HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 10-APR-06 2GNR OBSLTE 01-SEP-09 2GNR 3IRB TITLE CRYSTAL STRUCTURE OF A PROTEIN WITH UNKNOWN FUNCTION FROM TITLE 2 DUF35 FAMILY (13815350) FROM SULFOLOBUS SOLFATARICUS AT TITLE 3 1.80 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONSERVED HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS P2; SOURCE 3 ORGANISM_TAXID: 273057; SOURCE 4 STRAIN: P2; SOURCE 5 GENE: 13815350; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS 13815350, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 3 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 3 01-SEP-09 2GNR 1 OBSLTE REVDAT 2 24-FEB-09 2GNR 1 VERSN REVDAT 1 13-JUN-06 2GNR 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF CONSERVED HYPOTHETICAL PROTEIN JRNL TITL 2 (13815350) FROM SULFOLOBUS SOLFATARICUS AT 1.80 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 31321 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1559 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2158 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.16 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE SET COUNT : 95 REMARK 3 BIN FREE R VALUE : 0.2550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2177 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 223 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.51000 REMARK 3 B22 (A**2) : 0.51000 REMARK 3 B33 (A**2) : -1.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.114 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.114 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.079 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.539 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2269 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3096 ; 1.440 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 288 ; 5.787 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 108 ;32.125 ;24.444 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 358 ;12.064 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;18.220 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 331 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1763 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 981 ; 0.204 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1552 ; 0.312 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 194 ; 0.180 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 65 ; 0.215 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 20 ; 0.158 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1418 ; 2.178 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2231 ; 3.012 ; 5.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 983 ; 5.669 ; 8.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 854 ; 7.851 ;11.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 15 A 144 REMARK 3 ORIGIN FOR THE GROUP (A): 10.2121 30.0780 13.4047 REMARK 3 T TENSOR REMARK 3 T11: -0.0616 T22: -0.0751 REMARK 3 T33: -0.0320 T12: -0.0028 REMARK 3 T13: -0.0052 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.2819 L22: 1.4151 REMARK 3 L33: 1.2614 L12: -0.2499 REMARK 3 L13: 0.0915 L23: -0.4264 REMARK 3 S TENSOR REMARK 3 S11: 0.0010 S12: 0.0446 S13: -0.0574 REMARK 3 S21: -0.0316 S22: -0.0281 S23: -0.1141 REMARK 3 S31: -0.0379 S32: 0.1198 S33: 