HEADER HORMONE/GROWTH FACTOR 04-APR-06 2GLH TITLE SOLUTION CONFORMATION OF SALMON CALCITONIN IN SODIUM DODECYL SULFATE TITLE 2 MICELLES COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALCITONIN-1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: PEPTIDE SYNTHESIS KEYWDS A-HELIX, HORMONE-GROWTH FACTOR COMPLEX EXPDTA SOLUTION NMR NUMMDL 100 AUTHOR G.ANDREOTTI,B.LOPEZ-MENDEZ,P.AMODEO,M.A.MORELLI,H.NAKAMUTA,A.MOTTA REVDAT 4 09-MAR-22 2GLH 1 REMARK LINK REVDAT 3 24-FEB-09 2GLH 1 VERSN REVDAT 2 05-SEP-06 2GLH 1 JRNL REVDAT 1 20-JUN-06 2GLH 0 JRNL AUTH G.ANDREOTTI,B.L.MENDEZ,P.AMODEO,M.A.MORELLI,H.NAKAMUTA, JRNL AUTH 2 A.MOTTA JRNL TITL STRUCTURAL DETERMINANTS OF SALMON CALCITONIN BIOACTIVITY: JRNL TITL 2 THE ROLE OF THE LEU-BASED AMPHIPATHIC ALPHA-HELIX. JRNL REF J.BIOL.CHEM. V. 281 24193 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 16766525 JRNL DOI 10.1074/JBC.M603528200 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.AMODEO,A.MOTTA,G.STRAZZULLO,M.A.CASTIGLIONE-MORELLI REMARK 1 TITL CONFORMATIONAL FLEXIBILITY IN CALCITONIN: THE DYNAMIC REMARK 1 TITL 2 PROPERTIES OF HUMAN AND SALMON CALCITONIN IN SOLUTION REMARK 1 REF J.BIOMOL.NMR V. 13 161 1999 REMARK 1 REFN ISSN 0925-2738 REMARK 1 DOI 10.1023/A:1008365322148 REMARK 1 REFERENCE 2 REMARK 1 AUTH A.MOTTA,A.PASTORE,N.A.GOUD,M.A.CASTIGLIONE-MORELLI REMARK 1 TITL SOLUTION CONFORMATION OF SALMON CALCITONIN IN SODIUM DODECYL REMARK 1 TITL 2 SULFATE MICELLES AS DETERMINED BY TWO-DIMENSIONAL NMR AND REMARK 1 TITL 3 DISTANCE GEOMETRY CALCULATIONS REMARK 1 REF BIOCHEMISTRY V. 30 10444 1991 REMARK 1 REFN ISSN 0006-2960 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR, AMBER 6.0 REMARK 3 AUTHORS : REMARK 3 PEARLMAN,CASE,CALDWELL,ROSS,CHEATHAM,FERGUSON,SEIBEL,SINGH, REMARK 3 WEINER,KOLLMAN (AMBER) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2GLH COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000037266. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310; 310 REMARK 210 PH : 4.1; 7.2 REMARK 210 IONIC STRENGTH : NULL; NULL REMARK 210 PRESSURE : AMBIENT; AMBIENT REMARK 210 SAMPLE CONTENTS : 5 MM SCT; 20 MM PHOSPHATE REMARK 210 BUFFER; 600 MM SDS; 95% H2O, 5% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; 2D TOCSY; DQF-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : AURELIA, AMBER 6.0 REMARK 210 METHOD USED : RESTRAINED SIMULATED REMARK 210 ANNEALING/ENERGY MINIMIZATION REMARK 210 FOLLOWED BY UNRESTRAINED REMARK 210 MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 100 REMARK 210 CONFORMERS, SELECTION CRITERIA : PERIODICALLY SAMPLED REMARK 210 UNRESTRAINED MOLECULAR DYNAMICS REMARK 210 STRUCTURES REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 7 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 8 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 13 TYR A 22 CB - CG - CD2 ANGL. DEV. = -3.7 DEGREES REMARK 500 14 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 18 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 19 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 20 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 21 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 41 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 44 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 