data_2GNO # _entry.id 2GNO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2GNO pdb_00002gno 10.2210/pdb2gno/pdb RCSB RCSB037334 ? ? WWPDB D_1000037334 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 360384 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2GNO _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-04-10 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of DNA polymerase III, gamma subunit-related protein (tm0771) from Thermotoga maritima at 2.00 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 2GNO _cell.length_a 135.560 _cell.length_b 135.560 _cell.length_c 35.560 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.Int_Tables_number 79 _symmetry.space_group_name_H-M 'I 4' _symmetry.entry_id 2GNO _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase III, gamma subunit-related protein' 35485.527 1 ? ? 'residues 9-312' ? 2 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 3 non-polymer syn 'UNKNOWN LIGAND' ? 1 ? ? ? ? 4 non-polymer syn 2-ETHOXYETHANOL 90.121 2 ? ? ? ? 5 water nat water 18.015 107 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GAKDQLETLKRIIEKSEGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGENIGIDDIRTIKDFLNYSPEL YTRKYVIVHDCER(MSE)TQQAANAFLKALEEPPEYAVIVLNTRRWHYLLPTIKSRVFRVVVNVPKEFRDLVKEKIGDLW EELPLLERDFKTALEAYKLGAEKLSGL(MSE)ESLKVLETEKLLKKVLSKGLEGYLACRELLERFSKVESKEFFALFDQV TNTITGKDAFLLIQRLTRIILHENTWESVEDQKSVSFLDSILRVKIANLNNKLTL(MSE)NILAIHRERKRGVNAWS ; _entity_poly.pdbx_seq_one_letter_code_can ;GAKDQLETLKRIIEKSEGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGENIGIDDIRTIKDFLNYSPEL YTRKYVIVHDCERMTQQAANAFLKALEEPPEYAVIVLNTRRWHYLLPTIKSRVFRVVVNVPKEFRDLVKEKIGDLWEELP LLERDFKTALEAYKLGAEKLSGLMESLKVLETEKLLKKVLSKGLEGYLACRELLERFSKVESKEFFALFDQVTNTITGKD AFLLIQRLTRIILHENTWESVEDQKSVSFLDSILRVKIANLNNKLTLMNILAIHRERKRGVNAWS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 360384 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 LYS n 1 4 ASP n 1 5 GLN n 1 6 LEU n 1 7 GLU n 1 8 THR n 1 9 LEU n 1 10 LYS n 1 11 ARG n 1 12 ILE n 1 13 ILE n 1 14 GLU n 1 15 LYS n 1 16 SER n 1 17 GLU n 1 18 GLY n 1 19 ILE n 1 20 SER n 1 21 ILE n 1 22 LEU n 1 23 ILE n 1 24 ASN n 1 25 GLY n 1 26 GLU n 1 27 ASP n 1 28 LEU n 1 29 SER n 1 30 TYR n 1 31 PRO n 1 32 ARG n 1 33 GLU n 1 34 VAL n 1 35 SER n 1 36 LEU n 1 37 GLU n 1 38 LEU n 1 39 PRO n 1 40 GLU n 1 41 TYR n 1 42 VAL n 1 43 GLU n 1 44 LYS n 1 45 PHE n 1 46 PRO n 1 47 PRO n 1 48 LYS n 1 49 ALA n 1 50 SER n 1 51 ASP n 1 52 VAL n 1 53 LEU n 1 54 GLU n 1 55 ILE n 1 56 ASP n 1 57 PRO n 1 58 GLU n 1 59 GLY n 1 60 GLU n 1 61 ASN n 1 62 ILE n 1 63 GLY n 1 64 ILE n 1 65 ASP n 1 66 ASP n 1 67 ILE n 1 68 ARG n 1 69 THR n 1 70 ILE n 1 71 LYS n 1 72 ASP n 1 73 PHE n 1 74 LEU n 1 75 ASN n 1 76 TYR n 1 77 SER n 1 78 PRO n 1 79 GLU n 1 80 LEU n 1 81 TYR n 1 82 THR n 1 83 ARG n 1 84 LYS n 1 85 TYR n 1 86 VAL n 1 87 ILE n 1 88 VAL n 1 89 HIS n 1 90 ASP n 1 91 CYS n 1 92 GLU n 1 93 ARG n 1 94 MSE n 1 95 THR n 1 96 GLN n 1 97 GLN n 1 98 ALA n 1 99 ALA n 1 100 ASN n 1 101 ALA n 1 102 PHE n 1 103 LEU n 1 104 LYS n 1 105 ALA n 1 106 LEU n 1 107 GLU n 1 108 GLU n 1 109 PRO n 1 110 PRO n 1 111 GLU n 1 112 TYR n 1 113 ALA n 1 114 VAL n 1 115 ILE n 1 116 VAL n 1 117 LEU n 1 118 ASN n 1 119 THR n 1 120 ARG n 1 121 ARG n 1 122 TRP n 1 123 HIS n 1 124 TYR n 1 125 LEU n 1 126 LEU n 1 127 PRO n 1 128 THR n 1 129 ILE n 1 130 LYS n 1 131 SER n 1 132 ARG n 1 133 VAL n 1 134 PHE n 1 135 ARG n 1 136 VAL n 1 137 VAL n 1 138 VAL n 1 139 ASN n 1 140 VAL n 1 141 PRO n 1 142 LYS n 1 143 GLU n 1 144 PHE n 1 145 ARG n 1 146 ASP n 1 147 LEU n 1 148 VAL n 1 149 LYS n 1 150 GLU n 1 151 LYS n 1 152 ILE n 1 153 GLY n 1 154 ASP n 1 155 LEU n 1 156 TRP n 1 157 GLU n 1 158 GLU n 1 159 LEU n 1 160 PRO n 1 161 LEU n 1 162 LEU n 1 163 GLU n 1 164 ARG n 1 165 ASP n 1 166 PHE n 1 167 LYS n 1 168 THR n 1 169 ALA n 1 170 LEU n 1 171 GLU n 1 172 ALA n 1 173 TYR n 1 174 LYS n 1 175 LEU n 1 176 GLY n 1 177 ALA n 1 178 GLU n 1 179 LYS n 1 180 LEU n 1 181 SER n 1 182 GLY n 1 183 LEU n 1 184 MSE n 1 185 GLU n 1 186 SER n 1 187 LEU n 1 188 LYS n 1 189 VAL n 1 190 LEU n 1 191 GLU n 1 192 THR n 1 193 GLU n 1 194 LYS n 1 195 LEU n 1 196 LEU n 1 197 LYS n 1 198 LYS n 1 199 VAL n 1 200 LEU n 1 201 SER n 1 202 LYS n 1 203 GLY n 1 204 LEU n 1 205 GLU n 1 206 GLY n 1 207 TYR n 1 208 LEU n 1 209 ALA n 1 210 CYS n 1 211 ARG n 1 212 GLU n 1 213 LEU n 1 214 LEU n 1 215 GLU n 1 216 ARG n 1 217 PHE n 1 218 SER n 1 219 LYS n 1 220 VAL n 1 221 GLU n 1 222 SER n 1 223 LYS n 1 224 GLU n 1 225 PHE n 1 226 PHE n 1 227 ALA n 1 228 LEU n 1 229 PHE n 1 230 ASP n 1 