HEADER OXIDOREDUCTASE 05-APR-06 2GM6 OBSLTE 26-NOV-14 2GM6 4QMA TITLE CRYSTAL STRUCTURE OF A PUTATIVE CYSTEINE DIOXYGENASE TYPE I TITLE 2 (REUT_B5045) FROM RALSTONIA EUTROPHA JMP134 AT 1.84 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYSTEINE DIOXYGENASE TYPE I; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RALSTONIA EUTROPHA; SOURCE 3 ORGANISM_TAXID: 264198; SOURCE 4 STRAIN: JMP134; SOURCE 5 GENE: YP_299237.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS PUTATIVE CYSTEINE DIOXYGENASE TYPE I, STRUCTURAL GENOMICS, JOINT KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 PSI-2, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 26-NOV-14 2GM6 1 OBSLTE REVDAT 4 13-JUL-11 2GM6 1 VERSN REVDAT 3 28-JUL-10 2GM6 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 2GM6 1 VERSN REVDAT 1 13-JUN-06 2GM6 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF CYSTEINE DIOXYGENASE TYPE I JRNL TITL 2 (YP_299237.1) FROM RALSTONIA EUTROPHA JMP134 AT 1.84 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 31598 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1617 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.84 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.89 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2168 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.3000 REMARK 3 BIN FREE R VALUE SET COUNT : 112 REMARK 3 BIN FREE R VALUE : 0.3100 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1499 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 213 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.21000 REMARK 3 B22 (A**2) : 1.21000 REMARK 3 B33 (A**2) : -2.41000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.095 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.095 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.095 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.492 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1611 ; 0.016 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1453 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2199 ; 1.535 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3361 ; 0.857 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 203 ; 6.183 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 79 ;28.518 ;22.278 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 238 ;13.291 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;21.269 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 228 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1820 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 349 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 301 ; 0.192 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1487 ; 0.201 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 774 ; 0.174 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 947 ; 0.082 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 163 ; 0.181 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 5 ; 0.219 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 38 ; 0.199 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 10 ; 0.146 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1059 ; 2.056 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 395 ; 0.509 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1575 ; 2.752 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 699 ; 5.036 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 618 ; 6.926 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 11 A 500 REMARK 3 ORIGIN FOR THE GROUP (A): 36.8578 21.0436 37.3581 REMARK 3 T TENSOR REMARK 3 T11: -0.0329 T22: -0.0999 REMARK 3 T33: -0.0890 T12: 0.0631 REMARK 3 T13: -0.0486 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 0.6187 L22: 1.4197 REMARK 3 L33: 2.2399 L12: 0.1812 REMARK 3 L13: -0.1700 L23: -0.4519 REMARK 3 S TENSOR REMARK 3 S11: -0.1398 S12: -0.0111 S13: 0.0343 REMARK 3 S21: -0.1699 S22: 0.0531 S23: 0.1007 REMARK 3 S31: -0.1377 S32: -0.2329 S33: 0.0867 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 3. FE MODELED BASED ON ANOMALOUS DIFFERENCE MAP, REMARK 3 GEOMETRY, PROTEIN ENVIRONMENT, AND EXCITATION SCAN. 4. SO4 AND REMARK 3 EDO MODELED BASED ON CYRSTALLIZATION CONDITIONS. 