HEADER HYDROLASE 30-MAR-06 2GJ8 TITLE STRUCTURE OF THE MNME G-DOMAIN IN COMPLEX WITH GDP*ALF4-, MG2+ AND K+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRNA MODIFICATION GTPASE TRME; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: G-DOMAIN (216-384); COMPND 5 SYNONYM: MNME; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI BL21(DE3); SOURCE 3 ORGANISM_TAXID: 469008; SOURCE 4 STRAIN: BL21DE3; SOURCE 5 GENE: TRME, MNME, THDF; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET 14B KEYWDS G-DOMAIN DIMER, ALPHA-BETA-SANDWICH, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.SCRIMA,A.WITTINGHOFER REVDAT 3 20-NOV-24 2GJ8 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 2GJ8 1 VERSN REVDAT 1 04-JUL-06 2GJ8 0 JRNL AUTH A.SCRIMA,A.WITTINGHOFER JRNL TITL DIMERISATION-DEPENDENT GTPASE REACTION OF MNME: HOW JRNL TITL 2 POTASSIUM ACTS AS GTPASE-ACTIVATING ELEMENT. JRNL REF EMBO J. V. 25 2940 2006 JRNL REFN ISSN 0261-4189 JRNL PMID 16763562 JRNL DOI 10.1038/SJ.EMBOJ.7601171 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 75468 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3975 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5583 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2450 REMARK 3 BIN FREE R VALUE SET COUNT : 289 REMARK 3 BIN FREE R VALUE : 0.3100 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4966 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 143 REMARK 3 SOLVENT ATOMS : 585 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.53 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.79000 REMARK 3 B22 (A**2) : 1.27000 REMARK 3 B33 (A**2) : -0.44000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.21000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.117 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.122 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.083 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.456 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5167 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7027 ; 1.568 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 650 ; 6.008 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 220 ;35.614 ;23.591 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 886 ;15.611 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 52 ;15.748 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 825 ; 0.120 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3791 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2483 ; 0.228 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3498 ; 0.299 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 434 ; 0.117 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 16 ; 0.104 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 88 ; 0.203 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.122 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3232 ; 0.847 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5202 ; 1.500 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1936 ; 2.649 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1825 ; 4.235 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2GJ8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000037185. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-DEC-05 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 79655 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.4700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.31200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16-19% PEG 3350, 100 MM MES PH 6.0, REMARK 280 200 MM MGCL2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.11350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT CORRESPONDS TO A G-DOMAIN DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 213 REMARK 465 SER A 214 REMARK 465 HIS A 215 