231 GLN n 1 232 VAL n 1 233 THR n 1 234 ASN n 1 235 THR n 1 236 ILE n 1 237 THR n 1 238 GLY n 1 239 LYS n 1 240 ASP n 1 241 ALA n 1 242 PHE n 1 243 LEU n 1 244 LEU n 1 245 ILE n 1 246 GLN n 1 247 ARG n 1 248 LEU n 1 249 THR n 1 250 ARG n 1 251 ILE n 1 252 ILE n 1 253 LEU n 1 254 HIS n 1 255 GLU n 1 256 ASN n 1 257 THR n 1 258 TRP n 1 259 GLU n 1 260 SER n 1 261 VAL n 1 262 GLU n 1 263 ASP n 1 264 GLN n 1 265 LYS n 1 266 SER n 1 267 VAL n 1 268 SER n 1 269 PHE n 1 270 LEU n 1 271 ASP n 1 272 SER n 1 273 ILE n 1 274 LEU n 1 275 ARG n 1 276 VAL n 1 277 LYS n 1 278 ILE n 1 279 ALA n 1 280 ASN n 1 281 LEU n 1 282 ASN n 1 283 ASN n 1 284 LYS n 1 285 LEU n 1 286 THR n 1 287 LEU n 1 288 MSE n 1 289 ASN n 1 290 ILE n 1 291 LEU n 1 292 ALA n 1 293 ILE n 1 294 HIS n 1 295 ARG n 1 296 GLU n 1 297 ARG n 1 298 LYS n 1 299 ARG n 1 300 GLY n 1 301 VAL n 1 302 ASN n 1 303 ALA n 1 304 TRP n 1 305 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermotoga _entity_src_gen.pdbx_gene_src_gene tm0771 _entity_src_gen.gene_src_species 'Thermotoga maritima' _entity_src_gen.gene_src_strain MSB8 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermotoga maritima' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 243274 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9WZM9_THEMA _struct_ref.pdbx_db_accession Q9WZM9 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 9 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2GNO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 305 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9WZM9 _struct_ref_seq.db_align_beg 9 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 312 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 9 _struct_ref_seq.pdbx_auth_seq_align_end 312 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2GNO GLY A 1 ? UNP Q9WZM9 ? ? 'expression tag' 8 1 1 2GNO MSE A 94 ? UNP Q9WZM9 MET 101 'modified residue' 101 2 1 2GNO MSE A 184 ? UNP Q9WZM9 MET 191 'modified residue' 191 3 1 2GNO MSE A 288 ? UNP Q9WZM9 MET 295 'modified residue' 295 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 ETX non-polymer . 2-ETHOXYETHANOL ? 'C4 H10 O2' 90.121 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNL non-polymer . 'UNKNOWN LIGAND' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2GNO # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 46.22 _exptl_crystal.density_Matthews 2.31 _exptl_crystal.description ? _exptl_crystal.density_meas ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP, NANODROP' _exptl_crystal_grow.pH 6.2 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '35.0% 2-ethoxyethanol, 0.2M NaCl, 0.1M Na,K-Phosphate, pH 6.2, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2005-12-18 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.979224 1.0 2 0.918370 1.0 3 0.978940 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.979224, 0.918370, 0.978940' _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 2GNO _reflns.d_resolution_high 2.000 _reflns.number_obs 22105 _reflns.pdbx_Rmerge_I_obs 0.041 _reflns.pdbx_netI_over_sigmaI 11.880 _reflns.percent_possible_obs 94.700 _reflns.B_iso_Wilson_estimate 42.314 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_low 27.9 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_all _reflns_shell.number_unique_all _reflns_shell.percent_possible_obs _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.00 2.07 6860 ? 3580 0.415 2.0 ? ? ? 83.80 ? ? 1 1 2.07 2.15 7034 ? 3711 0.314 2.7 ? ? ? 90.10 ? ? 2 1 2.15 2.25 7757 ? 4060 0.251 3.3 ? ? ? 92.20 ? ? 3 1 2.25 2.37 7788 ? 4072 0.184 4.5 ? ? ? 93.60 ? ? 4 1 2.37 2.52 7968 ? 4166 0.125 6.3 ? ? ? 97.00 ? ? 5 1 2.52 2.71 7792 ? 4088 0.093 8.3 ? ? ? 97.80 ? ? 6 1 2.71 2.99 8351 ? 4353 0.067 10.9 ? ? ? 98.70 ? ? 7 1 2.99 3.42 8021 ? 4231 0.046 15.5 ? ? ? 99.70 ? ? 8 1 3.42 ? 7896 ? 4199 0.025 25.1 ? ? ? 99.10 ? ? 9 1 # _refine.ls_d_res_high 2.000 _refine.ls_d_res_low 27.94 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.260 _refine.ls_number_reflns_obs 22103 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1). HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2). A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3). TWO MOLECULES OF 2-ETHOXYETHANOL FROM THE CRYSTALLIZATION BUFFER HAS BEEN MODELED INTO THE STRUCTURE. 4). AN UNKNOWN LIGAND HAS BEEN MODELED INTO THE STRUCTURE BETWEEN THE SIDECHAINS OF LEU 168 AND ARG 254. 5.) ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22 _refine.ls_R_factor_R_free 0.278 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1130 _refine.B_iso_mean 34.573 _refine.aniso_B[1][1] -0.960 _refine.aniso_B[2][2] -0.960 _refine.aniso_B[3][3] 1.910 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.943 _refine.correlation_coeff_Fo_to_Fc_free 0.907 _refine.pdbx_overall_ESU_R 0.217 _refine.pdbx_overall_ESU_R_Free 0.197 _refine.overall_SU_ML 0.153 _refine.overall_SU_B 10.889 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.entry_id 2GNO _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.223 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2346 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 17 _refine_hist.number_atoms_solvent 107 _refine_hist.number_atoms_total 2470 _refine_hist.d_res_high 2.000 _refine_hist.d_res_low 27.94 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2466 0.013 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 2343 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3341 1.684 1.989 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 5432 1.188 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 309 2.099 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 107 25.182 24.112 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 458 8.319 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18 8.252 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 387 0.107 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2707 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 487 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 532 0.180 0.300 ? 'X-RAY DIFFRACTION' ? r_nbd_other 2275 0.123 0.300 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1206 0.165 0.500 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 1307 0.081 0.500 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 174 0.169 0.500 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 11 0.145 0.300 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 55 0.109 0.300 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 17 0.220 0.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1513 1.427 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 605 0.385 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2458 2.420 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 977 4.208 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 881 6.140 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.001 _refine_ls_shell.d_res_low 2.053 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.130 _refine_ls_shell.number_reflns_R_work 1504 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.257 _refine_ls_shell.R_factor_R_free 0.306 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 95 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 1599 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2GNO _struct.title ;Crystal structure of a dna polymerase iii, gamma subunit-related protein (tm0771) from thermotoga maritima msb8 at 2.00 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'Structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, replication' _struct_keywords.pdbx_keywords REPLICATION _struct_keywords.entry_id 2GNO # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 4 ? LYS A 15 ? ASP A 11 LYS A 22 1 ? 12 HELX_P HELX_P2 2 SER A 29 ? LYS A 44 ? SER A 36 LYS A 51 1 ? 16 HELX_P HELX_P3 3 GLY A 63 ? ASN A 75 ? GLY A 70 ASN A 82 1 ? 13 HELX_P HELX_P4 4 ASP A 90 ? MSE A 94 ? ASP A 97 MSE A 101 5 ? 5 HELX_P HELX_P5 5 THR A 95 ? PHE A 102 ? THR A 102 PHE A 109 1 ? 8 HELX_P HELX_P6 6 PHE A 102 ? GLU A 108 ? PHE A 109 GLU A 115 1 ? 7 HELX_P HELX_P7 7 ARG A 121 ? LEU A 125 ? ARG A 128 LEU A 132 5 ? 5 HELX_P HELX_P8 8 LEU A 126 ? SER A 131 ? LEU A 133 SER A 138 1 ? 6 HELX_P HELX_P9 9 PRO A 141 ? GLY A 153 ? PRO A 148 GLY A 160 1 ? 13 HELX_P HELX_P10 10 ASP A 154 ? LEU A 159 ? ASP A 161 LEU A 166 1 ? 6 HELX_P HELX_P11 11 PRO A 160 ? ARG A 164 ? PRO A 167 ARG A 171 5 ? 5 HELX_P HELX_P12 12 ASP A 165 ? LEU A 190 ? ASP A 172 LEU A 197 1 ? 26 HELX_P HELX_P13 13 GLU A 191 ? LEU A 196 ? GLU A 198 LEU A 203 1 ? 6 HELX_P HELX_P14 14 LYS A 202 ? VAL A 220 ? LYS A 209 VAL A 227 1 ? 19 HELX_P HELX_P15 15 GLU A 221 ? LYS A 223 ? GLU A 228 LYS A 230 5 ? 3 HELX_P HELX_P16 16 GLU A 224 ? ILE A 236 ? GLU A 231 ILE A 243 1 ? 13 HELX_P HELX_P17 17 GLY A 238 ? GLU A 255 ? GLY A 245 GLU A 262 1 ? 18 HELX_P HELX_P18 18 SER A 260 ? ARG A 275 ? SER A 267 ARG A 282 1 ? 16 HELX_P HELX_P19 19 VAL A 276 ? LEU A 281 ? VAL A 283 LEU A 288 5 ? 6 HELX_P HELX_P20 20 ASN A 282 ? ARG A 299 ? ASN A 289 ARG A 306 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ARG 93 C ? ? ? 