5. UNMODELED REMARK 3 DENSITY NEAR RESIDUES 33, 37, AND 192. 6. ATOM RECORD CONTAINS REMARK 3 RESIDUAL B FACTORS ONLY. REMARK 4 REMARK 4 2GM6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-APR-06. REMARK 100 THE RCSB ID CODE IS RCSB037286. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-MAR-06; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SSRL; SSRL REMARK 200 BEAMLINE : BL9-2; BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000; 0.97925, 0.91837, REMARK 200 0.97882 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR; REMARK 200 NULL REMARK 200 OPTICS : FLAT COLLIMATING MIRROR, TOROID REMARK 200 FOCUSING MIRROR; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31669 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 29.579 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : 0.07100 REMARK 200 FOR THE DATA SET : 6.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.84 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.79400 REMARK 200 R SYM FOR SHELL (I) : 0.79400 REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.4M (NH4)2SO4, 0.1M TRIS, PH 8.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, NANODROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 108.39750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.58500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.58500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 54.19875 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.58500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.58500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 162.59625 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.58500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.58500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 54.19875 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.58500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.58500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 162.59625 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 108.39750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 507 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 GLU A 3 REMARK 465 SER A 4 REMARK 465 PRO A 5 REMARK 465 THR A 6 REMARK 465 ALA A 7 REMARK 465 GLY A 8 REMARK 465 ARG A 9 REMARK 465 ALA A 10 REMARK 465 ASP A 203 REMARK 465 SER A 204 REMARK 465 ALA A 205 REMARK 465 ALA A 206 REMARK 465 SER A 207 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 45 NE CZ NH1 NH2 REMARK 470 ARG A 49 CD NE CZ NH1 NH2 REMARK 470 LYS A 202 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 50 66.59 -100.40 REMARK 500 THR A 97 -3.90 73.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 500 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 147 NE2 REMARK 620 2 HOH A 695 O 93.3 REMARK 620 3 HIS A 96 NE2 85.4 174.8 REMARK 620 4 HIS A 94 NE2 90.7 86.7 98.3 REMARK 620 5 SO4 A 501 O1 169.6 97.0 84.4 88.9 REMARK 620 6 HOH A 539 O 95.1 86.6 88.6 171.4 86.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 506 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 361076 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE: REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV REMARK 999 PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE REMARK 999 TARGET SEQUENCE. DBREF 2GM6 A 1 207 GB 72122207 AAZ64393 1 207 SEQADV 2GM6 GLY A 0 GB 72122207 LEADER SEQUENCE SEQADV 2GM6 MSE A 1 GB 72122207 MET 1 MODIFIED RESIDUE SEQADV 2GM6 MSE A 68 GB 72122207 MET 68 MODIFIED RESIDUE SEQADV 2GM6 MSE A 104 GB 72122207 MET 104 MODIFIED RESIDUE SEQRES 1 A 208 GLY MSE SER GLU SER PRO THR ALA GLY ARG ALA SER LEU SEQRES 2 A 208 ALA PRO LEU ARG GLU PHE ILE THR GLY LEU SER ALA LEU SEQRES 3 A 208 LEU ASP GLU GLN PRO GLY GLU ALA ARG ILE LEU ARG GLU SEQRES 4 A 208 GLY GLY ALA LEU LEU ALA ARG LEU VAL ALA ARG ASP ASP SEQRES 5 A 208 TRP LEU PRO ASP ALA PHE ALA GLN PRO HIS PRO GLU TYR SEQRES 6 A 208 TYR GLN GLN MSE LEU LEU HIS CYS ASP SER ALA GLU ARG SEQRES 7 A 208 PHE SER ILE VAL SER PHE VAL TRP GLY PRO GLY GLN ARG SEQRES 8 A 208 THR PRO ILE HIS ASP HIS THR VAL TRP GLY LEU ILE GLY SEQRES 9 A 208 MSE LEU ARG GLY ALA GLU TYR SER GLN PRO PHE VAL LEU SEQRES 10 A 208 ASP GLY SER GLY ARG PRO VAL LEU HIS GLY GLU PRO THR SEQRES 11 A 208 ARG LEU GLU PRO GLY HIS VAL GLU ALA VAL SER PRO THR SEQRES 12 A 208 VAL GLY ASP ILE HIS ARG VAL HIS ASN ALA TYR ASP ASP SEQRES 13 A 208 ARG VAL SER ILE SER ILE HIS VAL TYR GLY ALA ASN ILE SEQRES 14 A 208 GLY GLY VAL ARG ARG SER VAL TYR THR GLU ALA GLY GLU SEQRES 15 A 208 ARG LYS PRO PHE ILE SER GLY TYR SER ASN PRO TYR LEU SEQRES 16 A 208 PRO ASN PRO TRP ASP ARG SER LYS ASP SER ALA ALA SER MODRES 2GM6 MSE A 68 MET SELENOMETHIONINE MODRES 2GM6 MSE A 104 MET SELENOMETHIONINE HET MSE A 68 8 HET MSE A 104 8 HET FE A 500 1 HET SO4 A 501 5 HET SO4 A 502 5 HET EDO A 503 4 HET EDO A 504 4 HET EDO A 505 4 HET EDO A 506 4 HETNAM MSE SELENOMETHIONINE HETNAM FE FE (III) ION HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 2 FE FE 3+ FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 EDO 4(C2 H6 O2) FORMUL 9 HOH *213(H2 O) HELIX 1 1 LEU A 12 GLU A 28 1 17 HELIX 2 2 GLY A 31 ARG A 49 1 19 HELIX 3 3 PRO A 54 ALA A 58 5 5 HELIX 4 4 ASN A 167 VAL A 171 5 5 SHEET 1 A 5 GLN A 66 CYS A 72 0 SHEET 2 A 5 SER A 79 TRP A 85 -1 O ILE A 80 N LEU A 70 SHEET 3 A 5 SER A 158 TYR A 164 -1 O SER A 160 N PHE A 83 SHEET 4 A 5 GLY A 100 ARG A 106 -1 N ARG A 106 O ILE A 159 SHEET 5 A 5 VAL A 136 VAL A 139 -1 O GLU A 137 N ILE A 102 SHEET 1 B 3 PRO A 122 LEU A 124 0 SHEET 2 B 3 GLU A 109 LEU A 116 -1 N VAL A 115 O VAL A 123 SHEET 3 B 3 THR A 129 LEU A 131 -1 O LEU A 131 N GLU A 109 SHEET 1 C 3 PRO A 122 LEU A 124 0 SHEET 2 C 3 GLU A 109 LEU A 116 -1 N VAL A 115 O VAL A 123 SHEET 3 C 3 HIS A 147 ASN A 151 -1 O ARG A 148 N GLN A 112 SHEET 1 D 2 ARG A 173 TYR A 176 0 SHEET 2 D 2 ARG A 182 PHE A 185 -1 O PHE A 185 N ARG A 173 LINK C GLN A 67 N MSE A 68 1555 1555 1.32 LINK C MSE A 68 N LEU A 69 1555 1555 1.33 LINK C GLY A 103 N MSE A 104 1555 1555 1.33 LINK C MSE A 104 N LEU A 105 1555 1555 1.33 LINK FE FE A 500 NE2 HIS A 147 1555 1555 2.22 LINK FE FE A 500 O HOH A 695 1555 1555 2.34 LINK FE FE A 500 NE2 HIS A 96 1555 1555 2.08 LINK FE FE A 500 NE2 HIS A 94 1555 1555 2.19 LINK FE FE A 500 O1 SO4 A 501 1555 1555 2.25 LINK FE FE A 500 O HOH A 539 1555 1555 2.46 SITE 1 AC1 6 HIS A 94 HIS A 96 HIS A 147 SO4 A 501 SITE 2 AC1 6 HOH A 539 HOH A 695 SITE 1 AC2 7 PHE A 83 HIS A 94 HIS A 96 TYR A 164 SITE 2 AC2 7 ARG A 173 FE A 500 HOH A 695 SITE 1 AC3 4 PRO A 30 GLY A 31 ARG A 34 HOH A 548 SITE 1 AC4 5 PRO A 54 ASP A 55 ALA A 56 HOH A 578 SITE 2 AC4 5 HOH A 584 SITE 1 AC5 6 ALA A 44 ARG A 45 ALA A 48 GLY A 134 SITE 2 AC5 6 HOH A 555 HOH A 653 SITE 1 AC6 3 ASP A 117 GLY A 118 HOH A 671 SITE 1 AC7 4 ARG A 45 LEU A 46 ARG A 49 ASP A 51 CRYST1 57.170 57.170 216.795 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017492 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017492 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004613 0.00000