REMARK 465 GLY A 377 REMARK 465 PHE A 378 REMARK 465 ASP A 379 REMARK 465 THR A 380 REMARK 465 ASN A 381 REMARK 465 MSE A 382 REMARK 465 GLU A 383 REMARK 465 GLY A 384 REMARK 465 GLY B 213 REMARK 465 SER B 214 REMARK 465 HIS B 215 REMARK 465 GLY B 216 REMARK 465 GLY B 377 REMARK 465 PHE B 378 REMARK 465 ASP B 379 REMARK 465 THR B 380 REMARK 465 ASN B 381 REMARK 465 MSE B 382 REMARK 465 GLU B 383 REMARK 465 GLY B 384 REMARK 465 GLY C 213 REMARK 465 SER C 214 REMARK 465 HIS C 215 REMARK 465 GLY C 377 REMARK 465 PHE C 378 REMARK 465 ASP C 379 REMARK 465 THR C 380 REMARK 465 ASN C 381 REMARK 465 MSE C 382 REMARK 465 GLU C 383 REMARK 465 GLY C 384 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS D 215 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL C 311 CG1 - CB - CG2 ANGL. DEV. = 11.3 DEGREES REMARK 500 ARG D 288 NE - CZ - NH1 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG D 288 NE - CZ - NH2 ANGL. DEV. = 4.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 252 -57.35 -128.97 REMARK 500 TRP A 317 77.82 -161.24 REMARK 500 LYS A 336 33.28 70.37 REMARK 500 ARG B 252 -54.55 -127.28 REMARK 500 ASP B 262 75.70 -159.03 REMARK 500 TRP B 317 80.75 -161.60 REMARK 500 LYS B 327 18.00 55.76 REMARK 500 LYS B 336 31.71 70.63 REMARK 500 ARG C 252 -55.02 -123.42 REMARK 500 SER C 347 -160.51 -124.95 REMARK 500 ARG D 252 -56.23 -125.89 REMARK 500 TRP D 317 76.27 -152.83 REMARK 500 LYS D 336 34.13 73.25 REMARK 500 VAL D 349 -170.91 173.36 REMARK 500 HIS D 352 -168.88 170.54 REMARK 500 GLU D 383 -90.55 114.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY D 213 SER D 214 -146.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 603 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 226 OD1 REMARK 620 2 THR A 245 O 86.5 REMARK 620 3 ILE A 247 O 81.5 90.1 REMARK 620 4 THR A 250 OG1 131.5 82.9 51.5 REMARK 620 5 ALF A 601 F2 114.6 153.3 77.8 70.8 REMARK 620 6 GDP A 650 O2A 115.9 73.9 154.8 106.2 108.0 REMARK 620 7 GDP A 650 O2B 89.3 142.9 125.7 125.3 58.0 75.0 REMARK 620 8 HOH A 654 O 151.7 103.2 124.4 76.6 66.4 45.2 66.8 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 230 OG REMARK 620 2 THR A 251 OG1 84.5 REMARK 620 3 ALF A 601 F3 170.5 86.2 REMARK 620 4 GDP A 650 O3B 98.3 177.2 91.0 REMARK 620 5 HOH A 654 O 87.0 93.2 95.7 86.8 REMARK 620 6 HOH A 655 O 90.9 89.2 86.8 90.9 176.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ALF A 601 AL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MG A 602 MG REMARK 620 2 ALF A 601 F1 94.1 REMARK 620 3 ALF A 601 F2 89.6 175.4 REMARK 620 4 ALF A 601 F3 18.6 90.7 92.0 REMARK 620 5 ALF A 601 F4 163.3 90.9 86.3 177.1 REMARK 620 6 K A 603 K 87.0 143.2 39.6 100.6 79.5 REMARK 620 7 GDP A 650 O2B 71.2 91.9 91.8 89.5 92.8 53.7 REMARK 620 8 GDP A 650 O3B 32.4 84.9 99.6 49.7 132.9 76.5 40.7 REMARK 620 9 HOH A 652 O 109.5 87.0 89.2 91.1 86.6 127.2 178.7 139.7 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 613 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 226 OD1 REMARK 620 2 THR B 245 O 86.6 REMARK 620 3 ILE B 247 O 81.8 92.2 REMARK 620 4 THR B 250 OG1 127.6 81.0 48.5 REMARK 620 5 ALF B 611 F4 119.2 150.2 78.3 71.5 REMARK 620 6 ALF B 611 F2 77.6 162.9 79.2 103.4 42.5 REMARK 620 7 GDP B 651 O2A 115.3 68.7 152.4 107.0 108.1 124.1 REMARK 620 8 GDP B 651 O3A 85.3 97.9 163.1 146.7 98.8 87.4 44.4 REMARK 620 9 GDP B 651 O2B 90.0 141.0 125.7 129.2 59.5 46.7 77.9 43.2 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 612 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 230 OG REMARK 620 2 THR B 251 OG1 79.5 REMARK 620 3 ALF B 611 F1 166.2 91.8 REMARK 620 4 GDP B 651 O3B 92.5 170.4 95.1 REMARK 620 5 HOH B 654 O 83.3 87.4 85.6 86.3 REMARK 620 6 HOH B 655 O 86.7 90.8 104.3 94.1 170.