data_2GO8 # _entry.id 2GO8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2GO8 RCSB RCSB037354 WWPDB D_1000037354 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id sr435 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 2GO8 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-04-12 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Benach, J.' 1 'Su, M.' 2 'Jayaraman, S.' 3 'Fang, Y.' 4 'Xiao, R.' 5 'Ma, L.-C.' 6 'Cunningham, K.' 7 'Wang, D.' 8 'Acton, T.B.' 9 'Montelione, G.T.' 10 'Tong, L.' 11 'Hunt, J.F.' 12 'Northeast Structural Genomics Consortium (NESG)' 13 # _citation.id primary _citation.title 'Crystal structure of YQJZ_BACSU from Bacillus subtilis. Northeast Structural Genomics TARGET SR435' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Benach, J.' 1 primary 'Su, M.' 2 primary 'Jayaraman, S.' 3 primary 'Fang, Y.' 4 primary 'Xiao, R.' 5 primary 'Ma, L.-C.' 6 primary 'Cunningham, K.' 7 primary 'Wang, D.' 8 primary 'Acton, T.B.' 9 primary 'Montelione, G.T.' 10 primary 'Tong, L.' 11 primary 'Hunt, J.F.' 12 # _cell.entry_id 2GO8 _cell.length_a 53.076 _cell.length_b 59.650 _cell.length_c 73.400 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2GO8 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical protein yqjZ' 14324.112 1 ? ? ? ? 2 water nat water 18.015 136 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)(MSE)DFLSKTPEPPYYAVIFSSVKSENDTGYGETAER(MSE)VSLAADQPGFLGVESVREADGRGITVSYWDS (MSE)DAINHWRHHTEHQAAKEKGRSVWYESYAVRVAKVDRQRLFQENTNDLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MMDFLSKTPEPPYYAVIFSSVKSENDTGYGETAERMVSLAADQPGFLGVESVREADGRGITVSYWDSMDAINHWRHHTEH QAAKEKGRSVWYESYAVRVAKVDRQRLFQENTNDLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier sr435 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 MSE n 1 3 ASP n 1 4 PHE n 1 5 LEU n 1 6 SER n 1 7 LYS n 1 8 THR n 1 9 PRO n 1 10 GLU n 1 11 PRO n 1 12 PRO n 1 13 TYR n 1 14 TYR n 1 15 ALA n 1 16 VAL n 1 17 ILE n 1 18 PHE n 1 19 SER n 1 20 SER n 1 21 VAL n 1 22 LYS n 1 23 SER n 1 24 GLU n 1 25 ASN n 1 26 ASP n 1 27 THR n 1 28 GLY n 1 29 TYR n 1 30 GLY n 1 31 GLU n 1 32 THR n 1 33 ALA n 1 34 GLU n 1 35 ARG n 1 36 MSE n 1 37 VAL n 1 38 SER n 1 39 LEU n 1 40 ALA n 1 41 ALA n 1 42 ASP n 1 43 GLN n 1 44 PRO n 1 45 GLY n 1 46 PHE n 1 47 LEU n 1 48 GLY n 1 49 VAL n 1 50 GLU n 1 51 SER n 1 52 VAL n 1 53 ARG n 1 54 GLU n 1 55 ALA n 1 56 ASP n 1 57 GLY n 1 58 ARG n 1 59 GLY n 1 60 ILE n 1 61 THR n 1 62 VAL n 1 63 SER n 1 64 TYR n 1 65 TRP n 1 66 ASP n 1 67 SER n 1 68 MSE n 1 69 ASP n 1 70 ALA n 1 71 ILE n 1 72 ASN n 1 73 HIS n 1 74 TRP n 1 75 ARG n 1 76 HIS n 1 77 HIS n 1 78 THR n 1 79 GLU n 1 80 HIS n 1 81 GLN n 1 82 ALA n 1 83 ALA n 1 84 LYS n 1 85 GLU n 1 86 LYS n 1 87 GLY n 1 88 ARG n 1 89 SER n 1 90 VAL n 1 91 TRP n 1 92 TYR n 1 93 GLU n 1 94 SER n 1 95 TYR n 1 96 ALA n 1 97 VAL n 1 98 ARG n 1 99 VAL n 1 100 ALA n 1 101 LYS n 1 102 VAL n 1 103 ASP n 1 104 ARG n 1 105 GLN n 1 106 ARG n 1 107 LEU n 1 108 PHE n 1 109 GLN n 1 110 GLU n 1 111 ASN n 1 112 