1_555 A MSE 94 N ? ? A ARG 100 A MSE 101 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale2 covale both ? A MSE 94 C ? ? ? 1_555 A THR 95 N ? ? A MSE 101 A THR 102 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale3 covale both ? A LEU 183 C ? ? ? 1_555 A MSE 184 N ? ? A LEU 190 A MSE 191 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale4 covale both ? A MSE 184 C ? ? ? 1_555 A GLU 185 N B ? A MSE 191 A GLU 192 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale5 covale both ? A MSE 184 C ? ? ? 1_555 A GLU 185 N A ? A MSE 191 A GLU 192 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale6 covale both ? A LEU 287 C ? ? ? 1_555 A MSE 288 N ? ? A LEU 294 A MSE 295 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale7 covale both ? A MSE 288 C ? ? ? 1_555 A ASN 289 N ? ? A MSE 295 A ASN 296 1_555 ? ? ? ? ? ? ? 1.328 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 52 ? ILE A 55 ? VAL A 59 ILE A 62 A 2 LYS A 84 ? VAL A 88 ? LYS A 91 VAL A 95 A 3 ALA A 113 ? THR A 119 ? ALA A 120 THR A 126 A 4 ILE A 19 ? ASN A 24 ? ILE A 26 ASN A 31 A 5 PHE A 134 ? VAL A 137 ? PHE A 141 VAL A 144 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 53 ? N LEU A 60 O ILE A 87 ? O ILE A 94 A 2 3 N VAL A 86 ? N VAL A 93 O VAL A 116 ? O VAL A 123 A 3 4 O LEU A 117 ? O LEU A 124 N ILE A 21 ? N ILE A 28 A 4 5 N ASN A 24 ? N ASN A 31 O VAL A 136 ? O VAL A 143 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A UNL 1 ? 5 'BINDING SITE FOR RESIDUE UNL A 1' AC2 Software A ETX 3 ? 3 'BINDING SITE FOR RESIDUE ETX A 3' AC3 Software A ETX 4 ? 4 'BINDING SITE FOR RESIDUE ETX A 4' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 LEU A 161 ? LEU A 168 . ? 1_555 ? 2 AC1 5 ASP A 165 ? ASP A 172 . ? 1_555 ? 3 AC1 5 GLY A 203 ? GLY A 210 . ? 1_555 ? 4 AC1 5 TYR A 207 ? TYR A 214 . ? 1_555 ? 5 AC1 5 ARG A 247 ? ARG A 254 . ? 1_555 ? 6 AC2 3 GLU A 212 ? GLU A 219 . ? 1_555 ? 7 AC2 3 ARG A 216 ? ARG A 223 . ? 1_555 ? 8 AC2 3 VAL A 220 ? VAL A 227 . ? 1_555 ? 9 AC3 4 LEU A 36 ? LEU A 43 . ? 1_555 ? 10 AC3 4 PRO A 47 ? PRO A 54 . ? 1_555 ? 11 AC3 4 VAL A 52 ? VAL A 59 . ? 1_555 ? 12 AC3 4 LYS A 223 ? LYS A 230 . ? 4_565 ? # _atom_sites.entry_id 2GNO _atom_sites.fract_transf_matrix[1][1] 0.00738 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.00738 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.02812 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 8 ? ? ? A . n A 1 2 ALA 2 9 ? ? ? A . n A 1 3 LYS 3 10 ? ? ? A . n A 1 4 ASP 4 11 11 ASP ASP A . n A 1 5 GLN 5 12 12 GLN GLN A . n A 1 6 LEU 6 13 13 LEU LEU A . n A 1 7 GLU 7 14 14 GLU GLU A . n A 1 8 THR 8 15 15 THR THR A . n A 1 9 LEU 9 16 16 LEU LEU A . n A 1 10 LYS 10 17 17 LYS LYS A . n A 1 11 ARG 11 18 18 ARG ARG A . n A 1 12 ILE 12 19 19 ILE ILE A . n A 1 13 ILE 13 20 20 ILE ILE A . n A 1 14 GLU 14 21 21 GLU GLU A . n A 1 15 LYS 15 22 22 LYS LYS A . n A 1 16 SER 16 23 23 SER SER A . n A 1 17 GLU 17 24 24 GLU GLU A . n A 1 18 GLY 18 25 25 GLY GLY A . n A 1 19 ILE 19 26 26 ILE ILE A . n A 1 20 SER 20 27 27 SER SER A . n A 1 21 ILE 21 28 28 ILE ILE A . n A 1 22 LEU 22 29 29 LEU LEU A . n A 1 23 ILE 23 30 30 ILE ILE A . n A 1 24 ASN 24 31 31 ASN ASN A . n A 1 25 GLY 25 32 32 GLY GLY A . n A 1 26 GLU 26 33 33 GLU GLU A . n A 1 27 ASP 27 34 34 ASP ASP A . n A 1 28 LEU 28 35 35 LEU LEU A . n A 1 29 SER 29 36 36 SER SER A . n A 1 30 TYR 30 37 37 TYR TYR A . n A 1 31 PRO 31 38 38 PRO PRO A . n A 1 32 ARG 32 39 39 ARG ARG A . n A 1 33 GLU 33 40 40 GLU GLU A . n A 1 34 VAL 34 41 41 VAL VAL A . n A 1 35 SER 35 42 42 SER SER A . n A 1 36 LEU 36 43 43 LEU LEU A . n A 1 37 GLU 37 44 44 GLU GLU A . n A 1 38 LEU 38 45 45 LEU LEU A . n A 1 39 PRO 39 46 46 PRO PRO A . n A 1 40 GLU 40 47 47 GLU GLU A . n A 1 41 TYR 41 48 48 TYR TYR A . n A 1 42 VAL 42 49 49 VAL VAL A . n A 1 43 GLU 43 50 50 GLU GLU A . n A 1 44 LYS 44 51 51 LYS LYS A . n A 1 45 PHE 45 52 52 PHE PHE A . n A 1 46 PRO 46 53 53 PRO PRO A . n A 1 47 PRO 47 54 54 PRO PRO A . n A 1 48 LYS 48 55 55 LYS LYS A . n A 1 49 ALA 49 56 56 ALA ALA A . n A 1 50 SER 50 57 57 SER SER A . n A 1 51 ASP 51 58 58 ASP ASP A . n A 1 52 VAL 52 59 59 VAL VAL A . n A 1 53 LEU 53 60 60 LEU LEU A . n A 1 54 GLU 54 61 61 GLU GLU A . n A 1 55 ILE 55 62 62 ILE ILE A . n A 1 56 ASP 56 63 63 ASP ASP A . n A 1 57 PRO 57 64 64 PRO PRO A . n A 1 58 GLU 58 65 65 GLU GLU A . n A 1 59 GLY 59 66 66 GLY GLY A . n A 1 60 GLU 60 67 67 GLU GLU A . n A 1 61 ASN 61 68 68 ASN ASN A . n A 1 62 ILE 62 69 69 ILE ILE A . n A 1 63 GLY 63 70 70 GLY GLY A . n A 1 64 ILE 64 71 71 ILE ILE A . n A 1 65 ASP 65 72 72 ASP ASP A . n A 1 66 ASP 66 73 73 ASP ASP A . n A 1 67 ILE 67 74 