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ALF B 611 AL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MG B 612 MG REMARK 620 2 ALF B 611 F1 20.1 REMARK 620 3 ALF B 611 F2 161.7 177.9 REMARK 620 4 ALF B 611 F3 96.3 88.4 91.8 REMARK 620 5 ALF B 611 F4 84.9 92.4 87.3 178.7 REMARK 620 6 K B 613 K 87.0 104.4 76.7 141.9 38.7 REMARK 620 7 GDP B 651 O2B 73.2 91.6 90.5 90.6 90.3 54.0 REMARK 620 8 GDP B 651 O3B 33.6 49.9 132.2 84.0 97.3 78.0 42.3 REMARK 620 9 HOH B 653 O 112.4 93.4 84.6 84.8 94.2 128.9 173.1 141.7 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K C 623 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN C 226 OD1 REMARK 620 2 THR C 245 O 83.6 REMARK 620 3 ILE C 247 O 83.4 94.9 REMARK 620 4 THR C 250 OG1 130.7 82.9 51.0 REMARK 620 5 ALF C 621 F2 78.5 161.5 78.5 105.3 REMARK 620 6 ALF C 621 F4 120.9 152.5 77.4 71.7 43.2 REMARK 620 7 GDP C 652 O2A 112.8 69.0 154.7 105.9 122.6 107.6 REMARK 620 8 GDP C 652 O3A 84.6 96.9 162.2 144.0 86.2 97.7 43.2 REMARK 620 9 GDP C 652 O3B 90.8 139.4 124.5 127.9 46.4 58.8 76.4 42.6 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 622 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 230 OG REMARK 620 2 THR C 251 OG1 82.7 REMARK 620 3 ALF C 621 F1 172.5 90.3 REMARK 620 4 GDP C 652 O1B 95.8 174.6 91.4 REMARK 620 5 HOH C 653 O 88.7 96.1 89.4 89.1 REMARK 620 6 HOH C 654 O 87.8 86.8 94.5 88.0 175.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ALF C 621 AL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MG C 622 MG REMARK 620 2 ALF C 621 F1 16.2 REMARK 620 3 ALF C 621 F2 164.0 176.8 REMARK 620 4 ALF C 621 F3 94.1 90.7 92.3 REMARK 620 5 ALF C 621 F4 85.9 87.2 89.6 172.8 REMARK 620 6 K C 623 K 87.9 99.9 78.4 143.9 43.3 REMARK 620 7 GDP C 652 O3B 72.0 87.8 93.3 90.5 96.3 55.9 REMARK 620 8 GDP C 652 O1B 31.6 46.6 134.8 86.0 97.5 77.0 41.6 REMARK 620 9 HOH C 656 O 102.3 86.3 92.8 85.7 87.3 129.1 172.9 132.0 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K D 633 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN D 226 OD1 REMARK 620 2 THR D 245 O 83.6 REMARK 620 3 ILE D 247 O 85.5 93.7 REMARK 620 4 THR D 250 OG1 133.7 81.6 52.2 REMARK 620 5 ALF D 631 F2 122.5 150.5 76.6 70.4 REMARK 620 6 GDP D 653 O2A 113.0 69.4 152.3 102.2 107.0 REMARK 620 7 GDP D 653 O2B 93.5 141.6 124.3 124.0 57.4 76.8 REMARK 620 8 GDP D 653 O3A 83.4 98.3 162.7 142.0 98.2 45.0 43.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 632 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER D 230 OG REMARK 620 2 THR D 251 OG1 85.7 REMARK 620 3 ALF D 631 F3 174.8 91.3 REMARK 620 4 GDP D 653 O3B 93.6 177.7 89.5 REMARK 620 5 HOH D 657 O 88.6 94.3 87.4 87.9 REMARK 620 6 HOH D 658 O 88.1 93.6 96.3 84.1 171.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ALF D 631 AL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MG D 632 MG REMARK 620 2 ALF D 631 F1 96.4 REMARK 620 3 ALF D 631 F2 85.0 174.5 REMARK 620 4 ALF D 631 F3 18.3 91.3 88.4 REMARK 620 5 ALF D 631 F4 168.0 88.8 90.8 173.3 REMARK 620 6 K D 633 K 87.9 143.2 42.0 102.3 81.5 REMARK 620 7 GDP D 653 O3B 33.3 87.6 96.4 49.9 136.8 76.2 REMARK 620 8 GDP D 653 O2B 70.5 93.8 91.7 88.3 98.4 53.3 39.0 REMARK 620 9 HOH D 656 O 104.8 85.0 89.5 86.9 86.4 129.2 136.0 175.0 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ALF A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ALF B 611 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 612 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K B 613 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ALF C 621 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 622 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K C 623 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ALF D 631 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 632 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K D 633 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SE D 642 