THR n 1 113 ASN n 1 114 ASP n 1 115 LEU n 1 116 GLU n 1 117 HIS n 1 118 HIS n 1 119 HIS n 1 120 HIS n 1 121 HIS n 1 122 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bacillus _entity_src_gen.pdbx_gene_src_gene yqjZ _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1423 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)+ Magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pet21 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YQJZ_BACSU _struct_ref.pdbx_db_accession P54563 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2GO8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 114 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P54563 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 114 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 114 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2GO8 MSE A 1 ? UNP P54563 MET 1 'MODIFIED RESIDUE' 1 1 1 2GO8 MSE A 2 ? UNP P54563 MET 2 'MODIFIED RESIDUE' 2 2 1 2GO8 MSE A 36 ? UNP P54563 MET 36 'MODIFIED RESIDUE' 36 3 1 2GO8 MSE A 68 ? UNP P54563 MET 68 'MODIFIED RESIDUE' 68 4 1 2GO8 LEU A 115 ? UNP P54563 ? ? 'CLONING ARTIFACT' 115 5 1 2GO8 GLU A 116 ? UNP P54563 ? ? 'CLONING ARTIFACT' 116 6 1 2GO8 HIS A 117 ? UNP P54563 ? ? 'EXPRESSION TAG' 117 7 1 2GO8 HIS A 118 ? UNP P54563 ? ? 'EXPRESSION TAG' 118 8 1 2GO8 HIS A 119 ? UNP P54563 ? ? 'EXPRESSION TAG' 119 9 1 2GO8 HIS A 120 ? UNP P54563 ? ? 'EXPRESSION TAG' 120 10 1 2GO8 HIS A 121 ? UNP P54563 ? ? 'EXPRESSION TAG' 121 11 1 2GO8 HIS A 122 ? UNP P54563 ? ? 'EXPRESSION TAG' 122 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2GO8 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.19 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 39.33 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '20% PEG400, 100mM MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 ? ? 1 3 ? ? 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2006-03-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9791 1.0 2 0.9794 1.0 3 0.9678 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9791, 0.9794, 0.9678' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A # _reflns.entry_id 2GO8 _reflns.d_resolution_high 2.100 _reflns.d_resolution_low 20.000 _reflns.number_obs 13100 _reflns.pdbx_Rmerge_I_obs 0.105 _reflns.pdbx_netI_over_sigmaI 18.500 _reflns.pdbx_chi_squared 1.042 _reflns.pdbx_redundancy 8.100 _reflns.percent_possible_obs 96.900 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3 _reflns.number_all 13100 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.15 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs 903 _reflns_shell.Rmerge_I_obs 0.353 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 1.145 _reflns_shell.pdbx_redundancy 8.10 _reflns_shell.percent_possible_obs 100.00 _reflns_shell.number_unique_all ? _reflns_shell.percent_possible_all 100 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2GO8 _refine.ls_d_res_high 2.300 _refine.ls_d_res_low 20.000 _refine.pdbx_ls_sigma_F 2 _refine.ls_percent_reflns_obs 