74 ILE ILE A . n A 1 68 ARG 68 75 75 ARG ARG A . n A 1 69 THR 69 76 76 THR THR A . n A 1 70 ILE 70 77 77 ILE ILE A . n A 1 71 LYS 71 78 78 LYS LYS A . n A 1 72 ASP 72 79 79 ASP ASP A . n A 1 73 PHE 73 80 80 PHE PHE A . n A 1 74 LEU 74 81 81 LEU LEU A . n A 1 75 ASN 75 82 82 ASN ASN A . n A 1 76 TYR 76 83 83 TYR TYR A . n A 1 77 SER 77 84 84 SER SER A . n A 1 78 PRO 78 85 85 PRO PRO A . n A 1 79 GLU 79 86 86 GLU GLU A . n A 1 80 LEU 80 87 87 LEU LEU A . n A 1 81 TYR 81 88 88 TYR TYR A . n A 1 82 THR 82 89 89 THR THR A . n A 1 83 ARG 83 90 90 ARG ARG A . n A 1 84 LYS 84 91 91 LYS LYS A . n A 1 85 TYR 85 92 92 TYR TYR A . n A 1 86 VAL 86 93 93 VAL VAL A . n A 1 87 ILE 87 94 94 ILE ILE A . n A 1 88 VAL 88 95 95 VAL VAL A . n A 1 89 HIS 89 96 96 HIS HIS A . n A 1 90 ASP 90 97 97 ASP ASP A . n A 1 91 CYS 91 98 98 CYS CYS A . n A 1 92 GLU 92 99 99 GLU GLU A . n A 1 93 ARG 93 100 100 ARG ARG A . n A 1 94 MSE 94 101 101 MSE MSE A . n A 1 95 THR 95 102 102 THR THR A . n A 1 96 GLN 96 103 103 GLN GLN A . n A 1 97 GLN 97 104 104 GLN GLN A . n A 1 98 ALA 98 105 105 ALA ALA A . n A 1 99 ALA 99 106 106 ALA ALA A . n A 1 100 ASN 100 107 107 ASN ASN A . n A 1 101 ALA 101 108 108 ALA ALA A . n A 1 102 PHE 102 109 109 PHE PHE A . n A 1 103 LEU 103 110 110 LEU LEU A . n A 1 104 LYS 104 111 111 LYS LYS A . n A 1 105 ALA 105 112 112 ALA ALA A . n A 1 106 LEU 106 113 113 LEU LEU A . n A 1 107 GLU 107 114 114 GLU GLU A . n A 1 108 GLU 108 115 115 GLU GLU A . n A 1 109 PRO 109 116 116 PRO PRO A . n A 1 110 PRO 110 117 117 PRO PRO A . n A 1 111 GLU 111 118 118 GLU GLU A . n A 1 112 TYR 112 119 119 TYR TYR A . n A 1 113 ALA 113 120 120 ALA ALA A . n A 1 114 VAL 114 121 121 VAL VAL A . n A 1 115 ILE 115 122 122 ILE ILE A . n A 1 116 VAL 116 123 123 VAL VAL A . n A 1 117 LEU 117 124 124 LEU LEU A . n A 1 118 ASN 118 125 125 ASN ASN A . n A 1 119 THR 119 126 126 THR THR A . n A 1 120 ARG 120 127 127 ARG ARG A . n A 1 121 ARG 121 128 128 ARG ARG A . n A 1 122 TRP 122 129 129 TRP TRP A . n A 1 123 HIS 123 130 130 HIS HIS A . n A 1 124 TYR 124 131 131 TYR TYR A . n A 1 125 LEU 125 132 132 LEU LEU A . n A 1 126 LEU 126 133 133 LEU LEU A . n A 1 127 PRO 127 134 134 PRO PRO A . n A 1 128 THR 128 135 135 THR THR A . n A 1 129 ILE 129 136 136 ILE ILE A . n A 1 130 LYS 130 137 137 LYS LYS A . n A 1 131 SER 131 138 138 SER SER A . n A 1 132 ARG 132 139 139 ARG ARG A . n A 1 133 VAL 133 140 140 VAL VAL A . n A 1 134 PHE 134 141 141 PHE PHE A . n A 1 135 ARG 135 142 142 ARG ARG A . n A 1 136 VAL 136 143 143 VAL VAL A . n A 1 137 VAL 137 144 144 VAL VAL A . n A 1 138 VAL 138 145 145 VAL VAL A . n A 1 139 ASN 139 146 146 ASN ASN A . n A 1 140 VAL 140 147 147 VAL VAL A . n A 1 141 PRO 141 148 148 PRO PRO A . n A 1 142 LYS 142 149 149 LYS LYS A . n A 1 143 GLU 143 150 150 GLU GLU A . n A 1 144 PHE 144 151 151 PHE PHE A . n A 1 145 ARG 145 152 152 ARG ARG A . n A 1 146 ASP 146 153 153 ASP ASP A . n A 1 147 LEU 147 154 154 LEU LEU A . n A 1 148 VAL 148 155 155 VAL VAL A . n A 1 149 LYS 149 156 156 LYS LYS A . n A 1 150 GLU 150 157 157 GLU GLU A . n A 1 151 LYS 151 158 158 LYS LYS A . n A 1 152 ILE 152 159 159 ILE ILE A . n A 1 153 GLY 153 160 160 GLY GLY A . n A 1 154 ASP 154 161 161 ASP ASP A . n A 1 155 LEU 155 162 162 LEU LEU A . n A 1 156 TRP 156 163 163 TRP TRP A . n A 1 157 GLU 157 164 164 GLU GLU A . n A 1 158 GLU 158 165 165 GLU GLU A . n A 1 159 LEU 159 166 166 LEU LEU A . n A 1 160 PRO 160 167 167 PRO PRO A . n A 1 161 LEU 161 168 168 LEU LEU A . n A 1 162 LEU 162 169 169 LEU LEU A . n A 1 163 GLU 163 170 170 GLU GLU A . n A 1 164 ARG 164 171 171 ARG ARG A . n A 1 165 ASP 165 172 172 ASP ASP A . n A 1 166 PHE 166 173 173 PHE PHE A . n A 1 167 LYS 167 174 174 LYS LYS A . n A 1 168 THR 168 175 175 THR THR A . n A 1 169 ALA 169 176 176 ALA ALA A . n A 1 170 LEU 170 177 177 LEU LEU A . n A 1 171 GLU 171 178 178 GLU GLU A . n A 1 172 ALA 172 179 179 ALA ALA A . n A 1 173 TYR 173 180 180 TYR TYR A . n A 1 174 LYS 174 181 181 LYS LYS A . n A 1 175 LEU 175 182 182 LEU LEU A . n A 1 176 GLY 176 183 183 GLY GLY A . n A 1 177 ALA 177 184 184 ALA ALA A . n A 1 178 GLU 178 185 185 GLU GLU A . n A 1 179 LYS 179 186 186 LYS LYS A . n A 1 180 LEU 180 187 187 LEU LEU A . n A 1 181 SER 181 188 188 SER SER A . n A 1 182 GLY 182 189 189 GLY GLY A . n A 1 183 LEU 183 190 190 LEU LEU A . n A 1 184 MSE 184 191 191 MSE MSE A . n A 1 185 GLU 185 192 192 GLU GLU A . n A 1 186 SER 186 193 193 SER SER A . n A 1 187 LEU 187 194 194 LEU LEU A . n A 1 188 LYS 188 195 195 LYS LYS A . n A 1 189 VAL 189 196 196 VAL VAL A . n A 1 190 LEU 190 197 