0.0270 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 17 B 144 REMARK 3 ORIGIN FOR THE GROUP (A): -1.8135 19.7242 25.9989 REMARK 3 T TENSOR REMARK 3 T11: -0.0181 T22: -0.0159 REMARK 3 T33: -0.0230 T12: -0.0448 REMARK 3 T13: -0.0050 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 0.4385 L22: 0.7179 REMARK 3 L33: 1.9359 L12: 0.0183 REMARK 3 L13: 0.4315 L23: 0.0256 REMARK 3 S TENSOR REMARK 3 S11: -0.0263 S12: 0.0167 S13: -0.0331 REMARK 3 S21: -0.0015 S22: 0.0353 S23: 0.0464 REMARK 3 S31: 0.1280 S32: -0.1397 S33: -0.0090 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 3. TWO ZINC IONS ADDED BASED ON HOMOLOGY WITH REMARK 3 CONSERVED RUBIDOXIN DOMAIN, CONFIRMED VIA EXCITATION SCAN REMARK 3 ANALYSIS. 4. ACY AND SO4 ADDED BASED ON ANALYSIS OF REMARK 3 CRYSTALLIZATION CONDITIONS. 5. ATOM RECORD CONTAINS RESIDUAL B REMARK 3 FACTORS ONLY. REMARK 4 REMARK 4 2GNR COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-APR-06. REMARK 100 THE RCSB ID CODE IS RCSB037337. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979386, 0.918370, 0.979170 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 OPTICS : FLAT MIRROR (VERTICAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31365 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 26.929 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 7.037 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.5100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.79500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0M (NH4)2SO4, 0.1M ACETATE, PH REMARK 280 4.6, VAPOR DIFFUSION, SITTING DROP, NANODROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+3/4 REMARK 290 8555 -Y,-X,-Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.68500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.84250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 86.52750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 57.68500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 86.52750 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 28.84250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -84.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -196.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 75.16000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 57.68500 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -176.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 TRP A 3 REMARK 465 GLU A 4 REMARK 465 LYS A 5 REMARK 465 SER A 6 REMARK 465 GLY A 7 REMARK 465 GLY B 0 REMARK 465 MSE B 1 REMARK 465 SER B 2 REMARK 465 TRP B 3 REMARK 465 GLU B 4 REMARK 465 LYS B 5 REMARK 465 SER B 6 REMARK 465 GLY B 7 REMARK 465 LYS B 8 REMARK 465 GLU B 9 REMARK 465 VAL B 28 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 8 CG CD CE NZ REMARK 470 ARG A 14 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 33 CG CD OE1 OE2 REMARK 470 LYS A 40 CD CE NZ REMARK 470 LYS A 69 CD CE NZ REMARK 470 LYS A 97 CD CE NZ REMARK 470 LYS A 129 CG CD CE NZ REMARK 470 LYS A 131 CD CE NZ REMARK 470 GLN A 136 CD OE1 NE2 REMARK 470 LYS A 142 CE NZ REMARK 470 GLU B 33 CD OE1 OE2 REMARK 470 LYS B 40 CD CE NZ REMARK 470 LYS B 43 CE NZ REMARK 470 LYS B 69 CD CE NZ REMARK 470 LYS B 125 CD CE NZ REMARK 470 LYS B 129 CD CE NZ REMARK 470 LYS B 131 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 300 O HOH B 314 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 77 99.99 -67.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 200 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 63 SG REMARK 620 2 CYS A 66 SG 113.8 REMARK 620 3 CYS A 49 SG 109.3 112.9 REMARK 620 4 CYS A 52 SG 111.7 102.5 106.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 200 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 52 SG REMARK 620 2 CYS B 63 SG 109.1 REMARK 620 3 CYS B 66 SG 104.9 115.1 REMARK 620 4 CYS B 49 SG 110.8 105.1 112.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 200 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 200 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 201 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 202 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 202 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 204 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY B 203 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY B 204 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 205 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 361217 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV REMARK 999 PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE REMARK 999 TARGET SEQUENCE. DBREF 2GNR A 1 144 GB 13815350 AAK42248 1 144 DBREF 2GNR B 1 144 GB 13815350 AAK42248 1 144 SEQADV 2GNR GLY A 0 GB 13815350 LEADER SEQUENCE SEQADV 2GNR MSE A 1 GB 13815350 MET 1 MODIFIED RESIDUE SEQADV 2GNR MSE A 19 GB 13815350 MET 19 MODIFIED RESIDUE SEQADV 2GNR GLY B 0 GB 13815350 LEADER SEQUENCE SEQADV 2GNR MSE B 1 GB 13815350 MET 1 MODIFIED RESIDUE SEQADV 2GNR MSE B 19 GB 13815350 MET 19 MODIFIED RESIDUE SEQRES 1 A 145 GLY MSE SER TRP GLU LYS SER GLY LYS GLU GLY SER LEU SEQRES 2 A 145 LEU ARG TRP TYR ASP VAL MSE GLU ALA GLU ARG TYR GLU SEQRES 3 A 145 TYR THR VAL GLY PRO ALA GLY GLU GLN PHE PHE ASN GLY SEQRES 4 A 145 LEU LYS GLN ASN LYS ILE ILE GLY SER LYS CYS SER LYS SEQRES 5 A 145 CYS GLY ARG ILE PHE VAL PRO ALA ARG SER TYR CYS GLU SEQRES 6 A 145 HIS CYS PHE VAL LYS ILE GLU ASN TYR VAL GLU ILE ASN SEQRES 7 A 145 LYS ASP GLU ALA TYR VAL ASP SER TYR THR ILE ILE TYR SEQRES 8 A 145 ASN ASP ASP GLU GLY ASN LYS LEU ALA GLN PRO VAL TYR SEQRES 9 A 145 ILE ALA LEU ILE ARG PHE PRO ASN ILE GLU GLY GLY LEU SEQRES 10 A 145 LEU CYS TYR ALA GLU GLY ASN VAL LYS VAL GLY ALA LYS SEQRES 11 A 145 ALA LYS ILE LEU SER PHE GLN TRP PRO LEU ARG VAL LYS SEQRES 12 A 145 VAL ASP SEQRES 1 B 145 GLY MSE SER TRP GLU LYS SER GLY LYS GLU GLY SER LEU SEQRES 2 B 145 LEU ARG TRP TYR ASP VAL MSE GLU ALA GLU ARG TYR GLU SEQRES 3 B 145 TYR THR VAL GLY PRO ALA GLY GLU GLN PHE PHE ASN GLY SEQRES 4 B 145 LEU LYS GLN ASN LYS ILE ILE GLY SER LYS CYS SER LYS SEQRES 5 B 145 CYS GLY ARG ILE PHE VAL PRO ALA ARG SER TYR CYS GLU SEQRES 6 B 145 HIS CYS PHE VAL LYS ILE GLU ASN TYR VAL GLU ILE ASN SEQRES 7 B 145 LYS ASP GLU ALA TYR VAL ASP SER TYR THR ILE ILE TYR SEQRES 8 B 145 ASN ASP ASP GLU GLY ASN LYS LEU ALA GLN PRO VAL TYR SEQRES 9 B 145 ILE ALA LEU ILE ARG PHE PRO ASN ILE GLU GLY GLY LEU SEQRES 10 B 145 LEU CYS TYR ALA GLU GLY ASN VAL LYS VAL GLY ALA LYS SEQRES 11 B 145 ALA LYS ILE LEU SER PHE GLN TRP PRO LEU ARG VAL LYS SEQRES 12 B 145 VAL ASP MODRES 2GNR MSE A 19 MET