89.600 _refine.ls_number_reflns_obs 8962 _refine.ls_R_factor_R_work 0.23 _refine.ls_R_factor_R_free 0.255 _refine.ls_percent_reflns_R_free 8.700 _refine.ls_number_reflns_R_free 874 _refine.B_iso_mean 42.641 _refine.solvent_model_param_bsol 64.176 _refine.aniso_B[1][1] -23.484 _refine.aniso_B[2][2] 12.426 _refine.aniso_B[3][3] 11.058 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.pdbx_method_to_determine_struct MAD _refine.overall_FOM_work_R_set 0.834 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 8962 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 717 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 136 _refine_hist.number_atoms_total 853 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 20.000 # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.300 2.350 17 . 445 . 0.272 0.305 . 51 . . 496 . 'X-RAY DIFFRACTION' 2.350 2.400 17 . 430 . 0.234 0.251 . 31 . . 461 . 'X-RAY DIFFRACTION' 2.400 2.450 17 . 465 . 0.215 0.225 . 59 . . 524 . 'X-RAY DIFFRACTION' 2.450 2.510 17 . 484 . 0.216 0.245 . 47 . . 531 . 'X-RAY DIFFRACTION' 2.510 2.580 17 . 479 . 0.229 0.287 . 50 . . 529 . 'X-RAY DIFFRACTION' 2.580 2.660 17 . 493 . 0.274 0.299 . 58 . . 551 . 'X-RAY DIFFRACTION' 2.660 2.740 17 . 500 . 0.247 0.28 . 50 . . 550 . 'X-RAY DIFFRACTION' 2.740 2.840 17 . 520 . 0.252 0.278 . 47 . . 567 . 'X-RAY DIFFRACTION' 2.840 2.960 17 . 498 . 0.237 0.284 . 52 . . 550 . 'X-RAY DIFFRACTION' 2.960 3.090 17 . 519 . 0.25 0.367 . 62 . . 581 . 'X-RAY DIFFRACTION' 3.090 3.250 17 . 483 . 0.189 0.232 . 77 . . 560 . 'X-RAY DIFFRACTION' 3.250 3.450 17 . 524 . 0.219 0.208 . 47 . . 571 . 'X-RAY DIFFRACTION' 3.450 3.720 17 . 320 . 0.224 0.245 . 35 . . 355 . 'X-RAY DIFFRACTION' 3.720 4.090 17 . 403 . 0.201 0.315 . 50 . . 453 . 'X-RAY DIFFRACTION' 4.090 4.680 17 . 530 . 0.183 0.169 . 49 . . 579 . 'X-RAY DIFFRACTION' 4.680 5.870 17 . 516 . 0.229 0.251 . 59 . . 575 . 'X-RAY DIFFRACTION' 5.870 20.000 17 . 479 . 0.313 0.273 . 50 . . 529 . 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param ? 'X-RAY DIFFRACTION' 2 water_rep.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 2GO8 _struct.title 'Crystal structure of YQJZ_BACSU FROM Bacillus subtilis. Northeast structural genomics TARGET SR435' _struct.pdbx_descriptor 'Hypothetical protein yqjZ' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2GO8 _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;SR435, protein structure, Structural Genomics, PSI, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ;The second part of the biological assembly is generated by: -x, y, -z+1/2 and the translation (1 0 0) ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 30 ? GLN A 43 ? GLY A 30 GLN A 43 1 ? 14 HELX_P HELX_P2 2 SER A 67 ? THR A 78 ? SER A 67 THR A 78 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ARG 35 C ? ? ? 1_555 A MSE 36 N ? ? A ARG 35 A MSE 36 1_555 ? ? ? ? ? ? ? 1.325 ? covale2 covale ? ? A MSE 36 C ? ? ? 1_555 A VAL 37 N ? ? A MSE 36 A VAL 37 1_555 ? ? ? ? ? ? ? 