRESSION TAG SEQRES 1 A 568 MET HIS HIS HIS HIS HIS HIS MET SER TYR THR TRP THR SEQRES 2 A 568 GLY ALA LEU ILE THR PRO CYS ALA ALA GLU GLU SER LYS SEQRES 3 A 568 LEU PRO ILE ASN ALA LEU SER ASN SER LEU LEU ARG HIS SEQRES 4 A 568 HIS ASN MET VAL TYR ALA THR THR SER ARG SER ALA GLY SEQRES 5 A 568 LEU ARG GLN LYS LYS VAL THR PHE ASP ARG LEU GLN VAL SEQRES 6 A 568 LEU ASP ASP HIS TYR ARG ASP VAL LEU LYS GLU MET LYS SEQRES 7 A 568 ALA LYS ALA SER THR VAL LYS ALA LYS LEU LEU SER VAL SEQRES 8 A 568 GLU GLU ALA CYS LYS LEU THR PRO PRO HIS SER ALA LYS SEQRES 9 A 568 SER LYS PHE GLY TYR GLY ALA LYS ASP VAL ARG ASN LEU SEQRES 10 A 568 SER SER LYS ALA VAL ASN HIS ILE HIS SER VAL TRP LYS SEQRES 11 A 568 ASP LEU LEU GLU ASP THR VAL THR PRO ILE ASP THR THR SEQRES 12 A 568 ILE MET ALA LYS ASN GLU VAL PHE CYS VAL GLN PRO GLU SEQRES 13 A 568 LYS GLY GLY ARG LYS PRO ALA ARG LEU ILE VAL PHE PRO SEQRES 14 A 568 ASP LEU GLY VAL ARG VAL CYS GLU LYS MET ALA LEU TYR SEQRES 15 A 568 ASP VAL VAL SER THR LEU PRO GLN VAL VAL MET GLY SER SEQRES 16 A 568 SER TYR GLY PHE GLN TYR SER PRO GLY GLN ARG VAL GLU SEQRES 17 A 568 PHE LEU VAL ASN THR TRP LYS SER LYS LYS ASN PRO MET SEQRES 18 A 568 GLY PHE SER TYR ASP THR ARG CYS PHE ASP SER THR VAL SEQRES 19 A 568 THR GLU ASN ASP ILE ARG VAL GLU GLU SER ILE TYR GLN SEQRES 20 A 568 CYS CYS ASP LEU ALA PRO GLU ALA ARG GLN ALA ILE LYS SEQRES 21 A 568 SER LEU THR GLU ARG LEU TYR ILE GLY GLY PRO LEU THR SEQRES 22 A 568 ASN SER LYS GLY GLN ASN CYS GLY TYR ARG ARG CYS ARG SEQRES 23 A 568 ALA SER GLY VAL LEU THR THR SER CYS GLY ASN THR LEU SEQRES 24 A 568 THR CYS TYR LEU LYS ALA SER ALA ALA CYS ARG ALA ALA SEQRES 25 A 568 LYS LEU GLN ASP CYS THR MET LEU VAL ASN GLY ASP ASP SEQRES 26 A 568 LEU VAL VAL ILE CYS GLU SER ALA GLY THR GLN GLU ASP SEQRES 27 A 568 ALA ALA SER LEU ARG VAL PHE THR GLU ALA MET THR ARG SEQRES 28 A 568 TYR SER ALA PRO PRO GLY ASP PRO PRO GLN PRO GLU TYR SEQRES 29 A 568 ASP LEU GLU LEU ILE THR SER CYS SER SER ASN VAL SER SEQRES 30 A 568 VAL ALA HIS ASP ALA SER GLY LYS ARG VAL TYR TYR LEU SEQRES 31 A 568 THR ARG ASP PRO THR THR PRO LEU ALA ARG ALA ALA TRP SEQRES 32 A 568 GLU THR ALA ARG HIS THR PRO VAL ASN SER TRP LEU GLY SEQRES 33 A 568 ASN ILE ILE MET TYR ALA PRO THR LEU TRP ALA ARG MET SEQRES 34 A 568 ILE LEU MET THR HIS PHE PHE SER ILE LEU LEU ALA GLN SEQRES 35 A 568 GLU GLN LEU GLU LYS ALA LEU ASP CYS GLN ILE TYR GLY SEQRES 36 A 568 ALA CYS TYR SER ILE GLU PRO LEU ASP LEU PRO GLN ILE SEQRES 37 A 568 ILE GLU ARG LEU HIS GLY LEU SER ALA PHE SER LEU HIS SEQRES 38 A 568 SER TYR SER PRO GLY GLU ILE ASN ARG