45 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 46 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 54 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 67 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 78 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 85 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 87 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 93 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 00 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 -75.84 -118.03 REMARK 500 1 LEU A 4 -76.91 -32.76 REMARK 500 1 THR A 25 113.75 166.70 REMARK 500 1 SER A 29 48.13 -154.05 REMARK 500 2 LEU A 4 -73.76 -38.23 REMARK 500 2 THR A 25 132.46 149.83 REMARK 500 2 SER A 29 18.69 -61.80 REMARK 500 4 ASN A 26 -30.60 -147.39 REMARK 500 5 SER A 2 -60.31 -100.38 REMARK 500 5 PRO A 23 3.79 -64.30 REMARK 500 5 THR A 25 143.14 -177.94 REMARK 500 5 ASN A 26 -45.39 -148.18 REMARK 500 6 SER A 2 -80.43 -99.73 REMARK 500 6 TYR A 22 -56.53 -29.67 REMARK 500 6 ASN A 26 -47.84 -149.48 REMARK 500 7 SER A 2 -77.56 -91.06 REMARK 500 7 TYR A 22 -70.14 -25.82 REMARK 500 7 PRO A 23 1.55 -60.80 REMARK 500 7 THR A 25 136.13 -171.16 REMARK 500 7 ASN A 26 -12.26 -141.90 REMARK 500 7 SER A 29 101.35 -59.33 REMARK 500 8 SER A 2 -79.78 -102.92 REMARK 500 8 TYR A 22 -69.83 -23.51 REMARK 500 8 PRO A 23 -7.44 -56.95 REMARK 500 8 THR A 25 146.50 -173.05 REMARK 500 8 ASN A 26 -44.69 -146.55 REMARK 500 9 LEU A 4 -77.11 -31.66 REMARK 500 9 TYR A 22 -65.32 -23.81 REMARK 500 9 ASN A 26 -14.23 -152.13 REMARK 500 9 THR A 27 -58.48 -134.13 REMARK 500 10 ASN A 26 -36.10 -149.68 REMARK 500 11 SER A 2 -95.57 -129.26 REMARK 500 11 THR A 25 110.54 -167.48 REMARK 500 11 THR A 27 -1.91 -149.85 REMARK 500 12 ARG A 24 -37.39 -137.06 REMARK 500 12 THR A 25 125.80 -178.17 REMARK 500 12 THR A 27 -41.52 -150.22 REMARK 500 13 ARG A 24 -37.85 -140.69 REMARK 500 13 THR A 25 98.87 172.55 REMARK 500 13 THR A 27 -60.25 -144.90 REMARK 500 14 SER A 2 -91.98 -111.21 REMARK 500 14 ARG A 24 -57.19 -125.36 REMARK 500 14 THR A 25 90.27 -171.44 REMARK 500 15 PRO A 23 4.54 -64.16 REMARK 500 15 ARG A 24 -35.14 -137.67 REMARK 500 15 THR A 25 98.63 155.31 REMARK 500 16 PRO A 23 7.06 -64.84 REMARK 500 16 ARG A 24 -37.14 -141.07 REMARK 500 16 THR A 25 98.45 163.21 REMARK 500 17 PRO A 23 0.19 -65.74 REMARK 500 REMARK 500 THIS ENTRY HAS 138 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 11 TYR A 22 0.07 SIDE CHAIN REMARK 500 31 TYR A 22 0.07 SIDE CHAIN REMARK 500 58 TYR A 22 0.07 SIDE CHAIN REMARK 500 66 TYR A 22 0.06 SIDE CHAIN REMARK 500 77 ARG A 24 0.09 SIDE CHAIN REMARK 500 95 ARG A 24 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH2 A 33 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2GLG RELATED DB: PDB REMARK 900 [L23,A24]-SALMON CALCITONIN MUTANT DBREF 2GLH A 1 32 UNP P01263 CALC1_ONCKE 83 114 SEQRES 1 A 33 CYS SER ASN LEU SER THR CYS VAL LEU GLY LYS LEU SER SEQRES 2 A 33 GLN GLU LEU HIS LYS LEU GLN THR TYR PRO ARG THR ASN SEQRES 3 A 33 THR GLY SER GLY THR PRO NH2 HET NH2 A 33 3 HETNAM NH2 AMINO GROUP FORMUL 1 NH2 H2 N HELIX 1 1 ASN A 3 TYR A 22 1 20 SSBOND 1 CYS A 1 CYS A 7 1555 1555 2.04 LINK C PRO A 32 N NH2 A 33 1555 1555 1.33 SITE 1 AC1 1 PRO A 32 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1