197 LEU LEU A . n A 1 191 GLU 191 198 198 GLU GLU A . n A 1 192 THR 192 199 199 THR THR A . n A 1 193 GLU 193 200 200 GLU GLU A . n A 1 194 LYS 194 201 201 LYS LYS A . n A 1 195 LEU 195 202 202 LEU LEU A . n A 1 196 LEU 196 203 203 LEU LEU A . n A 1 197 LYS 197 204 204 LYS LYS A . n A 1 198 LYS 198 205 205 LYS LYS A . n A 1 199 VAL 199 206 206 VAL VAL A . n A 1 200 LEU 200 207 207 LEU LEU A . n A 1 201 SER 201 208 208 SER SER A . n A 1 202 LYS 202 209 209 LYS LYS A . n A 1 203 GLY 203 210 210 GLY GLY A . n A 1 204 LEU 204 211 211 LEU LEU A . n A 1 205 GLU 205 212 212 GLU GLU A . n A 1 206 GLY 206 213 213 GLY GLY A . n A 1 207 TYR 207 214 214 TYR TYR A . n A 1 208 LEU 208 215 215 LEU LEU A . n A 1 209 ALA 209 216 216 ALA ALA A . n A 1 210 CYS 210 217 217 CYS CYS A . n A 1 211 ARG 211 218 218 ARG ARG A . n A 1 212 GLU 212 219 219 GLU GLU A . n A 1 213 LEU 213 220 220 LEU LEU A . n A 1 214 LEU 214 221 221 LEU LEU A . n A 1 215 GLU 215 222 222 GLU GLU A . n A 1 216 ARG 216 223 223 ARG ARG A . n A 1 217 PHE 217 224 224 PHE PHE A . n A 1 218 SER 218 225 225 SER SER A . n A 1 219 LYS 219 226 226 LYS LYS A . n A 1 220 VAL 220 227 227 VAL VAL A . n A 1 221 GLU 221 228 228 GLU GLU A . n A 1 222 SER 222 229 229 SER SER A . n A 1 223 LYS 223 230 230 LYS LYS A . n A 1 224 GLU 224 231 231 GLU GLU A . n A 1 225 PHE 225 232 232 PHE PHE A . n A 1 226 PHE 226 233 233 PHE PHE A . n A 1 227 ALA 227 234 234 ALA ALA A . n A 1 228 LEU 228 235 235 LEU LEU A . n A 1 229 PHE 229 236 236 PHE PHE A . n A 1 230 ASP 230 237 237 ASP ASP A . n A 1 231 GLN 231 238 238 GLN GLN A . n A 1 232 VAL 232 239 239 VAL VAL A . n A 1 233 THR 233 240 240 THR THR A . n A 1 234 ASN 234 241 241 ASN ASN A . n A 1 235 THR 235 242 242 THR THR A . n A 1 236 ILE 236 243 243 ILE ILE A . n A 1 237 THR 237 244 244 THR THR A . n A 1 238 GLY 238 245 245 GLY GLY A . n A 1 239 LYS 239 246 246 LYS LYS A . n A 1 240 ASP 240 247 247 ASP ASP A . n A 1 241 ALA 241 248 248 ALA ALA A . n A 1 242 PHE 242 249 249 PHE PHE A . n A 1 243 LEU 243 250 250 LEU LEU A . n A 1 244 LEU 244 251 251 LEU LEU A . n A 1 245 ILE 245 252 252 ILE ILE A . n A 1 246 GLN 246 253 253 GLN GLN A . n A 1 247 ARG 247 254 254 ARG ARG A . n A 1 248 LEU 248 255 255 LEU LEU A . n A 1 249 THR 249 256 256 THR THR A . n A 1 250 ARG 250 257 257 ARG ARG A . n A 1 251 ILE 251 258 258 ILE ILE A . n A 1 252 ILE 252 259 259 ILE ILE A . n A 1 253 LEU 253 260 260 LEU LEU A . n A 1 254 HIS 254 261 261 HIS HIS A . n A 1 255 GLU 255 262 262 GLU GLU A . n A 1 256 ASN 256 263 263 ASN ASN A . n A 1 257 THR 257 264 264 THR THR A . n A 1 258 TRP 258 265 265 TRP TRP A . n A 1 259 GLU 259 266 266 GLU GLU A . n A 1 260 SER 260 267 267 SER SER A . n A 1 261 VAL 261 268 268 VAL VAL A . n A 1 262 GLU 262 269 269 GLU GLU A . n A 1 263 ASP 263 270 270 ASP ASP A . n A 1 264 GLN 264 271 271 GLN GLN A . n A 1 265 LYS 265 272 272 LYS LYS A . n A 1 266 SER 266 273 273 SER SER A . n A 1 267 VAL 267 274 274 VAL VAL A . n A 1 268 SER 268 275 275 SER SER A . n A 1 269 PHE 269 276 276 PHE PHE A . n A 1 270 LEU 270 277 277 LEU LEU A . n A 1 271 ASP 271 278 278 ASP ASP A . n A 1 272 SER 272 279 279 SER SER A . n A 1 273 ILE 273 280 280 ILE ILE A . n A 1 274 LEU 274 281 281 LEU LEU A . n A 1 275 ARG 275 282 282 ARG ARG A . n A 1 276 VAL 276 283 283 VAL VAL A . n A 1 277 LYS 277 284 284 LYS LYS A . n A 1 278 ILE 278 285 285 ILE ILE A . n A 1 279 ALA 279 286 286 ALA ALA A . n A 1 280 ASN 280 287 287 ASN ASN A . n A 1 281 LEU 281 288 288 LEU LEU A . n A 1 282 ASN 282 289 289 ASN ASN A . n A 1 283 ASN 283 290 290 ASN ASN A . n A 1 284 LYS 284 291 291 LYS LYS A . n A 1 285 LEU 285 292 292 LEU LEU A . n A 1 286 THR 286 293 293 THR THR A . n A 1 287 LEU 287 294 294 LEU LEU A . n A 1 288 MSE 288 295 295 MSE MSE A . n A 1 289 ASN 289 296 296 ASN ASN A . n A 1 290 ILE 290 297 297 ILE ILE A . n A 1 291 LEU 291 298 298 LEU LEU A . n A 1 292 ALA 292 299 299 ALA ALA A . n A 1 293 ILE 293 300 300 ILE ILE A . n A 1 294 HIS 294 301 301 HIS HIS A . n A 1 295 ARG 295 302 302 ARG ARG A . n A 1 296 GLU 296 303 303 GLU GLU A . n A 1 297 ARG 297 304 304 ARG ARG A . n A 1 298 LYS 298 305 305 LYS LYS A . n A 1 299 ARG 299 306 306 ARG ARG A . n A 1 300 GLY 300 307 ? ? ? A . n A 1 301 VAL 301 308 ? ? ? A . n A 1 302 ASN 302 309 ? ? ? A . n A 1 303 ALA 303 310 ? ? ? A . n A 1 304 TRP 304 311 ? ? ? A . n A 1 305 SER 305 312 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA 1 2 2 NA NA A . C 3 UNL 1 1 1 UNL UNL A . D 4 ETX 1 3 3 ETX ETX A . E 4 ETX 1 4 4 ETX ETX A . F 5 HOH 1 313 5 HOH HOH A . F 5 HOH 2 314 6 HOH HOH A . F 5 HOH 3 315 7 