VAL ALA SER CYS SEQRES 39 A 568 LEU ARG LYS LEU GLY VAL PRO PRO LEU ARG VAL TRP ARG SEQRES 40 A 568 HIS ARG ALA ARG SER VAL ARG ALA ARG LEU LEU SER GLN SEQRES 41 A 568 GLY GLY ARG ALA ALA THR CYS GLY LYS TYR LEU PHE ASN SEQRES 42 A 568 TRP ALA VAL LYS THR LYS LEU LYS LEU THR PRO ILE PRO SEQRES 43 A 568 ALA ALA SER ARG LEU ASP LEU SER GLY TRP PHE VAL ALA SEQRES 44 A 568 GLY TYR SER GLY GLY ASP ILE TYR HIS SEQRES 1 B 568 MET HIS HIS HIS HIS HIS HIS MET SER TYR THR TRP THR SEQRES 2 B 568 GLY ALA LEU ILE THR PRO CYS ALA ALA GLU GLU SER LYS SEQRES 3 B 568 LEU PRO ILE ASN ALA LEU SER ASN SER LEU LEU ARG HIS SEQRES 4 B 568 HIS ASN MET VAL TYR ALA THR THR SER ARG SER ALA GLY SEQRES 5 B 568 LEU ARG GLN LYS LYS VAL THR PHE ASP ARG LEU GLN VAL SEQRES 6 B 568 LEU ASP ASP HIS TYR ARG ASP VAL LEU LYS GLU MET LYS SEQRES 7 B 568 ALA LYS ALA SER THR VAL LYS ALA LYS LEU LEU SER VAL SEQRES 8 B 568 GLU GLU ALA CYS LYS LEU THR PRO PRO HIS SER ALA LYS SEQRES 9 B 568 SER LYS PHE GLY TYR GLY ALA LYS ASP VAL ARG ASN LEU SEQRES 10 B 568 SER SER LYS ALA VAL ASN HIS ILE HIS SER VAL TRP LYS SEQRES 11 B 568 ASP LEU LEU GLU ASP THR VAL THR PRO ILE ASP THR THR SEQRES 12 B 568 ILE MET ALA LYS ASN GLU VAL PHE CYS VAL GLN PRO GLU SEQRES 13 B 568 LYS GLY GLY ARG LYS PRO ALA ARG LEU ILE VAL PHE PRO SEQRES 14 B 568 ASP LEU GLY VAL ARG VAL CYS GLU LYS MET ALA LEU TYR SEQRES 15 B 568 ASP VAL VAL SER THR LEU PRO GLN VAL VAL MET GLY SER SEQRES 16 B 568 SER TYR GLY PHE GLN TYR SER PRO GLY GLN ARG VAL GLU SEQRES 17 B 568 PHE LEU VAL ASN THR TRP LYS SER LYS LYS ASN PRO MET SEQRES 18 B 568 GLY PHE SER TYR ASP THR ARG CYS PHE ASP SER THR VAL SEQRES 19 B 568 THR GLU ASN ASP ILE ARG VAL GLU GLU SER ILE TYR GLN SEQRES 20 B 568 CYS CYS ASP LEU ALA PRO GLU ALA ARG GLN ALA ILE LYS SEQRES 21 B 568 SER LEU THR GLU ARG LEU TYR ILE GLY GLY PRO LEU THR SEQRES 22 B 568 ASN SER LYS GLY GLN ASN CYS GLY TYR ARG ARG CYS ARG SEQRES 23 B 568 ALA SER GLY VAL LEU THR THR SER CYS GLY ASN THR LEU SEQRES 24 B 568 THR CYS TYR LEU LYS ALA SER ALA ALA CYS ARG ALA ALA SEQRES 25 B 568 LYS LEU GLN ASP CYS THR MET LEU VAL ASN GLY ASP ASP SEQRES 26 B 568 LEU VAL VAL ILE CYS GLU SER ALA GLY THR GLN GLU ASP SEQRES 27 B 568 ALA ALA SER LEU ARG VAL PHE THR GLU ALA MET THR ARG SEQRES 28 B 568 TYR SER ALA PRO PRO GLY ASP PRO PRO GLN PRO GLU TYR SEQRES 29 B 568 ASP LEU GLU LEU ILE THR SER CYS SER SER ASN VAL SER SEQRES 30 B 568 VAL ALA HIS ASP ALA SER GLY LYS ARG VAL TYR TYR LEU SEQRES 31 B 568 THR ARG ASP PRO THR THR PRO LEU ALA ARG ALA ALA TRP SEQRES 32 B 568 GLU THR ALA ARG HIS THR PRO VAL ASN SER TRP LEU