SELENOMETHIONINE MODRES 2GNR MSE B 19 MET SELENOMETHIONINE HET MSE A 19 8 HET MSE B 19 8 HET ZN A 200 1 HET ZN B 200 1 HET SO4 A 201 5 HET SO4 B 201 5 HET SO4 A 202 5 HET SO4 A 203 5 HET SO4 B 202 5 HET ACY A 204 4 HET ACY B 203 4 HET ACY B 204 4 HET ACY A 205 4 HETNAM MSE SELENOMETHIONINE HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION HETNAM ACY ACETIC ACID FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 3 ZN 2(ZN 2+) FORMUL 5 SO4 5(O4 S 2-) FORMUL 10 ACY 4(C2 H4 O2) FORMUL 14 HOH *207(H2 O) HELIX 1 1 GLY A 10 VAL A 28 1 19 HELIX 2 2 VAL A 28 GLN A 41 1 14 HELIX 3 3 ASN A 77 ALA A 81 5 5 HELIX 4 4 SER B 11 GLU B 25 1 15 HELIX 5 5 GLY B 29 GLN B 41 1 13 HELIX 6 6 ASN B 77 ALA B 81 5 5 SHEET 1 A 4 ASN A 72 GLU A 75 0 SHEET 2 A 4 ILE A 45 LYS A 48 -1 N GLY A 46 O VAL A 74 SHEET 3 A 4 ILE A 55 VAL A 57 -1 O PHE A 56 N SER A 47 SHEET 4 A 4 GLU A 113 GLY A 114 1 O GLU A 113 N ILE A 55 SHEET 1 B 2 TYR A 62 CYS A 63 0 SHEET 2 B 2 VAL A 68 LYS A 69 -1 O VAL A 68 N CYS A 63 SHEET 1 C 5 TYR A 82 ASN A 91 0 SHEET 2 C 5 LYS A 97 ARG A 108 -1 O LEU A 106 N ASP A 84 SHEET 3 C 5 LEU A 116 GLY A 122 -1 O LEU A 116 N ILE A 107 SHEET 4 C 5 ARG A 140 VAL A 143 1 O VAL A 141 N TYR A 119 SHEET 5 C 5 LYS A 131 SER A 134 -1 N LYS A 131 O LYS A 142 SHEET 1 D 3 ILE B 55 PHE B 56 0 SHEET 2 D 3 ILE B 44 LYS B 48 -1 N SER B 47 O PHE B 56 SHEET 3 D 3 ASN B 72 ILE B 76 -1 O VAL B 74 N GLY B 46 SHEET 1 E 5 TYR B 82 ASN B 91 0 SHEET 2 E 5 LYS B 97 ARG B 108 -1 O LEU B 98 N TYR B 90 SHEET 3 E 5 LEU B 116 GLY B 122 -1 O CYS B 118 N ALA B 105 SHEET 4 E 5 ARG B 140 VAL B 143 1 O VAL B 143 N GLU B 121 SHEET 5 E 5 LYS B 131 SER B 134 -1 N LEU B 133 O ARG B 140 LINK C VAL A 18 N MSE A 19 1555 1555 1.32 LINK C MSE A 19 N GLU A 20 1555 1555 1.32 LINK ZN ZN A 200 SG CYS A 63 1555 1555 2.41 LINK ZN ZN A 200 SG CYS A 66 1555 1555 2.34 LINK ZN ZN A 200 SG CYS A 49 1555 1555 2.34 LINK ZN ZN A 200 SG CYS A 52 1555 1555 2.36 LINK C VAL B 18 N MSE B 19 1555 1555 1.33 LINK C MSE B 19 N GLU B 20 1555 1555 1.33 LINK ZN ZN B 200 SG CYS B 52 1555 1555 2.33 LINK ZN ZN B 200 SG CYS B 63 1555 1555 2.35 LINK ZN ZN B 200 SG CYS B 66 1555 1555 2.33 LINK ZN ZN B 200 SG CYS B 49 1555 1555 2.31 CISPEP 1 VAL A 57 PRO A 58 0 -9.35 CISPEP 2 TRP A 137 PRO A 138 0 -8.06 CISPEP 3 VAL B 57 PRO B 58 0 -11.82 CISPEP 4 TRP B 137 PRO B 138 0 0.76 SITE 1 AC1 4 CYS A 49 CYS A 52 CYS A 63 CYS A 66 SITE 1 AC2 4 CYS B 49 CYS B 52 CYS B 63 CYS B 66 SITE 1 AC3 6 ILE A 89 TYR A 90 ASN A 91 LYS A 125 SITE 2 AC3 6 HOH A 270 HOH A 277 SITE 1 AC4 8 GLY B 29 PRO B 30 ALA B 31 GLY B 32 SITE 2 AC4 8 ARG B 60 SER B 61 HOH B 233 HOH B 266 SITE 1 AC5 5 SER A 134 ARG A 140 GLY B 10 SER B 11 SITE 2 AC5 5 ARG B 14 SITE 1 AC6 6 ASP A 84 ARG A 108 HOH A 221 HOH A 283 SITE 2 AC6 6 ARG B 54 HIS B 65 SITE 1 AC7 4 TYR B 86 LYS B 125 VAL B 126 HOH B 296 SITE 1 AC8 3 ARG A 60 HOH A 264 ARG B 108 SITE 1 AC9 2 HOH A 251 HOH A 257 SITE 1 BC1 5 PRO A 30 SER A 61 SER B 85 TYR B 86 SITE 2 BC1 5 VAL B 126 SITE 1 BC2 5 TYR A 86 ILE A 88 TYR A 90 TYR A 103 SITE 2 BC2 5 VAL A 124 CRYST1 75.160 75.160 115.370 90.00 90.00 90.00 P 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013305 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013305 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008668 0.00000