HOH HOH A . F 5 HOH 4 316 8 HOH HOH A . F 5 HOH 5 317 9 HOH HOH A . F 5 HOH 6 318 10 HOH HOH A . F 5 HOH 7 319 11 HOH HOH A . F 5 HOH 8 320 12 HOH HOH A . F 5 HOH 9 321 13 HOH HOH A . F 5 HOH 10 322 14 HOH HOH A . F 5 HOH 11 323 15 HOH HOH A . F 5 HOH 12 324 16 HOH HOH A . F 5 HOH 13 325 17 HOH HOH A . F 5 HOH 14 326 18 HOH HOH A . F 5 HOH 15 327 19 HOH HOH A . F 5 HOH 16 328 20 HOH HOH A . F 5 HOH 17 329 21 HOH HOH A . F 5 HOH 18 330 22 HOH HOH A . F 5 HOH 19 331 23 HOH HOH A . F 5 HOH 20 332 24 HOH HOH A . F 5 HOH 21 333 25 HOH HOH A . F 5 HOH 22 334 26 HOH HOH A . F 5 HOH 23 335 27 HOH HOH A . F 5 HOH 24 336 28 HOH HOH A . F 5 HOH 25 337 29 HOH HOH A . F 5 HOH 26 338 30 HOH HOH A . F 5 HOH 27 339 31 HOH HOH A . F 5 HOH 28 340 33 HOH HOH A . F 5 HOH 29 341 34 HOH HOH A . F 5 HOH 30 342 35 HOH HOH A . F 5 HOH 31 343 36 HOH HOH A . F 5 HOH 32 344 37 HOH HOH A . F 5 HOH 33 345 38 HOH HOH A . F 5 HOH 34 346 39 HOH HOH A . F 5 HOH 35 347 40 HOH HOH A . F 5 HOH 36 348 42 HOH HOH A . F 5 HOH 37 349 44 HOH HOH A . F 5 HOH 38 350 45 HOH HOH A . F 5 HOH 39 351 46 HOH HOH A . F 5 HOH 40 352 47 HOH HOH A . F 5 HOH 41 353 48 HOH HOH A . F 5 HOH 42 354 49 HOH HOH A . F 5 HOH 43 355 50 HOH HOH A . F 5 HOH 44 356 51 HOH HOH A . F 5 HOH 45 357 52 HOH HOH A . F 5 HOH 46 358 53 HOH HOH A . F 5 HOH 47 359 54 HOH HOH A . F 5 HOH 48 360 55 HOH HOH A . F 5 HOH 49 361 56 HOH HOH A . F 5 HOH 50 362 57 HOH HOH A . F 5 HOH 51 363 58 HOH HOH A . F 5 HOH 52 364 59 HOH HOH A . F 5 HOH 53 365 60 HOH HOH A . F 5 HOH 54 366 61 HOH HOH A . F 5 HOH 55 367 62 HOH HOH A . F 5 HOH 56 368 63 HOH HOH A . F 5 HOH 57 369 64 HOH HOH A . F 5 HOH 58 370 65 HOH HOH A . F 5 HOH 59 371 66 HOH HOH A . F 5 HOH 60 372 67 HOH HOH A . F 5 HOH 61 373 68 HOH HOH A . F 5 HOH 62 374 69 HOH HOH A . F 5 HOH 63 375 70 HOH HOH A . F 5 HOH 64 376 71 HOH HOH A . F 5 HOH 65 377 72 HOH HOH A . F 5 HOH 66 378 73 HOH HOH A . F 5 HOH 67 379 74 HOH HOH A . F 5 HOH 68 380 75 HOH HOH A . F 5 HOH 69 381 76 HOH HOH A . F 5 HOH 70 382 78 HOH HOH A . F 5 HOH 71 383 79 HOH HOH A . F 5 HOH 72 384 80 HOH HOH A . F 5 HOH 73 385 81 HOH HOH A . F 5 HOH 74 386 82 HOH HOH A . F 5 HOH 75 387 83 HOH HOH A . F 5 HOH 76 388 84 HOH HOH A . F 5 HOH 77 389 85 HOH HOH A . F 5 HOH 78 390 86 HOH HOH A . F 5 HOH 79 391 87 HOH HOH A . F 5 HOH 80 392 88 HOH HOH A . F 5 HOH 81 393 89 HOH HOH A . F 5 HOH 82 394 90 HOH HOH A . F 5 HOH 83 395 91 HOH HOH A . F 5 HOH 84 396 92 HOH HOH A . F 5 HOH 85 397 93 HOH HOH A . F 5 HOH 86 398 94 HOH HOH A . F 5 HOH 87 399 95 HOH HOH A . F 5 HOH 88 400 96 HOH HOH A . F 5 HOH 89 401 97 HOH HOH A . F 5 HOH 90 402 98 HOH HOH A . F 5 HOH 91 403 99 HOH HOH A . F 5 HOH 92 404 100 HOH HOH A . F 5 HOH 93 405 101 HOH HOH A . F 5 HOH 94 406 102 HOH HOH A . F 5 HOH 95 407 103 HOH HOH A . F 5 HOH 96 408 104 HOH HOH A . F 5 HOH 97 409 105 HOH HOH A . F 5 HOH 98 410 106 HOH HOH A . F 5 HOH 99 411 107 HOH HOH A . F 5 HOH 100 412 108 HOH HOH A . F 5 HOH 101 413 109 HOH HOH A . F 5 HOH 102 414 110 HOH HOH A . F 5 HOH 103 415 112 HOH HOH A . F 5 HOH 104 416 113 HOH HOH A . F 5 HOH 105 417 114 HOH HOH A . F 5 HOH 106 418 116 HOH HOH A . F 5 HOH 107 419 117 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 94 A MSE 101 ? MET SELENOMETHIONINE 2 A MSE 184 A MSE 191 ? MET SELENOMETHIONINE 3 A MSE 288 A MSE 295 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-04-18 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Source and taxonomy' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_ref_seq_dif 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 19.2960 78.5452 27.1236 -0.0210 0.1935 -0.0947 -0.0383 -0.0224 0.0757 2.2739 6.0604 6.0805 3.3447 -0.0458 -2.5080 -0.4766 0.6166 -0.1401 0.8218 0.1320 -0.1455 -0.8650 0.0443 -1.0041 'X-RAY DIFFRACTION' 2 ? refined 22.3750 72.9649 39.6628 0.0123 0.0088 -0.0353 -0.0268 0.0039 -0.0152 2.9919 4.5978 4.9265 1.5443 -2.4187 -2.2967 -0.0930 0.0308 0.0622 -0.0827 0.0972 0.1339 0.1565 0.2259 -0.3391 'X-RAY DIFFRACTION' 3 ? refined 36.5658 63.0713 26.8708 0.2185 -0.0902 -0.0867 -0.0196 0.1473 -0.0095 3.7286 1.6663 0.7421 -1.5147 0.0920 0.2696 0.2961 -0.2409 -0.0552 0.1797 0.1402 -0.1179 -0.4440 0.3113 -0.1436 'X-RAY DIFFRACTION' 4 ? refined 44.1169 44.9327 36.3526 0.0163 -0.0564 -0.0097 0.0281 0.0464 -0.0088 2.4266 3.9158 1.8175 0.6897 -0.4104 0.1590 0.1276 0.0868 -0.2144 -0.0452 0.0343 0.1446 0.0263 -0.0776 -0.0887 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 4 A 22 ALL A 11 A 29 'X-RAY DIFFRACTION' ? 2 2 A 23 A 118 ALL A 30 A 125 'X-RAY DIFFRACTION' ? 3 3 A 119 A 190 ALL A 126 A 197 'X-RAY DIFFRACTION' ? 