1.332 ? covale3 covale ? ? A SER 67 C ? ? ? 1_555 A MSE 68 N ? ? A SER 67 A MSE 68 1_555 ? ? ? ? ? ? ? 1.319 ? covale4 covale ? ? A MSE 68 C ? ? ? 1_555 A ASP 69 N ? ? A MSE 68 A ASP 69 1_555 ? ? ? ? ? ? ? 1.330 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 11 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 11 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 12 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 12 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.12 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 46 ? ARG A 53 ? PHE A 46 ARG A 53 A 2 ARG A 58 ? TRP A 65 ? ARG A 58 TRP A 65 A 3 TYR A 13 ? VAL A 21 ? TYR A 13 VAL A 21 A 4 SER A 94 ? VAL A 102 ? SER A 94 VAL A 102 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 47 ? N LEU A 47 O TYR A 64 ? O TYR A 64 A 2 3 O TRP A 65 ? O TRP A 65 N TYR A 14 ? N TYR A 14 A 3 4 N ILE A 17 ? N ILE A 17 O ARG A 98 ? O ARG A 98 # _atom_sites.entry_id 2GO8 _atom_sites.fract_transf_matrix[1][1] 0.018841 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016764 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013624 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 MSE 2 2 ? ? ? A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 PRO 12 12 12 PRO PRO A . n A 1 13 TYR 13 13 13 TYR TYR A . n A 1 14 TYR 14 14 14 TYR TYR A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 PHE 18 18 18 PHE PHE A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 GLU 24 24 ? ? ? A . n A 1 25 ASN 25 25 ? ? ? A . n A 1 26 ASP 26 26 ? ? ? A . n A 1 27 THR 27 27 ? ? ? A . n A 1 28 GLY 28 28 ? ? ? A . n A 1 29 TYR 29 29 ? ? ? A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 MSE 36 36 36 MSE MSE A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 GLN 43 43 43 GLN GLN A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 TYR 64 64 64 TYR TYR A . n A 1 65 TRP 65 65 65 TRP TRP A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 MSE 68 68 68 MSE MSE A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 ASN 72 72 72 ASN ASN A . n A 1 73 HIS 73 73 73 HIS HIS A . n A 1 74 TRP 74 74 74 TRP TRP A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 HIS 76 76 76 HIS HIS A . n A 1 77 HIS 77 77 77 HIS HIS A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 GLU 79 79 ? ? ? A . n A 1 80 HIS 80 80 ? ? ? A . n A 1 81 GLN 81 81 ? ? ? A . n A 1 82 ALA 82 82 ? ? ? A . n A 1 83 ALA 83 83 ? ? ? A . n A 1 84 LYS 84 84 ? ? ? A . n A 1 85 GLU 85 85 ? ? ? A . n A 1 86 LYS 86 86 ? ? ? A . n A 1 87 GLY 87 87 ? ? ? A . n A 1 88 ARG 88 88 ? ? ? A . n A 1 89 SER 89 89 ? ? ? A . n A 1 90 VAL 90 90 ? ? ? A . n A 1 91 TRP 91 91 ? ? ? A . n A 1 92 TYR 92 92 92 TYR TYR A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 TYR 95 95 95 TYR TYR A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 ARG 104 104 104 ARG ARG A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 PHE 108 108 108 PHE PHE A . n A 1 109 GLN 109 109 109 GLN GLN A . n A 1 110 GLU 110 110 110 GLU GLU A . n A 1 111 ASN 111 111 ? ? ? A . n A 1 112 