HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 07-APR-06 2GMQ TITLE CRYSTAL STRUCTURE OF PROTEIN EF0006 FROM ENTEROCOCCUS FAECALIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN EF0006; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; SOURCE 3 ORGANISM_TAXID: 1351; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) DERIVATIVE; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PMCSG KEYWDS ENTEROCOCCUS FAECALIS, HYPOTHETICAL PROTEIN, STRUCTURAL GENOMICS, KEYWDS 2 PSI, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, MCSG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR C.CHANG,L.VOLKART,S.F.MOY,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 5 13-JUL-11 2GMQ 1 VERSN REVDAT 4 24-FEB-09 2GMQ 1 VERSN REVDAT 3 04-DEC-07 2GMQ 1 AUTHOR JRNL REVDAT 2 19-DEC-06 2GMQ 1 TITLE JRNL REVDAT 1 09-MAY-06 2GMQ 0 JRNL AUTH C.CHANG,L.VOLKART,S.MOY,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF PROTEIN EF0006 FROM ENTEROCOCCUS JRNL TITL 2 FAECALIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 3 NUMBER OF REFLECTIONS : 26281 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1401 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.76 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1713 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.2950 REMARK 3 BIN FREE R VALUE SET COUNT : 98 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1611 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 177 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.73000 REMARK 3 B22 (A**2) : 1.03000 REMARK 3 B33 (A**2) : 0.70000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.113 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.108 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.080 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.876 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1846 ; 0.026 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2532 ; 2.025 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 251 ; 6.388 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 86 ;35.727 ;25.349 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 392 ;16.659 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;26.300 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 290 ; 0.149 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1366 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 894 ; 0.240 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1259 ; 0.315 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 165 ; 0.200 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 62 ; 0.333 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 34 ; 0.279 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1124 ; 1.644 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1786 ; 2.064 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 854 ; 3.419 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 716 ; 4.759 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 12 A 21 REMARK 3 RESIDUE RANGE : A 61 A 78 REMARK 3 ORIGIN FOR THE GROUP (A): 35.2340 10.3340 13.5710 REMARK 3 T TENSOR REMARK 3 T11: 0.0442 T22: -0.2025 REMARK 3 T33: -0.1309 T12: -0.0285 REMARK 3 T13: 0.0005 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 4.7218 L22: 7.4823 REMARK 3 L33: 2.5781 L12: 2.9608 REMARK 3 L13: -0.3251 L23: -2.4894 REMARK 3 S TENSOR REMARK 3 S11: -0.1397 S12: 0.0901 S13: -0.2199 REMARK 3 S21: -0.4178 S22: 0.0151 S23: -0.0673 REMARK 3 S31: 0.1940 S32: -0.0353 S33: 0.1246 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 