4 4 A 191 A 299 ALL A 198 A 306 'X-RAY DIFFRACTION' ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0005 ? ? 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 1 XSCALE . ? ? 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 2 PDB_EXTRACT 1.701 'Nov. 1, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 3 XDS . ? ? ? ? 'data reduction' ? ? ? 4 SHARP 'V. 1' ? ? ? ? phasing ? ? ? 5 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE: THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 9-312 OF THE TM0771 SEQUENCE. A SMALL AMOUNT OF PROTEIN WITH THE TAG UNCLEAVED REMAINED IN THE SAMPLE AFTER PURIFICATION. A SERIES OF DIFFERENT LENGTH N-TERMINAL TRUNCATIONS WERE TRIED TO IMPROVE DIFFRACTION QUALITY FROM THIS TARGET. THE CONSTRUCT WITH RESIDUES 1-8 ELIMINATED PRODUCED THE BEST DIFFRACTING CRYSTAL. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 24 ? ? -115.54 61.37 2 1 ASP A 63 ? ? -160.53 75.88 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 18 ? CD ? A ARG 11 CD 2 1 Y 1 A ARG 18 ? NE ? A ARG 11 NE 3 1 Y 1 A ARG 18 ? CZ ? A ARG 11 CZ 4 1 Y 1 A ARG 18 ? NH1 ? A ARG 11 NH1 5 1 Y 1 A ARG 18 ? NH2 ? A ARG 11 NH2 6 1 Y 1 A GLU 33 ? CG ? A GLU 26 CG 7 1 Y 1 A GLU 33 ? CD ? A GLU 26 CD 8 1 Y 1 A GLU 33 ? OE1 ? A GLU 26 OE1 9 1 Y 1 A GLU 33 ? OE2 ? A GLU 26 OE2 10 1 Y 1 A LYS 55 ? CE ? A LYS 48 CE 11 1 Y 1 A LYS 55 ? NZ ? A LYS 48 NZ 12 1 Y 1 A GLU 67 ? CG ? A GLU 60 CG 13 1 Y 1 A GLU 67 ? CD ? A GLU 60 CD 14 1 Y 1 A GLU 67 ? OE1 ? A GLU 60 OE1 15 1 Y 1 A GLU 67 ? OE2 ? A GLU 60 OE2 16 1 Y 1 A ASP 79 ? OD1 ? A ASP 72 OD1 17 1 Y 1 A ASP 79 ? OD2 ? A ASP 72 OD2 18 1 Y 1 A LYS 111 ? CG ? A LYS 104 CG 19 1 Y 1 A LYS 111 ? CD ? A LYS 104 CD 20 1 Y 1 A LYS 111 ? CE ? A LYS 104 CE 21 1 Y 1 A LYS 111 ? NZ ? A LYS 104 NZ 22 1 Y 1 A GLU 115 ? CB ? A GLU 108 CB 23 1 Y 1 A GLU 115 ? CG ? A GLU 108 CG 24 1 Y 1 A GLU 115 ? CD ? A GLU 108 CD 25 1 Y 1 A GLU 115 ? OE1 ? A GLU 108 OE1 26 1 Y 1 A GLU 115 ? OE2 ? A GLU 108 OE2 27 1 Y 1 A LEU 133 ? CD1 ? A LEU 126 CD1 28 1 Y 1 A LEU 133 ? CD2 ? A LEU 126 CD2 29 1 Y 1 A LYS 137 ? CE ? A LYS 130 CE 30 1 Y 1 A LYS 137 ? NZ ? A LYS 130 NZ 31 1 Y 1 A VAL 144 ? CG1 ? A VAL 137 CG1 32 1 Y 1 A VAL 144 ? CG2 ? A VAL 137 CG2 33 1 Y 1 A LYS 149 ? CG ? A LYS 142 CG 34 1 Y 1 A LYS 149 ? CD ? A LYS 142 CD 35 1 Y 1 A LYS 149 ? CE ? A LYS 142 CE 36 1 Y 1 A LYS 149 ? NZ ? A LYS 142 NZ 37 1 Y 1 A GLU 157 ? CG ? A GLU 150 CG 38 1 Y 1 A GLU 157 ? CD ? A GLU 150 CD 39 1 Y 1 A GLU 157 ? OE1 ? A GLU 150 OE1 40 1 Y 1 A GLU 157 ? OE2 ? A GLU 150 OE2 41 1 Y 1 A LYS 158 ? CE ? A LYS 151 CE 42 1 Y 1 A LYS 158 ? NZ ? A LYS 151 NZ 43 1 Y 1 A LYS 181 ? NZ ? A LYS 174 NZ 44 1 Y 1 A GLU 185 ? CG ? A GLU 178 CG 45 1 Y 1 A GLU 185 ? CD ? A GLU 178 CD 46 1 Y 1 A GLU 185 ? OE1 ? A GLU 178 OE1 47 1 Y 1 A GLU 185 ? OE2 ? A GLU 178 OE2 48 1 Y 1 A GLU 198 ? CD ? A GLU 191 CD 49 1 Y 1 A GLU 198 ? OE1 ? A GLU 191 OE1 50 1 Y 1 A GLU 198 ? OE2 ? A GLU 191 OE2 51 1 Y 1 A GLU 200 ? CD ? A GLU 193 CD 52 1 Y 1 A GLU 200 ? OE1 ? A GLU 193 OE1 53 1 Y 1 A GLU 200 ? OE2 ? A GLU 193 OE2 54 1 Y 1 A LYS 201 ? CE ? A LYS 194 CE 55 1 Y 1 A LYS 201 ? NZ ? A LYS 194 NZ 56 1 Y 1 A LYS 209 ? CG ? A LYS 202 CG 57 1 Y 1 A LYS 209 ? CD ? A LYS 202 CD 58 1 Y 1 A LYS 209 ? CE ? A LYS 202 CE 59 1 Y 1 A LYS 209 ? NZ ? A LYS 202 NZ 60 1 Y 1 A LYS 246 ? CG ? A LYS 239 CG 61 1 Y 1 A LYS 246 ? CD ? A LYS 239 CD 62 1 Y 1 A LYS 246 ? CE ? A LYS 239 CE 63 1 Y 1 A LYS 246 ? NZ ? A LYS 239 NZ 64 1 Y 1 A ARG 257 ? NH1 ? A ARG 250 NH1 65 1 Y 1 A ARG 257 ? NH2 ? A ARG 250 NH2 66 1 Y 1 A GLU 266 ? CB ? A GLU 259 CB 67 1 Y 1 A GLU 266 ? CG ? A GLU 259 CG 68 1 Y 1 A GLU 266 ? CD ? A GLU 259 CD 69 1 Y 1 A GLU 266 ? OE1 ? A GLU 259 OE1 70 1 Y 1 A GLU 266 ? OE2 ? A GLU 259 OE2 71 1 Y 1 A SER 267 ? CB ? A SER 260 CB 72 1 Y 1 A SER 267 ? OG ? A SER 260 OG 73 1 Y 1 A ARG 282 ? CZ ? A ARG 275 CZ 74 1 Y 1 A ARG 282 ? NH1 ? A ARG 275 NH1 75 1 Y 1 A ARG 282 ? NH2 ? A ARG 275 NH2 76 1 Y 1 A LYS 284 ? CD ? A LYS 277 CD 77 1 Y 1 A LYS 284 ? CE ? A LYS 277 CE 78 1 Y 1 A LYS 284 ? NZ ? A LYS 277 NZ 79 1 Y 1 A ARG 304 ? CZ ? A ARG 297 CZ 80 1 Y 1 A ARG 304 ? NH1 ? A ARG 297 NH1 81 1 Y 1 A ARG 304 ? NH2 ? A ARG 297 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 8 ? A GLY 1 2 1 Y 1 A ALA 9 ? A ALA 2 3 1 Y 1 A LYS 10 ? A LYS 3 4 1 Y 1 A GLY 307 ? A GLY 300 5 1 Y 1 A VAL 308 ? A VAL 301 6 1 Y 1 A ASN 309 ? A ASN 302 7 1 Y 1 A ALA 310 ? A ALA 303 8 1 Y 1 A TRP 311 ? A TRP 304 9 1 Y 1 A SER 312 ? A SER 305 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 'UNKNOWN LIGAND' UNL 4 2-ETHOXYETHANOL ETX 5 water HOH #