THR 112 112 ? ? ? A . n A 1 113 ASN 113 113 ? ? ? A . n A 1 114 ASP 114 114 ? ? ? A . n A 1 115 LEU 115 115 ? ? ? A . n A 1 116 GLU 116 116 ? ? ? A . n A 1 117 HIS 117 117 ? ? ? A . n A 1 118 HIS 118 118 ? ? ? A . n A 1 119 HIS 119 119 ? ? ? A . n A 1 120 HIS 120 120 ? ? ? A . n A 1 121 HIS 121 121 ? ? ? A . n A 1 122 HIS 122 122 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 3001 3001 HOH HOH A . B 2 HOH 2 3002 3002 HOH HOH A . B 2 HOH 3 3003 3003 HOH HOH A . B 2 HOH 4 3005 3005 HOH HOH A . B 2 HOH 5 3007 3007 HOH HOH A . B 2 HOH 6 3008 3008 HOH HOH A . B 2 HOH 7 3009 3009 HOH HOH A . B 2 HOH 8 3011 3011 HOH HOH A . B 2 HOH 9 3014 3014 HOH HOH A . B 2 HOH 10 3015 3015 HOH HOH A . B 2 HOH 11 3016 3016 HOH HOH A . B 2 HOH 12 3017 3017 HOH HOH A . B 2 HOH 13 3019 3019 HOH HOH A . B 2 HOH 14 3022 3022 HOH HOH A . B 2 HOH 15 3023 3023 HOH HOH A . B 2 HOH 16 3025 3025 HOH HOH A . B 2 HOH 17 3026 3026 HOH HOH A . B 2 HOH 18 3028 3028 HOH HOH A . B 2 HOH 19 3032 3032 HOH HOH A . B 2 HOH 20 3033 3033 HOH HOH A . B 2 HOH 21 3034 3034 HOH HOH A . B 2 HOH 22 3035 3035 HOH HOH A . B 2 HOH 23 3036 3036 HOH HOH A . B 2 HOH 24 3037 3037 HOH HOH A . B 2 HOH 25 3042 3042 HOH HOH A . B 2 HOH 26 3043 3043 HOH HOH A . B 2 HOH 27 3047 3047 HOH HOH A . B 2 HOH 28 3053 3053 HOH HOH A . B 2 HOH 29 3057 3057 HOH HOH A . B 2 HOH 30 3064 3064 HOH HOH A . B 2 HOH 31 3065 3065 HOH HOH A . B 2 HOH 32 3071 3071 HOH HOH A . B 2 HOH 33 3080 3080 HOH HOH A . B 2 HOH 34 3082 3082 HOH HOH A . B 2 HOH 35 3083 3083 HOH HOH A . B 2 HOH 36 3084 3084 HOH HOH A . B 2 HOH 37 3089 3089 HOH HOH A . B 2 HOH 38 3127 3127 HOH HOH A . B 2 HOH 39 3129 3129 HOH HOH A . B 2 HOH 40 3131 3131 HOH HOH A . B 2 HOH 41 3133 3133 HOH HOH A . B 2 HOH 42 3136 3136 HOH HOH A . B 2 HOH 43 3138 3138 HOH HOH A . B 2 HOH 44 3144 3144 HOH HOH A . B 2 HOH 45 3145 3145 HOH HOH A . B 2 HOH 46 3149 3149 HOH HOH A . B 2 HOH 47 3151 3151 HOH HOH A . B 2 HOH 48 3160 3160 HOH HOH A . B 2 HOH 49 3162 3162 HOH HOH A . B 2 HOH 50 3165 3165 HOH HOH A . B 2 HOH 51 3168 3168 HOH HOH A . B 2 HOH 52 3172 3172 HOH HOH A . B 2 HOH 53 3180 3180 HOH HOH A . B 2 HOH 54 3181 3181 HOH HOH A . B 2 HOH 55 3196 3196 HOH HOH A . B 2 HOH 56 3200 3200 HOH HOH A . B 2 HOH 57 3201 3201 HOH HOH A . B 2 HOH 58 3202 3202 HOH HOH A . B 2 HOH 59 3203 3203 HOH HOH A . B 2 HOH 60 3204 3204 HOH HOH A . B 2 HOH 61 3206 3206 HOH HOH A . B 2 HOH 62 3215 3215 HOH HOH A . B 2 HOH 63 3218 3218 HOH HOH A . B 2 HOH 64 3224 3224 HOH HOH A . B 2 HOH 65 3233 3233 HOH HOH A . B 2 HOH 66 3237 3237 HOH HOH A . B 2 HOH 67 3239 3239 HOH HOH A . B 2 HOH 68 3243 3243 HOH HOH A . B 2 HOH 69 3245 3245 HOH HOH A . B 2 HOH 70 3250 3250 HOH HOH A . B 2 HOH 71 3251 3251 HOH HOH A . B 2 HOH 72 3252 3252 HOH HOH A . B 2 HOH 73 3253 3253 HOH HOH A . B 2 HOH 74 3260 3260 HOH HOH A . B 2 HOH 75 3261 3261 HOH HOH A . B 2 HOH 76 3270 3270 HOH HOH A . B 2 HOH 77 3272 3272 HOH HOH A . B 2 HOH 78 3275 3275 HOH HOH A . B 2 HOH 79 3276 3276 HOH HOH A . B 2 HOH 80 3279 3279 HOH HOH