22 A 41 REMARK 3 RESIDUE RANGE : A 79 A 100 REMARK 3 ORIGIN FOR THE GROUP (A): 26.1190 17.1920 17.9850 REMARK 3 T TENSOR REMARK 3 T11: 0.0236 T22: -0.1818 REMARK 3 T33: 0.1354 T12: 0.0153 REMARK 3 T13: 0.0047 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 3.4025 L22: 4.9210 REMARK 3 L33: 3.4586 L12: 2.0700 REMARK 3 L13: -1.6418 L23: -2.1806 REMARK 3 S TENSOR REMARK 3 S11: 0.1375 S12: 0.0175 S13: 0.8931 REMARK 3 S21: 0.0426 S22: 0.1375 S23: 1.0326 REMARK 3 S31: -0.2339 S32: -0.1695 S33: -0.2750 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 42 A 60 REMARK 3 RESIDUE RANGE : A 101 A 113 REMARK 3 ORIGIN FOR THE GROUP (A): 33.4400 16.9650 14.6190 REMARK 3 T TENSOR REMARK 3 T11: 0.0765 T22: -0.1499 REMARK 3 T33: 0.0210 T12: -0.0109 REMARK 3 T13: -0.0424 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 2.9699 L22: 4.7068 REMARK 3 L33: 1.1694 L12: 3.0668 REMARK 3 L13: -0.7427 L23: -0.9613 REMARK 3 S TENSOR REMARK 3 S11: -0.1822 S12: 0.2351 S13: 0.5903 REMARK 3 S21: -0.2813 S22: 0.2765 S23: 0.6297 REMARK 3 S31: -0.0624 S32: -0.1102 S33: -0.0943 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 14 B 21 REMARK 3 RESIDUE RANGE : B 61 B 78 REMARK 3 ORIGIN FOR THE GROUP (A): 31.2320 14.7040 48.6040 REMARK 3 T TENSOR REMARK 3 T11: -0.0676 T22: -0.1350 REMARK 3 T33: -0.1477 T12: -0.0282 REMARK 3 T13: 0.0018 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 6.8844 L22: 5.2111 REMARK 3 L33: 2.4737 L12: 3.9103 REMARK 3 L13: 0.7225 L23: -0.0286 REMARK 3 S TENSOR REMARK 3 S11: -0.0782 S12: -0.1994 S13: 0.0591 REMARK 3 S21: 0.0410 S22: -0.0641 S23: 0.1440 REMARK 3 S31: -0.0215 S32: -0.1486 S33: 0.1423 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 22 B 41 REMARK 3 RESIDUE RANGE : B 79 B 110 REMARK 3 ORIGIN FOR THE GROUP (A): 35.6320 6.2770 43.6830 REMARK 3 T TENSOR REMARK 3 T11: -0.0639 T22: -0.1855 REMARK 3 T33: 0.0335 T12: 0.0105 REMARK 3 T13: 0.0253 T23: -0.0218 REMARK 3 L TENSOR REMARK 3 L11: 5.3442 L22: 3.2113 REMARK 3 L33: 3.0884 L12: 2.4918 REMARK 3 L13: 1.4075 L23: 0.9058 REMARK 3 S TENSOR REMARK 3 S11: 0.1298 S12: 0.0808 S13: -0.8507 REMARK 3 S21: -0.0033 S22: 0.0925 S23: -0.6995 REMARK 3 S31: 0.1067 S32: 0.1799 S33: -0.2223 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 42 B 60 REMARK 3 RESIDUE RANGE : B 111 B 113 REMARK 3 ORIGIN FOR THE GROUP (A): 43.3190 14.0940 52.2420 REMARK 3 T TENSOR REMARK 3 T11: 0.0332 T22: -0.0464 REMARK 3 T33: 0.0867 T12: -0.0420 REMARK 3 T13: -0.0791 T23: 0.0882 REMARK 3 L TENSOR REMARK 3 L11: 6.2263 L22: 3.6672 REMARK 3 L33: 2.2887 L12: 4.7240 REMARK 3 L13: 1.8417 L23: 1.0169 REMARK 3 S TENSOR REMARK 3 S11: 0.5453 S12: -0.5420 S13: -1.0177 REMARK 3 S21: 0.4277 S22: -0.4168 S23: -0.9022 REMARK 3 S31: 0.1958 S32: 0.0218 S33: -0.1284 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2GMQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-APR-06. REMARK 100 THE RCSB ID CODE IS RCSB037304. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97929, 0.97940 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SBCCOLLECT REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28088 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.0900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.63500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.820 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: HKL-3000, SHELXE, SOLVE/RESOLVE, ARP/WARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2 M CACL2, 0.1 M TRIS, REMARK 280 PH 8.1, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y,-Z REMARK 290 8555 X,-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 41.56100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.95850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.70000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 41.95850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.56100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.70000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 41.56100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.70000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 41.95850 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.70000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 41.56100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 41.95850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: EACH OF MOLECULE A AND B MAKES DIMER WITH SYMMETRY PAIR REMARK 300 USING OPERATOR (1-X, 1/2-Y, Z) REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 83.12200 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 41.70000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 119 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 119 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 GLU A 2 REMARK 465 ALA A 3 REMARK 465 VAL A 4 REMARK 465 VAL A 5 REMARK 465 VAL A 6 REMARK 465 GLU A 7 REMARK 465 ARG A 8 REMARK 465 GLU A 9 REMARK 465 ALA A 10 REMARK 465 LYS A 11 REMARK 465 ASN A 88 REMARK 465 LEU A 89 REMARK 465 GLY A 90 REMARK 465 GLU A 114 REMARK 465 THR A 115 REMARK 465 LEU A 116 REMARK 465 LYS A 117 REMARK 465 ALA A 118 REMARK 465 MSE B 1 REMARK 465 GLU B 2 REMARK 465 ALA B 3 REMARK 465 VAL B 4 REMARK 465 VAL B 5 REMARK 465 VAL B 6 REMARK 465 GLU B 7 REMARK 465 ARG B 8 REMARK 465 GLU B 9 REMARK 465 ALA B 10 REMARK 465 LYS B 11 REMARK 465 GLY B 12 REMARK 465 ASN B 88 REMARK 465 LEU B 89 REMARK 465 GLU B 114 REMARK 465 THR B 115 REMARK 465 LEU B 116 REMARK 465 LYS B 117 REMARK 465 ALA B 118 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 91 CG CD NE CZ NH1 NH2 REMARK 470 MSE B 13 CG SE CE REMARK 470 ARG B 91 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 105 OE1 GLU B 109 2.06 REMARK 500 O HOH B 154 O HOH B 166 2.15 REMARK 500 OD1 ASN B 65 OG SER B 72 2.18 REMARK 500 OE1 GLU A 109 NH1 ARG B 105 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS B 21 O HOH B 163 6655 1.93 REMARK 500 O HOH A 147 O HOH A 194 6655 2.15 REMARK 500 NZ LYS B 21 O HOH B 122 6655 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 56 CG GLU A 56 CD 0.104 REMARK 500 GLU A 56 CD GLU A 56 OE1 0.071 REMARK 500 GLU A 110 CD GLU A 110 OE2 0.069 REMARK 500 GLU B 56 CG GLU B 56 CD 0.103 REMARK 500 GLU B 56 CD GLU B 56 OE1 0.070 REMARK 500 GLU B 56 CD GLU B 56 OE2 0.073 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 105 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 LEU B 23 CB - CG - CD2 ANGL. DEV. = -11.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 30 -18.70 66.20 REMARK 500 LYS A 68 139.17 -172.74 REMARK 500 ASN B 30 -17.49 68.50 REMARK 500 LYS B 68 143.36 -174.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS B 86 PRO B 87 -44.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC28809 RELATED DB: TARGETDB DBREF 2GMQ A 1 118 UNP Q82YS4 Q82YS4_ENTFA 1 118 DBREF 2GMQ B 1 118 UNP Q82YS4 Q82YS4_ENTFA 1 118 SEQADV 2GMQ MSE A 1 UNP Q82YS4 MET 1 MODIFIED RESIDUE SEQADV 2GMQ MSE A 13 UNP Q82YS4 MET 13 MODIFIED RESIDUE SEQADV 2GMQ MSE A 45 UNP Q82YS4 MET 45 MODIFIED RESIDUE SEQADV 2GMQ MSE A 47 UNP Q82YS4 MET 47 MODIFIED RESIDUE SEQADV 2GMQ MSE B 1 UNP Q82YS4 MET 1 MODIFIED RESIDUE SEQADV 2GMQ MSE B 13 UNP Q82YS4 MET 13 MODIFIED RESIDUE SEQADV 2GMQ MSE B 45 UNP Q82YS4 MET 45 MODIFIED RESIDUE SEQADV 2GMQ MSE B 47 UNP Q82YS4 MET 47 MODIFIED RESIDUE SEQRES 1 A 118 MSE GLU ALA VAL VAL VAL GLU ARG GLU ALA LYS GLY MSE SEQRES 2 A 118 LYS GLU ILE ALA ILE GLN GLU LYS ASP LEU THR LEU GLN SEQRES 3 A 118 TRP ARG GLY ASN THR GLY LYS LEU VAL LYS VAL ARG LEU SEQRES 4 A 118 LYS ASN THR ARG ALA MSE GLU MSE TRP TYR ASN LYS GLN SEQRES 5 A 118 ILE THR GLU GLU ASN ILE GLN GLU ILE THR THR LEU ASN SEQRES 6 A 118 ILE ILE LYS ASN GLY LYS SER LEU ALA LEU GLU VAL TYR SEQRES 7 A 118 PRO GLU LYS SER ILE TYR VAL LYS PRO ASN LEU GLY ARG SEQRES 8 A 118 ILE ASN VAL PRO VAL PHE PHE ILE LYS THR PRO ILE ASN SEQRES 9 A 118 ARG GLY VAL PHE GLU GLU ILE PHE GLY GLU THR LEU LYS SEQRES 10 A 118 ALA SEQRES 1 B 118 MSE GLU ALA VAL VAL VAL GLU ARG GLU ALA LYS GLY MSE SEQRES 2 B 118 LYS GLU ILE ALA ILE GLN GLU LYS ASP LEU THR LEU GLN SEQRES 3 B 118 TRP ARG GLY ASN THR GLY LYS LEU VAL LYS VAL ARG LEU SEQRES 4 B 118 LYS ASN THR ARG ALA MSE GLU MSE TRP TYR ASN LYS GLN SEQRES 5 B 118 ILE THR GLU GLU ASN ILE GLN GLU ILE THR THR LEU ASN SEQRES 6 B 118 ILE ILE LYS ASN GLY LYS SER LEU ALA LEU GLU VAL TYR SEQRES 7 B 118 PRO GLU LYS SER ILE TYR VAL LYS PRO ASN LEU GLY ARG SEQRES 8 B 118 ILE ASN VAL PRO VAL PHE PHE ILE LYS THR PRO ILE ASN SEQRES 9 B 118 ARG GLY VAL PHE GLU GLU ILE PHE GLY GLU THR LEU LYS SEQRES 10 B 118 ALA MODRES 2GMQ MSE A 13 MET SELENOMETHIONINE MODRES 2GMQ MSE A 45 MET SELENOMETHIONINE MODRES 2GMQ MSE A 47 MET SELENOMETHIONINE MODRES 2GMQ MSE B 13 MET SELENOMETHIONINE MODRES 2GMQ MSE B 45 MET SELENOMETHIONINE MODRES 2GMQ MSE B 47 MET SELENOMETHIONINE HET MSE A 13 8 HET MSE A 45 13 HET MSE A 47 8 HET MSE B 13 5 HET MSE B 45 13 HET MSE B 47 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 HOH *177(H2 O) HELIX 1 1 GLY A 29 THR A 31 5 3 HELIX 2 2 LYS A 40 LYS A 51 1 12 HELIX 3 3 ASN A 57 ILE A 61 5 5 HELIX 4 4 TYR A 78 SER A 82 5 5 HELIX 5 5 ASN A 104 GLY A 113 1 10 HELIX 6 6 GLY B 29 THR B 31 5 3 HELIX 7 7 LYS B 40 LYS B 51 1 12 HELIX 8 8 ASN B 57 ILE B 61 5 5 HELIX 9 9 TYR B 78 SER B 82 5 5 HELIX 10 10 ASN B 104 GLY B 113 1 10 SHEET 1 A 3 GLU A 15 GLN A 19 0 SHEET 2 A 3 THR A 63 LYS A 68 1 O ASN A 65 N ILE A 16 SHEET 3 A 3 LYS A 71 GLU A 76 -1 O LEU A 75 N LEU A 64 SHEET 1 B 4 LEU A 23 TRP A 27 0 SHEET 2 B 4 LEU A 34 LEU A 39 -1 O LYS A 36 N GLN A 26 SHEET 3 B 4 VAL A 94 PHE A 98 -1 O PHE A 97 N VAL A 37 SHEET 4 B 4 ILE A 83 VAL A 85 -1 N VAL A 85 O VAL A 94 SHEET 1 C 3 GLU B 15 GLN B 19 0 SHEET 2 C 3 THR B 63 LYS B 68 1 O ASN B 65 N ILE B 16 SHEET 3 C 3 LYS B 71 GLU B 76 -1 O LEU B 75 N LEU B 64 SHEET 1 D 4 LEU B 23 TRP B 27 0 SHEET 2 D 4 LEU B 34 LEU B 39 -1 O VAL B 35 N GLN B 26 SHEET 3 D 4 VAL B 94 PHE B 98 -1 O PHE B 97 N VAL B 37 SHEET 4 D 4 ILE B 83 VAL B 85 -1 N VAL B 85 O VAL B 94 LINK C GLY A 12 N MSE A 13 1555 1555 1.34 LINK C MSE A 13 N LYS A 14 1555 1555 1.32 LINK C ALA A 44 N MSE A 45 1555 1555 1.35 LINK C MSE A 45 N GLU A 46 1555 1555 1.32 LINK C GLU A 46 N MSE A 47 1555 1555 1.36 LINK C MSE A 47 N TRP A 48 1555 1555 1.35 LINK C MSE B 13 N LYS B 14 1555 1555 1.33 LINK C ALA B 44 N MSE B 45 1555 1555 1.34 LINK C MSE B 45 N GLU B 46 1555 1555 1.32 LINK C GLU B 46 N MSE B 47 1555 1555 1.35 LINK C MSE B 47 N TRP B 48 1555 1555 1.35 CRYST1 83.122 83.400 83.917 90.00 90.00 90.00 I 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012031 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011990 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011917 0.00000