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 650 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP B 651 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP C 652 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP D 653 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1XZP RELATED DB: PDB REMARK 900 STRUCTURE OF THE GTP-BINDING PROTEIN TRME FROM THERMOTOGA MARITIMA REMARK 900 RELATED ID: 1XZQ RELATED DB: PDB REMARK 900 STRUCTURE OF THE GTP-BINDING PROTEIN TRME FROM THERMOTOGA MARITIMA REMARK 900 COMPLEXED WITH 5-FORMYL-THF REMARK 900 RELATED ID: 1RFL RELATED DB: PDB REMARK 900 NMR DATA DRIVEN STRUCTURAL MODEL OF G-DOMAIN OF MNME PROTEIN REMARK 900 RELATED ID: 2GJ9 RELATED DB: PDB REMARK 900 RELATED ID: 2GJA RELATED DB: PDB DBREF 2GJ8 A 216 384 UNP P25522 TRME_ECOLI 216 384 DBREF 2GJ8 B 216 384 UNP P25522 TRME_ECOLI 216 384 DBREF 2GJ8 C 216 384 UNP P25522 TRME_ECOLI 216 384 DBREF 2GJ8 D 216 384 UNP P25522 TRME_ECOLI 216 384 SEQADV 2GJ8 GLY A 213 UNP P25522 CLONING ARTIFACT SEQADV 2GJ8 SER A 214 UNP P25522 CLONING ARTIFACT SEQADV 2GJ8 HIS A 215 UNP P25522 CLONING ARTIFACT SEQADV 2GJ8 MSE A 217 UNP P25522 MET 217 MODIFIED RESIDUE SEQADV 2GJ8 MSE A 264 UNP P25522 MET 264 MODIFIED RESIDUE SEQADV 2GJ8 MSE A 302 UNP P25522 MET 302 MODIFIED RESIDUE SEQADV 2GJ8 MSE A 346 UNP P25522 MET 346 MODIFIED RESIDUE SEQADV 2GJ8 MSE A 376 UNP P25522 MET 376 MODIFIED RESIDUE SEQADV 2GJ8 MSE A 382 UNP P25522 MET 382 MODIFIED RESIDUE SEQADV 2GJ8 GLY B 213 UNP P25522 CLONING ARTIFACT SEQADV 2GJ8 SER B 214 UNP P25522 CLONING ARTIFACT SEQADV 2GJ8 HIS B 215 UNP P25522 CLONING ARTIFACT SEQADV 2GJ8 MSE B 217 UNP P25522 MET 217 MODIFIED RESIDUE SEQADV 2GJ8 MSE B 264 UNP P25522 MET 264 MODIFIED RESIDUE SEQADV 2GJ8 MSE B 302 UNP P25522 MET 302 MODIFIED RESIDUE SEQADV 2GJ8 MSE B 346 UNP P25522 MET 346 MODIFIED RESIDUE SEQADV 2GJ8 MSE B 376 UNP P25522 MET 376 MODIFIED RESIDUE SEQADV 2GJ8 MSE B 382 UNP P25522 MET 382 MODIFIED RESIDUE SEQADV 2GJ8 GLY C 213 UNP P25522 CLONING ARTIFACT SEQADV 2GJ8 SER C 214 UNP P25522 CLONING ARTIFACT SEQADV 2GJ8 HIS C 215 UNP P25522 CLONING ARTIFACT SEQADV 2GJ8 MSE C 217 UNP P25522 MET 217 MODIFIED RESIDUE SEQADV 2GJ8 MSE C 264 UNP P25522 MET 264 MODIFIED RESIDUE SEQADV 2GJ8 MSE C 302 UNP P25522 MET 302 MODIFIED RESIDUE SEQADV 2GJ8 MSE C 346 UNP P25522 MET 346 MODIFIED RESIDUE SEQADV 2GJ8 MSE C 376 UNP P25522 MET 376 MODIFIED RESIDUE SEQADV 2GJ8 MSE C 382 UNP P25522 MET 382 MODIFIED RESIDUE SEQADV 2GJ8 GLY D 213 UNP P25522 CLONING ARTIFACT SEQADV 2GJ8 SER D 214 UNP P25522 CLONING ARTIFACT SEQADV 2GJ8 HIS D 215 UNP P25522 CLONING ARTIFACT SEQADV 2GJ8 MSE D 217 UNP P25522 MET 217 MODIFIED RESIDUE SEQADV 2GJ8 MSE D 264 UNP P25522 MET 264 MODIFIED RESIDUE SEQADV 2GJ8 MSE D 302 UNP P25522 MET 302 MODIFIED RESIDUE SEQADV 2GJ8 MSE D 346 UNP P25522 MET 346 MODIFIED RESIDUE SEQADV 2GJ8 MSE D 376 UNP P25522 MET 376 MODIFIED RESIDUE SEQADV 2GJ8 MSE D 382 UNP P25522 MET 382 MODIFIED RESIDUE SEQRES 1 A 172 GLY SER HIS GLY MSE LYS VAL VAL ILE ALA GLY ARG PRO SEQRES 2 A 172 ASN ALA GLY LYS SER SER LEU LEU ASN ALA LEU ALA GLY SEQRES 3 A 172 ARG GLU ALA ALA ILE VAL THR ASP ILE ALA GLY THR THR SEQRES 4 A 172 ARG ASP VAL LEU ARG GLU HIS ILE HIS ILE ASP GLY MSE SEQRES 5 A 172 PRO LEU HIS ILE ILE ASP THR ALA GLY LEU ARG GLU ALA SEQRES 6 A 172 SER ASP GLU VAL GLU ARG ILE GLY ILE GLU ARG ALA TRP SEQRES 7 A 172 GLN GLU ILE GLU GLN ALA ASP ARG VAL LEU PHE MSE VAL SEQRES 8 A 172 ASP GLY THR THR THR ASP ALA VAL ASP PRO ALA GLU ILE SEQRES 9 A 172 TRP PRO GLU PHE ILE ALA ARG LEU PRO ALA LYS LEU PRO SEQRES 10 A 172 ILE THR VAL VAL ARG ASN LYS ALA ASP ILE THR GLY GLU SEQRES 11 A 172 THR LEU GLY MSE SER GLU VAL ASN GLY HIS ALA LEU ILE SEQRES 12 A 172 ARG LEU SER ALA ARG THR GLY GLU GLY VAL ASP VAL LEU SEQRES 13 A 172 ARG ASN HIS LEU LYS GLN SER MSE GLY PHE ASP THR ASN SEQRES 14 A 172 MSE GLU GLY SEQRES 1 B 172 GLY SER HIS GLY MSE LYS VAL VAL ILE ALA GLY ARG PRO SEQRES 2 B 172 ASN ALA GLY LYS SER SER LEU LEU ASN ALA LEU ALA GLY SEQRES 3 B 172 ARG GLU ALA ALA ILE VAL THR ASP ILE ALA GLY THR THR SEQRES 4 B 172 ARG ASP VAL LEU ARG GLU HIS ILE HIS ILE ASP GLY MSE SEQRES 5 B 172 PRO LEU HIS ILE ILE ASP THR ALA GLY LEU ARG GLU ALA SEQRES 6 B 172 SER ASP GLU VAL GLU ARG ILE GLY ILE GLU ARG ALA TRP SEQRES 7 B 172 GLN GLU ILE GLU GLN ALA ASP ARG VAL LEU PHE MSE VAL SEQRES 8 B 172 ASP GLY THR THR THR ASP ALA VAL ASP PRO ALA GLU ILE SEQRES 9 B 172 TRP PRO GLU PHE ILE ALA ARG LEU PRO ALA LYS LEU PRO SEQRES 10 B 172 ILE THR VAL VAL ARG ASN LYS ALA ASP ILE THR GLY GLU SEQRES 11 B 172 THR LEU GLY MSE SER GLU VAL ASN GLY HIS ALA LEU ILE SEQRES 12 B 172 ARG LEU SER ALA ARG THR GLY GLU GLY VAL ASP VAL LEU SEQRES 13 B 172 ARG ASN HIS LEU LYS GLN SER MSE GLY PHE ASP THR ASN SEQRES 14 B 172 MSE GLU GLY SEQRES 1 C 172 GLY SER HIS GLY MSE LYS VAL VAL ILE ALA GLY ARG PRO SEQRES 2 C 172 ASN ALA GLY LYS SER SER LEU LEU ASN ALA LEU ALA GLY SEQRES 3 C 172 ARG GLU ALA ALA ILE VAL THR ASP ILE ALA GLY THR THR SEQRES 4 C 172 ARG ASP VAL LEU ARG GLU HIS ILE HIS ILE ASP GLY MSE SEQRES 5 C 172 PRO LEU HIS ILE ILE ASP THR ALA GLY LEU ARG GLU ALA SEQRES 6 C 172 SER ASP GLU VAL GLU ARG ILE GLY ILE GLU ARG ALA TRP SEQRES 7 C 172 GLN GLU ILE GLU GLN ALA ASP ARG VAL LEU PHE MSE VAL SEQRES 8 C 172 ASP GLY THR THR THR ASP ALA VAL ASP PRO ALA GLU ILE SEQRES 9 C 172 TRP PRO GLU PHE ILE ALA ARG LEU PRO ALA LYS LEU PRO SEQRES 10 C 172 ILE THR VAL VAL ARG ASN LYS ALA ASP ILE THR GLY GLU SEQRES 11 C 172 THR LEU GLY MSE SER GLU VAL ASN GLY HIS ALA LEU ILE SEQRES 12 C 172 ARG LEU SER ALA ARG THR GLY GLU GLY VAL ASP VAL LEU SEQRES 13 C 172 ARG ASN HIS LEU LYS GLN SER MSE GLY PHE ASP THR ASN SEQRES 14 C 172 MSE GLU GLY SEQRES 1 D 172 GLY SER HIS GLY MSE LYS VAL VAL ILE ALA GLY ARG PRO SEQRES 2 D 172 ASN ALA GLY LYS SER SER LEU LEU ASN ALA LEU ALA GLY SEQRES 3 D 172 ARG GLU ALA ALA ILE VAL THR ASP ILE ALA GLY THR THR SEQRES 4 D 172 ARG ASP VAL LEU ARG GLU HIS ILE HIS ILE ASP GLY MSE SEQRES 5 D 172 PRO LEU HIS ILE ILE ASP THR ALA GLY LEU ARG GLU ALA SEQRES 6 D 172 SER ASP GLU VAL GLU ARG ILE GLY ILE GLU ARG ALA TRP SEQRES 7 D 172 GLN GLU ILE GLU GLN ALA ASP ARG VAL LEU PHE MSE VAL SEQRES 8 D 172 ASP GLY THR THR THR ASP ALA VAL ASP PRO ALA GLU ILE SEQRES 9 D 172 TRP PRO GLU PHE ILE ALA ARG LEU PRO ALA LYS LEU PRO SEQRES 10 D 172 ILE THR VAL VAL ARG ASN LYS ALA ASP ILE THR GLY GLU SEQRES 11 D 172 THR LEU GLY MSE SER GLU VAL ASN GLY HIS ALA LEU ILE SEQRES 12 D 172 ARG LEU SER ALA ARG THR GLY GLU GLY VAL ASP VAL LEU SEQRES 13 D 172 ARG ASN HIS LEU LYS GLN SER MSE GLY PHE ASP THR ASN SEQRES 14 D 172 MSE GLU GLY MODRES 2GJ8 MSE A 217 MET SELENOMETHIONINE MODRES 2GJ8 MSE A 264 MET SELENOMETHIONINE MODRES 2GJ8 MSE A 302 MET SELENOMETHIONINE MODRES 2GJ8 MSE A 346 MET SELENOMETHIONINE MODRES 2GJ8 MSE A 376 MET SELENOMETHIONINE MODRES 2GJ8 MSE B 217 MET SELENOMETHIONINE MODRES 2GJ8 MSE B 264 MET SELENOMETHIONINE MODRES 2GJ8 MSE B 302 MET SELENOMETHIONINE MODRES 2GJ8 MSE B 346 MET SELENOMETHIONINE MODRES 2GJ8 MSE B 376 MET SELENOMETHIONINE MODRES 2GJ8 MSE C 217 MET SELENOMETHIONINE MODRES 2GJ8 MSE C 264 MET SELENOMETHIONINE MODRES 2GJ8 MSE C 302 MET SELENOMETHIONINE MODRES 2GJ8 MSE C 346 MET SELENOMETHIONINE MODRES 2GJ8 MSE C 376 MET SELENOMETHIONINE MODRES 2GJ8 MSE D 217 MET SELENOMETHIONINE MODRES 2GJ8 MSE D 264 MET SELENOMETHIONINE MODRES 2GJ8 MSE D 302 MET SELENOMETHIONINE MODRES 2GJ8 MSE D 346 MET SELENOMETHIONINE MODRES 2GJ8 MSE D 376 MET SELENOMETHIONINE MODRES 2GJ8 MSE D 382 MET SELENOMETHIONINE HET MSE A 217 8 HET MSE A 264 8 HET MSE A 302 8 HET MSE A 346 8 HET MSE A 376 8 HET MSE B 217 8 HET MSE B 264 8 HET MSE B 302 8 HET MSE B 346 8 HET MSE B 376 8 HET MSE C 217 8 HET MSE C 264 8 HET MSE C 302 8 HET MSE C 346 8 HET MSE C 376 8 HET MSE D 217 8 HET MSE D 264 8 HET MSE D 302 8 HET MSE D 346 8 HET MSE D 376 8 HET MSE D 382 8 HET ALF A 601 5 HET MG A 602 1 HET K A 603 1 HET SE A 641 1 HET GDP A 650 28 HET ALF B 611 5 HET MG B 612 1 HET K B 613 1 HET GDP B 651 28 HET ALF C 621 5 HET MG C 622 1 HET K C 623 1 HET SE C 643 1 HET GDP C 652 28 HET ALF D 631 5 HET MG D 632 1 HET K D 633 1 HET SE D 642 1 HET GDP D 653 28 HETNAM MSE SELENOMETHIONINE HETNAM ALF TETRAFLUOROALUMINATE ION HETNAM MG MAGNESIUM ION HETNAM K POTASSIUM ION HETNAM SE SELENIUM ATOM HETNAM GDP GUANOSINE-5'-DIPHOSPHATE FORMUL 1 MSE 21(C5 H11 N O2 SE) FORMUL 5 ALF 4(AL F4 1-) FORMUL 6 MG 4(MG 2+) FORMUL 7 K 4(K 1+) FORMUL 8 SE 3(SE) FORMUL 9 GDP 4(C10 H15 N5 O11 P2) FORMUL 24 HOH *585(H2 O) HELIX 1 1 GLY A 228 GLY A 238 1 11 HELIX 2 2 ASP A 279 GLN A 295 1 17 HELIX 3 3 ASP A 312 TRP A 317 1 6 HELIX 4 4 TRP A 317 LEU A 324 1 8 HELIX 5 5 LYS A 336 GLY A 341 1 6 HELIX 6 6 GLY A 364 MSE A 376 1 13 HELIX 7 7 GLY B 228 GLY B 238 1 11 HELIX 8 8 ASP B 279 ALA B 296 1 18 HELIX 9 9 ASP B 312 TRP B 317 1 6 HELIX 10 10 TRP B 317 LEU B 324 1 8 HELIX 11 11 LYS B 336 GLY B 341 1 6 HELIX 12 12 GLY B 364 MSE B 376 1 13 HELIX 13 13 GLY C 228 GLY C 238 1 11 HELIX 14 14 ASP C 279 ALA C 296 1 18 HELIX 15 15 ASP C 312 TRP C 317 1 6 HELIX 16 16 TRP C 317 ARG C 323 1 7 HELIX 17 17 LYS C 336 GLY C 341 1 6 HELIX 18 18 GLY C 364 MSE C 376 1 13 HELIX 19 19 GLY D 228 GLY D 238 1 11 HELIX 20 20 ASP D 279 ALA D 296 1 18 HELIX 21 21 ASP D 312 TRP D 317 1 6 HELIX 22 22 TRP D 317 LEU D 324 1 8 HELIX 23 23 LYS D 336 GLY D 341 1 6 HELIX 24 24 GLY D 364 GLY D 377 1 14 SHEET 1 A 7 LEU A 255 ILE A 261 0 SHEET 2 A 7 MSE A 264 ASP A 270 -1 O ILE A 268 N GLU A 257 SHEET 3 A 7 MSE A 217 GLY A 223 1 N ILE A 221 O ILE A 269 SHEET 4 A 7 ARG A 298 ASP A 304 1 O MSE A 302 N ALA A 222 SHEET 5 A 7 ILE A 330 ASN A 335 1 O VAL A 333 N VAL A 303 SHEET 6 A 7 HIS A 352 ARG A 356 1 O ALA A 353 N VAL A 332 SHEET 7 A 7 GLY A 345 VAL A 349 -1 N SER A 347 O LEU A 354 SHEET 1 B 7 LEU B 255 HIS B 260 0 SHEET 2 B 7 PRO B 265 ASP B 270 -1 O ILE B 268 N GLU B 257 SHEET 3 B 7 LYS B 218 GLY B 223 1 N ILE B 221 O ILE B 269 SHEET 4 B 7 ARG B 298 ASP B 304 1 O LEU B 300 N VAL B 220 SHEET 5 B 7 ILE B 330 ASN B 335 1 O VAL B 333 N VAL B 303 SHEET 6 B 7 HIS B 352 ARG B 356 1 O ALA B 353 N VAL B 332 SHEET 7 B 7 GLY B 345 VAL B 349 -1 N VAL B 349 O HIS B 352 SHEET 1 C 7 LEU C 255 ILE C 261 0 SHEET 2 C 7 MSE C 264 ASP C 270 -1 O ILE C 268 N GLU C 257 SHEET 3 C 7 MSE C 217 ALA C 222 1 N ILE C 221 O ILE C 269 SHEET 4 C 7 ARG C 298 ASP C 304 1 O MSE C 302 N ALA C 222 SHEET 5 C 7 ILE C 330 ASN C 335 1 O THR C 331 N VAL C 299 SHEET 6 C 7 HIS C 352 ARG C 356 1 O ILE C 355 N VAL C 332 SHEET 7 C 7 GLY C 345 VAL C 349 -1 N SER C 347 O LEU C 354 SHEET 1 D 7 LEU D 255 ILE D 261 0 SHEET 2 D 7 MSE D 264 ASP D 270 -1 O ASP D 270 N LEU D 255 SHEET 3 D 7 LYS D 218 GLY D 223 1 N VAL D 219 O HIS D 267 SHEET 4 D 7 ARG D 298 ASP D 304 1 O MSE D 302 N ALA D 222 SHEET 5 D 7 ILE D 330 ASN D 335 1 O ASN D 335 N VAL D 303 SHEET 6 D 7 LEU D 354 ARG D 356 1 O ILE D 355 N ARG D 334 SHEET 7 D 7 GLY D 345 SER D 347 -1 N SER D 347 O LEU D 354 LINK C GLY A 216 N MSE A 217 1555 1555 1.33 LINK C MSE A 217 N LYS A 218 1555 1555 1.33 LINK C GLY A 263 N MSE A 264 1555 1555 1.33 LINK C MSE A 264 N PRO A 265 1555 1555 1.35 LINK C PHE A 301 N MSE A 302 1555 1555 1.32 LINK C MSE A 302 N VAL A 303 1555 1555 1.33 LINK C GLY A 345 N MSE A 346 1555 1555 1.33 LINK C MSE A 346 N SER A 347 1555 1555 1.34 LINK C SER A 375 N MSE A 376 1555 1555 1.33 LINK C MSE B 217 N LYS B 218 1555 1555 1.33 LINK C GLY B 263 N MSE B 264 1555 1555 1.34 LINK C MSE B 264 N PRO B 265 1555 1555 1.34 LINK C PHE B 301 N MSE B 302 1555 1555 1.35 LINK C MSE B 302 N VAL B 303 1555 1555 1.34 LINK C GLY B 345 N MSE B 346 1555 1555 1.33 LINK C MSE B 346 N SER B 347 1555 1555 1.33 LINK C SER B 375 N MSE B 376 1555 1555 1.33 LINK C GLY C 216 N MSE C 217 1555 1555 1.34 LINK C MSE C 217 N LYS C 218 1555 1555 1.35 LINK C GLY C 263 N MSE C 264 1555 1555 1.34 LINK C MSE C 264 N PRO C 265 1555 1555 1.35 LINK C PHE C 301 N MSE C 302 1555 1555 1.33 LINK C MSE C 302 N VAL C 303 1555 1555 1.33 LINK C GLY C 345 N MSE C 346 1555 1555 1.33 LINK C MSE C 346 N SER C 347 1555 1555 1.33 LINK C SER C 375 N MSE C 376 1555 1555 1.33 LINK C GLY D 216 N MSE D 217 1555 1555 1.33 LINK C MSE D 217 N LYS D 218 1555 1555 1.32 LINK C GLY D 263 N MSE D 264 1555 1555 1.34 LINK C MSE D 264 N PRO D 265 1555 1555 1.34 LINK C PHE D 301 N MSE D 302 1555 1555 1.33 LINK C MSE D 302 N VAL D 303 1555 1555 1.34 LINK C GLY D 345 N MSE D 346 1555 1555 1.33 LINK C MSE D 346 N SER D 347 1555 1555 1.33 LINK C SER D 375 N MSE D 376 1555 1555 1.33 LINK C MSE D 376 N GLY D 377 1555 1555 1.32 LINK C ASN D 381 N MSE D 382 1555 1555 1.34 LINK C MSE D 382 N GLU D 383 1555 1555 1.33 LINK OD1 ASN A 226 K K A 603 1555 1555 2.66 LINK OG SER A 230 MG MG A 602 1555 1555 2.01 LINK O THR A 245 K K A 603 1555 1555 2.86 LINK O ILE A 247 K K A 603 1555 1555 2.75 LINK OG1 THR A 250 K K A 603 1555 1555 3.35 LINK OG1 THR A 251 MG MG A 602 1555 1555 2.16 LINK F3 ALF A 601 MG MG A 602 1555 1555 1.91 LINK AL ALF A 601 MG MG A 602 1555 1555 3.52 LINK AL ALF A 601 K K A 603 1555 1555 3.69 LINK F2 ALF A 601 K K A 603 1555 1555 2.58 LINK AL ALF A 601 O2B GDP A 650 1555 1555 1.98 LINK AL ALF A 601 O3B GDP A 650 1555 1555 3.57 LINK AL ALF A 601 O HOH A 652 1555 1555 2.10 LINK MG MG A 602 O3B GDP A 650 1555 1555 1.98 LINK MG MG A 602 O HOH A 654 1555 1555 2.28 LINK MG MG A 602 O HOH A 655 1555 1555 2.19 LINK K K A 603 O2A GDP A 650 1555 1555 2.79 LINK K K A 603 O2B GDP A 650 1555 1555 2.99 LINK K K A 603 O HOH A 654 1555 1555 3.63 LINK OD1 ASN B 226 K K B 613 1555 1555 2.66 LINK OG SER B 230 MG MG B 612 1555 1555 2.15 LINK O THR B 245 K K B 613 1555 1555 2.82 LINK O ILE B 247 K K B 613 1555 1555 2.91 LINK OG1 THR B 250 K K B 613 1555 1555 3.36 LINK OG1 THR B 251 MG MG B 612 1555 1555 2.15 LINK F1 ALF B 611 MG MG B 612 1555 1555 1.80 LINK AL ALF B 611 MG MG B 612 1555 1555 3.34 LINK AL ALF B 611 K K B 613 1555 1555 3.60 LINK F4 ALF B 611 K K B 613 1555 1555 2.47 LINK F2 ALF B 611 K K B 613 1555 1555 3.62 LINK AL ALF B 611 O2B GDP B 651 1555 1555 2.00 LINK AL ALF B 611 O3B GDP B 651 1555 1555 3.62 LINK AL ALF B 611 O HOH B 653 1555 1555 2.07 LINK MG MG B 612 O3B GDP B 651 1555 1555 2.03 LINK MG MG B 612 O HOH B 654 1555 1555 2.22 LINK MG MG B 612 O HOH B 655 1555 1555 2.11 LINK K K B 613 O2A GDP B 651 1555 1555 2.72 LINK K K B 613 O3A GDP B 651 1555 1555 3.56 LINK K K B 613 O2B GDP B 651 1555 1555 2.91 LINK K K B 613 O HOH B 655 1555 1555 3.69 LINK OD1 ASN C 226 K K C 623 1555 1555 2.70 LINK OG SER C 230 MG MG C 622 1555 1555 2.09 LINK O THR C 245 K K C 623 1555 1555 2.79 LINK O ILE C 247 K K C 623 1555 1555 2.88 LINK OG1 THR C 250 K K C 623 1555 1555 3.30 LINK OG1 THR C 251 MG MG C 622 1555 1555 2.02 LINK AL ALF C 621 MG MG C 622 1555 1555 3.58 LINK F1 ALF C 621 MG MG C 622 1555 1555 1.93 LINK AL ALF C 621 K K C 623 1555 1555 3.60 LINK F2 ALF C 621 K K C 623 1555 1555 3.68 LINK F4 ALF C 621 K K C 623 1555 1555 2.60 LINK AL ALF C 621 O3B GDP C 652 1555 1555 1.92 LINK AL ALF C 621 O1B GDP C 652 1555 1555 3.71 LINK AL ALF C 621 O HOH C 656 1555 1555 2.01 LINK MG MG C 622 O1B GDP C 652 1555 1555 1.99 LINK MG MG C 622 O HOH C 653 1555 1555 2.08 LINK MG MG C 622 O HOH C 654 1555 1555 2.21 LINK K K C 623 O2A GDP C 652 1555 1555 2.93 LINK K K C 623 O3A GDP C 652 1555 1555 3.70 LINK K K C 623 O3B GDP C 652 1555 1555 2.98 LINK OD1 ASN D 226 K K D 633 1555 1555 2.69 LINK OG SER D 230 MG MG D 632 1555 1555 2.02 LINK O THR