A . B 2 HOH 81 3280 3280 HOH HOH A . B 2 HOH 82 3283 3283 HOH HOH A . B 2 HOH 83 3284 3284 HOH HOH A . B 2 HOH 84 3286 3286 HOH HOH A . B 2 HOH 85 3287 3287 HOH HOH A . B 2 HOH 86 3288 3288 HOH HOH A . B 2 HOH 87 3289 3289 HOH HOH A . B 2 HOH 88 3293 3293 HOH HOH A . B 2 HOH 89 3295 3295 HOH HOH A . B 2 HOH 90 3300 3300 HOH HOH A . B 2 HOH 91 3309 3309 HOH HOH A . B 2 HOH 92 3310 3310 HOH HOH A . B 2 HOH 93 3315 3315 HOH HOH A . B 2 HOH 94 3317 3317 HOH HOH A . B 2 HOH 95 3318 3318 HOH HOH A . B 2 HOH 96 3320 3320 HOH HOH A . B 2 HOH 97 3321 3321 HOH HOH A . B 2 HOH 98 3322 3322 HOH HOH A . B 2 HOH 99 3323 3323 HOH HOH A . B 2 HOH 100 3324 3324 HOH HOH A . B 2 HOH 101 3325 3325 HOH HOH A . B 2 HOH 102 3326 3326 HOH HOH A . B 2 HOH 103 3327 3327 HOH HOH A . B 2 HOH 104 3328 3328 HOH HOH A . B 2 HOH 105 3329 3329 HOH HOH A . B 2 HOH 106 3330 3330 HOH HOH A . B 2 HOH 107 3331 3331 HOH HOH A . B 2 HOH 108 3332 3332 HOH HOH A . B 2 HOH 109 3333 3333 HOH HOH A . B 2 HOH 110 3334 3334 HOH HOH A . B 2 HOH 111 3335 3335 HOH HOH A . B 2 HOH 112 3336 3336 HOH HOH A . B 2 HOH 113 3337 3337 HOH HOH A . B 2 HOH 114 3338 3338 HOH HOH A . B 2 HOH 115 3339 3339 HOH HOH A . B 2 HOH 116 3340 3340 HOH HOH A . B 2 HOH 117 3341 3341 HOH HOH A . B 2 HOH 118 3342 3342 HOH HOH A . B 2 HOH 119 3343 3343 HOH HOH A . B 2 HOH 120 3344 3344 HOH HOH A . B 2 HOH 121 3345 3345 HOH HOH A . B 2 HOH 122 3346 3346 HOH HOH A . B 2 HOH 123 3347 3347 HOH HOH A . B 2 HOH 124 3348 3348 HOH HOH A . B 2 HOH 125 3349 3349 HOH HOH A . B 2 HOH 126 3350 3350 HOH HOH A . B 2 HOH 127 3351 3351 HOH HOH A . B 2 HOH 128 3352 3352 HOH HOH A . B 2 HOH 129 3353 3353 HOH HOH A . B 2 HOH 130 3354 3354 HOH HOH A . B 2 HOH 131 3355 3355 HOH HOH A . B 2 HOH 132 3356 3356 HOH HOH A . B 2 HOH 133 3357 3357 HOH HOH A . B 2 HOH 134 3358 3358 HOH HOH A . B 2 HOH 135 3359 3359 HOH HOH A . B 2 HOH 136 3360 3360 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 36 A MSE 36 ? MET SELENOMETHIONINE 2 A MSE 68 A MSE 68 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3530 ? 1 MORE -7 ? 1 'SSA (A^2)' 10120 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 53.0760000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 36.7000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-04-25 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' # loop_ _diffrn_reflns.diffrn_id _diffrn_reflns.pdbx_d_res_high _diffrn_reflns.pdbx_d_res_low _diffrn_reflns.pdbx_number_obs _diffrn_reflns.pdbx_Rmerge_I_obs _diffrn_reflns.pdbx_Rsym_value _diffrn_reflns.pdbx_chi_squared _diffrn_reflns.av_sigmaI_over_netI _diffrn_reflns.pdbx_redundancy _diffrn_reflns.pdbx_percent_possible_obs _diffrn_reflns.number _diffrn_reflns.pdbx_observed_criterion _diffrn_reflns.limit_h_max _diffrn_reflns.limit_h_min _diffrn_reflns.limit_k_max _diffrn_reflns.limit_k_min _diffrn_reflns.limit_l_max _diffrn_reflns.limit_l_min 1 2.100 20.000 13100 0.105 ? 1.04 18.50 8.10 96.90 106759 ? ? ? ? ? ? ? 2 2.100 20.000 12803 0.103 ? 1.02 19.00 8.20 96.90 104618 ? ? ? ? ? ? ? 