GLY SEQRES 33 B 568 ASN ILE ILE MET TYR ALA PRO THR LEU TRP ALA ARG MET SEQRES 34 B 568 ILE LEU MET THR HIS PHE PHE SER ILE LEU LEU ALA GLN SEQRES 35 B 568 GLU GLN LEU GLU LYS ALA LEU ASP CYS GLN ILE TYR GLY SEQRES 36 B 568 ALA CYS TYR SER ILE GLU PRO LEU ASP LEU PRO GLN ILE SEQRES 37 B 568 ILE GLU ARG LEU HIS GLY LEU SER ALA PHE SER LEU HIS SEQRES 38 B 568 SER TYR SER PRO GLY GLU ILE ASN ARG VAL ALA SER CYS SEQRES 39 B 568 LEU ARG LYS LEU GLY VAL PRO PRO LEU ARG VAL TRP ARG SEQRES 40 B 568 HIS ARG ALA ARG SER VAL ARG ALA ARG LEU LEU SER GLN SEQRES 41 B 568 GLY GLY ARG ALA ALA THR CYS GLY LYS TYR LEU PHE ASN SEQRES 42 B 568 TRP ALA VAL LYS THR LYS LEU LYS LEU THR PRO ILE PRO SEQRES 43 B 568 ALA ALA SER ARG LEU ASP LEU SER GLY TRP PHE VAL ALA SEQRES 44 B 568 GLY TYR SER GLY GLY ASP ILE TYR HIS HET NN2 A1001 30 HET NN2 B2001 30 HETNAM NN2 1-(2-CYCLOPROPYLETHYL)-3-(1,1-DIOXIDO-2H-1,2,4- HETNAM 2 NN2 BENZOTHIADIAZIN-3-YL)-6-FLUORO-4-HYDROXYQUINOLIN- HETNAM 3 NN2 2(1H)-ONE FORMUL 3 NN2 2(C21 H18 F N3 O4 S) FORMUL 5 HOH *518(H2 O) HELIX 1 1 LEU A 26 LEU A 31 1 6 HELIX 2 2 HIS A 33 ASN A 35 5 3 HELIX 3 3 THR A 41 ARG A 43 5 3 HELIX 4 4 SER A 44 THR A 53 1 10 HELIX 5 5 ASP A 61 SER A 76 1 16 HELIX 6 6 SER A 84 LEU A 91 1 8 HELIX 7 7 GLY A 104 ASN A 110 1 7 HELIX 8 8 SER A 112 ASP A 129 1 18 HELIX 9 9 ASP A 164 GLY A 188 1 25 HELIX 10 10 SER A 189 TYR A 195 5 7 HELIX 11 11 SER A 196 LYS A 211 1 16 HELIX 12 12 CYS A 223 VAL A 228 1 6 HELIX 13 13 THR A 229 GLN A 241 1 13 HELIX 14 14 ALA A 246 LEU A 260 1 15 HELIX 15 15 THR A 286 ALA A 306 1 21 HELIX 16 16 GLY A 328 TYR A 346 1 19 HELIX 17 17 ASP A 359 ILE A 363 5 5 HELIX 18 18 PRO A 388 ARG A 401 1 14 HELIX 19 19 ASN A 406 TYR A 415 1 10 HELIX 20 20 THR A 418 ILE A 424 1 7 HELIX 21 21 ILE A 424 GLN A 436 1 13 HELIX 22 22 GLU A 455 LEU A 457 5 3 HELIX 23 23 ASP A 458 GLY A 468 1 11 HELIX 24 24 LEU A 469 SER A 473 5 5 HELIX 25 25 SER A 478 GLY A 493 1 16 HELIX 26 26 PRO A 496 GLY A 515 1 20 HELIX 27 27 GLY A 515 PHE A 526 1 12 HELIX 28 28 ASN A 527 VAL A 530 5 4 HELIX 29 29 ILE A 539 ARG A 544 5 6 HELIX 30 30 LEU B 26 LEU B 31 1 6 HELIX 31 31 HIS B 33 ASN B 35 5 3 HELIX 32 32 THR B 41 ARG B 43 5 3 HELIX 33 33 SER B 44 VAL B 52 1 9 HELIX 34 34 ASP B 61 SER B 76 1 16 HELIX 35 35 SER B 84 LYS B 90 1 7 HELIX 36 36 GLY B 104 ASN B 110 1 7 HELIX 37 37 SER B 112 ASP B 129 1 18 HELIX 38 38 ASP B 164 GLY B 188 1 25 HELIX 39 39 SER B 189 TYR B 195 5 7 HELIX 40 40 SER B 196 LYS B 211 1 16 HELIX 41 41 CYS B 223 VAL B 228 1 6 HELIX 42 42 THR B 229 GLN B 241 1 13 HELIX 43 43 ALA B 246 LEU B 260 1 15 HELIX 44 44 THR B 286 ALA B 306 1 21 HELIX 45 45 GLY B 328 TYR B 346 1 19 HELIX 46 46 ASP B 359 ILE B 363 5 5 HELIX 47 47 PRO B 388 ARG B 401 1 14 HELIX 48 48 ASN B 406 TYR B 415 1 10 HELIX 49 49 THR B 418 ILE B 424 1 7 HELIX 50 50 ILE B 424 GLN B 436 1 13 HELIX 51 51 GLU B 455 LEU B 457 5 3 HELIX 52 52 ASP B 458 GLY B 468 1 11 HELIX 53 53 LEU B 469 SER B 473 5 5 HELIX 54 54 SER B 478 GLY B 493 1 16 HELIX 55 55 PRO B 496 GLY B 515 1 20 HELIX 56 56 GLY B 515 PHE B 526 1 12 HELIX 57 57 ASN B 527 VAL B 530 5 4 HELIX 58 58 ILE B 539 LEU B 545 5 7 SHEET 1 A 5 TYR A 4 TRP A 6 0 SHEET 2 A 5 ASN A 273 ARG A 277 -1 O TYR A 276 N THR A 5 SHEET 3 A 5 GLY A 264 THR A 267 -1 N LEU A 266 O CYS A 274 SHEET 4 A 5 THR A 136 ALA A 140 1 N THR A 136 O THR A 267 SHEET 5 A 5 LEU A 159 PHE A 162 -1 O ILE A 160 N MET A 139 SHEET 1 B 2 VAL A 37 ALA A 39 0 SHEET 2 B 2 VAL A 144 CYS A 146 -1 O PHE A 145 N TYR A 38 SHEET 1 C 3 PRO A 214 TYR A 219 0 SHEET 2 C 3 ASP A 319 GLU A 325 -1 O CYS A 324 N MET A 215 SHEET 3 C 3 GLN A 309 ASN A 316 -1 N GLN A 309 O GLU A 325 SHEET 1 D 2 ASN A 369 HIS A 374 0 SHEET 2 D 2 ARG A 380 THR A 385 -1 O VAL A 381 N ALA A 373 SHEET 1 E 2 LEU A 443 ILE A 447 0 SHEET 2 E 2 ALA A 450 ILE A 454 -1 O ILE A 454 N LEU A 443 SHEET 1 F 5 TYR B 4 TRP B 6 0 SHEET 2 F 5 ASN B 273 ARG B 277 -1 O TYR B 276 N THR B 5 SHEET 3 F 5 GLY B 264 THR B 267 -1 N LEU B 266 O CYS B 274 SHEET 4 F 5 THR B 136 ALA B 140 1 N THR B 136 O THR B 267 SHEET 5 F 5 LEU B 159 PHE B 162 -1 O PHE B 162 N THR B 137 SHEET 1 G 2 VAL B 37 ALA B 39 0 SHEET 2 G 2 VAL B 144 CYS B 146 -1 O PHE B 145 N TYR B 38 SHEET 1 H 3 PRO B 214 ASP B 220 0 SHEET 2 H 3 ASP B 319 GLU B 325 -1 O CYS B 324 N MET B 215 SHEET 3 H 3 GLN B 309 ASN B 316 -1 N GLN B 309 O GLU B 325 SHEET 1 I 2 ASN B 369 HIS B 374 0 SHEET 2 I 2 ARG B 380 THR B 385 -1 O THR B 385 N ASN B 369 SHEET 1 J 2 LEU B 443 ILE B 447 0 SHEET 2 J 2 ALA B 450 ILE B 454 -1 O ILE B 454 N LEU B 443 SITE 1 AC1 15 PHE A 193 ARG A 200 ASN A 316 CYS A 366 SITE 2 AC1 15 LEU A 384 GLY A 410 ASN A 411 MET A 414 SITE 3 AC1 15 TYR A 415 TYR A 448 GLY A 449 SER A 556 SITE 4 AC1 15 HOH A1030 HOH A1040 HOH A1121 SITE 1 AC2 16 PHE B 193 ARG B 200 ASN B 316 CYS B 366 SITE 2 AC2 16 SER B 368 LEU B 384 GLY B 410 ASN B 411 SITE 3 AC2 16 MET B 414 TYR B 415 TYR B 448 GLY B 449 SITE 4 AC2 16 SER B 556 HOH B2025 HOH B2044 HOH B2074 CRYST1 85.872 105.416 126.104 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011645 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009486 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007930 0.00000