D 245 K K D 633 1555 1555 2.75 LINK O ILE D 247 K K D 633 1555 1555 2.83 LINK OG1 THR D 250 K K D 633 1555 1555 3.31 LINK OG1 THR D 251 MG MG D 632 1555 1555 1.98 LINK AL ALF D 631 MG MG D 632 1555 1555 3.60 LINK F3 ALF D 631 MG MG D 632 1555 1555 1.97 LINK AL ALF D 631 K K D 633 1555 1555 3.58 LINK F2 ALF D 631 K K D 633 1555 1555 2.55 LINK AL ALF D 631 O3B GDP D 653 1555 1555 3.66 LINK AL ALF D 631 O2B GDP D 653 1555 1555 1.88 LINK AL ALF D 631 O HOH D 656 1555 1555 2.07 LINK MG MG D 632 O3B GDP D 653 1555 1555 2.08 LINK MG MG D 632 O HOH D 657 1555 1555 2.06 LINK MG MG D 632 O HOH D 658 1555 1555 2.14 LINK K K D 633 O2A GDP D 653 1555 1555 2.94 LINK K K D 633 O2B GDP D 653 1555 1555 2.88 LINK K K D 633 O3A GDP D 653 1555 1555 3.62 SITE 1 AC1 14 PRO A 225 ASN A 226 LYS A 229 ILE A 247 SITE 2 AC1 14 ALA A 248 GLY A 249 THR A 250 THR A 251 SITE 3 AC1 14 GLY A 273 MG A 602 K A 603 GDP A 650 SITE 4 AC1 14 HOH A 652 HOH A 655 SITE 1 AC2 6 SER A 230 THR A 251 ALF A 601 GDP A 650 SITE 2 AC2 6 HOH A 654 HOH A 655 SITE 1 AC3 6 ASN A 226 THR A 245 ILE A 247 THR A 250 SITE 2 AC3 6 ALF A 601 GDP A 650 SITE 1 AC4 15 PRO B 225 ASN B 226 LYS B 229 ILE B 247 SITE 2 AC4 15 ALA B 248 GLY B 249 THR B 250 THR B 251 SITE 3 AC4 15 GLY B 273 MG B 612 K B 613 GDP B 651 SITE 4 AC4 15 HOH B 653 HOH B 654 HOH B 655 SITE 1 AC5 6 SER B 230 THR B 251 ALF B 611 GDP B 651 SITE 2 AC5 6 HOH B 654 HOH B 655 SITE 1 AC6 6 ASN B 226 THR B 245 ILE B 247 THR B 250 SITE 2 AC6 6 ALF B 611 GDP B 651 SITE 1 AC7 15 PRO C 225 ASN C 226 LYS C 229 ILE C 247 SITE 2 AC7 15 ALA C 248 GLY C 249 THR C 250 THR C 251 SITE 3 AC7 15 GLY C 273 MG C 622 K C 623 GDP C 652 SITE 4 AC7 15 HOH C 653 HOH C 654 HOH C 656 SITE 1 AC8 6 SER C 230 THR C 251 ALF C 621 GDP C 652 SITE 2 AC8 6 HOH C 653 HOH C 654 SITE 1 AC9 6 ASN C 226 THR C 245 ILE C 247 THR C 250 SITE 2 AC9 6 ALF C 621 GDP C 652 SITE 1 BC1 15 PRO D 225 ASN D 226 LYS D 229 ILE D 247 SITE 2 BC1 15 ALA D 248 GLY D 249 THR D 250 THR D 251 SITE 3 BC1 15 GLY D 273 MG D 632 K D 633 GDP D 653 SITE 4 BC1 15 HOH D 656 HOH D 657 HOH D 658 SITE 1 BC2 6 SER D 230 THR D 251 ALF D 631 GDP D 653 SITE 2 BC2 6 HOH D 657 HOH D 658 SITE 1 BC3 6 ASN D 226 THR D 245 ILE D 247 THR D 250 SITE 2 BC3 6 ALF D 631 GDP D 653 SITE 1 BC4 1 HIS D 215 SITE 1 BC5 25 ASN A 226 ALA A 227 GLY A 228 LYS A 229 SITE 2 BC5 25 SER A 230 SER A 231 VAL A 244 THR A 245 SITE 3 BC5 25 ASP A 246 ASN A 335 LYS A 336 ASP A 338 SITE 4 BC5 25 ILE A 339 SER A 358 ALA A 359 ARG A 360 SITE 5 BC5 25 ALF A 601 MG A 602 K A 603 HOH A 654 SITE 6 BC5 25 HOH A 655 HOH A 664 HOH A 673 HOH A 688 SITE 7 BC5 25 HOH A 706 SITE 1 BC6 22 ASN B 226 ALA B 227 GLY B 228 LYS B 229 SITE 2 BC6 22 SER B 230 SER B 231 THR B 245 ASP B 246 SITE 3 BC6 22 ASN B 335 LYS B 336 ASP B 338 ILE B 339 SITE 4 BC6 22 SER B 358 ALA B 359 ARG B 360 ALF B 611 SITE 5 BC6 22 MG B 612 K B 613 HOH B 654 HOH B 655 SITE 6 BC6 22 HOH B 721 HOH B 727 SITE 1 BC7 25 ASN C 226 ALA C 227 GLY C 228 LYS C 229 SITE 2 BC7 25 SER C 230 SER C 231 THR C 245 ASP C 246 SITE 3 BC7 25 ASN C 335 LYS C 336 ASP C 338 ILE C 339 SITE 4 BC7 25 SER C 358 ALA C 359 ARG C 360 ALF C 621 SITE 5 BC7 25 MG C 622 K C 623 HOH C 653 HOH C 654 SITE 6 BC7 25 HOH C 660 HOH C 699 HOH C 725 HOH C 731 SITE 7 BC7 25 HOH C 767 SITE 1 BC8 25 ASN D 226 ALA D 227 GLY D 228 LYS D 229 SITE 2 BC8 25 SER D 230 SER D 231 VAL D 244 THR D 245 SITE 3 BC8 25 ASP D 246 ASN D 335 LYS D 336 ASP D 338 SITE 4 BC8 25 ILE D 339 SER D 358 ALA D 359 ARG D 360 SITE 5 BC8 25 ALF D 631 MG D 632 K D 633 HOH D 657 SITE 6 BC8 25 HOH D 658 HOH D 681 HOH D 695 HOH D 712 SITE 7 BC8 25 HOH D 727 CRYST1 57.540 70.227 91.300 90.00 95.51 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017379 0.000000 0.001676 0.00000 SCALE2 0.000000 0.014240 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011004 0.00000