3 2.100 20.000 13200 0.109 ? 1.06 17.40 8.10 97.00 106284 ? ? ? ? ? ? ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 5.15 20.00 911 ? 0.066 ? 1.028 8.40 99.70 1 4.10 5.15 896 ? 0.075 ? 0.964 8.70 99.80 1 3.59 4.10 863 ? 0.086 ? 0.957 6.20 94.50 1 3.26 3.59 892 ? 0.093 ? 0.895 8.70 100.00 1 3.03 3.26 916 ? 0.100 ? 1.072 9.00 100.00 1 2.85 3.03 874 ? 0.110 ? 0.977 8.90 100.00 1 2.71 2.85 903 ? 0.137 ? 1.100 8.90 100.00 1 2.59 2.71 921 ? 0.166 ? 0.886 8.80 100.00 1 2.49 2.59 888 ? 0.187 ? 1.057 8.90 100.00 1 2.40 2.49 899 ? 0.207 ? 1.093 8.90 100.00 1 2.33 2.40 909 ? 0.247 ? 1.068 8.80 100.00 1 2.26 2.33 729 ? 0.308 ? 1.178 5.60 81.00 1 2.20 2.26 732 ? 0.299 ? 1.287 4.70 79.00 1 2.15 2.20 864 ? 0.312 ? 1.130 8.40 100.00 1 2.10 2.15 903 ? 0.353 ? 1.145 8.10 100.00 2 5.15 20.00 888 ? 0.066 ? 1.037 8.50 99.70 2 4.10 5.15 881 ? 0.073 ? 0.947 8.70 99.90 2 3.59 4.10 837 ? 0.085 ? 0.941 6.60 94.90 2 3.26 3.59 889 ? 0.092 ? 0.858 8.30 99.40 2 3.03 3.26 871 ? 0.098 ? 1.057 8.90 100.00 2 2.85 3.03 867 ? 0.106 ? 0.905 8.90 100.00 2 2.71 2.85 894 ? 0.132 ? 1.067 8.90 100.00 2 2.59 2.71 874 ? 0.159 ? 0.860 8.80 100.00 2 2.49 2.59 891 ? 0.175 ? 1.007 9.00 100.00 2 2.40 2.49 898 ? 0.200 ? 1.082 8.90 100.00 2 2.33 2.40 865 ? 0.230 ? 1.068 8.80 100.00 2 2.26 2.33 772 ? 0.323 ? 1.112 7.20 88.40 2 2.20 2.26 615 ? 0.284 ? 1.175 2.90 70.30 2 2.15 2.20 894 ? 0.334 ? 1.193 8.10 99.90 2 2.10 2.15 867 ? 0.318 ? 1.139 8.40 100.00 3 5.15 20.00 920 ? 0.070 ? 1.171 8.30 99.80 3 4.10 5.15 901 ? 0.075 ? 0.993 8.70 100.00 3 3.59 4.10 868 ? 0.089 ? 0.998 6.20 94.30 3 3.26 3.59 902 ? 0.093 ? 0.872 8.70 100.00 3 3.03 3.26 899 ? 0.102 ? 1.089 8.80 100.00 3 2.85 3.03 909 ? 0.111 ? 0.973 8.80 100.00 3 2.71 2.85 896 ? 0.143 ? 1.134 8.80 100.00 3 2.59 2.71 927 ? 0.173 ? 0.916 8.70 100.00 3 2.49 2.59 906 ? 0.195 ? 1.055 8.70 100.00 3 2.40 2.49 890 ? 0.215 ? 1.102 8.60 100.00 3 2.33 2.40 908 ? 0.263 ? 1.055 8.60 100.00 3 2.26 2.33 739 ? 0.337 ? 1.241 5.30 81.20 3 2.20 2.26 742 ? 0.351 ? 1.221 5.20 79.60 3 2.15 2.20 862 ? 0.339 ? 1.140 8.30 100.00 3 2.10 2.15 931 ? 0.396 ? 1.193 7.90 100.00 # _pdbx_phasing_dm.entry_id 2GO8 _pdbx_phasing_dm.fom_acentric 0.680 _pdbx_phasing_dm.fom_centric 0.790 _pdbx_phasing_dm.fom 0.700 _pdbx_phasing_dm.reflns_acentric 3137 _pdbx_phasing_dm.reflns_centric 617 _pdbx_phasing_dm.reflns 3754 # loop_ _pdbx_phasing_dm_shell.d_res_high _pdbx_phasing_dm_shell.d_res_low _pdbx_phasing_dm_shell.delta_phi_final _pdbx_phasing_dm_shell.delta_phi_initial _pdbx_phasing_dm_shell.fom_acentric _pdbx_phasing_dm_shell.fom_centric _pdbx_phasing_dm_shell.fom _pdbx_phasing_dm_shell.reflns_acentric _pdbx_phasing_dm_shell.reflns_centric _pdbx_phasing_dm_shell.reflns 7.400 19.927 ? ? 1.090 1.890 1.390 111 67 178 4.600 7.400 ? ? 0.900 0.820 0.880 406 124 530 3.700 4.600 ? ? 0.860 0.840 0.850 518 112 630 3.300 3.700 ? ? 0.770 0.860 0.780 532 89 621 2.800 3.300 ? ? 0.590 0.480 0.580 972 144 1116 2.600 2.800 ? ? 0.390 0.250 0.370 598 81 679 # _phasing.method MAD # _phasing_MAD_clust.id 1 _phasing_MAD_clust.expt_id '3 wavelength' _phasing_MAD_clust.number_set ? # _phasing_MAD_expt.id '3 wavelength' _phasing_MAD_expt.mean_fom ? # loop_ _phasing_MAD_set.clust_id _phasing_MAD_set.expt_id _phasing_MAD_set.set_id _phasing_MAD_set.wavelength _phasing_MAD_set.pdbx_f_prime_refined _phasing_MAD_set.pdbx_f_double_prime_refined 1 '3 wavelength' 1 0.9791 -8.01 5.09 1 '3 wavelength' 2 0.9794 -7.20 1.92 1 '3 wavelength' 3 0.9678 -4.94 3.29 # loop_ _phasing_set.id _phasing_set.pdbx_d_res_high _phasing_set.pdbx_d_res_low 1 . . 2 . . 3 . . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 SOLVE 2.08 14-Sept-2004 package 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 RESOLVE 2.08 14-Sept-2004 package 'Terwilliger, T. C' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 4 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 5 PDB_EXTRACT 1.701 'Nov. 1, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 ADSC . ? ? ? ? 'data collection' ? ? ? 7 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE2 A GLU 54 ? ? O A HOH 3035 ? ? 2.09 2 1 O A PRO 12 ? ? O A HOH 3129 ? ? 2.19 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 NH1 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 ARG _pdbx_validate_symm_contact.auth_seq_id_1 106 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 OE2 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 GLU _pdbx_validate_symm_contact.auth_seq_id_2 110 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_555 _pdbx_validate_symm_contact.dist 2.11 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A GLU 31 ? ? CA A GLU 31 ? ? C A GLU 31 ? ? 91.29 111.00 -19.71 2.70 N 2 1 C A GLU 31 ? ? N A THR 32 ? ? CA A THR 32 ? ? 106.37 121.70 -15.33 2.50 Y 3 1 CA A LEU 39 ? ? CB A LEU 39 ? ? CG A LEU 39 ? ? 129.91 115.30 14.61 2.30 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 56 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -65.93 _pdbx_validate_torsion.psi 1.21 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A MSE 2 ? A MSE 2 3 1 Y 1 A GLU 24 ? A GLU 24 4 1 Y 1 A ASN 25 ? A ASN 25 5 1 Y 1 A ASP 26 ? A ASP 26 6 1 Y 1 A THR 27 ? A THR 27 7 1 Y 1 A GLY 28 ? A GLY 28 8 1 Y 1 A TYR 29 ? A TYR 29 9 1 Y 1 A GLU 79 ? A GLU 79 10 1 Y 1 A HIS 80 ? A HIS 80 11 1 Y 1 A GLN 81 ? A GLN 81 12 1 Y 1 A ALA 82 ? A ALA 82 13 1 Y 1 A ALA 83 ? A ALA 83 14 1 Y 1 A LYS 84 ? A LYS 84 15 1 Y 1 A GLU 85 ? A GLU 85 16 1 Y 1 A LYS 86 ? A LYS 86 17 1 Y 1 A GLY 87 ? A GLY 87 18 1 Y 1 A ARG 88 ? A ARG 88 19 1 Y 1 A SER 89 ? A SER 89 20 1 Y 1 A VAL 90 ? A VAL 90 21 1 Y 1 A TRP 91 ? A TRP 91 22 1 Y 1 A ASN 111 ? A ASN 111 23 1 Y 1 A THR 112 ? A THR 112 24 1 Y 1 A ASN 113 ? A ASN 113 25 1 Y 1 A ASP 114 ? A ASP 114 26 1 Y 1 A LEU 115 ? A LEU 115 27 1 Y 1 A GLU 116 ? A GLU 116 28 1 Y 1 A HIS 117 ? A HIS 117 29 1 Y 1 A HIS 118 ? A HIS 118 30 1 Y 1 A HIS 119 ? A HIS 119 31 1 Y 1 A HIS 120 ? A HIS 120 32 1 Y 1 A HIS 121 ? A HIS 121 33 1 Y 1 A HIS 122 ? A HIS 122 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #